RLG00000003819

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0008078
Physical Location & Seq
Forward (+)
53094535 .. 53098713
4179 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003819

Sequence Viewer

Length: 2097 bp
ATGGCGGCGCGCGACTCGCAGGCGAGCATGTACCGACTGCTGCTGGACCGGTGCCAGAACTTGGAGGCCAGCCACGTCAGACTCAGAGCCGAGTTCCATGAGCTGCAGCACCACAACGAGAAGACCGAGGAGGATGAGGTGGTGCTGACGTCGGAGTTCTCGGTTCCGCACCGTGTCCAGGGGTTCTTCCTGTCCGGGAGTCCGTACCGGAGCATACTGGACAACATGGGCCACGCCGTCCACGTCTGCACGGCCTCCGCCGGAGAGATCCAGTACTGGAATCGTGCGGCTGAGAATCTCTATGGATGGAAGGACTATGAAGCCCTTGGACAAAGGGTTGCTGAGCTCCTCATTGCTGAAGAGTACTATGCACCTCTAAAGAGAATCATGGAAAGATTGAGTATTGGCTTATCATGGTCTGGTCAGTTTCCTTTCAAAAAGAGGTCCGGAGAGATATTTATGGCAATGGTGACAAAAAGCCCATTGTATGAGGATGGTGAGCTTGTTGGTATCATCACTGTTTCAAGTGATGCGGCATTGTTTAATAGAATTGAAGCAGAAAATCTGAGAACATCCAAGGATCATGCCAATGGCCAGCATAGGGGATGGCAGTTAAACTGGAACAAGAGCCAATTACACCCTGGCCGGCCACCGGTCGCACCAGTGCCACAGATTGCATCATCTGTTTCCAATCTGGCCTCCAAACTGCTATCACGAAATGATGACAATGGATGCAATCCACGTGAGGTTAACAAGGCAAGGGAGAACTCTACAGCAGACACTGGAAATGCTAACTTAGAGAAAGCTGGTACACTAGCATCTAAGTTCTTGGCAAAGTTGAAGATTAAAGGAGCCAACAAAGGTGGGAAAGAAGATTATGAAACATCTCAAAAAAGTGGCAGAAATGATGCTAATCTATTTAGAAATGAAGTGACAAAGCAGCCTAATTCCCCTGGAAATTCAAACGCATCAAGTGTATATGGGCATAAGAATCCGATTGATTTAGATGAGAGTTCTGTCTTAGCCTCTTCAAGGGAGTGCAATGAGTATATTGGGTTGCATAGACCAAATCATCTATTGCCAAAATTACACTATGCAAACGATCCGGGGCCTGAAGAATGCAACTTGAATGCTTCAGAGGTAGAAGATGCAGTGCAAAAACAACCAGATGGTCAACCATTACCTAGTTCAGCAGAGAGCACTCGCAGCCCCAGTAGTTCATCAAGCAAAGGGGATAATAATTCTACTTCCATAGGAGGTTGTGAGATTCGTTGGGAGGACTTACATTTGGGAGAGGAAATTGGACAAGGTTCCTGTGCTATTGTATATCGTGGAATCTGGAATGGATCGGGTGTTGCCATTAAGGTTTACTTTAAAAATGAATACAGTGAGGGGGTTTTGCATGACTACAGAAAGGAGATTGATATAATGAAAAGATTGCGGCATCCTAATGTGCTGCTATTTATGGGAGCAGTATATTCACAAGAACGTCTAGCTATTGTCACAGAGTACTTACCTAGGGGAAGTCTTTTCAGACAACTTCACAAAAACAATCAAGCATTGGATATTAAACGACGTATGAGGATGGCCCTTGATGTTGCGAGAGGTATGAATTACTTGCATCGTAGAAATCCACCTATAGTTCACAGAGACTTAAAATCGTCTAACTTGCTGGTTGATAAGAACTGGACTGTCAAGGTTGGAGACTTTGGTCTGTCGAAGTTAAAGAACGCAACCTTCTTGACTGCAAAATCTGGGAGAGGAACACCTCAGTGGATGGCACCTGAAGTCCTCCGAAATGAACCTTCAAATGAGAAGTCTGATGTATTTAGCTTTGGTGTCATCCTTTGGGAACTAATGACTGTATCGGTCCCATGGAATAACCTCAATCCCTTGCAGGTTGTTGGAGTTGTAGGCTTCATGGATAGAAGATTAGACATACCAGAAGGCCTCAATCCCGAAGTAGCATCCATTATTGAAGACTGTTGGCGAAGTGACCCGGGACAGCGTCCATCGTTTGAAGATGTGATTCAGAGAATGAAGGACGTAGTTATCAAAGTTGAAGCAGCTTCAGTAAGAAGAAGTTCAAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

