AT4G24740

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
12754489 .. 12757866
3378 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G24740.10

Sequence Viewer

Length: 1284 bp
ATGGAGATGGAGCGTGTGCATGAATTCCCTCATACTCACATGGATCGTCGTCCCAGAAAGAGAGCGCGTCTCGGTTGGGATGTGTTGCCTCAGGCAACCAAGGCTCAGGTAGGAATGTTTTGTGGGCAAGAGATTGGAAATATATCAAGCTTTGCATCTTCCGGAGCTCCTTCAGACAATAGTAGCTCTCTTTGTGTTAAGGGTGTGGCTCGAAATGGTTCTCCCCCATGGCGAGAAGATGATAAGGATGGACATTACATATTTGAACTGGGAGATGACTTAACTCCACGCTATAAAATTTATAGCAAAATGGGGGAAGGTACTTTTGGTCAAGTGCTAGAATGTTGGGATAGGGAGAGGAAGGAAATGGTGGCAGTAAAAATTGTCCGTGGTGTGAAGAAATACCGTGAGGCTGCTATGATTGAAATTGAAATGCTGCAACAGCTTGGTAAACATGACAAAGGTGGCAATCGTTGTGTACAAATTCGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTATTTGAGAAGCTTGGATCGAGTTTATACGATTTTCTTCGGAAAAACAATTATCGCTCCTTTCCCATTGATCTTGTCCGTGAGATTGGCTGGCAACTCTTGGAATGTGTAGCATTTATGCATGACTTGCGCATGATTCATACGGACCTTAAACCAGAAAATATTCTGTTAGTCTCCTCAGACTATGTGAAGATTCCCGAGTACAAGGGGTCCCGATTACAAAGGGATGTATGCTATAAAAGAGTGCCTAAATCAAGTGCAATAAAGGTGATTGATTTTGGTAGCACAACTTATGAGCGCCAGGACCAAACCTACATTGTATCAACCAGACATTATAGGGCACCAGAAGTCATTTTAGGTCTTGGCTGGAGTTATCCGTGTGATGTTTGGAGCGTTGGATGTATCATAGTGGAGTTGTGCACGGGTGAAGCATTGTTCCAAACACATGAAAACCTGGAGCATCTAGCGATGATGGAGCGTGTTCTTGGGCCGTTTCCTCAACAAATGCTGAAGAAAGTGGACCGGCACTCAGAGAAATATGTGAGAAGAGGTCGTTTGGATTGGCCAGATGGGGCAACCTCAAGAGATAGCCTGAAGGCAGTATTGAAGCTTCCTCGGCTTCAGAATTTAATAATGCAACATGTGGACCACTCAGCCGGGGAGTTAATAAATATGGTGCAAGGACTTCTGCGATTTGATCCGTCAGAGAGAATAACCGCTCGTGAAGCTCTGAGGCATCCGTTTTTCGCAAGGAGAAGATAG

Protein Analysis

427

Amino Acids

49.57

Weight (kDa)

