AT4G16700

Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
9395621 .. 9398439
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G16700.1

Sequence Viewer

Length: 1362 bp
ATGAAACCTCGTTTTCCTCAAAATGTCTATTTTTTGGCTCGCTATTCATATCTCCGCCGCTTTCAGCATAGTCAACGTCGAACCTTCAGCTCTTTCCTCAACAATATCCGTTCGAATTATTCCGGTGCTCGTGCTTCGCCTCTCGGCGGCAGCAGCGGAGCCGGAGCCGGAGCCGGAGGAGGTGGAACCGGAGATTCCAAAGGCAATGCTTTTCTTGTGCCCGGAGCAACAATGGCTACTATCCTTATGCTTGGAGCTCTTCATGCTCGCCGCCTCTATGAAGACAAGAAGATCGAAGAGAAACGGGAGAAGGGAATCGAACTTGAGTTCCACCCAGATATCAAAGCCTCGTTCCTTGGAGTTCTGCCTCTGCGATCAATCTCAAGAGCTTGGGGCTCCTTTATGAGTCTGGAAATTCCGGTGTGGATGCGTCCATATGCTTATAAAGCCTGGGCTCGAGCTTTCCATTCAAATCTTGAAGAAGCAGCTCTGCCTCTTGAAGAATATACTTCATTGCAGGATTTCTTTGTTCGTAGCTTGAAAGAAGGTTGCAGGCCTATCGACCCTGATCCTTGTTGTCTGGTTAGTCCTGTGGATGGCACCGTTCTAAGGTTTGGGGAGTTAAAAGGGAATAGAGGGATGATCGAGCAAGTTAAAGGACATTCTTACTCGGTACCAGCTCTTCTAGGAAATAACTCTCTGCTTCCCATGGAACCTGAAGGTAAGAATGAGTCTAAGGAAGAAGCTGTTGGAGATAAGAGCGACAAATCTTGGTTGAGAGTCTCTTTGGCATCTCCAAAATTACGGGAGAACGTCTCAGCCAGTCCAATGAAGGGGCTCTATTATTGTGTAATATACCTAAAACCAGGGGATTATCATCGAATACACTCTCCGGCTGACTGGAATGCAACTGTTCGTCGACACTTTGCAGGCCGGTTGTTTCCTGTGAACGAGCGTGCTACAAGAACGATAAGGAATCTCTATGTCGAGAATGAAAGGGTTGTGCTAGAAGGGATATGGAAAGAAGGTTTTATGGCACTTGCTGCTGTAGGCGCGACCAACATTGGATCCATTGAGCTTTTCATTGAACCTGAGCTAAGAACAAACAAGCCAAAGAAGAAGCTATTTCCTACAGAGCCACCAGAGGAGCGGGTGTATGATCCAGAAGGTCTTGGCTTAAGGCTCGAGAAGGGGAAAGAGGTAGCTGTATTCAACATGGGATCAACCGTAGTGCTCATTTTTCAAGCACCAACCGCAAACACACCCGAGGGTTCAAGCAGTTCTTCAGATTACAGATTCTGTGTCAAACAAGGAGACAGAGTCCGCGTTGGACAAGCATTGGGAAGATGGAAAGAGGAATGA

Protein Analysis

453

Amino Acids

50.56

Weight (kDa)

9.33

Isoelectric Point (pI)