699

Amino Acids

78.14

Weight (kDa)

7.32

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 69 - 174 7.9e-10 PAS fold
PAS_4 PF08448 73 - 177 1.7e-06 PAS fold
PAS_9 PF13426 82 - 177 1.4e-08 PAS domain
PK_Tyr_Ser-Thr PF07714 428 - 679 5.1e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 429 - 678 4.7e-54 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 152
Acc36I ACCTGC 1 cut(s) 1888
AccB1I GGYRCC 2 cut(s) 51, 1780
AccB7I CCANNNNNTGG 1 cut(s) 61
AccII CGCG 2 cut(s) 10, 12
AccIII TCCGGA 1 cut(s) 446
AciI CCGC 6 cut(s) 5, 167, 258, 287, 533, 1441
AclWI GGATC 4 cut(s) 262, 588, 1097, 1354
AcoI YGGCCR 3 cut(s) 592, 643, 647
AcsI RAATTY 1 cut(s) 958
AcuI CTGAAG 5 cut(s) 378, 1119, 1134, 1806, 2055
AcvI CACGTG 1 cut(s) 743
AcyI GRCGYC 1 cut(s) 149
AfaI GTAC 6 cut(s) 32, 206, 275, 365, 811, 1511
AfiI CCNNNNNNNGG 5 cut(s) 61, 178, 601, 652, 1032
AgeI ACCGGT 2 cut(s) 48, 652
AjiI CACGTC 2 cut(s) 76, 244
AjnI CCWGG 3 cut(s) 177, 640, 952
AleI CACNNNNGTG 1 cut(s) 1771
AluBI AGCT 7 cut(s) 103, 346, 502, 806, 1496, 1833, 2069
AluI AGCT 7 cut(s) 103, 346, 502, 806, 1496, 1833, 2069
Alw21I GWGCWC 2 cut(s) 348, 1202
Alw26I GTCTC 2 cut(s) 1644, 1698
AlwI GGATC 4 cut(s) 262, 588, 1097, 1354
AlwNI CAGNNNCTG 1 cut(s) 782
Ama87I CYCGRG 1 cut(s) 1999
Aor13HI TCCGGA 1 cut(s) 446
ApeKI GCWGC 7 cut(s) 40, 103, 106, 940, 1206, 1456, 2066
ApoI RAATTY 1 cut(s) 958
ArsI GACNNNNNNTTYG 2 cut(s) 1802, 1834
AsiGI ACCGGT 2 cut(s) 48, 652
Asp700I GAANNNNTTC 1 cut(s) 2083
AspA2I CCTAGG 1 cut(s) 1517
AspLEI GCGC 2 cut(s) 10, 12
AspS9I GGNCC 6 cut(s) 46, 229, 444, 1109, 1588, 1870
AsuC2I CCSGG 4 cut(s) 196, 1107, 2000, 2001
AsuHPI GGTGA 2 cut(s) 481, 509
AvaI CYCGRG 1 cut(s) 1999
AvaII GGWCC 3 cut(s) 46, 444, 1870
AvrII CCTAGG 1 cut(s) 1517
BalI TGGCCA 1 cut(s) 594
BanI GGYRCC 2 cut(s) 51, 1780
BanII GRGCYC 1 cut(s) 348
BbrPI CACGTG 1 cut(s) 743
BbsI GAAGAC 2 cut(s) 128, 1986
Bbv12I GWGCWC 2 cut(s) 348, 1202
BbvI GCAGC 7 cut(s) 27, 90, 118, 952, 1218, 1443, 2078
BccI CCATC 7 cut(s) 300, 488, 600, 1163, 1579, 1771, 2020
BceAI ACGGC 2 cut(s) 221, 267
BciT130I CCWGG 3 cut(s) 179, 642, 954
BcnI CCSGG 4 cut(s) 196, 1107, 2000, 2001
BcoDI GTCTC 2 cut(s) 1644, 1698
