AT4G23050

PAS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0008078
Physical Location & Seq
Forward (+)
12079859 .. 12084362
4504 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G23050.1

Sequence Viewer

Length: 2208 bp
ATGGCCGGAAACAACTCGGAATCGAGTCTCTACCAGGTTTTGGTGGAGTGGTGTCAGAGGATGGAGACGAGTCAAGCGAGACTAAGGGAGGATGTTGATGACTTATTGCTTCAGGAGGAGAGTCGAACCGGTAAGGAATCGGCGACGGGATTGGAGACGGACACGGAGAAAGAGGCTGAGGTAGAGGTGGAAGCGGAGGCGGCGGATTCCTGGGATAATCCGACGGCGACTTGGGAGAGAGCTGTTTCAGGATTCTATTTCGCTGATAGTGCGTATCGGACTTTGATGGATTCAATGGGACACGCGATTCATGTAACATCAGCTGCGTCTGGAGAAATTACATTCTGGAGTCGTTCTGCTGAGAATCTGTACCATTGGTATGCTGAGGAAGTTGTTGGCTACAGAACTATTGATGTGCTTGTAACCGAAGAATACCGTAATTCCCTTACTGGTATCAGGAATAGGGTGTGCCGTGGAGAGACTTGGACTGGTCAGTTTCCGTTTCAGAAGAAAACTGGTGAACTATTTATGGCTTTGGTGACTAAAAGCCCTGTGTATGAAAACGGTGAGCTGGTTGGTGTTGTTACTGTCTCGAGCGATGCAACCCTTTTCAATAGGATGCATCCACTAAGTAATGAGCATCAACAACAAGCTCGTAGTAATAATAGACATGAATCAAACTTGAGAAAACATCAGTGGCACCTCCCGAGGCCTCAGATCGCTGCAGCATCACAGGTTCCAGTTGTCCCACAATATTCATCAGCTGTTGCTTCAAACCTGGCGTCGAAGCTTCTACCACAGAGAAATGGAGATGATTCCTTCAATGGAAATCATAATTCGAGGAGCCGAGATGAAAATGTTCCGGTTGTTGCCTCCACAACTTTCGAGAAGTATGGCTCACTGGCGGATAAGTTTTTGGGGAAGCTGCAAAGGAAGATTACTGGCAGCCAAGGAACCGAAGATAATGAGCCTATCTTAAGAAACGGTATCAATAAGTCAGCATGTGGCAGTGGAGGTAGTTCTAAGGCTTCTAATGCAGTTACCTGCACGGCTTTCAGAGACAATGGCAATGGAAAACCAAAAAGGGCTGAAGTTAGAATTTCAGATGTCTATGGAAATGGAGCTGAGGGTTTGATACATAATGGAGATCGCTTTCAGTATATTGGGAACCTGGGACAAAGTAAACCTCCCAGAGGACTAGAGAGTGGTTTGGTGTCTGGCATGCGGGGAACAAAAATGTCGGACCTAAATGGTGAGATAGAAGATGCTTGGAATACTCGTCTTAGTGTTGATCCCTTGCCAATTCTAGGAGTCAACAGCGGTAGGCAACAAAGTCCTGTCAACCAAAGGAATAATAGATTAGTTACTGATTCGTCATGTGAGATACGATGGGAAGATCTACAACTTGGGGAGGAGGTCGGAAGAGGTTCATTTGCTGCGGTTCATCGTGGAGTTTGGAATGGATCGGATGTTGCTATTAAGGTTTACTTCGATGGTGATTACAATGCGATGACTTTGACGGAGTGCAAAAAGGAGATCAACATTATGAAGAAACTGAGACATCCGAATGTGCTACTATTTATGGGAGCAGTATGTACAGAAGAAAAATCTGCCATAATCATGGAATATATGCCAAGAGGGAGTCTCTTCAAAATACTTCATAATACGAATCAGCCATTGGACAAGAAACGCCGTTTAAGAATGGCCCTTGATGTTGCTAGGGGAATGAATTACTTACACCGCAGAAATCCGCCAATTGTACATAGAGACTTGAAATCTTCCAATCTACTCGTGGACAAGAACTGGAATGTCAAGGTTGGAGACTTTGGGTTATCAAAGTGGAAGAACGCAACCTTCTTGAGTACTAAATCCGGGAAAGGAACTCCGCAGTGGATGGCTCCTGAAGTTCTCAGAAGTGAACCTTCGAATGAGAAGTGTGATGTGTTCAGCTTTGGAGTCATCTTATGGGAGCTAATGACTACGTTAGTACCATGGGACCGTTTGAACTCTATTCAGGTTGTTGGAGTTGTTGGTTTCATGGATCGACGATTAGACTTACCTGAAGGATTAAATCCCCGGATCGCATCCATAATACAGGATTGTTGGCAAACTGATCCAGCAAAACGACCGTCGTTCGAGGAATTAATTAGTCAGATGATGAGCCTGTTCCGCAAACCAGGGTCAGGTGCGCAAGAAGAAGACGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