9.03

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 8 - 217 1.7e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 8 - 128 7.1e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 653
AccB1I GGYRCC 1 cut(s) 862
AccBSI CCGCTC 1 cut(s) 1241
AccII CGCG 1 cut(s) 67
AccIII TCCGGA 1 cut(s) 161
AciI CCGC 1 cut(s) 1239
AclWI GGATC 3 cut(s) 51, 547, 1214
AcoI YGGCCR 1 cut(s) 1085
AcsI RAATTY 4 cut(s) 23, 297, 483, 1147
AcuI CTGAAG 4 cut(s) 156, 1052, 1127, 1136
AfaI GTAC 3 cut(s) 322, 480, 725
AflIII ACRYGT 1 cut(s) 1162
AgsI TTSAA 4 cut(s) 266, 425, 431, 1129
AjnI CCWGG 2 cut(s) 822, 975
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
AluBI AGCT 7 cut(s) 150, 167, 186, 445, 535, 1132, 1250
AluI AGCT 7 cut(s) 150, 167, 186, 445, 535, 1132, 1250
Alw21I GWGCWC 2 cut(s) 169, 944
Alw26I GTCTC 2 cut(s) 74, 700
Alw44I GTGCAC 1 cut(s) 940
AlwI GGATC 3 cut(s) 51, 547, 1214
Ama87I CYCGRG 1 cut(s) 719
Aor13HI TCCGGA 1 cut(s) 161
AoxI GGCC 2 cut(s) 1010, 1085
ApaLI GTGCAC 1 cut(s) 940
ApeKI GCWGC 2 cut(s) 413, 436
ApoI RAATTY 4 cut(s) 23, 297, 483, 1147
Asp700I GAANNNNTTC 2 cut(s) 217, 684
AspLEI GCGC 3 cut(s) 67, 654, 822
AspS9I GGNCC 6 cut(s) 667, 732, 826, 1010, 1042, 1168
AsuC2I CCSGG 1 cut(s) 1180
AsuHPI GGTGA 2 cut(s) 802, 959
AvaI CYCGRG 1 cut(s) 719
AvaII GGWCC 5 cut(s) 667, 732, 826, 1042, 1168
AxyI CCTNAGG 1 cut(s) 90
BaeGI GKGCMC 2 cut(s) 865, 944
BalI TGGCCA 1 cut(s) 1087
BanI GGYRCC 1 cut(s) 862
BanII GRGCYC 1 cut(s) 169
BarI GAAGNNNNNNTAC 2 cut(s) 1116, 1148
BauI CACGAG 1 cut(s) 1242
Bbv12I GWGCWC 2 cut(s) 169, 944
BbvI GCAGC 2 cut(s) 400, 423
BccI CCATC 3 cut(s) 242, 988, 1085
BceAI ACGGC 1 cut(s) 997
BciT130I CCWGG 2 cut(s) 824, 977
BcnI CCSGG 1 cut(s) 1180
BcoDI GTCTC 2 cut(s) 74, 700
BfaI CTAG 2 cut(s) 338, 986
BfoI RGCGCY 1 cut(s) 823
BisI GCNGC 2 cut(s) 414, 437
BlsI GCNGC 2 cut(s) 415, 438
Bme1390I CCNGG 3 cut(s) 824, 977, 1180
Bme18I GGWCC 5 cut(s) 667, 732, 826, 1042, 1168
BmeT110I CYCGRG 1 cut(s) 719
BmgT120I GGNCC 6 cut(s) 667, 732, 826, 1010, 1042, 1168
BmiI GGNNCC 3 cut(s) 733, 734, 864
BmrFI CCNGG 3 cut(s) 824, 977, 1180
BmrI ACTGGG 1 cut(s) 278
BmsI GCATC 3 cut(s) 164, 991, 1267
BmuI ACTGGG 1 cut(s) 278
BplI GAGNNNNNCTC 2 cut(s) 54, 86
BpmI CTGGAG 2 cut(s) 910, 998
Bpu10I CCTNAGC 1 cut(s) 105
BpuEI CTTGAG 1 cut(s) 1087
BpuMI CCSGG 1 cut(s) 1180
BsaJI CCNNGG 5 cut(s) 99, 227, 388, 1136, 1179
BsaWI WCCGGW 1 cut(s) 161
Bse118I RCCGGY 1 cut(s) 1044
Bse1I ACTGG 2 cut(s) 273, 497
Bse21I CCTNAGG 1 cut(s) 90
BseAI TCCGGA 1 cut(s) 161
BseBI CCWGG 2 cut(s) 824, 977
BseDI CCNNGG 5 cut(s) 99, 227, 388, 1136, 1179
