Rh7BG178900

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0008078
Physical Location & Seq
Reverse (-)
14144924 .. 14149078
4155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG178900.1

Sequence Viewer

Length: 2109 bp
ATGGCGGCGCGCGACTCGCAGGCGAGCATGTACCGACTGCTGCTGGACCGGTGCCAGAGCTTGGAGGCCAGCCACGTCAGACTCAGAGCCGAGTTCCATGAGCTGCAGCACCACAACGAGAAGACCGAGGAGGAGGAGGATGATGCGATGCTGACGTCAGAGTTCTCGGTTCCGCACCGTGTCCGGGGGTTCTTCCTGTCCGGGAGTCCGTACCGGAGCATACTGGACAACATGGGCCACGCCGTCCACGTCTGCACGGCCTCCGCCGGAGAGATCCAGTACTGGAATCGTGCGGCTGAGAATCTCTATGGATGGAAGGACTATGAAGCCCTTGGACAAAGGGTTGCTGAGCTCCTCATTGCTGAAGAGTACTATGCACATTTAAAGAGAATCATGGAAAGATTGAATATTGGCTTATCATGGTCAGGTCAGTTTCCTTTCAAAAAGAGGTCGGGAGAGATATTTATGGCAATGGTGACAAAAAGCCCATTGTATGAGGATGGTGAGCTTGTTGGTATCATCACTGTTTCAAGTGATGCGGCATTGTTTAATAGAGTTGAAGCAGAAAATCTGAGAACATCCAAGGATCATGCCAATGGCCAACATAAGGGATGGCAGTTAAACTGGAACAAGAGCCAATTACACCCTGGCCGGCCACCGGTCGCACCAGTGCCACAGATTGCATCATCTGTTTCCAATCTGGCCTCCAAACTGCTATCACGAAATGATGACAATGGATGCAATCCAAGTGAGGTTAACAAGGCAAGGGAGAACTCTACAGCAGACACTGGAAATGCTAACTTAGAGAAAGCTGGTACACTAGCGTCTAAGTTCTTGGCAAAGTTGAACATTAAAGGAGCCAACAAAGGTGGGAAAGAAGATTATGAAACATCTCAAAAAAATGGCAGAAATGATGCTAATCTATTTAGCAATGAAGTGACAAAGCAGCCTAATTCCCCTAGAAATTCAAACGCATCAAGTGTATATGGGCATAAGAATCCGATTGATTTAGATGAGAGTTCTGTCTTAGCCTCTTCAAGGGAGTGCAATGAGTATATTGGGTTGCATAGACCAAATCATCTATTGCCAAAATTACACTATGCAAATGATCCGGGGCCTGAAGAATGCAACTTGAATGCTTCAGAGGTAGAAGATGCAATGCAAAAACAACCAGATGGTCAACCATTACCTAGTTCAGCAGAGAGCACTCGCAGCCCCAGTAGTTCATCAAGCAAAGGGGTTATTAATTCTACTTCCATAGGAGGTTGTGAGATTCGTTGGGAGGACTTACATTTGGGAGAGGAAATTGGACAAGGTTCCTGTGCTATTGTATATCGTGGAATCTGGAATGGATCGGATGTTGCCATTAAGGTTTACTTTAAAAATGAATACAGTGAGGGGGTTTTGCATGACTACAGAAAGGAGATTGATATAATGAAAAGATTGCGGCATCCTAATGTGCTGCTATTTATGGGAGCAGTATATTCACAAGAACGTCTAGCTATTGTCACAGAGTACCTACCTAGGGGAAGTCTTTTCAGACAACTTCACAAAAACAATCAAGCATTGGATATTAAACGACGTATGAGGATGGCCCTTGATGTTGCGAGAGGTATGAATTACTTGCATCGTAGAAATCCACCTATAGTTCACAGAGACTTAAAATCGTCTAACTTGCTGGTTGATAAGAACTGGACTGTCAAGGTTGGAGACTTTGGTCTGTCGAAGTTAAAGAACGCAACCTTCTTGACTGCAAAATCTGGGAGAGGAACACCTCAGTGGATGGCACCTGAAGTCCTCCGAAATGAACCTTCAAATGAGAAGTCTGATGTATTTAGCTTTGGTGTCATCCTTTGGGAACTAATGACTGTATCGGTCCCATGGAATAACCTCAATCCCTTGCAGGTTGTTGGAGTTGTAGGCTTCATGGATAGAAGACTAGACATACCAGAAGGCCTCAATCCCGAAGTAGTATCCATTATTGAAGACTGTTGGCGAAGTGACCCGGGACAGCGTCCATCGTTTGAAGATGTGATTCAGAGAATGAAGGACGTAGTTATCAAAGTTGAAGCAGCTTCAGTAAGAAGAAAGTTCAAACCCTTGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