735

Amino Acids

82.15

Weight (kDa)

6.27

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 92 - 196 1e-08 PAS fold
PAS_9 PF13426 105 - 202 3.5e-06 PAS domain
PK_Tyr_Ser-Thr PF07714 467 - 719 3.5e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 469 - 717 3.7e-53 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2190
Acc36I ACCTGC 1 cut(s) 1052
AccB1I GGYRCC 1 cut(s) 699
AccB7I CCANNNNNTGG 1 cut(s) 40
AccII CGCG 1 cut(s) 305
AclWI GGATC 5 cut(s) 1286, 1471, 2049, 2087, 2108
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 1098
AcuI CTGAAG 4 cut(s) 95, 1110, 1923, 2082
AcyI GRCGYC 1 cut(s) 782
AfaI GTAC 5 cut(s) 371, 1597, 1761, 1864, 1989
AfiI CCNNNNNNNGG 4 cut(s) 40, 1193, 1307, 2183
AflII CTTAAG 1 cut(s) 976
AgeI ACCGGT 1 cut(s) 128
AgsI TTSAA 7 cut(s) 294, 613, 774, 823, 1651, 1774, 2005
AjnI CCWGG 5 cut(s) 33, 209, 777, 1170, 2176
AjuI GAANNNNNNNTTGG 2 cut(s) 1661, 1693
AlwI GGATC 5 cut(s) 1286, 1471, 2049, 2087, 2108
Ama87I CYCGRG 2 cut(s) 592, 706
AoxI GGCC 3 cut(s) 3, 710, 1704
ApeKI GCWGC 6 cut(s) 323, 722, 725, 925, 945, 1436
ApoI RAATTY 1 cut(s) 1098
ArsI GACNNNNNNTTYG 4 cut(s) 767, 799, 2114, 2146
AseI ATTAAT 1 cut(s) 2144
AsiGI ACCGGT 1 cut(s) 128
Asp700I GAANNNNTTC 2 cut(s) 858, 1426
AspLEI GCGC 1 cut(s) 2191
AspS9I GGNCC 3 cut(s) 1243, 1705, 1996
AsuC2I CCSGG 2 cut(s) 1873, 2077
AsuHPI GGTGA 5 cut(s) 530, 550, 578, 1265, 1508
AsuII TTCGAA 1 cut(s) 1925
AvaI CYCGRG 2 cut(s) 592, 706
AvaII GGWCC 2 cut(s) 1243, 1996
BaeI ACNNNNGTAYC 2 cut(s) 1971, 2004
BanI GGYRCC 1 cut(s) 699
BauI CACGAG 1 cut(s) 1790
BbvCI CCTCAGC 3 cut(s) 177, 384, 1125
BbvI GCAGC 6 cut(s) 310, 709, 737, 912, 957, 1423
BccI CCATC 5 cut(s) 55, 280, 1383, 1487, 1888
BceAI ACGGC 4 cut(s) 240, 456, 1065, 1677
BciT130I CCWGG 5 cut(s) 35, 211, 779, 1172, 2178
BcnI CCSGG 2 cut(s) 1873, 2077
BfaI CTAG 3 cut(s) 1199, 1307, 1719
BfmI CTRYAG 2 cut(s) 400, 723
BfrI CTTAAG 1 cut(s) 976
BfuAI ACCTGC 1 cut(s) 1052
BglII AGATCT 1 cut(s) 1396