BfaI CTAG 4 cut(s) 815, 1185, 1493, 1518
BfmI CTRYAG 4 cut(s) 104, 771, 1408, 1638
BfuAI ACCTGC 1 cut(s) 1888
BlnI CCTAGG 1 cut(s) 1517
BlpI GCTNAGC 1 cut(s) 342
BmcAI AGTACT 3 cut(s) 275, 365, 1511
Bme1390I CCNGG 7 cut(s) 179, 196, 642, 954, 1107, 2000, 2001
Bme18I GGWCC 3 cut(s) 46, 444, 1870
BmeT110I CYCGRG 1 cut(s) 1999
BmgBI CACGTC 2 cut(s) 76, 244
BmgT120I GGNCC 6 cut(s) 46, 229, 444, 1109, 1588, 1870
BmiI GGNNCC 7 cut(s) 53, 165, 853, 1110, 1312, 1782, 1872
BmrFI CCNGG 7 cut(s) 179, 196, 642, 954, 1107, 2000, 2001
BmrI ACTGGG 1 cut(s) 1206
BmuI ACTGGG 1 cut(s) 1206
BoxI GACNNNNGTC 1 cut(s) 1710
BpiI GAAGAC 2 cut(s) 128, 1986
Bpu1102I GCTNAGC 1 cut(s) 342
BpuMI CCSGG 4 cut(s) 196, 1107, 2000, 2001
BsaAI YACGTR 1 cut(s) 743
BsaBI GATNNNNATC 1 cut(s) 912
BsaHI GRCGYC 1 cut(s) 149
BsaWI WCCGGW 4 cut(s) 48, 207, 446, 652
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 178, 601, 652, 1032
Bse118I RCCGGY 3 cut(s) 48, 645, 652
Bse1I ACTGG 8 cut(s) 222, 271, 281, 623, 662, 787, 1212, 1691
Bse3DI GCAATG 3 cut(s) 351, 471, 1048
Bse8I GATNNNNATC 1 cut(s) 912
BseAI TCCGGA 1 cut(s) 446
BseBI CCWGG 3 cut(s) 179, 642, 954
BseJI GATNNNNATC 1 cut(s) 912
BseLI CCNNNNNNNGG 5 cut(s) 61, 178, 601, 652, 1032
BseMI GCAATG 3 cut(s) 351, 471, 1048
BseMII CTCAG 5 cut(s) 97, 282, 333, 557, 1784
BseNI ACTGG 8 cut(s) 222, 271, 281, 623, 662, 787, 1212, 1691
BsePI GCGCGC 1 cut(s) 8
BseRI GAGGAG 2 cut(s) 143, 338
BseXI GCAGC 7 cut(s) 27, 90, 118, 952, 1218, 1443, 2078
BsgI GTGCAG 1 cut(s) 232
Bsh1236I CGCG 2 cut(s) 10, 12
Bsh1285I CGRYCG 1 cut(s) 657
BshNI GGYRCC 2 cut(s) 51, 1780
BshTI ACCGGT 2 cut(s) 48, 652
BsiEI CGRYCG 1 cut(s) 657
BsiHKAI GWGCWC 2 cut(s) 348, 1202
BsiHKCI CYCGRG 1 cut(s) 1999
BsiSI CCGG 9 cut(s) 49, 195, 208, 261, 447, 646, 653, 1106, 2000
BslFI GGGAC 2 cut(s) 1856, 2016
BslI CCNNNNNNNGG 5 cut(s) 61, 178, 601, 652, 1032
BsmAI GTCTC 2 cut(s) 1644, 1698
BsmFI GGGAC 2 cut(s) 1856, 2016
BsmI GAATGC 2 cut(s) 1124, 1135
BsoBI CYCGRG 1 cut(s) 1999
Bsp1286I GDGCHC 2 cut(s) 348, 1202
Bsp13I TCCGGA 1 cut(s) 446
Bsp143I GATC 4 cut(s) 267, 580, 1102, 1346
Bsp1720I GCTNAGC 1 cut(s) 342
Bsp19I CCATGG 1 cut(s) 1874
BspACI CCGC 6 cut(s) 5, 167, 258, 287, 533, 1441
BspCNI CTCAG 5 cut(s) 96, 283, 334, 558, 1783
BspEI TCCGGA 1 cut(s) 446
BspFNI CGCG 2 cut(s) 10, 12