702

Amino Acids

78.83

Weight (kDa)

7.08

Isoelectric Point (pI)

47.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 71 - 176 1.1e-10 PAS fold
PAS_4 PF08448 75 - 179 7.5e-06 PAS fold
PAS_9 PF13426 84 - 179 1.2e-08 PAS domain
PK_Tyr_Ser-Thr PF07714 430 - 681 2.2e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 431 - 680 3.9e-54 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 158
Acc36I ACCTGC 1 cut(s) 1894
AccB1I GGYRCC 2 cut(s) 51, 1786
AccB7I CCANNNNNTGG 1 cut(s) 61
AccII CGCG 2 cut(s) 10, 12
AciI CCGC 6 cut(s) 5, 173, 264, 293, 539, 1447
AclWI GGATC 4 cut(s) 268, 594, 1103, 1360
AcoI YGGCCR 3 cut(s) 598, 649, 653
AcsI RAATTY 1 cut(s) 964
AcuI CTGAAG 5 cut(s) 384, 1125, 1140, 1812, 2061
AcyI GRCGYC 1 cut(s) 155
AfaI GTAC 6 cut(s) 32, 212, 281, 371, 817, 1517
AfiI CCNNNNNNNGG 6 cut(s) 61, 184, 607, 658, 1038, 1525
AgeI ACCGGT 2 cut(s) 48, 658
AjiI CACGTC 2 cut(s) 76, 250
AjnI CCWGG 1 cut(s) 646
AleI CACNNNNGTG 1 cut(s) 1777
AluBI AGCT 8 cut(s) 60, 103, 352, 508, 812, 1502, 1839, 2075
AluI AGCT 8 cut(s) 60, 103, 352, 508, 812, 1502, 1839, 2075
Alw21I GWGCWC 2 cut(s) 354, 1208
Alw26I GTCTC 2 cut(s) 1650, 1704
AlwI GGATC 4 cut(s) 268, 594, 1103, 1360
AlwNI CAGNNNCTG 1 cut(s) 788
Ama87I CYCGRG 1 cut(s) 2005
ApeKI GCWGC 7 cut(s) 40, 103, 106, 946, 1212, 1462, 2072
ApoI RAATTY 1 cut(s) 964
ArsI GACNNNNNNTTYG 2 cut(s) 1808, 1840
AseI ATTAAT 1 cut(s) 1245
AsiGI ACCGGT 2 cut(s) 48, 658
AspA2I CCTAGG 1 cut(s) 1523
AspLEI GCGC 2 cut(s) 10, 12
AspS9I GGNCC 5 cut(s) 46, 235, 1115, 1594, 1876
AsuC2I CCSGG 5 cut(s) 185, 202, 1113, 2006, 2007
AsuHPI GGTGA 2 cut(s) 487, 515
AvaI CYCGRG 1 cut(s) 2005
AvaII GGWCC 2 cut(s) 46, 1876
AvrII CCTAGG 1 cut(s) 1523
BalI TGGCCA 1 cut(s) 600
BanI GGYRCC 2 cut(s) 51, 1786
BanII GRGCYC 1 cut(s) 354
BbsI GAAGAC 3 cut(s) 128, 1942, 1992
Bbv12I GWGCWC 2 cut(s) 354, 1208
BbvI GCAGC 7 cut(s) 27, 90, 118, 958, 1224, 1449, 2084
BccI CCATC 7 cut(s) 306, 494, 606, 1169, 1585, 1777, 2026
BceAI ACGGC 2 cut(s) 227, 273
BciT130I CCWGG 1 cut(s) 648
BciVI GTATCC 1 cut(s) 1984