BisI GCNGC 7 cut(s) 201, 324, 723, 726, 926, 946, 1437
BlsI GCNGC 7 cut(s) 202, 325, 724, 727, 927, 947, 1438
BmcAI AGTACT 1 cut(s) 1864
Bme1390I CCNGG 7 cut(s) 35, 211, 779, 1172, 1873, 2077, 2178
Bme18I GGWCC 2 cut(s) 1243, 1996
BmeT110I CYCGRG 2 cut(s) 592, 706
BmgT120I GGNCC 3 cut(s) 1243, 1705, 1996
BmiI GGNNCC 7 cut(s) 701, 738, 845, 955, 1169, 1899, 1997
BmrFI CCNGG 7 cut(s) 35, 211, 779, 1172, 1873, 2077, 2178
BmsI GCATC 7 cut(s) 589, 609, 631, 649, 737, 1255, 2093
BplI GAGNNNNNCTC 2 cut(s) 1629, 1661
BpmI CTGGAG 2 cut(s) 351, 367
Bpu10I CCTNAGC 3 cut(s) 177, 384, 1125
Bpu14I TTCGAA 1 cut(s) 1925
BpuEI CTTGAG 2 cut(s) 703, 1879
BpuMI CCSGG 2 cut(s) 1873, 2077
BsaHI GRCGYC 1 cut(s) 782
BsaJI CCNNGG 8 cut(s) 210, 472, 707, 949, 1171, 1991, 2075, 2177
BsaWI WCCGGW 2 cut(s) 128, 862
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 1193, 1307, 2183
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 7 cut(s) 454, 493, 520, 740, 906, 946, 1808
Bse3DI GCAATG 1 cut(s) 1075
BseBI CCWGG 5 cut(s) 35, 211, 779, 1172, 2178
BseDI CCNNGG 8 cut(s) 210, 472, 707, 949, 1171, 1991, 2075, 2177
BseGI GGATG 8 cut(s) 66, 97, 622, 624, 1474, 1561, 1899, 2084
BseLI CCNNNNNNNGG 4 cut(s) 40, 1193, 1307, 2183
BseMI GCAATG 1 cut(s) 1075
BseMII CTCAG 7 cut(s) 168, 351, 375, 728, 1116, 1547, 1924
BseNI ACTGG 7 cut(s) 454, 493, 520, 740, 906, 946, 1808
BseRI GAGGAG 3 cut(s) 131, 856, 1427
BseXI GCAGC 6 cut(s) 310, 709, 737, 912, 957, 1423
BsgI GTGCAG 1 cut(s) 1030
Bsh1236I CGCG 1 cut(s) 305
Bsh1285I CGRYCG 1 cut(s) 2129
BshFI GGCC 3 cut(s) 5, 712, 1706
BshNI GGYRCC 1 cut(s) 699
BshTI ACCGGT 1 cut(s) 128
BsiEI CGRYCG 1 cut(s) 2129
BsiHKCI CYCGRG 2 cut(s) 592, 706
BsiSI CCGG 5 cut(s) 6, 129, 863, 1872, 2077
BslFI GGGAC 4 cut(s) 312, 731, 1188, 2009
BslI CCNNNNNNNGG 4 cut(s) 40, 1193, 1307, 2183
BsmBI CGTCTC 2 cut(s) 59, 149
BsmFI GGGAC 4 cut(s) 312, 731, 1188, 2009
BsnI GGCC 3 cut(s) 5, 712, 1706
BsoBI CYCGRG 2 cut(s) 592, 706
Bsp119I TTCGAA 1 cut(s) 1925
Bsp1407I TGTACA 2 cut(s) 1595, 1759
Bsp143I GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
Bsp19I CCATGG 1 cut(s) 1991
BspANI GGCC 3 cut(s) 5, 712, 1706
BspCNI CTCAG 7 cut(s) 169, 352, 376, 727, 1117, 1548, 1923
BspFNI CGCG 1 cut(s) 305
