RchiOBHm_Chr7g0192261

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
10787729 .. 10790996
3268 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17183

Sequence Viewer

Length: 1302 bp
ATGGAGATGGAGCGCGTGGTGGAGTTTCCTCACACTCACATGGATCGTCGTCCCCGAAAGAGAGCGCGTCTGGGCTGGGACGTTCCTCAGGCCCCAAAGGCTCAGGTAGGAATGTTTTGTGGACAAGAGGTTGGGAATATGACAAGCTTTGCTCCTTTGATGGCACCCTCACTCTACACTACTAGTTCCCTATTTGATAAGGAAGTAGCTCGAAATGGTTCACCCCCATGGAGAGAAGATGACAAAGATGGGCATTACATGTTTTCGCTGGGAGAAAATTTAACAGCTCGCTACAAAATCCAAAGCAAAATGGGTGAAGGTACATTTGGTCAGGTTTTGGAGTGCTGGGACAGAGAAAAAAAGGAAATGGTTGCCATAAAAATTGTTCGTGGGATCAAGAAATATCGTGAAGCAGCTATGATTGAAATTGAAATGCTGCAACAACTTGGTAAACATGATAAAGGTGGCAGCCGTTGTGTGCAATTACGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTGTTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCAAGAAAAACAATTACCGCTCATTTCCCATTGATCTCGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCATTCATGCATGATCTCTCTCTTATTCATACCGACTTGAAGCCAGAGAACATACTTCTTGTTTCTCAGGATTACGTTAGAGTCCCGGATTATAATAAGAGCTCATCTCGATCACCCAAAGATAGCTCTTACTATAAAAGAGTACCAAAGTCGAGTGCTATTAAGGTGATTGATTTTGGTAGCACAACTTATGAGCGTCAAGATCAGAACTATATTGTATCAACCCGTCATTACCGTGCACCAGAGGTTATTCTTGGAATGGGCTGGAGCTACCCTTGCGATGTATGGAGCATTGGTTGTATCTTAGTGGAGTTGTGCACGGGTGAGGCTTTGTTTCAGACTCATGAGAACTTGGAACACCTTGCCATGATGGAGCGGGTACTTGGTCCCCTGCCCCAGCATATATTAAAGAGAGCAGACCGACATGCTGACAAGTACGTCAGGAGAGGTAGATTGGATTGGCCAGAAGGTGCTGCCTCAAGAGAGAGTATCAAGGCTGTTCAGAAGCTTGCTCGTCTTCAGAATCTTATAATGCAGCACGTAGACCATTCAGCTGGTGACCTTATCCACCTCTTGCAGGGGCTGCTGAAGTATGATCCTTCAGATAGACTTACAGCTCGTGAAGCCCTTAGGCATTCGTTTTTTACACGGGACAATCTTAGGAGATGA

Protein Analysis

433

Amino Acids

50.22

Weight (kDa)