BseGI GGATG 5 cut(s) 85, 253, 754, 926, 1258
BseMII CTCAG 6 cut(s) 104, 119, 714, 1065, 1188, 1244
BseNI ACTGG 2 cut(s) 273, 497
BseRI GAGGAG 1 cut(s) 688
BseSI GKGCMC 2 cut(s) 865, 944
BseXI GCAGC 2 cut(s) 400, 423
Bsh1236I CGCG 1 cut(s) 67
BshFI GGCC 2 cut(s) 1012, 1087
BshNI GGYRCC 1 cut(s) 862
BsiHKAI GWGCWC 2 cut(s) 169, 944
BsiHKCI CYCGRG 1 cut(s) 719
BsiSI CCGG 3 cut(s) 162, 1045, 1179
BslFI GGGAC 2 cut(s) 36, 718
BsmAI GTCTC 2 cut(s) 74, 700
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 2 cut(s) 36, 718
BsnI GGCC 2 cut(s) 1012, 1087
BsoBI CYCGRG 1 cut(s) 719
Bsp1286I GDGCHC 3 cut(s) 169, 865, 944
Bsp13I TCCGGA 1 cut(s) 161
Bsp1407I TGTACA 1 cut(s) 478
Bsp143I GATC 4 cut(s) 43, 539, 592, 1219
Bsp19I CCATGG 1 cut(s) 227
BspACI CCGC 1 cut(s) 1239
BspANI GGCC 2 cut(s) 1012, 1087
BspCNI CTCAG 6 cut(s) 103, 118, 713, 1064, 1187, 1245
BspEI TCCGGA 1 cut(s) 161
BspFNI CGCG 1 cut(s) 67
BspLI GGNNCC 3 cut(s) 733, 734, 864
BspPI GGATC 3 cut(s) 51, 547, 1214
BspT107I GGYRCC 1 cut(s) 862
BsrBI CCGCTC 1 cut(s) 1241
BsrFI RCCGGY 1 cut(s) 1044
BsrGI TGTACA 1 cut(s) 478
BsrI ACTGG 2 cut(s) 273, 497
BssAI RCCGGY 1 cut(s) 1044
BssECI CCNNGG 5 cut(s) 99, 227, 388, 1136, 1179
BssMI GATC 4 cut(s) 43, 539, 592, 1219
BssSI CACGAG 1 cut(s) 1242
BssT1I CCWWGG 2 cut(s) 99, 227
Bst2BI CACGAG 1 cut(s) 1242
Bst2UI CCWGG 2 cut(s) 824, 977
Bst4CI ACNGT 1 cut(s) 407
Bst6I CTCTTC 1 cut(s) 1063
BstAPI GCANNNNNTGC 1 cut(s) 649
BstAUI TGTACA 1 cut(s) 478
BstC8I GCNNGC 1 cut(s) 614
BstDEI CTNAG 6 cut(s) 90, 105, 700, 1051, 1174, 1253
BstDSI CCRYGG 2 cut(s) 227, 388
BstF5I GGATG 5 cut(s) 85, 253, 754, 926, 1258
BstFNI CGCG 1 cut(s) 67
BstH2I RGCGCY 1 cut(s) 823
BstHHI GCGC 3 cut(s) 67, 654, 822
BstKTI GATC 4 cut(s) 46, 542, 595, 1222
BstMAI GTCTC 2 cut(s) 74, 700
BstMBI GATC 4 cut(s) 43, 539, 592, 1219
BstMWI GCNNNNNNNGC 5 cut(s) 101, 442, 649, 1138, 1247
BstNI CCWGG 2 cut(s) 824, 977
BstNSI RCATGY 1 cut(s) 1166
BstSCI CCNGG 3 cut(s) 822, 975, 1178
BstSLI GKGCMC 2 cut(s) 865, 944
BstUI CGCG 1 cut(s) 67
BstV1I GCAGC 2 cut(s) 400, 423
Bsu36I CCTNAGG 1 cut(s) 90
BsuRI GGCC 2 cut(s) 1012, 1087
BtgI CCRYGG 2 cut(s) 227, 388
BtgZI GCGATG 1 cut(s) 1004
BtsCI GGATG 5 cut(s) 85, 253, 754, 926, 1258
Cac8I GCNNGC 1 cut(s) 614
CfoI GCGC 3 cut(s) 67, 654, 822
Cfr10I RCCGGY 1 cut(s) 1044
Cfr13I GGNCC 6 cut(s) 667, 732, 826, 1010, 1042, 1168
CseI GACGC 1 cut(s) 56
Csp6I GTAC 3 cut(s) 321, 479, 724
CviAII CATG 8 cut(s) 20, 40, 228, 455, 644, 655, 968, 1163
CviQI GTAC 3 cut(s) 321, 479, 724
DdeI CTNAG 6 cut(s) 90, 105, 700, 1051, 1174, 1253