BspLI GGNNCC 7 cut(s) 701, 738, 845, 955, 1169, 1899, 1997
BspMAI CTGCAG 1 cut(s) 727
BspMI ACCTGC 1 cut(s) 1052
BspPI GGATC 5 cut(s) 1286, 1471, 2049, 2087, 2108
BspT104I TTCGAA 1 cut(s) 1925
BspT107I GGYRCC 1 cut(s) 699
BspTI CTTAAG 1 cut(s) 976
BsrDI GCAATG 1 cut(s) 1075
BsrFI RCCGGY 1 cut(s) 128
BsrGI TGTACA 2 cut(s) 1595, 1759
BsrI ACTGG 7 cut(s) 454, 493, 520, 740, 906, 946, 1808
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 8 cut(s) 210, 472, 707, 949, 1171, 1991, 2075, 2177
BssMI GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
BssNI GRCGYC 1 cut(s) 782
BssSI CACGAG 1 cut(s) 1790
BssT1I CCWWGG 2 cut(s) 949, 1991
Bst2BI CACGAG 1 cut(s) 1790
Bst2UI CCWGG 5 cut(s) 35, 211, 779, 1172, 2178
Bst4CI ACNGT 6 cut(s) 437, 566, 589, 986, 2000, 2130
Bst6I CTCTTC 2 cut(s) 1417, 1652
BstACI GRCGYC 1 cut(s) 782
BstAFI CTTAAG 1 cut(s) 976
BstAUI TGTACA 2 cut(s) 1595, 1759
BstBI TTCGAA 1 cut(s) 1925
BstC8I GCNNGC 1 cut(s) 1223
BstDSI CCRYGG 2 cut(s) 472, 1991
BstENI CCTNNNNNAGG 1 cut(s) 1191
BstF5I GGATG 8 cut(s) 66, 97, 622, 624, 1474, 1561, 1899, 2084
BstFNI CGCG 1 cut(s) 305
BstHHI GCGC 1 cut(s) 2191
BstKTI GATC 9 cut(s) 720, 1150, 1294, 1399, 1466, 1539, 2044, 2082, 2116
BstMBI GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
BstMCI CGRYCG 1 cut(s) 2129
BstMWI GCNNNNNNNGC 4 cut(s) 200, 269, 1034, 2169
BstNI CCWGG 5 cut(s) 35, 211, 779, 1172, 2178
BstNSI RCATGY 2 cut(s) 1005, 1225
BstSCI CCNGG 7 cut(s) 33, 209, 777, 1170, 1871, 2075, 2176
BstSFI CTRYAG 2 cut(s) 400, 723
BstUI CGCG 1 cut(s) 305
BstV1I GCAGC 6 cut(s) 310, 709, 737, 912, 957, 1423
BstX2I RGATCY 1 cut(s) 1396
BstXI CCANNNNNNTGG 1 cut(s) 1621
BstYI RGATCY 1 cut(s) 1396
BsuRI GGCC 3 cut(s) 5, 712, 1706
BtgI CCRYGG 2 cut(s) 472, 1991
BtgZI GCGATG 2 cut(s) 612, 1523
BtsCI GGATG 8 cut(s) 66, 97, 622, 624, 1474, 1561, 1899, 2084
BtsI GCAGTG 2 cut(s) 1015, 1895
BtsIMutI CAGTG 4 cut(s) 701, 899, 1015, 1895
BveI ACCTGC 1 cut(s) 1052
Cac8I GCNNGC 1 cut(s) 1223
CfoI GCGC 1 cut(s) 2191
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 3 cut(s) 1243, 1705, 1996
CseI GACGC 2 cut(s) 315, 771
CsiI ACCWGGT 1 cut(s) 33
Csp6I GTAC 5 cut(s) 370, 1596, 1760, 1863, 1988
CspAI ACCGGT 1 cut(s) 128
CviAII CATG 8 cut(s) 311, 671, 1002, 1222, 1377, 1621, 1992, 2038