BcnI CCSGG 5 cut(s) 185, 202, 1113, 2006, 2007
BcoDI GTCTC 2 cut(s) 1650, 1704
BfaI CTAG 6 cut(s) 821, 960, 1191, 1499, 1524, 1940
BfmI CTRYAG 4 cut(s) 104, 777, 1414, 1644
BfuAI ACCTGC 1 cut(s) 1894
BfuI GTATCC 1 cut(s) 1984
BlnI CCTAGG 1 cut(s) 1523
BlpI GCTNAGC 1 cut(s) 348
BmcAI AGTACT 2 cut(s) 281, 371
Bme1390I CCNGG 6 cut(s) 185, 202, 648, 1113, 2006, 2007
Bme18I GGWCC 2 cut(s) 46, 1876
BmeT110I CYCGRG 1 cut(s) 2005
BmgBI CACGTC 2 cut(s) 76, 250
BmgT120I GGNCC 5 cut(s) 46, 235, 1115, 1594, 1876
BmiI GGNNCC 7 cut(s) 53, 171, 859, 1116, 1318, 1788, 1878
BmrFI CCNGG 6 cut(s) 185, 202, 648, 1113, 2006, 2007
BmrI ACTGGG 1 cut(s) 1212
BmuI ACTGGG 1 cut(s) 1212
BoxI GACNNNNGTC 1 cut(s) 1716
BpiI GAAGAC 3 cut(s) 128, 1942, 1992
Bpu1102I GCTNAGC 1 cut(s) 348
BpuMI CCSGG 5 cut(s) 185, 202, 1113, 2006, 2007
BsaBI GATNNNNATC 1 cut(s) 918
BsaHI GRCGYC 1 cut(s) 155
BsaJI CCNNGG 9 cut(s) 126, 184, 331, 582, 646, 1112, 1523, 1880, 2005
BsaWI WCCGGW 3 cut(s) 48, 213, 658
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 184, 607, 658, 1038, 1525
Bse118I RCCGGY 3 cut(s) 48, 651, 658
Bse1I ACTGG 8 cut(s) 228, 277, 287, 629, 668, 793, 1218, 1697
Bse3DI GCAATG 5 cut(s) 357, 477, 937, 1054, 1164
Bse8I GATNNNNATC 1 cut(s) 918
BseBI CCWGG 1 cut(s) 648
BseDI CCNNGG 9 cut(s) 126, 184, 331, 582, 646, 1112, 1523, 1880, 2005
BseJI GATNNNNATC 1 cut(s) 918
BseLI CCNNNNNNNGG 6 cut(s) 61, 184, 607, 658, 1038, 1525
BseMI GCAATG 5 cut(s) 357, 477, 937, 1054, 1164
BseMII CTCAG 5 cut(s) 97, 288, 339, 563, 1790
BseNI ACTGG 8 cut(s) 228, 277, 287, 629, 668, 793, 1218, 1697
BsePI GCGCGC 1 cut(s) 8
BseRI GAGGAG 4 cut(s) 143, 146, 149, 344
BseXI GCAGC 7 cut(s) 27, 90, 118, 958, 1224, 1449, 2084
BsgI GTGCAG 1 cut(s) 238
Bsh1236I CGCG 2 cut(s) 10, 12
Bsh1285I CGRYCG 1 cut(s) 663
BshNI GGYRCC 2 cut(s) 51, 1786
BshTI ACCGGT 2 cut(s) 48, 658
BsiEI CGRYCG 1 cut(s) 663
BsiHKAI GWGCWC 2 cut(s) 354, 1208
BsiHKCI CYCGRG 1 cut(s) 2005
BsiSI CCGG 9 cut(s) 49, 184, 201, 214, 267, 652, 659, 1112, 2006
BslFI GGGAC 2 cut(s) 1862, 2022
BslI CCNNNNNNNGG 6 cut(s) 61, 184, 607, 658, 1038, 1525
BsmAI GTCTC 2 cut(s) 1650, 1704
BsmFI GGGAC 2 cut(s) 1862, 2022
BsmI GAATGC 2 cut(s) 1130, 1141
BsoBI CYCGRG 1 cut(s) 2005
Bsp1286I GDGCHC 2 cut(s) 354, 1208