DpnI GATC 4 cut(s) 45, 541, 594, 1221
DpnII GATC 4 cut(s) 43, 539, 592, 1219
EaeI YGGCCR 1 cut(s) 1085
Eam1104I CTCTTC 1 cut(s) 1063
EarI CTCTTC 1 cut(s) 1063
Ecl136II GAGCTC 1 cut(s) 167
Eco130I CCWWGG 2 cut(s) 99, 227
Eco24I GRGCYC 1 cut(s) 169
Eco47I GGWCC 5 cut(s) 667, 732, 826, 1042, 1168
Eco53kI GAGCTC 1 cut(s) 167
Eco57I CTGAAG 4 cut(s) 156, 1052, 1127, 1136
Eco81I CCTNAGG 1 cut(s) 90
Eco88I CYCGRG 1 cut(s) 719
EcoICRI GAGCTC 1 cut(s) 167
EcoO109I RGGNCCY 1 cut(s) 732
EcoRI GAATTC 1 cut(s) 23
EcoRII CCWGG 2 cut(s) 822, 975
EcoT14I CCWWGG 2 cut(s) 99, 227
EcoT22I ATGCAT 1 cut(s) 645
EcoT38I GRGCYC 1 cut(s) 169
ErhI CCWWGG 2 cut(s) 99, 227
Esp3I CGTCTC 1 cut(s) 74
FaeI CATG 8 cut(s) 23, 43, 231, 458, 647, 658, 971, 1166
FaqI GGGAC 2 cut(s) 36, 718
FatI CATG 8 cut(s) 19, 39, 227, 454, 643, 654, 967, 1162
Fnu4HI GCNGC 2 cut(s) 414, 437
FokI GGATG 5 cut(s) 92, 260, 761, 933, 1245
FriOI GRGCYC 1 cut(s) 169
Fsp4HI GCNGC 2 cut(s) 414, 437
FspBI CTAG 2 cut(s) 338, 986
FspI TGCGCA 1 cut(s) 653
GlaI GCGC 3 cut(s) 66, 653, 821
GluI GCNGC 2 cut(s) 414, 437
GsuI CTGGAG 2 cut(s) 910, 998
HaeII RGCGCY 1 cut(s) 823
HaeIII GGCC 2 cut(s) 1012, 1087
HapII CCGG 3 cut(s) 162, 1045, 1179
HgaI GACGC 1 cut(s) 56
HhaI GCGC 3 cut(s) 67, 654, 822
Hin1II CATG 8 cut(s) 23, 43, 231, 458, 647, 658, 971, 1166
Hin6I GCGC 3 cut(s) 65, 652, 820
HinP1I GCGC 3 cut(s) 65, 652, 820
HindIII AAGCTT 3 cut(s) 148, 533, 1130
HinfI GANTC 2 cut(s) 658, 715
HpaII CCGG 3 cut(s) 162, 1045, 1179
HphI GGTGA 2 cut(s) 802, 959
Hpy166II GTNNAC 5 cut(s) 452, 479, 942, 1042, 1168
Hpy188I TCNGA 8 cut(s) 175, 489, 564, 703, 1054, 1146, 1228, 1254
Hpy188III TCNNGA 5 cut(s) 162, 719, 735, 1104, 1244
Hpy8I GTNNAC 5 cut(s) 452, 479, 942, 1042, 1168
Hpy99I CGWCG 1 cut(s) 51
HpyAV CCTTC 4 cut(s) 180, 311, 355, 1111
HpyCH4III ACNGT 1 cut(s) 407
HpyCH4V TGCA 8 cut(s) 19, 155, 439, 643, 782, 942, 1159, 1201
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 442, 649, 1138, 1247
HpyF3I CTNAG 6 cut(s) 90, 105, 700, 1051, 1174, 1253
Hsp92II CATG 8 cut(s) 23, 43, 231, 458, 647, 658, 971, 1166
HspAI GCGC 3 cut(s) 65, 652, 820
KflI GGGWCCC 1 cut(s) 732
Kpn2I TCCGGA 1 cut(s) 161
Kzo9I GATC 4 cut(s) 43, 539, 592, 1219
LmnI GCTCC 7 cut(s) 10, 164, 172, 584, 912, 979, 997
Lsp1109I GCAGC 2 cut(s) 400, 423
LweI GCATC 3 cut(s) 164, 991, 1267
MaeI CTAG 2 cut(s) 338, 986
MaeIII GTNAC 1 cut(s) 506
MalI GATC 4 cut(s) 45, 541, 594, 1221
MbiI CCGCTC 1 cut(s) 1241
MboI GATC 4 cut(s) 43, 539, 592, 1219
MboII GAAGA 7 cut(s) 150, 248, 409, 551, 724, 1045, 1080
MhlI GDGCHC 3 cut(s) 169, 865, 944