BspLI GGNNCC 7 cut(s) 53, 165, 853, 1110, 1312, 1782, 1872
BspMAI CTGCAG 1 cut(s) 108
BspMI ACCTGC 1 cut(s) 1888
BspPI GGATC 4 cut(s) 262, 588, 1097, 1354
BspT107I GGYRCC 2 cut(s) 51, 1780
BsrDI GCAATG 3 cut(s) 351, 471, 1048
BsrFI RCCGGY 3 cut(s) 48, 645, 652
BsrI ACTGG 8 cut(s) 222, 271, 281, 623, 662, 787, 1212, 1691
BssAI RCCGGY 3 cut(s) 48, 645, 652
BssHII GCGCGC 1 cut(s) 8
BssMI GATC 4 cut(s) 267, 580, 1102, 1346
BssNI GRCGYC 1 cut(s) 149
BssT1I CCWWGG 4 cut(s) 325, 576, 1517, 1874
Bst2UI CCWGG 3 cut(s) 179, 642, 954
Bst4CI ACNGT 6 cut(s) 173, 520, 1388, 1693, 1864, 1985
Bst6I CTCTTC 2 cut(s) 354, 1033
BstACI GRCGYC 1 cut(s) 149
BstBAI YACGTR 1 cut(s) 743
BstC8I GCNNGC 6 cut(s) 10, 21, 25, 70, 596, 647
BstDEI CTNAG 8 cut(s) 83, 291, 342, 566, 796, 822, 1021, 1770
BstDSI CCRYGG 1 cut(s) 1874
BstENI CCTNNNNNAGG 1 cut(s) 1030
BstFNI CGCG 2 cut(s) 10, 12
BstHHI GCGC 2 cut(s) 10, 12
BstKTI GATC 4 cut(s) 270, 583, 1105, 1349
BstMAI GTCTC 2 cut(s) 1644, 1698
BstMBI GATC 4 cut(s) 267, 580, 1102, 1346
BstMCI CGRYCG 1 cut(s) 657
BstMWI GCNNNNNNNGC 2 cut(s) 16, 1206
BstNI CCWGG 3 cut(s) 179, 642, 954
BstNSI RCATGY 1 cut(s) 31
BstPAI GACNNNNGTC 1 cut(s) 1710
BstSCI CCNGG 7 cut(s) 177, 194, 640, 952, 1105, 1998, 1999
BstSFI CTRYAG 4 cut(s) 104, 771, 1408, 1638
BstUI CGCG 2 cut(s) 10, 12
BstV1I GCAGC 7 cut(s) 27, 90, 118, 952, 1218, 1443, 2078
BstV2I GAAGAC 2 cut(s) 128, 1986
BstX2I RGATCY 1 cut(s) 267
BstYI RGATCY 1 cut(s) 267
BtgI CCRYGG 1 cut(s) 1874
BtrI CACGTC 2 cut(s) 76, 244
BtsI GCAGTG 1 cut(s) 1158
BtsIMutI CAGTG 6 cut(s) 516, 669, 780, 1158, 1393, 1778
BveI ACCTGC 1 cut(s) 1888
Cac8I GCNNGC 6 cut(s) 10, 21, 25, 70, 596, 647
CaiI CAGNNNCTG 1 cut(s) 782
CfoI GCGC 2 cut(s) 10, 12
Cfr10I RCCGGY 3 cut(s) 48, 645, 652
Cfr13I GGNCC 6 cut(s) 46, 229, 444, 1109, 1588, 1870
Cfr9I CCCGGG 1 cut(s) 1999
CseI GACGC 1 cut(s) 1997
Csp6I GTAC 6 cut(s) 31, 205, 274, 364, 810, 1510
CspAI ACCGGT 2 cut(s) 48, 652
CspCI CAANNNNNGTGG 2 cut(s) 844, 879
CviAII CATG 9 cut(s) 28, 98, 226, 388, 414, 584, 1403, 1875, 1921
CviQI GTAC 6 cut(s) 31, 205, 274, 364, 810, 1510
DdeI CTNAG 8 cut(s) 83, 291, 342, 566, 796, 822, 1021, 1770
DpnI GATC 4 cut(s) 269, 582, 1104, 1348
DpnII GATC 4 cut(s) 267, 580, 1102, 1346
DraI TTTAAA 1 cut(s) 1375
EaeI YGGCCR 3 cut(s) 592, 643, 647
