Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0013544

Physical Location & Seq

Genomic Coordinates Forward (+)

8132114 .. 8137398

Gene Structure 5285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G066800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGAAGTTTAGGGCTTCACATAGAGTCTGTATATTCTCTCACTCTACACACCTCAATTCCCTCCATAACCAGCGACGATGCTTCGCTTCATTTCTTAAAAAACTCCATAAAACCCCTCAAGCTCGCTCCTTTTCCAATGGCGGAGGTGGTGGTTCTAAAGGTGATTCTTTTCTCTTGCCTGGTGCAACGGTGGCTACTTTGCTTATGCTTGGTGCTCTGCATGTTCGTCGGATGTATGATGACAGGAAGGTTGAGGAGGCACTGGAGAAGGGAACGGAATTTGAATTTCAACCTGATGTAAAATCTACATTTTTAAGATTGCTGCCTTTGCGCTCCATTTCCAGATGTTGGGGTTTATTGACCAGTGTGGAAATCCCAGTCTCTCTACGTCCGTATGTTTATGGAGCGTGGGCTCGAGCATTCCATTCAAACTTGGAAGAAGCAGCTCTCCCTCTGGATGAATACACATCTTTACGAGAGTTCTTTGTTCGCACCTTGAAAGAAGGTTCCAGGCCTATTGACCCTGACCCACGATGTCTGGTTAGTCCTGTGGATGGTACTGTATTACGATTTGGGGAGCTTAGAGGAGCAGGGGCTATGATTGAGCAAGTCAAAGGTTTTTCTTATTCAGTTTTTTCCCTGCTCGGTGCAAGCTCATTTCTTCCTTTGATAGCTAAAGGAGATGTGCATGAGGAGAGTAGTGAACCAGAAAATGCTTCCAGGGAGAAGAGTAAGAAGTCATGGCTGAGAGTTTCATTGGCTTCTCCTAAAGTTTGGGACCCTGTATCAACATGTCCTATAAAAGGCCTCTTTTATTGTGTAATTTACTTGAAGCCTGGAGACTATCATCGCATACATGCACCAGCTGATTGGAATGTTCTTGTCCGCCGTCATTTTTCTGGTCGTCTGCTTCCTGTAAATGAACGTGCTACAAGAACTATCAGAAACCTATATGTTGAGAACGAACGGGTTGTGCTTGAAGGTTTATGGAAAGAAGGATTTATGGCACTTGCTGCTGTTGGAGCAACGAATATTGGTTCAATTGAGCTTTCCATTGAACCGGAACTTCGGACAAACCAGGCAAGAAAGAAGTTACTGCACTCAGAGCCTCCAGAAGAACGGATATATGAACCTGATGGTATTGGTAGGACGCTCAAGAAAGGAGATGAGGTAGCTGCATTCAACATGGGATCAACTGTTGTGCTTGTCTTCCAGGCTCCCATATCACTATCACAAGAAAATGGGGATTCCGCATCAGAGTTCAGGTTTTCGGTCCAACGTGGGGATAGAGTCCGTGTCGGGGAAGCCTTAGGGAGGTGGCGGGATCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004609 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006629 GO:0006644 GO:0006650 GO:0006656 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0010635 GO:0010636 GO:0010638 GO:0010821 GO:0010822 GO:0010954 GO:0016020 GO:0016021 GO:0016485 GO:0016540 GO:0016829 GO:0016830 GO:0016831 GO:0019222 GO:0019538 GO:0019637 GO:0019866 GO:0022603 GO:0030162 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031304 GO:0031305 GO:0031323 GO:0031325 GO:0031966 GO:0031967 GO:0031975 GO:0032268 GO:0032270 GO:0032592 GO:0033043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045017 GO:0045862 GO:0046470 GO:0046474 GO:0046486 GO:0048518 GO:0048522 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051604 GO:0060255 GO:0065007 GO:0070613 GO:0071704 GO:0080090 GO:0090407 GO:0097164 GO:0098573 GO:1901564 GO:1901566 GO:1901576 GO:1903317 GO:1903319

KEGG Pathways

Metabolic & Signaling

ko00564 ko01100 ko01110 map00564 map01100 map01110

Pfam Domains

Protein Families

PS_Dcarbxylase

Protein Analysis

444

Amino Acids

49.67

Weight (kDa)

9.27

Isoelectric Point (pI)