CviQI GTAC 5 cut(s) 370, 1596, 1760, 1863, 1988
DpnI GATC 9 cut(s) 719, 1149, 1293, 1398, 1465, 1538, 2043, 2081, 2115
DpnII GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 1417, 1652
EarI CTCTTC 2 cut(s) 1417, 1652
EciI GGCGGA 3 cut(s) 218, 920, 1740
Eco130I CCWWGG 2 cut(s) 949, 1991
Eco147I AGGCCT 1 cut(s) 712
Eco47I GGWCC 2 cut(s) 1243, 1996
Eco57I CTGAAG 4 cut(s) 95, 1110, 1923, 2082
Eco88I CYCGRG 2 cut(s) 592, 706
EcoNI CCTNNNNNAGG 1 cut(s) 1191
EcoRII CCWGG 5 cut(s) 33, 209, 777, 1170, 2176
EcoT14I CCWWGG 2 cut(s) 949, 1991
EcoT22I ATGCAT 1 cut(s) 624
ErhI CCWWGG 2 cut(s) 949, 1991
Esp3I CGTCTC 2 cut(s) 59, 149
FaeI CATG 8 cut(s) 314, 674, 1005, 1225, 1380, 1624, 1995, 2041
FalI AAGNNNNNCTT 4 cut(s) 1472, 1504, 1906, 1938
FaqI GGGAC 4 cut(s) 312, 731, 1188, 2009
FatI CATG 8 cut(s) 310, 670, 1001, 1221, 1376, 1620, 1991, 2037
FauI CCCGC 1 cut(s) 1218
Fnu4HI GCNGC 7 cut(s) 201, 324, 723, 726, 926, 946, 1437
FokI GGATG 8 cut(s) 73, 104, 609, 631, 1481, 1548, 1906, 2071
Fsp4HI GCNGC 7 cut(s) 201, 324, 723, 726, 926, 946, 1437
FspBI CTAG 3 cut(s) 1199, 1307, 1719
FspI TGCGCA 1 cut(s) 2190
GlaI GCGC 1 cut(s) 2190
GluI GCNGC 7 cut(s) 201, 324, 723, 726, 926, 946, 1437
GsuI CTGGAG 2 cut(s) 351, 367
HaeIII GGCC 3 cut(s) 5, 712, 1706
HapII CCGG 5 cut(s) 6, 129, 863, 1872, 2077
HgaI GACGC 2 cut(s) 315, 771
HhaI GCGC 1 cut(s) 2191
Hin1I GRCGYC 1 cut(s) 782
Hin1II CATG 8 cut(s) 314, 674, 1005, 1225, 1380, 1624, 1995, 2041
Hin6I GCGC 1 cut(s) 2189
HinP1I GCGC 1 cut(s) 2189
HincII GTYRAC 2 cut(s) 1315, 1342
HindII GTYRAC 2 cut(s) 1315, 1342
HindIII AAGCTT 1 cut(s) 788
HpaII CCGG 5 cut(s) 6, 129, 863, 1872, 2077
HphI GGTGA 5 cut(s) 530, 550, 578, 1265, 1508
Hpy166II GTNNAC 7 cut(s) 521, 1184, 1315, 1342, 1486, 1795, 1919
Hpy8I GTNNAC 7 cut(s) 521, 1184, 1315, 1342, 1486, 1795, 1919
Hpy99I CGWCG 5 cut(s) 148, 226, 787, 2049, 2134
HpyAV CCTTC 4 cut(s) 829, 1864, 1932, 2057
HpyCH4III ACNGT 6 cut(s) 437, 566, 589, 986, 2000, 2130
HpyCH4IV ACGT 1 cut(s) 1982
HpyCH4V TGCA 7 cut(s) 602, 622, 725, 928, 1037, 1047, 1527
HpyF10VI GCNNNNNNNGC 4 cut(s) 200, 269, 1034, 2169
HpySE526I ACGT 1 cut(s) 1982
Hsp92I GRCGYC 1 cut(s) 782
Hsp92II CATG 8 cut(s) 314, 674, 1005, 1225, 1380, 1624, 1995, 2041