Eam1104I CTCTTC 2 cut(s) 354, 1033
EarI CTCTTC 2 cut(s) 354, 1033
EciI GGCGGA 1 cut(s) 247
Ecl136II GAGCTC 1 cut(s) 346
Eco130I CCWWGG 4 cut(s) 325, 576, 1517, 1874
Eco147I AGGCCT 1 cut(s) 1950
Eco24I GRGCYC 1 cut(s) 348
Eco47I GGWCC 3 cut(s) 46, 444, 1870
Eco53kI GAGCTC 1 cut(s) 346
Eco57I CTGAAG 5 cut(s) 378, 1119, 1134, 1806, 2055
Eco72I CACGTG 1 cut(s) 743
Eco88I CYCGRG 1 cut(s) 1999
EcoICRI GAGCTC 1 cut(s) 346
EcoNI CCTNNNNNAGG 1 cut(s) 1030
EcoO109I RGGNCCY 1 cut(s) 1109
EcoRII CCWGG 3 cut(s) 177, 640, 952
EcoT14I CCWWGG 4 cut(s) 325, 576, 1517, 1874
EcoT38I GRGCYC 1 cut(s) 348
ErhI CCWWGG 4 cut(s) 325, 576, 1517, 1874
FaeI CATG 9 cut(s) 31, 101, 229, 391, 417, 587, 1406, 1878, 1924
FalI AAGNNNNNCTT 2 cut(s) 1355, 1387
FaqI GGGAC 2 cut(s) 1856, 2016
FatI CATG 9 cut(s) 27, 97, 225, 387, 413, 583, 1402, 1874, 1920
FriOI GRGCYC 1 cut(s) 348
FseI GGCCGGCC 1 cut(s) 649
FspBI CTAG 4 cut(s) 815, 1185, 1493, 1518
GlaI GCGC 2 cut(s) 9, 11
HapII CCGG 9 cut(s) 49, 195, 208, 261, 447, 646, 653, 1106, 2000
HgaI GACGC 1 cut(s) 1997
HhaI GCGC 2 cut(s) 10, 12
Hin1I GRCGYC 1 cut(s) 149
Hin1II CATG 9 cut(s) 31, 101, 229, 391, 417, 587, 1406, 1878, 1924
Hin6I GCGC 2 cut(s) 8, 10
HinP1I GCGC 2 cut(s) 8, 10
HincII GTYRAC 2 cut(s) 751, 1175
HindII GTYRAC 2 cut(s) 751, 1175
HpaI GTTAAC 1 cut(s) 751
HpaII CCGG 9 cut(s) 49, 195, 208, 261, 447, 646, 653, 1106, 2000
HphI GGTGA 2 cut(s) 481, 509
Hpy166II GTNNAC 6 cut(s) 241, 751, 812, 1175, 1369, 1645
Hpy188III TCNNGA 5 cut(s) 447, 714, 1339, 1741, 1958
Hpy8I GTNNAC 6 cut(s) 241, 751, 812, 1175, 1369, 1645
Hpy99I CGWCG 2 cut(s) 154, 1578
HpyAV CCTTC 5 cut(s) 304, 1747, 1815, 1940, 2035
HpyCH4III ACNGT 6 cut(s) 173, 520, 1388, 1693, 1864, 1985
HpyCH4IV ACGT 7 cut(s) 75, 149, 243, 742, 1489, 1576, 2046
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 1206
HpyF3I CTNAG 8 cut(s) 83, 291, 342, 566, 796, 822, 1021, 1770
HpySE526I ACGT 7 cut(s) 75, 149, 243, 742, 1489, 1576, 2046
Hsp92I GRCGYC 1 cut(s) 149
Hsp92II CATG 9 cut(s) 31, 101, 229, 391, 417, 587, 1406, 1878, 1924
HspAI GCGC 2 cut(s) 8, 10
Kpn2I TCCGGA 1 cut(s) 446
KroI GCCGGC 1 cut(s) 645
KroNI GCCGGC 1 cut(s) 647
KspAI GTTAAC 1 cut(s) 751
Kzo9I GATC 4 cut(s) 267, 580, 1102, 1346
LmnI GCTCC 4 cut(s) 210, 351, 851, 1469