51.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PS_Dcarbxylase PF02666 172 - 448 6.2e-54 Phosphatidylserine decarboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013544)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 444
Acc65I GGTACC 1 cut(s) 673
AccB1I GGYRCC 2 cut(s) 599, 673
AccBSI CCGCTC 1 cut(s) 1150
AccI GTMKAC 1 cut(s) 919
AccII CGCG 2 cut(s) 1055, 1326
AciI CCGC 8 cut(s) 55, 58, 147, 156, 271, 1150, 1254, 1324
AclWI GGATC 5 cut(s) 563, 1062, 1075, 1154, 1228
AcsI RAATTY 1 cut(s) 414
AcuI CTGAAG 3 cut(s) 70, 738, 1269
AfaI GTAC 1 cut(s) 675
AfiI CCNNNNNNNGG 4 cut(s) 146, 596, 609, 833
AflII CTTAAG 1 cut(s) 1177
AgsI TTSAA 8 cut(s) 471, 479, 500, 541, 1088, 1213, 1244, 1275
AjnI CCWGG 2 cut(s) 449, 865
AjuI GAANNNNNNNTTGG 2 cut(s) 732, 764
AloI GAACNNNNNNTCC 2 cut(s) 312, 344
Alw21I GWGCWC 3 cut(s) 130, 259, 1236
Alw26I GTCTC 3 cut(s) 787, 820, 1308
AlwI GGATC 5 cut(s) 563, 1062, 1075, 1154, 1228
AlwNI CAGNNNCTG 1 cut(s) 1299
Ama87I CYCGRG 3 cut(s) 456, 1184, 1265
AoxI GGCC 2 cut(s) 554, 931
ApeKI GCWGC 4 cut(s) 150, 153, 485, 1043
ApoI RAATTY 1 cut(s) 414
Asp718I GGTACC 1 cut(s) 673
AspLEI GCGC 1 cut(s) 1055
AsuC2I CCSGG 1 cut(s) 222
AsuII TTCGAA 1 cut(s) 113
AvaI CYCGRG 3 cut(s) 456, 1184, 1265
BaeGI GKGCMC 1 cut(s) 222
BamHI GGATCC 1 cut(s) 1067
BanI GGYRCC 2 cut(s) 599, 673
BanII GRGCYC 4 cut(s) 259, 398, 457, 840
BarI GAAGNNNNNNTAC 2 cut(s) 666, 698
BauI CACGAG 1 cut(s) 129
BbsI GAAGAC 1 cut(s) 288
Bbv12I GWGCWC 3 cut(s) 130, 259, 1236
BbvI GCAGC 4 cut(s) 162, 165, 497, 1030
BccI CCATC 2 cut(s) 590, 1341
BcgI CGANNNNNNTGC 2 cut(s) 541, 575
BciT130I CCWGG 2 cut(s) 451, 867
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 3 cut(s) 787, 820, 1308
BfaI CTAG 2 cut(s) 686, 1007
BfmI CTRYAG 2 cut(s) 1047, 1131
BfrI CTTAAG 1 cut(s) 1177
BisI GCNGC 7 cut(s) 58, 148, 151, 154, 271, 486, 1044
BlsI GCNGC 7 cut(s) 59, 149, 152, 155, 272, 487, 1045
Bme1390I CCNGG 3 cut(s) 222, 451, 867
BmeT110I CYCGRG 3 cut(s) 456, 1184, 1265
BmiI GGNNCC 9 cut(s) 160, 166, 172, 187, 397, 601, 675, 714, 1069
BmrFI CCNGG 3 cut(s) 222, 451, 867
BmsI GCATC 2 cut(s) 417, 800
BpiI GAAGAC 1 cut(s) 288
BplI GAGNNNNNCTC 2 cut(s) 800, 832
Bpu10I CCTNAGC 1 cut(s) 1092
Bpu14I TTCGAA 1 cut(s) 113