HspAI GCGC 1 cut(s) 2189
Kzo9I GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
LmnI GCTCC 5 cut(s) 843, 1121, 1586, 1903, 1969
Lsp1109I GCAGC 6 cut(s) 310, 709, 737, 912, 957, 1423
LweI GCATC 7 cut(s) 589, 609, 631, 649, 737, 1255, 2093
MabI ACCWGGT 1 cut(s) 33
MaeI CTAG 3 cut(s) 1199, 1307, 1719
MaeII ACGT 1 cut(s) 1982
MaeIII GTNAC 6 cut(s) 313, 421, 538, 583, 1039, 1363
MalI GATC 9 cut(s) 719, 1149, 1293, 1398, 1465, 1538, 2043, 2081, 2115
MboI GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
MfeI CAATTG 1 cut(s) 1755
MflI RGATCY 1 cut(s) 1396
MluCI AATT 9 cut(s) 336, 439, 835, 1098, 1302, 1729, 1755, 2141, 2145
MlyI GAGTC 7 cut(s) 34, 79, 130, 358, 1320, 1651, 1965
MmeI TCCRAC 5 cut(s) 245, 1221, 1399, 1798, 2002
Mph1103I ATGCAT 1 cut(s) 624
MroXI GAANNNNTTC 2 cut(s) 858, 1426
MseI TTAA 5 cut(s) 977, 1479, 1697, 2069, 2144
MslI CAYNNNNRTG 3 cut(s) 378, 1566, 1619
MspA1I CMGCKG 3 cut(s) 323, 764, 1320
MspCI CTTAAG 1 cut(s) 976
MspI CCGG 5 cut(s) 6, 129, 863, 1872, 2077
MspR9I CCNGG 7 cut(s) 35, 211, 779, 1172, 1873, 2077, 2178
MunI CAATTG 1 cut(s) 1755
MvaI CCWGG 5 cut(s) 35, 211, 779, 1172, 2178
MvnI CGCG 1 cut(s) 305
MwoI GCNNNNNNNGC 4 cut(s) 200, 269, 1034, 2169
NciI CCSGG 2 cut(s) 1873, 2077
NcoI CCATGG 1 cut(s) 1991
NdeII GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
NlaIII CATG 8 cut(s) 314, 674, 1005, 1225, 1380, 1624, 1995, 2041
NlaIV GGNNCC 7 cut(s) 701, 738, 845, 955, 1169, 1899, 1997
NmeAIII GCCGAG 1 cut(s) 872
NmuCI GTSAC 1 cut(s) 538
NsbI TGCGCA 1 cut(s) 2190
NsiI ATGCAT 1 cut(s) 624
NspI RCATGY 2 cut(s) 1005, 1225
NspV TTCGAA 1 cut(s) 1925
PaeI GCATGC 1 cut(s) 1225
PaeR7I CTCGAG 1 cut(s) 592
PceI AGGCCT 1 cut(s) 712
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PdmI GAANNNNTTC 2 cut(s) 858, 1426
PflMI CCANNNNNTGG 1 cut(s) 40
PfoI TCCNGGA 1 cut(s) 1871
PinAI ACCGGT 1 cut(s) 128
PkrI GCNGC 7 cut(s) 202, 325, 724, 727, 927, 947, 1438
PleI GAGTC 7 cut(s) 33, 78, 129, 357, 1319, 1650, 1964
PpsI GAGTC 7 cut(s) 33, 78, 129, 357, 1319, 1650, 1964
PshBI ATTAAT 1 cut(s) 2144
Psp6I CCWGG 5 cut(s) 33, 209, 777, 1170, 2176
PspGI CCWGG 5 cut(s) 33, 209, 777, 1170, 2176
PspN4I GGNNCC 7 cut(s) 701, 738, 845, 955, 1169, 1899, 1997