Bsp143I GATC 4 cut(s) 273, 586, 1108, 1352
Bsp1720I GCTNAGC 1 cut(s) 348
Bsp19I CCATGG 1 cut(s) 1880
BspACI CCGC 6 cut(s) 5, 173, 264, 293, 539, 1447
BspCNI CTCAG 5 cut(s) 96, 289, 340, 564, 1789
BspFNI CGCG 2 cut(s) 10, 12
BspLI GGNNCC 7 cut(s) 53, 171, 859, 1116, 1318, 1788, 1878
BspMAI CTGCAG 1 cut(s) 108
BspMI ACCTGC 1 cut(s) 1894
BspPI GGATC 4 cut(s) 268, 594, 1103, 1360
BspT107I GGYRCC 2 cut(s) 51, 1786
BsrDI GCAATG 5 cut(s) 357, 477, 937, 1054, 1164
BsrFI RCCGGY 3 cut(s) 48, 651, 658
BsrI ACTGG 8 cut(s) 228, 277, 287, 629, 668, 793, 1218, 1697
BssAI RCCGGY 3 cut(s) 48, 651, 658
BssECI CCNNGG 9 cut(s) 126, 184, 331, 582, 646, 1112, 1523, 1880, 2005
BssHII GCGCGC 1 cut(s) 8
BssMI GATC 4 cut(s) 273, 586, 1108, 1352
BssNI GRCGYC 1 cut(s) 155
BssT1I CCWWGG 4 cut(s) 331, 582, 1523, 1880
Bst2UI CCWGG 1 cut(s) 648
Bst4CI ACNGT 6 cut(s) 179, 526, 1394, 1699, 1870, 1991
Bst6I CTCTTC 2 cut(s) 360, 1039
BstACI GRCGYC 1 cut(s) 155
BstC8I GCNNGC 5 cut(s) 10, 21, 25, 70, 653
BstDEI CTNAG 8 cut(s) 83, 297, 348, 572, 802, 828, 1027, 1776
BstDSI CCRYGG 1 cut(s) 1880
BstENI CCTNNNNNAGG 1 cut(s) 1036
BstFNI CGCG 2 cut(s) 10, 12
BstHHI GCGC 2 cut(s) 10, 12
BstKTI GATC 4 cut(s) 276, 589, 1111, 1355
BstMAI GTCTC 2 cut(s) 1650, 1704
BstMBI GATC 4 cut(s) 273, 586, 1108, 1352
BstMCI CGRYCG 1 cut(s) 663
BstMWI GCNNNNNNNGC 2 cut(s) 16, 1212
BstNI CCWGG 1 cut(s) 648
BstNSI RCATGY 1 cut(s) 31
BstPAI GACNNNNGTC 1 cut(s) 1716
BstSCI CCNGG 6 cut(s) 183, 200, 646, 1111, 2004, 2005
BstSFI CTRYAG 4 cut(s) 104, 777, 1414, 1644
BstUI CGCG 2 cut(s) 10, 12
BstV1I GCAGC 7 cut(s) 27, 90, 118, 958, 1224, 1449, 2084
BstV2I GAAGAC 3 cut(s) 128, 1942, 1992
BstX2I RGATCY 1 cut(s) 273
BstYI RGATCY 1 cut(s) 273
BsuI GTATCC 1 cut(s) 1984
BtgI CCRYGG 1 cut(s) 1880
BtgZI GCGATG 1 cut(s) 161
BtrI CACGTC 2 cut(s) 76, 250
BtsIMutI CAGTG 5 cut(s) 522, 675, 786, 1399, 1784
BveI ACCTGC 1 cut(s) 1894
Cac8I GCNNGC 5 cut(s) 10, 21, 25, 70, 653
CaiI CAGNNNCTG 1 cut(s) 788
CfoI GCGC 2 cut(s) 10, 12
Cfr10I RCCGGY 3 cut(s) 48, 651, 658
Cfr13I GGNCC 5 cut(s) 46, 235, 1115, 1594, 1876
Cfr9I CCCGGG 1 cut(s) 2005
CseI GACGC 2 cut(s) 813, 2003
Csp6I GTAC 6 cut(s) 31, 211, 280, 370, 816, 1516
CspAI ACCGGT 2 cut(s) 48, 658