BpuEI CTTGAG 2 cut(s) 344, 367
BpuMI CCSGG 1 cut(s) 222
BsaBI GATNNNNATC 1 cut(s) 876
BsaJI CCNNGG 5 cut(s) 355, 450, 708, 866, 1266
BsaWI WCCGGW 3 cut(s) 122, 188, 418
BsaXI ACNNNNNCTCC 4 cut(s) 1139, 1169, 1305, 1335
Bsc4I CCNNNNNNNGG 4 cut(s) 146, 596, 609, 833
Bse118I RCCGGY 1 cut(s) 933
Bse1I ACTGG 2 cut(s) 822, 905
Bse3DI GCAATG 2 cut(s) 211, 512
Bse8I GATNNNNATC 1 cut(s) 876
BseBI CCWGG 2 cut(s) 451, 867
BseDI CCNNGG 5 cut(s) 355, 450, 708, 866, 1266
BseGI GGATG 3 cut(s) 432, 601, 645
BseJI GATNNNNATC 1 cut(s) 876
BseLI CCNNNNNNNGG 4 cut(s) 146, 596, 609, 833
BseMI GCAATG 2 cut(s) 211, 512
BseMII CTCAG 2 cut(s) 831, 1083
BseNI ACTGG 2 cut(s) 822, 905
BseRI GAGGAG 2 cut(s) 192, 1160
BseSI GKGCMC 1 cut(s) 222
BseXI GCAGC 4 cut(s) 162, 165, 497, 1030
Bsh1236I CGCG 2 cut(s) 1055, 1326
BshFI GGCC 2 cut(s) 556, 933
BshNI GGYRCC 2 cut(s) 599, 673
BsiHKAI GWGCWC 3 cut(s) 130, 259, 1236
BsiHKCI CYCGRG 3 cut(s) 456, 1184, 1265
BsiSI CCGG 9 cut(s) 123, 162, 168, 174, 189, 222, 419, 893, 934
BslI CCNNNNNNNGG 4 cut(s) 146, 596, 609, 833
BsmAI GTCTC 3 cut(s) 787, 820, 1308
BsmBI CGTCTC 1 cut(s) 820
BsmI GAATGC 1 cut(s) 910
BsnI GGCC 2 cut(s) 556, 933
BsoBI CYCGRG 3 cut(s) 456, 1184, 1265
Bsp119I TTCGAA 1 cut(s) 113
Bsp1286I GDGCHC 7 cut(s) 130, 222, 259, 398, 457, 840, 1236
Bsp143I GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
Bsp19I CCATGG 1 cut(s) 708
BspACI CCGC 8 cut(s) 55, 58, 147, 156, 271, 1150, 1254, 1324
BspANI GGCC 2 cut(s) 556, 933
BspCNI CTCAG 2 cut(s) 830, 1084
BspFNI CGCG 2 cut(s) 1055, 1326
BspLI GGNNCC 9 cut(s) 160, 166, 172, 187, 397, 601, 675, 714, 1069
BspPI GGATC 5 cut(s) 563, 1062, 1075, 1154, 1228
BspQI GCTCTTC 2 cut(s) 264, 687
BspT104I TTCGAA 1 cut(s) 113
BspT107I GGYRCC 2 cut(s) 599, 673
BspTI CTTAAG 1 cut(s) 1177
BsrBI CCGCTC 1 cut(s) 1150
BsrDI GCAATG 2 cut(s) 211, 512
BsrFI RCCGGY 1 cut(s) 933
BsrI ACTGG 2 cut(s) 822, 905
BssAI RCCGGY 1 cut(s) 933
BssECI CCNNGG 5 cut(s) 355, 450, 708, 866, 1266
BssMI GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
BssSI CACGAG 1 cut(s) 129
BssT1I CCWWGG 2 cut(s) 355, 708
Bst2BI CACGAG 1 cut(s) 129
Bst2UI CCWGG 2 cut(s) 451, 867
Bst4CI ACNGT 3 cut(s) 604, 913, 1228
Bst6I CTCTTC 3 cut(s) 264, 291, 687
BstAFI CTTAAG 1 cut(s) 1177
