RchiOBHm_Chr7g0199051

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0008078
Physical Location & Seq
Reverse (-)
17076473 .. 17080812
4340 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17812

Sequence Viewer

Length: 2076 bp
ATGTACCGACTGCTGCTGGACCGGTGCCGGAGCTTGGAGGCCAGCCACGTCAGACTCAGAGCCGAGTTCCGTGAGCTGCAGCACCACAACGGGAAGACCGAGGAGGAGGAGGAGGATGAGGTGCTGACGTCAGAGTTCTCGGTTCCGCACCTTGTCCGGGGGTTCTTCCTGTCCGGGAGTCCGTACCGGAGCATACTGGACAACATGGGCCAGGCCGTCCACGTCTGCACGGCCTCCGCCGGAGAGATCCAGTACTGGAATCGTGCGGCTGAGAATCTCTATGGATGGAAGGACTATGAAGCCCTTGGACAAAGGGTTGCTGAGCTCCTCATTGCTGAAGAGTACTATGCACCTTTAAAGAGAATCATGGAAAGATTGAATATTGGCTTATCATGGTCTGGTCAGTTTCCTTTCAAAAAGAGGTCGGGAGAGATATTTATGGCAATGGTGACAAAAAGCCCATTGTATGAGGATGGTGAGCTTGTTGGTATCATCACTGTTTCAAGTGATGCGGCATTGTTTAATAGAATTGAAGCAGAAAATCTGGGAACATCCAAGGATCATGCCAAGGGCCAACATAAGGGATGGCAGTTGAACTGGAACAAGAGCCAATTACACCCTGGCCGGCCACCGGTCGCACCAGTGCCACAGATTGCATCATCTGTTTCCAATCTGGCCTCCAAACTGCTATCACGAAATGATGACAATGGATGCAATCCAAGTGAGGTTAACAAGGCAAGGGAGAACTCTACAGCAGACACTGGAAATGCTAACTTAGAGAAAGCTGGTACACTAGCGTCTAAGTTCTTGGCAAAGTTGAACATTAAAGGAGCCAACAAAGGCGGGAAAGAAGATTATGAAACATCTCAAAAAATTGGCAGAAATGATGCTAATCTATTTAGCAATGAAGTGACAAAGCAGCCTAATTCCCCTAGAAATTCAAACGCATCAAGTGTATATGGGCATAAGAATCCGATTGATTTAGATCAGAGTTCTGTCTTAGCCTCTTCAAGGGAGTGCAATGAGTATATTGGGTTGCATAGACCAAATCATCTATTGCCAAAATTACACTATGCAAATGATCCGGGGCCTGAAGAATGCAACTTGAATGCTTCAGAGGTAGAAGATGCAATGCAAAAACAACCAGATGGTCAACCATTACCTAGTTCAGCAGAGAGCACTCGCAGCCCCAATAGTTCATCAAGCAAAGGGGTTAATAATTCTACTTCCATAGGAGGTTGTGAGATTCGTTGGGAGGACTTACATTTGGGAGAGGAAATTGGACAAGGTTCCTGTGCTATTGTATATCGTGGAAACTGGAATGCATCGGATGTTGCCATTAAGGTTTACTTTAAAAATGAATACAGTGAGGGGGTTTTGCATGACTACAGAAAGGAGATTGATATAATGAAAAGATTGCGGCATCCTAATGTGCTGCTATTTATGGGAGCAGTATATTCACAAGAACGTCTAGCTATTGTCACAGAGTACCTACCTAGGGGAAGTCTTTTCAGACAACTTCACAAAAACAATCAAGCATTGGATATTAAACGACGTATGAGGATGGCCCTTGATGTTGCGAGAGGTATGAATTACTTGCATCGTAGAAATCCACCTATAGTTCACAGAGACTTAAAATCGTCTAACTTGCTGGTTGATAAGAACTGGACTGTCAAGGTTGGAGACTTTGGTCTGTCGAAGTTAAAGAACGCAACCTTCTTGACTGCAAAATCTGGGAGAGGAACACCTCAGTGGATGGCACCTGAAGTCCTCCGGAATGAACCTTCAAATGAGAAGTCTGATGTATTTAGCTTTGGTGTCATCCTTTGGGAACTAATGACTGTATCGGTCCCATGGAATAACCTCAATCCCTTGCAGGTTGTTGGAGTTGTAGGCTTCATGGATAGAAGATTAGACATACCAGAAGGCCTCAATCCCGAAATAGTATCCATTATTGAAGACTGTTGGCGTAGTGACCCAGGACAGCGTCCATTGTTTGAAGATGTGATTCAGAGAATGAAGGACTTAGTTATCAAAGTTGAAGCAGCTTCAGTAAGAAGAAGTTCAAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

691

Amino Acids