CspCI CAANNNNNGTGG 2 cut(s) 850, 885
CviAII CATG 9 cut(s) 28, 98, 232, 394, 420, 590, 1409, 1881, 1927
CviQI GTAC 6 cut(s) 31, 211, 280, 370, 816, 1516
DdeI CTNAG 8 cut(s) 83, 297, 348, 572, 802, 828, 1027, 1776
DpnI GATC 4 cut(s) 275, 588, 1110, 1354
DpnII GATC 4 cut(s) 273, 586, 1108, 1352
DraI TTTAAA 2 cut(s) 384, 1381
EaeI YGGCCR 3 cut(s) 598, 649, 653
Eam1104I CTCTTC 2 cut(s) 360, 1039
EarI CTCTTC 2 cut(s) 360, 1039
EciI GGCGGA 1 cut(s) 253
Ecl136II GAGCTC 1 cut(s) 352
Eco130I CCWWGG 4 cut(s) 331, 582, 1523, 1880
Eco147I AGGCCT 1 cut(s) 1956
Eco24I GRGCYC 1 cut(s) 354
Eco47I GGWCC 2 cut(s) 46, 1876
Eco53kI GAGCTC 1 cut(s) 352
Eco57I CTGAAG 5 cut(s) 384, 1125, 1140, 1812, 2061
Eco88I CYCGRG 1 cut(s) 2005
EcoICRI GAGCTC 1 cut(s) 352
EcoNI CCTNNNNNAGG 1 cut(s) 1036
EcoO109I RGGNCCY 1 cut(s) 1115
EcoRII CCWGG 1 cut(s) 646
EcoT14I CCWWGG 4 cut(s) 331, 582, 1523, 1880
EcoT38I GRGCYC 1 cut(s) 354
ErhI CCWWGG 4 cut(s) 331, 582, 1523, 1880
FaeI CATG 9 cut(s) 31, 101, 235, 397, 423, 593, 1412, 1884, 1930
FalI AAGNNNNNCTT 2 cut(s) 1361, 1393
FaqI GGGAC 2 cut(s) 1862, 2022
FatI CATG 9 cut(s) 27, 97, 231, 393, 419, 589, 1408, 1880, 1926
FriOI GRGCYC 1 cut(s) 354
FseI GGCCGGCC 1 cut(s) 655
FspBI CTAG 6 cut(s) 821, 960, 1191, 1499, 1524, 1940
GlaI GCGC 2 cut(s) 9, 11
HapII CCGG 9 cut(s) 49, 184, 201, 214, 267, 652, 659, 1112, 2006
HgaI GACGC 2 cut(s) 813, 2003
HhaI GCGC 2 cut(s) 10, 12
Hin1I GRCGYC 1 cut(s) 155
Hin1II CATG 9 cut(s) 31, 101, 235, 397, 423, 593, 1412, 1884, 1930
Hin6I GCGC 2 cut(s) 8, 10
HinP1I GCGC 2 cut(s) 8, 10
HincII GTYRAC 2 cut(s) 757, 1181
HindII GTYRAC 2 cut(s) 757, 1181
HpaI GTTAAC 1 cut(s) 757
HpaII CCGG 9 cut(s) 49, 184, 201, 214, 267, 652, 659, 1112, 2006
HphI GGTGA 2 cut(s) 487, 515
Hpy166II GTNNAC 6 cut(s) 247, 757, 818, 1181, 1375, 1651
Hpy188III TCNNGA 5 cut(s) 453, 720, 1345, 1747, 1964
Hpy8I GTNNAC 6 cut(s) 247, 757, 818, 1181, 1375, 1651
Hpy99I CGWCG 1 cut(s) 1584
HpyAV CCTTC 5 cut(s) 310, 1753, 1821, 1946, 2041
HpyCH4III ACNGT 6 cut(s) 179, 526, 1394, 1699, 1870, 1991
HpyCH4IV ACGT 6 cut(s) 75, 155, 249, 1495, 1582, 2052
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 1212
HpyF3I CTNAG 8 cut(s) 83, 297, 348, 572, 802, 828, 1027, 1776