Lsp1109I GCAGC 7 cut(s) 27, 90, 118, 952, 1218, 1443, 2078
MaeI CTAG 4 cut(s) 815, 1185, 1493, 1518
MaeII ACGT 7 cut(s) 75, 149, 243, 742, 1489, 1576, 2046
MaeIII GTNAC 4 cut(s) 469, 931, 1501, 1994
MalI GATC 4 cut(s) 269, 582, 1104, 1348
MboI GATC 4 cut(s) 267, 580, 1102, 1346
MflI RGATCY 1 cut(s) 267
MhlI GDGCHC 2 cut(s) 348, 1202
MlsI TGGCCA 1 cut(s) 594
MluCI AATT 8 cut(s) 549, 632, 946, 958, 1085, 1240, 1299, 1612
MluNI TGGCCA 1 cut(s) 594
MlyI GAGTC 3 cut(s) 8, 75, 208
MmeI TCCRAC 3 cut(s) 132, 1681, 1885
Mox20I TGGCCA 1 cut(s) 594
MroI TCCGGA 1 cut(s) 446
MroNI GCCGGC 1 cut(s) 645
MroXI GAANNNNTTC 1 cut(s) 2083
MscI TGGCCA 1 cut(s) 594
MseI TTAA 9 cut(s) 543, 614, 750, 846, 1362, 1374, 1569, 1655, 1724
MslI CAYNNNNRTG 3 cut(s) 588, 1449, 1771
Msp20I TGGCCA 1 cut(s) 594
MspI CCGG 9 cut(s) 49, 195, 208, 261, 447, 646, 653, 1106, 2000
MspR9I CCNGG 7 cut(s) 179, 196, 642, 954, 1107, 2000, 2001
Mva1269I GAATGC 2 cut(s) 1124, 1135
MvaI CCWGG 3 cut(s) 179, 642, 954
MvnI CGCG 2 cut(s) 10, 12
MwoI GCNNNNNNNGC 2 cut(s) 16, 1206
NaeI GCCGGC 1 cut(s) 647
NciI CCSGG 4 cut(s) 196, 1107, 2000, 2001
NcoI CCATGG 1 cut(s) 1874
NdeII GATC 4 cut(s) 267, 580, 1102, 1346
NgoMIV GCCGGC 1 cut(s) 645
NlaIII CATG 9 cut(s) 31, 101, 229, 391, 417, 587, 1406, 1878, 1924
NlaIV GGNNCC 7 cut(s) 53, 165, 853, 1110, 1312, 1782, 1872
NmeAIII GCCGAG 1 cut(s) 115
NmuCI GTSAC 4 cut(s) 469, 931, 1501, 1994
NspI RCATGY 1 cut(s) 31
OliI CACNNNNGTG 1 cut(s) 1771
PauI GCGCGC 1 cut(s) 8
PceI AGGCCT 1 cut(s) 1950
PcsI WCGNNNNNNNCGW 2 cut(s) 123, 240
PctI GAATGC 2 cut(s) 1124, 1135
PdiI GCCGGC 1 cut(s) 647
PdmI GAANNNNTTC 1 cut(s) 2083
PfeI GAWTC 7 cut(s) 280, 295, 384, 991, 1267, 1335, 2029
PflFI GACNNNGTC 1 cut(s) 2007
PflMI CCANNNNNTGG 1 cut(s) 61
PfoI TCCNGGA 1 cut(s) 194
PinAI ACCGGT 2 cut(s) 48, 652
PleI GAGTC 3 cut(s) 8, 75, 207
PmaCI CACGTG 1 cut(s) 743
PmlI CACGTG 1 cut(s) 743
PpsI GAGTC 3 cut(s) 8, 75, 207
Ppu21I YACGTR 1 cut(s) 743
PshAI GACNNNNGTC 1 cut(s) 1710
Psp124BI GAGCTC 1 cut(s) 348
Psp6I CCWGG 3 cut(s) 177, 640, 952
PspCI CACGTG 1 cut(s) 743
PspGI CCWGG 3 cut(s) 177, 640, 952
PspN4I GGNNCC 7 cut(s) 53, 165, 853, 1110, 1312, 1782, 1872
PspPI GGNCC 6 cut(s) 46, 229, 444, 1109, 1588, 1870
PstI CTGCAG 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 267
PsyI GACNNNGTC 1 cut(s) 2007