77.52

Weight (kDa)

7.03

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 62 - 167 3.9e-10 PAS fold
PAS_4 PF08448 66 - 170 5.7e-07 PAS fold
PAS_9 PF13426 75 - 170 1.4e-08 PAS domain
PK_Tyr_Ser-Thr PF07714 421 - 672 9.8e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 422 - 671 5.4e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 131
Acc36I ACCTGC 1 cut(s) 1867
AccB1I GGYRCC 2 cut(s) 24, 1759
AccIII TCCGGA 1 cut(s) 1773
AciI CCGC 6 cut(s) 146, 237, 266, 512, 843, 1420
AclWI GGATC 3 cut(s) 241, 567, 1076
AcoI YGGCCR 2 cut(s) 622, 626
AcsI RAATTY 1 cut(s) 937
AcuI CTGAAG 5 cut(s) 357, 1098, 1113, 1785, 2034
AcyI GRCGYC 1 cut(s) 128
AfaI GTAC 6 cut(s) 5, 185, 254, 344, 790, 1490
AfiI CCNNNNNNNGG 6 cut(s) 34, 157, 580, 631, 1011, 1498
AgeI ACCGGT 2 cut(s) 21, 631
AjiI CACGTC 2 cut(s) 49, 223
AjnI CCWGG 3 cut(s) 210, 619, 1978
AleI CACNNNNGTG 1 cut(s) 1750
AluBI AGCT 8 cut(s) 33, 76, 325, 481, 785, 1475, 1812, 2048
AluI AGCT 8 cut(s) 33, 76, 325, 481, 785, 1475, 1812, 2048
Alw21I GWGCWC 2 cut(s) 327, 1181
Alw26I GTCTC 2 cut(s) 1623, 1677
AlwI GGATC 3 cut(s) 241, 567, 1076
AlwNI CAGNNNCTG 1 cut(s) 761
Aor13HI TCCGGA 1 cut(s) 1773
ApeKI GCWGC 7 cut(s) 13, 76, 79, 919, 1185, 1435, 2045
ApoI RAATTY 1 cut(s) 937
ArsI GACNNNNNNTTYG 2 cut(s) 1781, 1813
AsiGI ACCGGT 2 cut(s) 21, 631
Asp700I GAANNNNTTC 1 cut(s) 2062
AspA2I CCTAGG 1 cut(s) 1496
AspS9I GGNCC 6 cut(s) 19, 208, 571, 1088, 1567, 1849
AsuC2I CCSGG 3 cut(s) 158, 175, 1086
AsuHPI GGTGA 2 cut(s) 460, 488
AvaII GGWCC 2 cut(s) 19, 1849
AvrII CCTAGG 1 cut(s) 1496
BanI GGYRCC 2 cut(s) 24, 1759
BanII GRGCYC 1 cut(s) 327
BbsI GAAGAC 2 cut(s) 101, 1965
Bbv12I GWGCWC 2 cut(s) 327, 1181
BbvI GCAGC 6 cut(s) 63, 91, 931, 1197, 1422, 2057
BccI CCATC 6 cut(s) 279, 467, 579, 1142, 1558, 1750
BceAI ACGGC 2 cut(s) 200, 246
BciT130I CCWGG 3 cut(s) 212, 621, 1980
BciVI GTATCC 1 cut(s) 1957
BcnI CCSGG 3 cut(s) 158, 175, 1086
BcoDI GTCTC 2 cut(s) 1623, 1677
BfaI CTAG 5 cut(s) 794, 933, 1164, 1472, 1497
BfmI CTRYAG 4 cut(s) 77, 750, 1387, 1617
BfuAI ACCTGC 1 cut(s) 1867
BfuI GTATCC 1 cut(s) 1957
BlnI CCTAGG 1 cut(s) 1496
BlpI GCTNAGC 1 cut(s) 321
BmcAI AGTACT 2 cut(s) 254, 344
Bme1390I CCNGG 6 cut(s) 158, 175, 212, 621, 1086, 1980
Bme18I GGWCC 2 cut(s) 19, 1849
BmgBI CACGTC 2 cut(s) 49, 223
BmgT120I GGNCC 6 cut(s) 19, 208, 571, 1088, 1567, 1849
BmiI GGNNCC 7 cut(s) 26, 144, 832, 1089, 1291, 1761, 1851