HpySE526I ACGT 6 cut(s) 75, 155, 249, 1495, 1582, 2052
Hsp92I GRCGYC 1 cut(s) 155
Hsp92II CATG 9 cut(s) 31, 101, 235, 397, 423, 593, 1412, 1884, 1930
HspAI GCGC 2 cut(s) 8, 10
KroI GCCGGC 1 cut(s) 651
KroNI GCCGGC 1 cut(s) 653
KspAI GTTAAC 1 cut(s) 757
Kzo9I GATC 4 cut(s) 273, 586, 1108, 1352
LmnI GCTCC 4 cut(s) 216, 357, 857, 1475
Lsp1109I GCAGC 7 cut(s) 27, 90, 118, 958, 1224, 1449, 2084
MaeI CTAG 6 cut(s) 821, 960, 1191, 1499, 1524, 1940
MaeII ACGT 6 cut(s) 75, 155, 249, 1495, 1582, 2052
MaeIII GTNAC 4 cut(s) 475, 937, 1507, 2000
MalI GATC 4 cut(s) 275, 588, 1110, 1354
MboI GATC 4 cut(s) 273, 586, 1108, 1352
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 2 cut(s) 354, 1208
MlsI TGGCCA 1 cut(s) 600
MluCI AATT 8 cut(s) 638, 952, 964, 1091, 1246, 1305, 1618, 2104
MluNI TGGCCA 1 cut(s) 600
MlyI GAGTC 3 cut(s) 8, 75, 214
MmeI TCCRAC 2 cut(s) 1687, 1891
Mox20I TGGCCA 1 cut(s) 600
MroNI GCCGGC 1 cut(s) 651
MscI TGGCCA 1 cut(s) 600
MslI CAYNNNNRTG 3 cut(s) 594, 1455, 1777
Msp20I TGGCCA 1 cut(s) 600
MspI CCGG 9 cut(s) 49, 184, 201, 214, 267, 652, 659, 1112, 2006
MspR9I CCNGG 6 cut(s) 185, 202, 648, 1113, 2006, 2007
Mva1269I GAATGC 2 cut(s) 1130, 1141
MvaI CCWGG 1 cut(s) 648
MvnI CGCG 2 cut(s) 10, 12
MwoI GCNNNNNNNGC 2 cut(s) 16, 1212
NaeI GCCGGC 1 cut(s) 653
NciI CCSGG 5 cut(s) 185, 202, 1113, 2006, 2007
NcoI CCATGG 1 cut(s) 1880
NdeII GATC 4 cut(s) 273, 586, 1108, 1352
NgoMIV GCCGGC 1 cut(s) 651
NlaIII CATG 9 cut(s) 31, 101, 235, 397, 423, 593, 1412, 1884, 1930
NlaIV GGNNCC 7 cut(s) 53, 171, 859, 1116, 1318, 1788, 1878
NmeAIII GCCGAG 1 cut(s) 115
NmuCI GTSAC 4 cut(s) 475, 937, 1507, 2000
NspI RCATGY 1 cut(s) 31
OliI CACNNNNGTG 1 cut(s) 1777
PauI GCGCGC 1 cut(s) 8
PceI AGGCCT 1 cut(s) 1956
PcsI WCGNNNNNNNCGW 2 cut(s) 123, 246
PctI GAATGC 2 cut(s) 1130, 1141
PdiI GCCGGC 1 cut(s) 653
PfeI GAWTC 7 cut(s) 286, 301, 390, 997, 1273, 1341, 2035
PflFI GACNNNGTC 1 cut(s) 2013
PflMI CCANNNNNTGG 1 cut(s) 61
PfoI TCCNGGA 1 cut(s) 200
PinAI ACCGGT 2 cut(s) 48, 658
PleI GAGTC 3 cut(s) 8, 75, 213
PpsI GAGTC 3 cut(s) 8, 75, 213
PshAI GACNNNNGTC 1 cut(s) 1716
PshBI ATTAAT 1 cut(s) 1245
Psp124BI GAGCTC 1 cut(s) 354
Psp6I CCWGG 1 cut(s) 646
PspGI CCWGG 1 cut(s) 646
PspN4I GGNNCC 7 cut(s) 53, 171, 859, 1116, 1318, 1788, 1878