MlsI TGGCCA 1 cut(s) 1087
MluCI AATT 7 cut(s) 23, 297, 381, 426, 483, 571, 1147
MluNI TGGCCA 1 cut(s) 1087
MmeI TCCRAC 1 cut(s) 898
Mox20I TGGCCA 1 cut(s) 1087
Mph1103I ATGCAT 1 cut(s) 645
MroI TCCGGA 1 cut(s) 161
MroXI GAANNNNTTC 2 cut(s) 217, 684
MscI TGGCCA 1 cut(s) 1087
MseI TTAA 5 cut(s) 198, 281, 672, 1151, 1187
Msp20I TGGCCA 1 cut(s) 1087
MspI CCGG 3 cut(s) 162, 1045, 1179
MspR9I CCNGG 3 cut(s) 824, 977, 1180
MvaI CCWGG 2 cut(s) 824, 977
MvnI CGCG 1 cut(s) 67
MwoI GCNNNNNNNGC 5 cut(s) 101, 442, 649, 1138, 1247
NciI CCSGG 1 cut(s) 1180
NcoI CCATGG 1 cut(s) 227
NdeII GATC 4 cut(s) 43, 539, 592, 1219
NlaIII CATG 8 cut(s) 23, 43, 231, 458, 647, 658, 971, 1166
NlaIV GGNNCC 3 cut(s) 733, 734, 864
NmeAIII GCCGAG 1 cut(s) 1117
NsbI TGCGCA 1 cut(s) 653
NsiI ATGCAT 1 cut(s) 645
NspI RCATGY 1 cut(s) 1166
PciI ACATGT 1 cut(s) 1162
PdmI GAANNNNTTC 2 cut(s) 217, 684
PfeI GAWTC 2 cut(s) 658, 715
PkrI GCNGC 2 cut(s) 415, 438
PpuMI RGGWCCY 1 cut(s) 732
PscI ACATGT 1 cut(s) 1162
Psp124BI GAGCTC 1 cut(s) 169
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 2 cut(s) 822, 975
PspGI CCWGG 2 cut(s) 822, 975
PspN4I GGNNCC 3 cut(s) 733, 734, 864
PspPI GGNCC 6 cut(s) 667, 732, 826, 1010, 1042, 1168
PspPPI RGGWCCY 1 cut(s) 732
RsaI GTAC 3 cut(s) 322, 480, 725
RsaNI GTAC 3 cut(s) 321, 479, 724
SacI GAGCTC 1 cut(s) 169
SaqAI TTAA 5 cut(s) 198, 281, 672, 1151, 1187
SatI GCNGC 2 cut(s) 414, 437
Sau3AI GATC 4 cut(s) 43, 539, 592, 1219
Sau96I GGNCC 6 cut(s) 667, 732, 826, 1010, 1042, 1168
ScrFI CCNGG 3 cut(s) 824, 977, 1180
SduI GDGCHC 3 cut(s) 169, 865, 944
SfaNI GCATC 3 cut(s) 164, 991, 1267
SinI GGWCC 5 cut(s) 667, 732, 826, 1042, 1168
SmlI CTYRAG 1 cut(s) 1102
SmoI CTYRAG 1 cut(s) 1102
Sse9I AATT 7 cut(s) 23, 297, 381, 426, 483, 571, 1147
SsiI CCGC 1 cut(s) 1239
SspI AATATT 1 cut(s) 685
SspMI CTAG 2 cut(s) 338, 986
SstI GAGCTC 1 cut(s) 169
StyD4I CCNGG 3 cut(s) 822, 975, 1178
StyI CCWWGG 2 cut(s) 99, 227
TaaI ACNGT 1 cut(s) 407
TaqI TCGA 2 cut(s) 211, 542
TasI AATT 7 cut(s) 23, 297, 381, 426, 483, 571, 1147
TatI WGTACW 2 cut(s) 478, 723
TfiI GAWTC 2 cut(s) 658, 715
Tru1I TTAA 5 cut(s) 198, 281, 672, 1151, 1187
Tru9I TTAA 5 cut(s) 198, 281, 672, 1151, 1187
TseI GCWGC 2 cut(s) 413, 436
TspDTI ATGAA 3 cut(s) 36, 650, 984
TspGWI ACGGA 6 cut(s) 377, 590, 680, 888, 1212, 1251
VneI GTGCAC 1 cut(s) 940
VpaK11BI GGWCC 5 cut(s) 667, 732, 826, 1042, 1168
XapI RAATTY 4 cut(s) 23, 297, 483, 1147
XceI RCATGY 1 cut(s) 1166
XmnI GAANNNNTTC 2 cut(s) 217, 684
XspI CTAG 2 cut(s) 338, 986
Zsp2I ATGCAT 1 cut(s) 645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.