BmrFI CCNGG 6 cut(s) 158, 175, 212, 621, 1086, 1980
BmsI GCATC 9 cut(s) 499, 665, 701, 877, 956, 1117, 1334, 1432, 1609
BoxI GACNNNNGTC 1 cut(s) 1689
BpiI GAAGAC 2 cut(s) 101, 1965
Bpu1102I GCTNAGC 1 cut(s) 321
BpuMI CCSGG 3 cut(s) 158, 175, 1086
BsaBI GATNNNNATC 2 cut(s) 891, 984
BsaHI GRCGYC 1 cut(s) 128
BsaWI WCCGGW 4 cut(s) 21, 186, 631, 1773
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 157, 580, 631, 1011, 1498
Bse118I RCCGGY 3 cut(s) 21, 624, 631
Bse1I ACTGG 8 cut(s) 201, 250, 260, 602, 641, 766, 1322, 1670
Bse3DI GCAATG 5 cut(s) 330, 450, 910, 1027, 1137
Bse8I GATNNNNATC 2 cut(s) 891, 984
BseAI TCCGGA 1 cut(s) 1773
BseBI CCWGG 3 cut(s) 212, 621, 1980
BseJI GATNNNNATC 2 cut(s) 891, 984
BseLI CCNNNNNNNGG 6 cut(s) 34, 157, 580, 631, 1011, 1498
BseMI GCAATG 5 cut(s) 330, 450, 910, 1027, 1137
BseMII CTCAG 4 cut(s) 70, 261, 312, 1763
BseNI ACTGG 8 cut(s) 201, 250, 260, 602, 641, 766, 1322, 1670
BseRI GAGGAG 5 cut(s) 116, 119, 122, 125, 317
BseXI GCAGC 6 cut(s) 63, 91, 931, 1197, 1422, 2057
BsgI GTGCAG 1 cut(s) 211
Bsh1285I CGRYCG 1 cut(s) 636
BshNI GGYRCC 2 cut(s) 24, 1759
BshTI ACCGGT 2 cut(s) 21, 631
BsiEI CGRYCG 1 cut(s) 636
BsiHKAI GWGCWC 2 cut(s) 327, 1181
BslFI GGGAC 1 cut(s) 1835
BslI CCNNNNNNNGG 6 cut(s) 34, 157, 580, 631, 1011, 1498
BsmAI GTCTC 2 cut(s) 1623, 1677
BsmFI GGGAC 1 cut(s) 1835
BsmI GAATGC 3 cut(s) 1103, 1114, 1327
Bsp1286I GDGCHC 2 cut(s) 327, 1181
Bsp13I TCCGGA 1 cut(s) 1773
Bsp143I GATC 4 cut(s) 246, 559, 985, 1081
Bsp1720I GCTNAGC 1 cut(s) 321
Bsp19I CCATGG 1 cut(s) 1853
BspACI CCGC 6 cut(s) 146, 237, 266, 512, 843, 1420
BspCNI CTCAG 4 cut(s) 69, 262, 313, 1762
BspEI TCCGGA 1 cut(s) 1773
BspLI GGNNCC 7 cut(s) 26, 144, 832, 1089, 1291, 1761, 1851
BspMAI CTGCAG 1 cut(s) 81
BspMI ACCTGC 1 cut(s) 1867
BspPI GGATC 3 cut(s) 241, 567, 1076
BspT107I GGYRCC 2 cut(s) 24, 1759
BsrDI GCAATG 5 cut(s) 330, 450, 910, 1027, 1137
BsrFI RCCGGY 3 cut(s) 21, 624, 631
BsrI ACTGG 8 cut(s) 201, 250, 260, 602, 641, 766, 1322, 1670
BssAI RCCGGY 3 cut(s) 21, 624, 631
BssMI GATC 4 cut(s) 246, 559, 985, 1081
BssNI GRCGYC 1 cut(s) 128
BssT1I CCWWGG 5 cut(s) 304, 555, 567, 1496, 1853
Bst2UI CCWGG 3 cut(s) 212, 621, 1980
Bst4CI ACNGT 5 cut(s) 499, 1367, 1672, 1843, 1964
Bst6I CTCTTC 2 cut(s) 333, 1012
BstACI GRCGYC 1 cut(s) 128
BstC8I GCNNGC 2 cut(s) 43, 626
BstDEI CTNAG 8 cut(s) 56, 270, 321, 775, 801, 1000, 1749, 2026
BstDSI CCRYGG 1 cut(s) 1853