BstAPI GCANNNNNTGC 1 cut(s) 1043
BstBI TTCGAA 1 cut(s) 113
BstC8I GCNNGC 5 cut(s) 40, 268, 554, 931, 957
BstDEI CTNAG 5 cut(s) 608, 735, 817, 1092, 1097
BstDSI CCRYGG 1 cut(s) 708
BstF5I GGATG 3 cut(s) 432, 601, 645
BstFNI CGCG 2 cut(s) 1055, 1326
BstHHI GCGC 1 cut(s) 1055
BstKTI GATC 7 cut(s) 294, 377, 571, 645, 1070, 1162, 1223
BstMAI GTCTC 3 cut(s) 787, 820, 1308
BstMBI GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
BstMWI GCNNNNNNNGC 7 cut(s) 153, 233, 263, 446, 1043, 1052, 1253
BstNI CCWGG 2 cut(s) 451, 867
BstSCI CCNGG 3 cut(s) 220, 449, 865
BstSFI CTRYAG 2 cut(s) 1047, 1131
BstSLI GKGCMC 1 cut(s) 222
BstUI CGCG 2 cut(s) 1055, 1326
BstV1I GCAGC 4 cut(s) 162, 165, 497, 1030
BstV2I GAAGAC 1 cut(s) 288
BstX2I RGATCY 1 cut(s) 1067
BstYI RGATCY 1 cut(s) 1067
BsuRI GGCC 2 cut(s) 556, 933
BtgI CCRYGG 1 cut(s) 708
BtsCI GGATG 3 cut(s) 432, 601, 645
Cac8I GCNNGC 5 cut(s) 40, 268, 554, 931, 957
CaiI CAGNNNCTG 1 cut(s) 1299
CfoI GCGC 1 cut(s) 1055
Cfr10I RCCGGY 1 cut(s) 933
CseI GACGC 1 cut(s) 419
Csp6I GTAC 1 cut(s) 674
CviAII CATG 3 cut(s) 263, 709, 1216
CviQI GTAC 1 cut(s) 674
DdeI CTNAG 5 cut(s) 608, 735, 817, 1092, 1097
DpnI GATC 7 cut(s) 293, 376, 570, 644, 1069, 1161, 1222
DpnII GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
Eam1104I CTCTTC 3 cut(s) 264, 291, 687
EarI CTCTTC 3 cut(s) 264, 291, 687
EciI GGCGGA 1 cut(s) 44
Ecl136II GAGCTC 1 cut(s) 257
Eco130I CCWWGG 2 cut(s) 355, 708
Eco147I AGGCCT 1 cut(s) 556
Eco24I GRGCYC 4 cut(s) 259, 398, 457, 840
Eco32I GATATC 1 cut(s) 340
Eco53kI GAGCTC 1 cut(s) 257
Eco57I CTGAAG 3 cut(s) 70, 738, 1269
Eco88I CYCGRG 3 cut(s) 456, 1184, 1265
EcoICRI GAGCTC 1 cut(s) 257
EcoRII CCWGG 2 cut(s) 449, 865
EcoRV GATATC 1 cut(s) 340
EcoT14I CCWWGG 2 cut(s) 355, 708
EcoT38I GRGCYC 4 cut(s) 259, 398, 457, 840
ErhI CCWWGG 2 cut(s) 355, 708
Esp3I CGTCTC 1 cut(s) 820
FaeI CATG 3 cut(s) 266, 712, 1219
FalI AAGNNNNNCTT 2 cut(s) 1267, 1299
FatI CATG 3 cut(s) 262, 708, 1215
FauI CCCGC 1 cut(s) 1143
FauNDI CATATG 1 cut(s) 436
FblI GTMKAC 1 cut(s) 919
Fnu4HI GCNGC 7 cut(s) 58, 148, 151, 154, 271, 486, 1044
FokI GGATG 3 cut(s) 439, 608, 652
FriOI GRGCYC 4 cut(s) 259, 398, 457, 840
Fsp4HI GCNGC 7 cut(s) 58, 148, 151, 154, 271, 486, 1044
FspBI CTAG 2 cut(s) 686, 1007