43.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013544)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16700 AT4G16700
fragaria_vesca	FvH4_5g19150
malus_domestica	MD06G1055900.v1.1
prunus_persica	Prupe.5G066800_v2.0.a1 Prupe.5G066800_v2.0.a1 Prupe.5G066800_v2.0.a1
pyrus_communis	pycom06g04690
rosa_chinensis	RchiOBHm_Chr7g0203641
rosa_laevigata	RLG00000003513
rosa_multiflora	Rmu_sc0019220.1_g000001
rosa_roxburghii	Rroxscaffold_3G00253620
rosa_rugosa	Rorug07G0077900
rosa_samantha	Rh5CG208900 Rh7BG206800 Rh7CG219800 Rh7DG214400
rosa_wichuraiana	Rw7G018090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	348
AciI	CCGC	4 cut(s)	141, 886, 1251, 1321
AclWI	GGATC	1 cut(s)	1198
AcsI	RAATTY	2 cut(s)	278, 284
AfaI	GTAC	1 cut(s)	559
AfiI	CCNNNNNNNGG	6 cut(s)	348, 554, 803, 1282, 1300, 1314
AflIII	ACRYGT	1 cut(s)	791
AgsI	TTSAA	9 cut(s)	284, 290, 429, 499, 832, 980, 1041, 1058, 1183
AjnI	CCWGG	6 cut(s)	178, 509, 719, 835, 1077, 1212
AluBI	AGCT	8 cut(s)	122, 446, 580, 654, 674, 866, 1048, 1175
AluI	AGCT	8 cut(s)	122, 446, 580, 654, 674, 866, 1048, 1175
Alw21I	GWGCWC	1 cut(s)	217
Alw26I	GTCTC	2 cut(s)	385, 834
AlwI	GGATC	1 cut(s)	1198
Ama87I	CYCGRG	1 cut(s)	414
AoxI	GGCC	2 cut(s)	512, 805
ApeKI	GCWGC	4 cut(s)	322, 443, 1013, 1175
ApoI	RAATTY	2 cut(s)	278, 284
AspLEI	GCGC	1 cut(s)	333
AspS9I	GGNCC	2 cut(s)	778, 1273
AsuHPI	GGTGA	1 cut(s)	173
AvaI	CYCGRG	1 cut(s)	414
AvaII	GGWCC	2 cut(s)	778, 1273
AxyI	CCTNAGG	1 cut(s)	1309
BanII	GRGCYC	1 cut(s)	415
BbsI	GAAGAC	1 cut(s)	1201
Bbv12I	GWGCWC	1 cut(s)	217
BbvI	GCAGC	4 cut(s)	309, 455, 1000, 1162
BccI	CCATC	2 cut(s)	548, 1130
BceAI	ACGGC	1 cut(s)	873
BcgI	CGANNNNNNTGC	2 cut(s)	209, 243
BciT130I	CCWGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
BcoDI	GTCTC	2 cut(s)	385, 834
BisI	GCNGC	4 cut(s)	323, 444, 1014, 1176
BlsI	GCNGC	4 cut(s)	324, 445, 1015, 1177
Bme1390I	CCNGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
Bme18I	GGWCC	2 cut(s)	778, 1273
BmeT110I	CYCGRG	1 cut(s)	414
BmgT120I	GGNCC	2 cut(s)	778, 1273
BmiI	GGNNCC	4 cut(s)	508, 779, 780, 1218
BmrFI	CCNGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
BmrI	ACTGGG	1 cut(s)	371
BmsI	GCATC	2 cut(s)	68, 1262
BmuI	ACTGGG	1 cut(s)	371
BpiI	GAAGAC	1 cut(s)	1201
BpmI	CTGGAG	3 cut(s)	284, 858, 1095
BpuEI	CTTGAG	2 cut(s)	102, 1139
BsaJI	CCNNGG	1 cut(s)	720
BsaWI	WCCGGW	1 cut(s)	1060