PspPI GGNCC 5 cut(s) 46, 235, 1115, 1594, 1876
PstI CTGCAG 1 cut(s) 108
PstNI CAGNNNCTG 1 cut(s) 788
PsuI RGATCY 1 cut(s) 273
PsyI GACNNNGTC 1 cut(s) 2013
PteI GCGCGC 1 cut(s) 8
RigI GGCCGGCC 1 cut(s) 655
RsaI GTAC 6 cut(s) 32, 212, 281, 371, 817, 1517
RsaNI GTAC 6 cut(s) 31, 211, 280, 370, 816, 1516
RseI CAYNNNNRTG 3 cut(s) 594, 1455, 1777
SacI GAGCTC 1 cut(s) 354
Sau3AI GATC 4 cut(s) 273, 586, 1108, 1352
Sau96I GGNCC 5 cut(s) 46, 235, 1115, 1594, 1876
ScaI AGTACT 2 cut(s) 281, 371
SchI GAGTC 3 cut(s) 8, 75, 214
ScrFI CCNGG 6 cut(s) 185, 202, 648, 1113, 2006, 2007
SduI GDGCHC 2 cut(s) 354, 1208
SfcI CTRYAG 4 cut(s) 104, 777, 1414, 1644
SinI GGWCC 2 cut(s) 46, 1876
SmaI CCCGGG 1 cut(s) 2007
SmiMI CAYNNNNRTG 3 cut(s) 594, 1455, 1777
Sse9I AATT 8 cut(s) 638, 952, 964, 1091, 1246, 1305, 1618, 2104
SseBI AGGCCT 1 cut(s) 1956
SsiI CCGC 6 cut(s) 5, 173, 264, 293, 539, 1447
SspI AATATT 1 cut(s) 409
SspMI CTAG 6 cut(s) 821, 960, 1191, 1499, 1524, 1940
SstI GAGCTC 1 cut(s) 354
StuI AGGCCT 1 cut(s) 1956
StyD4I CCNGG 6 cut(s) 183, 200, 646, 1111, 2004, 2005
StyI CCWWGG 4 cut(s) 331, 582, 1523, 1880
TaaI ACNGT 6 cut(s) 179, 526, 1394, 1699, 1870, 1991
TaiI ACGT 6 cut(s) 78, 158, 252, 1498, 1585, 2055
TaqI TCGA 1 cut(s) 1724
TaqII GACCGA 2 cut(s) 140, 1864
TasI AATT 8 cut(s) 638, 952, 964, 1091, 1246, 1305, 1618, 2104
TatI WGTACW 2 cut(s) 279, 369
TauI GCSGC 4 cut(s) 8, 296, 542, 1450
TfiI GAWTC 7 cut(s) 286, 301, 390, 997, 1273, 1341, 2035
TscAI CASTG 5 cut(s) 529, 675, 793, 1399, 1784
TseFI GTSAC 4 cut(s) 475, 937, 1507, 2000
TseI GCWGC 7 cut(s) 40, 103, 106, 946, 1212, 1462, 2072
Tsp45I GTSAC 4 cut(s) 475, 937, 1507, 2000
TspGWI ACGGA 1 cut(s) 198
TspMI CCCGGG 1 cut(s) 2005
TspRI CASTG 5 cut(s) 529, 675, 793, 1399, 1784
Tth111I GACNNNGTC 1 cut(s) 2013
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 2 cut(s) 46, 1876
VspI ATTAAT 1 cut(s) 1245
XagI CCTNNNNNAGG 1 cut(s) 1036
XapI RAATTY 1 cut(s) 964
XceI RCATGY 1 cut(s) 31
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XmaI CCCGGG 1 cut(s) 2005
XmaJI CCTAGG 1 cut(s) 1523
XspI CTAG 6 cut(s) 821, 960, 1191, 1499, 1524, 1940
ZraI GACGTC 1 cut(s) 156
ZrmI AGTACT 2 cut(s) 281, 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.