BstENI CCTNNNNNAGG 1 cut(s) 1009
BstKTI GATC 4 cut(s) 249, 562, 988, 1084
BstMAI GTCTC 2 cut(s) 1623, 1677
BstMBI GATC 4 cut(s) 246, 559, 985, 1081
BstMCI CGRYCG 1 cut(s) 636
BstMWI GCNNNNNNNGC 1 cut(s) 1185
BstNI CCWGG 3 cut(s) 212, 621, 1980
BstPAI GACNNNNGTC 1 cut(s) 1689
BstSCI CCNGG 6 cut(s) 156, 173, 210, 619, 1084, 1978
BstSFI CTRYAG 4 cut(s) 77, 750, 1387, 1617
BstV1I GCAGC 6 cut(s) 63, 91, 931, 1197, 1422, 2057
BstV2I GAAGAC 2 cut(s) 101, 1965
BstX2I RGATCY 1 cut(s) 246
BstYI RGATCY 1 cut(s) 246
BsuI GTATCC 1 cut(s) 1957
BtgI CCRYGG 1 cut(s) 1853
BtrI CACGTC 2 cut(s) 49, 223
BtsIMutI CAGTG 5 cut(s) 495, 648, 759, 1372, 1757
BveI ACCTGC 1 cut(s) 1867
Cac8I GCNNGC 2 cut(s) 43, 626
CaiI CAGNNNCTG 1 cut(s) 761
Cfr10I RCCGGY 3 cut(s) 21, 624, 631
Cfr13I GGNCC 6 cut(s) 19, 208, 571, 1088, 1567, 1849
CseI GACGC 2 cut(s) 786, 1976
Csp6I GTAC 6 cut(s) 4, 184, 253, 343, 789, 1489
CspAI ACCGGT 2 cut(s) 21, 631
CviAII CATG 7 cut(s) 205, 367, 393, 563, 1382, 1854, 1900
CviQI GTAC 6 cut(s) 4, 184, 253, 343, 789, 1489
DdeI CTNAG 8 cut(s) 56, 270, 321, 775, 801, 1000, 1749, 2026
DpnI GATC 4 cut(s) 248, 561, 987, 1083
DpnII GATC 4 cut(s) 246, 559, 985, 1081
DraI TTTAAA 2 cut(s) 357, 1354
EaeI YGGCCR 2 cut(s) 622, 626
Eam1104I CTCTTC 2 cut(s) 333, 1012
EarI CTCTTC 2 cut(s) 333, 1012
EciI GGCGGA 1 cut(s) 226
Ecl136II GAGCTC 1 cut(s) 325
Eco130I CCWWGG 5 cut(s) 304, 555, 567, 1496, 1853
Eco147I AGGCCT 1 cut(s) 1929
Eco24I GRGCYC 1 cut(s) 327
Eco47I GGWCC 2 cut(s) 19, 1849
Eco53kI GAGCTC 1 cut(s) 325
Eco57I CTGAAG 5 cut(s) 357, 1098, 1113, 1785, 2034
EcoICRI GAGCTC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 1009
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRII CCWGG 3 cut(s) 210, 619, 1978
EcoT14I CCWWGG 5 cut(s) 304, 555, 567, 1496, 1853
EcoT22I ATGCAT 1 cut(s) 1327
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 5 cut(s) 304, 555, 567, 1496, 1853
FaeI CATG 7 cut(s) 208, 370, 396, 566, 1385, 1857, 1903
FalI AAGNNNNNCTT 2 cut(s) 1334, 1366
FaqI GGGAC 1 cut(s) 1835
FatI CATG 7 cut(s) 204, 366, 392, 562, 1381, 1853, 1899
FauI CCCGC 1 cut(s) 836
FriOI GRGCYC 1 cut(s) 327
FseI GGCCGGCC 1 cut(s) 628
FspBI CTAG 5 cut(s) 794, 933, 1164, 1472, 1497
HgaI GACGC 2 cut(s) 786, 1976
Hin1I GRCGYC 1 cut(s) 128
Hin1II CATG 7 cut(s) 208, 370, 396, 566, 1385, 1857, 1903
HincII GTYRAC 2 cut(s) 730, 1154
HindII GTYRAC 2 cut(s) 730, 1154