PspPI GGNCC 3 cut(s) 1243, 1705, 1996
PstI CTGCAG 1 cut(s) 727
PsuI RGATCY 1 cut(s) 1396
PvuII CAGCTG 2 cut(s) 323, 764
RsaI GTAC 5 cut(s) 371, 1597, 1761, 1864, 1989
RsaNI GTAC 5 cut(s) 370, 1596, 1760, 1863, 1988
RseI CAYNNNNRTG 3 cut(s) 378, 1566, 1619
SaqAI TTAA 5 cut(s) 977, 1479, 1697, 2069, 2144
SatI GCNGC 7 cut(s) 201, 324, 723, 726, 926, 946, 1437
Sau3AI GATC 9 cut(s) 717, 1147, 1291, 1396, 1463, 1536, 2041, 2079, 2113
Sau96I GGNCC 3 cut(s) 1243, 1705, 1996
ScaI AGTACT 1 cut(s) 1864
SchI GAGTC 7 cut(s) 34, 79, 130, 358, 1320, 1651, 1965
ScrFI CCNGG 7 cut(s) 35, 211, 779, 1172, 1873, 2077, 2178
SexAI ACCWGGT 1 cut(s) 33
SfaNI GCATC 7 cut(s) 589, 609, 631, 649, 737, 1255, 2093
SfcI CTRYAG 2 cut(s) 400, 723
Sfr274I CTCGAG 1 cut(s) 592
SfuI TTCGAA 1 cut(s) 1925
SinI GGWCC 2 cut(s) 1243, 1996
SlaI CTCGAG 1 cut(s) 592
SmiMI CAYNNNNRTG 3 cut(s) 378, 1566, 1619
SmlI CTYRAG 4 cut(s) 592, 682, 976, 1858
SmoI CTYRAG 4 cut(s) 592, 682, 976, 1858
SphI GCATGC 1 cut(s) 1225
Sse9I AATT 9 cut(s) 336, 439, 835, 1098, 1302, 1729, 1755, 2141, 2145
SseBI AGGCCT 1 cut(s) 712
SspI AATATT 1 cut(s) 755
SspMI CTAG 3 cut(s) 1199, 1307, 1719
StuI AGGCCT 1 cut(s) 712
StyD4I CCNGG 7 cut(s) 33, 209, 777, 1170, 1871, 2075, 2176
StyI CCWWGG 2 cut(s) 949, 1991
TaaI ACNGT 6 cut(s) 437, 566, 589, 986, 2000, 2130
TaiI ACGT 1 cut(s) 1985
TasI AATT 9 cut(s) 336, 439, 835, 1098, 1302, 1729, 1755, 2141, 2145
TatI WGTACW 3 cut(s) 1595, 1759, 1862
TauI GCSGC 1 cut(s) 203
Tru1I TTAA 5 cut(s) 977, 1479, 1697, 2069, 2144
Tru9I TTAA 5 cut(s) 977, 1479, 1697, 2069, 2144
TscAI CASTG 4 cut(s) 701, 906, 1015, 1895
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 6 cut(s) 323, 722, 725, 925, 945, 1436
Tsp45I GTSAC 1 cut(s) 538
TspGWI ACGGA 4 cut(s) 173, 179, 489, 1535
TspRI CASTG 4 cut(s) 701, 906, 1015, 1895
Van91I CCANNNNNTGG 1 cut(s) 40
Vha464I CTTAAG 1 cut(s) 976
VpaK11BI GGWCC 2 cut(s) 1243, 1996
VspI ATTAAT 1 cut(s) 2144
XagI CCTNNNNNAGG 1 cut(s) 1191
XapI RAATTY 1 cut(s) 1098
XceI RCATGY 2 cut(s) 1005, 1225
XcmI CCANNNNNNNNNTGG 1 cut(s) 1789
XhoI CTCGAG 1 cut(s) 592
XmnI GAANNNNTTC 2 cut(s) 858, 1426
XspI CTAG 3 cut(s) 1199, 1307, 1719
ZrmI AGTACT 1 cut(s) 1864
Zsp2I ATGCAT 1 cut(s) 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.