PteI GCGCGC 1 cut(s) 8
RigI GGCCGGCC 1 cut(s) 649
RsaI GTAC 6 cut(s) 32, 206, 275, 365, 811, 1511
RsaNI GTAC 6 cut(s) 31, 205, 274, 364, 810, 1510
RseI CAYNNNNRTG 3 cut(s) 588, 1449, 1771
SacI GAGCTC 1 cut(s) 348
SaqAI TTAA 9 cut(s) 543, 614, 750, 846, 1362, 1374, 1569, 1655, 1724
Sau3AI GATC 4 cut(s) 267, 580, 1102, 1346
Sau96I GGNCC 6 cut(s) 46, 229, 444, 1109, 1588, 1870
ScaI AGTACT 3 cut(s) 275, 365, 1511
SchI GAGTC 3 cut(s) 8, 75, 208
ScrFI CCNGG 7 cut(s) 179, 196, 642, 954, 1107, 2000, 2001
SduI GDGCHC 2 cut(s) 348, 1202
SfcI CTRYAG 4 cut(s) 104, 771, 1408, 1638
SinI GGWCC 3 cut(s) 46, 444, 1870
SmaI CCCGGG 1 cut(s) 2001
SmiMI CAYNNNNRTG 3 cut(s) 588, 1449, 1771
Sse9I AATT 8 cut(s) 549, 632, 946, 958, 1085, 1240, 1299, 1612
SseBI AGGCCT 1 cut(s) 1950
SsiI CCGC 6 cut(s) 5, 167, 258, 287, 533, 1441
SspMI CTAG 4 cut(s) 815, 1185, 1493, 1518
SstI GAGCTC 1 cut(s) 348
StuI AGGCCT 1 cut(s) 1950
StyD4I CCNGG 7 cut(s) 177, 194, 640, 952, 1105, 1998, 1999
StyI CCWWGG 4 cut(s) 325, 576, 1517, 1874
TaaI ACNGT 6 cut(s) 173, 520, 1388, 1693, 1864, 1985
TaiI ACGT 7 cut(s) 78, 152, 246, 745, 1492, 1579, 2049
TaqI TCGA 1 cut(s) 1718
TaqII GACCGA 2 cut(s) 140, 1858
TasI AATT 8 cut(s) 549, 632, 946, 958, 1085, 1240, 1299, 1612
TatI WGTACW 3 cut(s) 273, 363, 1509
TauI GCSGC 4 cut(s) 8, 290, 536, 1444
TfiI GAWTC 7 cut(s) 280, 295, 384, 991, 1267, 1335, 2029
Tru1I TTAA 9 cut(s) 543, 614, 750, 846, 1362, 1374, 1569, 1655, 1724
Tru9I TTAA 9 cut(s) 543, 614, 750, 846, 1362, 1374, 1569, 1655, 1724
TscAI CASTG 6 cut(s) 523, 669, 787, 1158, 1393, 1778
TseFI GTSAC 4 cut(s) 469, 931, 1501, 1994
TseI GCWGC 7 cut(s) 40, 103, 106, 940, 1206, 1456, 2066
Tsp45I GTSAC 4 cut(s) 469, 931, 1501, 1994
TspGWI ACGGA 1 cut(s) 192
TspMI CCCGGG 1 cut(s) 1999
TspRI CASTG 6 cut(s) 523, 669, 787, 1158, 1393, 1778
Tth111I GACNNNGTC 1 cut(s) 2007
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 3 cut(s) 46, 444, 1870
XagI CCTNNNNNAGG 1 cut(s) 1030
XapI RAATTY 1 cut(s) 958
XceI RCATGY 1 cut(s) 31
XcmI CCANNNNNNNNNTGG 1 cut(s) 638
XmaI CCCGGG 1 cut(s) 1999
XmaJI CCTAGG 1 cut(s) 1517
XmnI GAANNNNTTC 1 cut(s) 2083
XspI CTAG 4 cut(s) 815, 1185, 1493, 1518
ZraI GACGTC 1 cut(s) 150
ZrmI AGTACT 3 cut(s) 275, 365, 1511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.