HinfI GANTC 8 cut(s) 54, 178, 259, 274, 363, 970, 1246, 2008
HpaI GTTAAC 1 cut(s) 730
HphI GGTGA 2 cut(s) 460, 488
Hpy166II GTNNAC 6 cut(s) 220, 730, 791, 1154, 1348, 1624
Hpy188III TCNNGA 5 cut(s) 426, 693, 1720, 1774, 1937
Hpy8I GTNNAC 6 cut(s) 220, 730, 791, 1154, 1348, 1624
Hpy99I CGWCG 1 cut(s) 1557
HpyAV CCTTC 5 cut(s) 283, 1726, 1794, 1919, 2014
HpyCH4III ACNGT 5 cut(s) 499, 1367, 1672, 1843, 1964
HpyCH4IV ACGT 5 cut(s) 48, 128, 222, 1468, 1555
HpyF10VI GCNNNNNNNGC 1 cut(s) 1185
HpyF3I CTNAG 8 cut(s) 56, 270, 321, 775, 801, 1000, 1749, 2026
HpySE526I ACGT 5 cut(s) 48, 128, 222, 1468, 1555
Hsp92I GRCGYC 1 cut(s) 128
Hsp92II CATG 7 cut(s) 208, 370, 396, 566, 1385, 1857, 1903
Kpn2I TCCGGA 1 cut(s) 1773
KroI GCCGGC 1 cut(s) 624
KroNI GCCGGC 1 cut(s) 626
KspAI GTTAAC 1 cut(s) 730
Kzo9I GATC 4 cut(s) 246, 559, 985, 1081
LmnI GCTCC 5 cut(s) 30, 189, 330, 830, 1448
Lsp1109I GCAGC 6 cut(s) 63, 91, 931, 1197, 1422, 2057
LweI GCATC 9 cut(s) 499, 665, 701, 877, 956, 1117, 1334, 1432, 1609
MaeI CTAG 5 cut(s) 794, 933, 1164, 1472, 1497
MaeII ACGT 5 cut(s) 48, 128, 222, 1468, 1555
MaeIII GTNAC 4 cut(s) 448, 910, 1480, 1973
MalI GATC 4 cut(s) 248, 561, 987, 1083
MboI GATC 4 cut(s) 246, 559, 985, 1081
MflI RGATCY 1 cut(s) 246
MhlI GDGCHC 2 cut(s) 327, 1181
MluCI AATT 9 cut(s) 528, 611, 873, 925, 937, 1064, 1219, 1278, 1591
MlyI GAGTC 2 cut(s) 48, 187
MmeI TCCRAC 2 cut(s) 1660, 1864
Mph1103I ATGCAT 1 cut(s) 1327
MroI TCCGGA 1 cut(s) 1773
MroNI GCCGGC 1 cut(s) 624
MroXI GAANNNNTTC 1 cut(s) 2062
MslI CAYNNNNRTG 2 cut(s) 1428, 1750
MspR9I CCNGG 6 cut(s) 158, 175, 212, 621, 1086, 1980
Mva1269I GAATGC 3 cut(s) 1103, 1114, 1327
MvaI CCWGG 3 cut(s) 212, 621, 1980
MwoI GCNNNNNNNGC 1 cut(s) 1185
NaeI GCCGGC 1 cut(s) 626
NciI CCSGG 3 cut(s) 158, 175, 1086
NcoI CCATGG 1 cut(s) 1853
NdeII GATC 4 cut(s) 246, 559, 985, 1081
NgoMIV GCCGGC 1 cut(s) 624
NlaIII CATG 7 cut(s) 208, 370, 396, 566, 1385, 1857, 1903
NlaIV GGNNCC 7 cut(s) 26, 144, 832, 1089, 1291, 1761, 1851
NmeAIII GCCGAG 1 cut(s) 88
NmuCI GTSAC 4 cut(s) 448, 910, 1480, 1973
NsiI ATGCAT 1 cut(s) 1327
OliI CACNNNNGTG 1 cut(s) 1750
PceI AGGCCT 1 cut(s) 1929
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 3 cut(s) 1103, 1114, 1327
PdiI GCCGGC 1 cut(s) 626
PdmI GAANNNNTTC 1 cut(s) 2062
PfeI GAWTC 6 cut(s) 259, 274, 363, 970, 1246, 2008
PflFI GACNNNGTC 1 cut(s) 1986
PfoI TCCNGGA 1 cut(s) 173
PinAI ACCGGT 2 cut(s) 21, 631