GlaI GCGC 1 cut(s) 1054
GluI GCNGC 7 cut(s) 58, 148, 151, 154, 271, 486, 1044
HaeIII GGCC 2 cut(s) 556, 933
HapII CCGG 9 cut(s) 123, 162, 168, 174, 189, 222, 419, 893, 934
HgaI GACGC 1 cut(s) 419
HhaI GCGC 1 cut(s) 1055
Hin1II CATG 3 cut(s) 266, 712, 1219
Hin6I GCGC 1 cut(s) 1053
HinP1I GCGC 1 cut(s) 1053
HincII GTYRAC 2 cut(s) 74, 920
HindII GTYRAC 2 cut(s) 74, 920
HinfI GANTC 8 cut(s) 194, 315, 406, 731, 780, 976, 1296, 1320
HpaII CCGG 9 cut(s) 123, 162, 168, 174, 189, 222, 419, 893, 934
Hpy166II GTNNAC 3 cut(s) 74, 920, 949
Hpy188I TCNGA 1 cut(s) 1288
Hpy188III TCNNGA 7 cut(s) 384, 410, 476, 497, 988, 1163, 1186
Hpy8I GTNNAC 3 cut(s) 74, 920, 949
Hpy99I CGWCG 2 cut(s) 81, 921
HpyAV CCTTC 9 cut(s) 94, 304, 539, 713, 826, 1004, 1019, 1160, 1183
HpyCH4III ACNGT 3 cut(s) 604, 913, 1228
HpyCH4IV ACGT 2 cut(s) 76, 813
HpyCH4V TGCA 4 cut(s) 517, 552, 908, 929
HpyF10VI GCNNNNNNNGC 7 cut(s) 153, 233, 263, 446, 1043, 1052, 1253
HpyF3I CTNAG 5 cut(s) 608, 735, 817, 1092, 1097
HpySE526I ACGT 2 cut(s) 76, 813
Hsp92II CATG 3 cut(s) 266, 712, 1219
HspAI GCGC 1 cut(s) 1053
KpnI GGTACC 1 cut(s) 677
Kzo9I GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
LguI GCTCTTC 2 cut(s) 264, 687
LmnI GCTCC 7 cut(s) 158, 164, 170, 224, 254, 401, 1147
Lsp1109I GCAGC 4 cut(s) 162, 165, 497, 1030
LweI GCATC 2 cut(s) 417, 800
MaeI CTAG 2 cut(s) 686, 1007
MaeII ACGT 2 cut(s) 76, 813
MalI GATC 7 cut(s) 293, 376, 570, 644, 1069, 1161, 1222
MbiI CCGCTC 1 cut(s) 1150
MboI GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
MflI RGATCY 1 cut(s) 1067
MhlI GDGCHC 7 cut(s) 130, 222, 259, 398, 457, 840, 1236
MluCI AATT 3 cut(s) 115, 414, 800
MlyI GAGTC 4 cut(s) 415, 740, 789, 1329
MmeI TCCRAC 2 cut(s) 730, 1309
MseI TTAA 3 cut(s) 623, 654, 1178
MspA1I CMGCKG 1 cut(s) 156
MspCI CTTAAG 1 cut(s) 1177
MspI CCGG 9 cut(s) 123, 162, 168, 174, 189, 222, 419, 893, 934
MspR9I CCNGG 3 cut(s) 222, 451, 867
Mva1269I GAATGC 1 cut(s) 910
MvaI CCWGG 2 cut(s) 451, 867
MvnI CGCG 2 cut(s) 1055, 1326
MwoI GCNNNNNNNGC 7 cut(s) 153, 233, 263, 446, 1043, 1052, 1253
NciI CCSGG 1 cut(s) 222
NcoI CCATGG 1 cut(s) 708
NdeI CATATG 1 cut(s) 436
NdeII GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
NlaIII CATG 3 cut(s) 266, 712, 1219