BsaXI	ACNNNNNCTCC	2 cut(s)	1155, 1185
Bsc4I	CCNNNNNNNGG	6 cut(s)	348, 554, 803, 1282, 1300, 1314
Bse1I	ACTGG	3 cut(s)	267, 363, 377
Bse21I	CCTNAGG	1 cut(s)	1309
BseBI	CCWGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
BseDI	CCNNGG	1 cut(s)	720
BseGI	GGATG	3 cut(s)	237, 463, 559
BseLI	CCNNNNNNNGG	6 cut(s)	348, 554, 803, 1282, 1300, 1314
BseMII	CTCAG	2 cut(s)	737, 1116
BseNI	ACTGG	3 cut(s)	267, 363, 377
BseRI	GAGGAG	3 cut(s)	269, 600, 707
BseXI	GCAGC	4 cut(s)	309, 455, 1000, 1162
BsgI	GTGCAG	1 cut(s)	1082
BshFI	GGCC	2 cut(s)	514, 807
BsiHKAI	GWGCWC	1 cut(s)	217
BsiHKCI	CYCGRG	1 cut(s)	414
BsiSI	CCGG	1 cut(s)	1061
BslFI	GGGAC	1 cut(s)	791
BslI	CCNNNNNNNGG	6 cut(s)	348, 554, 803, 1282, 1300, 1314
BsmAI	GTCTC	2 cut(s)	385, 834
BsmFI	GGGAC	1 cut(s)	791
BsmI	GAATGC	2 cut(s)	419, 1178
BsnI	GGCC	2 cut(s)	514, 807
BsoBI	CYCGRG	1 cut(s)	414
Bsp1286I	GDGCHC	2 cut(s)	217, 415
Bsp143I	GATC	2 cut(s)	1190, 1324
BspACI	CCGC	4 cut(s)	141, 886, 1251, 1321
BspANI	GGCC	2 cut(s)	514, 807
BspCNI	CTCAG	2 cut(s)	738, 1115
BspLI	GGNNCC	4 cut(s)	508, 779, 780, 1218
BspPI	GGATC	1 cut(s)	1198
BsrI	ACTGG	3 cut(s)	267, 363, 377
BssECI	CCNNGG	1 cut(s)	720
BssMI	GATC	2 cut(s)	1190, 1324
Bst2UI	CCWGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
Bst4CI	ACNGT	3 cut(s)	190, 562, 1198
Bst6I	CTCTTC	1 cut(s)	722
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstC8I	GCNNGC	2 cut(s)	124, 652
BstDEI	CTNAG	4 cut(s)	581, 746, 1102, 1309
BstENI	CCTNNNNNAGG	2 cut(s)	801, 1312
BstF5I	GGATG	3 cut(s)	237, 463, 559
BstHHI	GCGC	1 cut(s)	333
BstKTI	GATC	2 cut(s)	1193, 1327
BstMAI	GTCTC	2 cut(s)	385, 834
BstMBI	GATC	2 cut(s)	1190, 1324
BstMWI	GCNNNNNNNGC	5 cut(s)	191, 328, 1013, 1022, 1105
BstNI	CCWGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
BstNSI	RCATGY	3 cut(s)	224, 795, 860
BstSCI	CCNGG	6 cut(s)	178, 509, 719, 835, 1077, 1212
BstV1I	GCAGC	4 cut(s)	309, 455, 1000, 1162
BstV2I	GAAGAC	1 cut(s)	1201
BstXI	CCANNNNNNTGG	1 cut(s)	870
Bsu36I	CCTNAGG	1 cut(s)	1309
BsuRI	GGCC	2 cut(s)	514, 807
BtgZI	GCGATG	1 cut(s)	833
BtsCI	GGATG	3 cut(s)	237, 463, 559
BtsIMutI	CAGTG	2 cut(s)	260, 370
Cac8I	GCNNGC	2 cut(s)	124, 652
CfoI	GCGC	1 cut(s)	333
Cfr13I	GGNCC	2 cut(s)	778, 1273
CseI	GACGC	1 cut(s)	1159
Csp6I	GTAC	1 cut(s)	558
CviAII	CATG	6 cut(s)	221, 689, 741, 792, 857, 1186
CviQI	GTAC	1 cut(s)	558
DdeI	CTNAG	4 cut(s)	581, 746, 1102, 1309
DpnI	GATC	2 cut(s)	1192, 1326