PleI GAGTC 2 cut(s) 48, 186
PpsI GAGTC 2 cut(s) 48, 186
PshAI GACNNNNGTC 1 cut(s) 1689
Psp124BI GAGCTC 1 cut(s) 327
Psp6I CCWGG 3 cut(s) 210, 619, 1978
PspGI CCWGG 3 cut(s) 210, 619, 1978
PspN4I GGNNCC 7 cut(s) 26, 144, 832, 1089, 1291, 1761, 1851
PspPI GGNCC 6 cut(s) 19, 208, 571, 1088, 1567, 1849
PstI CTGCAG 1 cut(s) 81
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 1 cut(s) 246
PsyI GACNNNGTC 1 cut(s) 1986
RigI GGCCGGCC 1 cut(s) 628
RsaI GTAC 6 cut(s) 5, 185, 254, 344, 790, 1490
RsaNI GTAC 6 cut(s) 4, 184, 253, 343, 789, 1489
RseI CAYNNNNRTG 2 cut(s) 1428, 1750
SacI GAGCTC 1 cut(s) 327
Sau3AI GATC 4 cut(s) 246, 559, 985, 1081
Sau96I GGNCC 6 cut(s) 19, 208, 571, 1088, 1567, 1849
ScaI AGTACT 2 cut(s) 254, 344
SchI GAGTC 2 cut(s) 48, 187
ScrFI CCNGG 6 cut(s) 158, 175, 212, 621, 1086, 1980
SduI GDGCHC 2 cut(s) 327, 1181
SfaNI GCATC 9 cut(s) 499, 665, 701, 877, 956, 1117, 1334, 1432, 1609
SfcI CTRYAG 4 cut(s) 77, 750, 1387, 1617
SinI GGWCC 2 cut(s) 19, 1849
SmiMI CAYNNNNRTG 2 cut(s) 1428, 1750
Sse9I AATT 9 cut(s) 528, 611, 873, 925, 937, 1064, 1219, 1278, 1591
SseBI AGGCCT 1 cut(s) 1929
SsiI CCGC 6 cut(s) 146, 237, 266, 512, 843, 1420
SspI AATATT 1 cut(s) 382
SspMI CTAG 5 cut(s) 794, 933, 1164, 1472, 1497
SstI GAGCTC 1 cut(s) 327
StuI AGGCCT 1 cut(s) 1929
StyD4I CCNGG 6 cut(s) 156, 173, 210, 619, 1084, 1978
StyI CCWWGG 5 cut(s) 304, 555, 567, 1496, 1853
TaaI ACNGT 5 cut(s) 499, 1367, 1672, 1843, 1964
TaiI ACGT 5 cut(s) 51, 131, 225, 1471, 1558
TaqI TCGA 1 cut(s) 1697
TaqII GACCGA 2 cut(s) 113, 1837
TasI AATT 9 cut(s) 528, 611, 873, 925, 937, 1064, 1219, 1278, 1591
TatI WGTACW 2 cut(s) 252, 342
TauI GCSGC 3 cut(s) 269, 515, 1423
TfiI GAWTC 6 cut(s) 259, 274, 363, 970, 1246, 2008
TscAI CASTG 5 cut(s) 502, 648, 766, 1372, 1757
TseFI GTSAC 4 cut(s) 448, 910, 1480, 1973
TseI GCWGC 7 cut(s) 13, 76, 79, 919, 1185, 1435, 2045
Tsp45I GTSAC 4 cut(s) 448, 910, 1480, 1973
TspGWI ACGGA 2 cut(s) 59, 171
TspRI CASTG 5 cut(s) 502, 648, 766, 1372, 1757
Tth111I GACNNNGTC 1 cut(s) 1986
VpaK11BI GGWCC 2 cut(s) 19, 1849
XagI CCTNNNNNAGG 1 cut(s) 1009
XapI RAATTY 1 cut(s) 937
XcmI CCANNNNNNNNNTGG 1 cut(s) 617
XmaJI CCTAGG 1 cut(s) 1496
XmnI GAANNNNTTC 1 cut(s) 2062
XspI CTAG 5 cut(s) 794, 933, 1164, 1472, 1497
ZraI GACGTC 1 cut(s) 129
ZrmI AGTACT 2 cut(s) 254, 344
Zsp2I ATGCAT 1 cut(s) 1327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.