NlaIV GGNNCC 9 cut(s) 160, 166, 172, 187, 397, 601, 675, 714, 1069
NmeAIII GCCGAG 1 cut(s) 123
NspV TTCGAA 1 cut(s) 113
PaeR7I CTCGAG 2 cut(s) 456, 1184
PceI AGGCCT 1 cut(s) 556
PciSI GCTCTTC 2 cut(s) 264, 687
PctI GAATGC 1 cut(s) 910
PfeI GAWTC 4 cut(s) 194, 315, 976, 1296
PflFI GACNNNGTC 1 cut(s) 1319
PkrI GCNGC 7 cut(s) 59, 149, 152, 155, 272, 487, 1045
PleI GAGTC 4 cut(s) 414, 739, 788, 1328
PpsI GAGTC 4 cut(s) 414, 739, 788, 1328
PsiI TTATAA 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 259
Psp6I CCWGG 2 cut(s) 449, 865
PspGI CCWGG 2 cut(s) 449, 865
PspN4I GGNNCC 9 cut(s) 160, 166, 172, 187, 397, 601, 675, 714, 1069
PspXI VCTCGAGB 1 cut(s) 456
PstNI CAGNNNCTG 1 cut(s) 1299
PsuI RGATCY 1 cut(s) 1067
PsyI GACNNNGTC 1 cut(s) 1319
RsaI GTAC 1 cut(s) 675
RsaNI GTAC 1 cut(s) 674
SacI GAGCTC 1 cut(s) 259
SalI GTCGAC 1 cut(s) 918
SapI GCTCTTC 2 cut(s) 264, 687
SaqAI TTAA 3 cut(s) 623, 654, 1178
SatI GCNGC 7 cut(s) 58, 148, 151, 154, 271, 486, 1044
Sau3AI GATC 7 cut(s) 291, 374, 568, 642, 1067, 1159, 1220
SchI GAGTC 4 cut(s) 415, 740, 789, 1329
ScrFI CCNGG 3 cut(s) 222, 451, 867
SduI GDGCHC 7 cut(s) 130, 222, 259, 398, 457, 840, 1236
SfaNI GCATC 2 cut(s) 417, 800
SfcI CTRYAG 2 cut(s) 1047, 1131
Sfr274I CTCGAG 2 cut(s) 456, 1184
SfuI TTCGAA 1 cut(s) 113
SlaI CTCGAG 2 cut(s) 456, 1184
SmlI CTYRAG 5 cut(s) 323, 382, 456, 1177, 1184
SmoI CTYRAG 5 cut(s) 323, 382, 456, 1177, 1184
Sse9I AATT 3 cut(s) 115, 414, 800
SseBI AGGCCT 1 cut(s) 556
SsiI CCGC 8 cut(s) 55, 58, 147, 156, 271, 1150, 1254, 1324
SspMI CTAG 2 cut(s) 686, 1007
SstI GAGCTC 1 cut(s) 259
StuI AGGCCT 1 cut(s) 556
StyD4I CCNGG 3 cut(s) 220, 449, 865
StyI CCWWGG 2 cut(s) 355, 708
TaaI ACNGT 3 cut(s) 604, 913, 1228
TaiI ACGT 2 cut(s) 79, 816
TasI AATT 3 cut(s) 115, 414, 800
TauI GCSGC 3 cut(s) 60, 150, 273
TfiI GAWTC 4 cut(s) 194, 315, 976, 1296
Tru1I TTAA 3 cut(s) 623, 654, 1178
Tru9I TTAA 3 cut(s) 623, 654, 1178
TseI GCWGC 4 cut(s) 150, 153, 485, 1043
TspDTI ATGAA 8 cut(s) 17, 36, 251, 294, 501, 845, 1008, 1072
TspGWI ACGGA 1 cut(s) 98
Tth111I GACNNNGTC 1 cut(s) 1319
Vha464I CTTAAG 1 cut(s) 1177
XapI RAATTY 1 cut(s) 414
XhoI CTCGAG 2 cut(s) 456, 1184
XmiI GTMKAC 1 cut(s) 919
XspI CTAG 2 cut(s) 686, 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.