DpnII	GATC	2 cut(s)	1190, 1324
Eam1104I	CTCTTC	1 cut(s)	722
EarI	CTCTTC	1 cut(s)	722
EciI	GGCGGA	2 cut(s)	156, 875
Eco147I	AGGCCT	2 cut(s)	514, 807
Eco24I	GRGCYC	1 cut(s)	415
Eco47I	GGWCC	2 cut(s)	778, 1273
Eco81I	CCTNAGG	1 cut(s)	1309
Eco88I	CYCGRG	1 cut(s)	414
EcoNI	CCTNNNNNAGG	2 cut(s)	801, 1312
EcoO109I	RGGNCCY	1 cut(s)	778
EcoRII	CCWGG	6 cut(s)	178, 509, 719, 835, 1077, 1212
EcoT38I	GRGCYC	1 cut(s)	415
FaeI	CATG	6 cut(s)	224, 692, 744, 795, 860, 1189
FaqI	GGGAC	1 cut(s)	791
FatI	CATG	6 cut(s)	220, 688, 740, 791, 856, 1185
FauI	CCCGC	1 cut(s)	1314
Fnu4HI	GCNGC	4 cut(s)	323, 444, 1014, 1176
FokI	GGATG	3 cut(s)	244, 470, 566
FriOI	GRGCYC	1 cut(s)	415
Fsp4HI	GCNGC	4 cut(s)	323, 444, 1014, 1176
GlaI	GCGC	1 cut(s)	332
GluI	GCNGC	4 cut(s)	323, 444, 1014, 1176
GsuI	CTGGAG	3 cut(s)	284, 858, 1095
HaeIII	GGCC	2 cut(s)	514, 807
HapII	CCGG	1 cut(s)	1061
HgaI	GACGC	1 cut(s)	1159
HhaI	GCGC	1 cut(s)	333
Hin1II	CATG	6 cut(s)	224, 692, 744, 795, 860, 1189
Hin6I	GCGC	1 cut(s)	331
HinP1I	GCGC	1 cut(s)	331
HinfI	GANTC	4 cut(s)	24, 164, 1247, 1290
HpaII	CCGG	1 cut(s)	1061
HphI	GGTGA	1 cut(s)	173
Hpy166II	GTNNAC	1 cut(s)	704
Hpy188I	TCNGA	5 cut(s)	231, 944, 1071, 1105, 1258
Hpy188III	TCNNGA	4 cut(s)	342, 455, 1112, 1156
Hpy8I	GTNNAC	1 cut(s)	704
Hpy99I	CGWCG	2 cut(s)	78, 231
HpyAV	CCTTC	5 cut(s)	241, 262, 497, 974, 989
HpyCH4III	ACNGT	3 cut(s)	190, 562, 1198
HpyCH4IV	ACGT	3 cut(s)	388, 925, 1279
HpyCH4V	TGCA	7 cut(s)	185, 220, 650, 688, 860, 1099, 1178
HpyF10VI	GCNNNNNNNGC	5 cut(s)	191, 328, 1013, 1022, 1105
HpyF3I	CTNAG	4 cut(s)	581, 746, 1102, 1309
HpySE526I	ACGT	3 cut(s)	388, 925, 1279
Hsp92II	CATG	6 cut(s)	224, 692, 744, 795, 860, 1189
HspAI	GCGC	1 cut(s)	331
KflI	GGGWCCC	1 cut(s)	778
Kzo9I	GATC	2 cut(s)	1190, 1324
LmnI	GCTCC	7 cut(s)	131, 338, 404, 577, 587, 1022, 1222
Lsp1109I	GCAGC	4 cut(s)	309, 455, 1000, 1162
LweI	GCATC	2 cut(s)	68, 1262
MaeII	ACGT	3 cut(s)	388, 925, 1279
MaeIII	GTNAC	1 cut(s)	1092
MalI	GATC	2 cut(s)	1192, 1326
MboI	GATC	2 cut(s)	1190, 1324
MboII	GAAGA	5 cut(s)	449, 653, 739, 1127, 1201
MfeI	CAATTG	1 cut(s)	1041
MhlI	GDGCHC	2 cut(s)	217, 415
MluCI	AATT	5 cut(s)	55, 278, 284, 822, 1041
MlyI	GAGTC	2 cut(s)	33, 1299
MmeI	TCCRAC	3 cut(s)	209, 1000, 1300
MseI	TTAA	2 cut(s)	96, 314
MspA1I	CMGCKG	1 cut(s)	866
MspI	CCGG	1 cut(s)	1061
MspR9I	CCNGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
MunI	CAATTG	1 cut(s)	1041
Mva1269I	GAATGC	2 cut(s)	419, 1178
MvaI	CCWGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
MwoI	GCNNNNNNNGC	5 cut(s)	191, 328, 1013, 1022, 1105
NdeII	GATC	2 cut(s)	1190, 1324
NlaIII	CATG	6 cut(s)	224, 692, 744, 795, 860, 1189
NlaIV	GGNNCC	4 cut(s)	508, 779, 780, 1218
NspI	RCATGY	3 cut(s)	224, 795, 860
PaeR7I	CTCGAG	1 cut(s)	414
PceI	AGGCCT	2 cut(s)	514, 807
PciI	ACATGT	1 cut(s)	791
PctI	GAATGC	2 cut(s)	419, 1178
PfeI	GAWTC	2 cut(s)	164, 1247
PflMI	CCANNNNNTGG	1 cut(s)	348
PkrI	GCNGC	4 cut(s)	324, 445, 1015, 1177
PleI	GAGTC	2 cut(s)	32, 1298
PpsI	GAGTC	2 cut(s)	32, 1298
PpuMI	RGGWCCY	1 cut(s)	778
PscI	ACATGT	1 cut(s)	791
Psp5II	RGGWCCY	1 cut(s)	778
Psp6I	CCWGG	6 cut(s)	178, 509, 719, 835, 1077, 1212
PspGI	CCWGG	6 cut(s)	178, 509, 719, 835, 1077, 1212
PspN4I	GGNNCC	4 cut(s)	508, 779, 780, 1218
PspPI	GGNCC	2 cut(s)	778, 1273
PspPPI	RGGWCCY	1 cut(s)	778
PspXI	VCTCGAGB	1 cut(s)	414
PvuII	CAGCTG	1 cut(s)	866
RsaI	GTAC	1 cut(s)	559
RsaNI	GTAC	1 cut(s)	558
SaqAI	TTAA	2 cut(s)	96, 314
SatI	GCNGC	4 cut(s)	323, 444, 1014, 1176
Sau3AI	GATC	2 cut(s)	1190, 1324
Sau96I	GGNCC	2 cut(s)	778, 1273
SchI	GAGTC	2 cut(s)	33, 1299
ScrFI	CCNGG	6 cut(s)	180, 511, 721, 837, 1079, 1214
SduI	GDGCHC	2 cut(s)	217, 415
SfaNI	GCATC	2 cut(s)	68, 1262
Sfr274I	CTCGAG	1 cut(s)	414
SinI	GGWCC	2 cut(s)	778, 1273
SlaI	CTCGAG	1 cut(s)	414
SmlI	CTYRAG	3 cut(s)	117, 414, 1154
SmoI	CTYRAG	3 cut(s)	117, 414, 1154
Sse9I	AATT	5 cut(s)	55, 278, 284, 822, 1041
SseBI	AGGCCT	2 cut(s)	514, 807
SsiI	CCGC	4 cut(s)	141, 886, 1251, 1321
SspI	AATATT	1 cut(s)	1033
StuI	AGGCCT	2 cut(s)	514, 807
StyD4I	CCNGG	6 cut(s)	178, 509, 719, 835, 1077, 1212
TaaI	ACNGT	3 cut(s)	190, 562, 1198
TaiI	ACGT	3 cut(s)	391, 928, 1282
TaqI	TCGA	1 cut(s)	415
TaqII	GACCGA	1 cut(s)	1261
TasI	AATT	5 cut(s)	55, 278, 284, 822, 1041
TfiI	GAWTC	2 cut(s)	164, 1247
Tru1I	TTAA	2 cut(s)	96, 314
Tru9I	TTAA	2 cut(s)	96, 314
TscAI	CASTG	2 cut(s)	267, 370
TseI	GCWGC	4 cut(s)	322, 443, 1013, 1175
TspDTI	ATGAA	6 cut(s)	17, 78, 474, 744, 936, 1143
TspGWI	ACGGA	4 cut(s)	290, 381, 1135, 1283
TspRI	CASTG	2 cut(s)	267, 370
Van91I	CCANNNNNTGG	1 cut(s)	348
VpaK11BI	GGWCC	2 cut(s)	778, 1273
XagI	CCTNNNNNAGG	2 cut(s)	801, 1312
XapI	RAATTY	2 cut(s)	278, 284
XceI	RCATGY	3 cut(s)	224, 795, 860
XhoI	CTCGAG	1 cut(s)	414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.