9.07

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 426 2.5e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 99 - 336 3.1e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 726, 1163
AasI GACNNNNNNGTC 1 cut(s) 1070
AccB1I GGYRCC 1 cut(s) 163
AccBSI CCGCTC 2 cut(s) 579, 1009
AccI GTMKAC 1 cut(s) 1176
AccII CGCG 2 cut(s) 15, 67
AciI CCGC 2 cut(s) 577, 1009
AclWI GGATC 3 cut(s) 51, 401, 1223
AcoI YGGCCR 1 cut(s) 1094
AcsI RAATTY 1 cut(s) 277
AcuI CTGAAG 3 cut(s) 1136, 1218, 1241
AfaI GTAC 4 cut(s) 322, 777, 1014, 1070
AfiI CCNNNNNNNGG 1 cut(s) 1210
AflIII ACRYGT 1 cut(s) 258
AgsI TTSAA 3 cut(s) 425, 431, 673
AhlI ACTAGT 1 cut(s) 182
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
Alw21I GWGCWC 3 cut(s) 737, 874, 953
Alw44I GTGCAC 2 cut(s) 870, 949
AlwI GGATC 3 cut(s) 51, 401, 1223
AlwNI CAGNNNCTG 1 cut(s) 1216
AoxI GGCC 2 cut(s) 90, 1094
ApaLI GTGCAC 2 cut(s) 870, 949
ApeKI GCWGC 6 cut(s) 413, 436, 468, 1106, 1168, 1216
ApoI RAATTY 1 cut(s) 277
Asp700I GAANNNNTTC 1 cut(s) 217
AspLEI GCGC 2 cut(s) 15, 67
AspS9I GGNCC 3 cut(s) 91, 539, 1019
AsuC2I CCSGG 1 cut(s) 719
AsuHPI GGTGA 6 cut(s) 213, 326, 738, 811, 968, 1202
AvaII GGWCC 2 cut(s) 539, 1019
AxyI CCTNAGG 2 cut(s) 87, 1262
BaeGI GKGCMC 2 cut(s) 874, 953
BalI TGGCCA 1 cut(s) 1096
BanI GGYRCC 1 cut(s) 163
BanII GRGCYC 1 cut(s) 737
BauI CACGAG 1 cut(s) 1251
BbsI GAAGAC 1 cut(s) 1142
Bbv12I GWGCWC 3 cut(s) 737, 874, 953
BbvI GCAGC 6 cut(s) 423, 425, 480, 1093, 1180, 1203
BccI CCATC 3 cut(s) 154, 242, 997
BceAI ACGGC 1 cut(s) 456
BcnI CCSGG 1 cut(s) 719
BcuI ACTAGT 1 cut(s) 182
BfaI CTAG 1 cut(s) 183
BglI GCCNNNNNGGC 1 cut(s) 98
BisI GCNGC 6 cut(s) 414, 437, 469, 1107, 1169, 1217
BlsI GCNGC 6 cut(s) 415, 438, 470, 1108, 1170, 1218
Bme1390I CCNGG 1 cut(s) 719
Bme18I GGWCC 2 cut(s) 539, 1019
BmgT120I GGNCC 3 cut(s) 91, 539, 1019
BmiI GGNNCC 3 cut(s) 93, 165, 1021
BmrFI CCNGG 1 cut(s) 719
BpiI GAAGAC 1 cut(s) 1142
BplI GAGNNNNNCTC 2 cut(s) 724, 756
BpmI CTGGAG 1 cut(s) 919
Bpu10I CCTNAGC 1 cut(s) 102
BpuEI CTTGAG 2 cut(s) 545, 1096
BpuMI CCSGG 1 cut(s) 719
BsaAI YACGTR 1 cut(s) 1174
BsaJI CCNNGG 1 cut(s) 227
BsaXI ACNNNNNCTCC 2 cut(s) 913, 943
Bsc4I CCNNNNNNNGG 1 cut(s) 1210
Bse1I ACTGG 1 cut(s) 497
Bse21I CCTNAGG 2 cut(s) 87, 1262
BseDI CCNNGG 1 cut(s) 227
BseLI CCNNNNNNNGG 1 cut(s) 1210
BseMII CTCAG 3 cut(s) 101, 116, 713
BseNI ACTGG 1 cut(s) 497
BseSI GKGCMC 2 cut(s) 874, 953
BseXI GCAGC 6 cut(s) 423, 425, 480, 1093, 1180, 1203
BseYI CCCAGC 4 cut(s) 75, 268, 345, 1029
Bsh1236I CGCG 2 cut(s) 15, 67
BshFI GGCC 2 cut(s) 92, 1096
BshNI GGYRCC 1 cut(s) 163
BsiHKAI GWGCWC 3 cut(s) 737, 874, 953
BsiSI CCGG 1 cut(s) 719
BslFI GGGAC 6 cut(s) 36, 92, 362, 701, 1005, 1298
BslI CCNNNNNNNGG 1 cut(s) 1210
BsmFI GGGAC 6 cut(s) 36, 92, 362, 701, 1005, 1298
BsmI GAATGC 2 cut(s) 635, 1267
BsnI GGCC 2 cut(s) 92, 1096
Bsp1286I GDGCHC 3 cut(s) 737, 874, 953
Bsp143I GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
Bsp19I CCATGG 1 cut(s) 227
BspACI CCGC 2 cut(s) 577, 1009
BspANI GGCC 2 cut(s) 92, 1096
BspCNI CTCAG 3 cut(s) 100, 115, 712
BspFNI CGCG 2 cut(s) 15, 67
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 3 cut(s) 93, 165, 1021
BspPI GGATC 3 cut(s) 51, 401, 1223
BspT107I GGYRCC 1 cut(s) 163
BsrBI CCGCTC 2 cut(s) 579, 1009
BsrI ACTGG 1 cut(s) 497
BssECI CCNNGG 1 cut(s) 227
BssMI GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
BssSI CACGAG 1 cut(s) 1251
BssT1I CCWWGG 1 cut(s) 227
Bst2BI CACGAG 1 cut(s) 1251
Bst4CI ACNGT 2 cut(s) 621, 869
BstAPI GCANNNNNTGC 1 cut(s) 1216
BstBAI YACGTR 1 cut(s) 1174
BstC8I GCNNGC 2 cut(s) 289, 1143
BstDEI CTNAG 6 cut(s) 87, 102, 699, 937, 1262, 1292
BstDSI CCRYGG 1 cut(s) 227
BstEII GGTNACC 1 cut(s) 1190
BstENI CCTNNNNNAGG 1 cut(s) 1208
BstFNI CGCG 2 cut(s) 15, 67
BstHHI GCGC 2 cut(s) 15, 67
BstKTI GATC 7 cut(s) 46, 396, 595, 649, 746, 838, 1231
BstMBI GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
BstMWI GCNNNNNNNGC 4 cut(s) 98, 909, 1216, 1256
BstNSI RCATGY 2 cut(s) 262, 1061
BstPI GGTNACC 1 cut(s) 1190
BstSCI CCNGG 1 cut(s) 717
BstSLI GKGCMC 2 cut(s) 874, 953
BstUI CGCG 2 cut(s) 15, 67
BstV1I GCAGC 6 cut(s) 423, 425, 480, 1093, 1180, 1203
BstV2I GAAGAC 1 cut(s) 1142
BstXI CCANNNNNNTGG 1 cut(s) 1187
Bsu36I CCTNAGG 2 cut(s) 87, 1262
BsuRI GGCC 2 cut(s) 92, 1096
BtgI CCRYGG 1 cut(s) 227
BtgZI GCGATG 1 cut(s) 927
Cac8I GCNNGC 2 cut(s) 289, 1143
CaiI CAGNNNCTG 1 cut(s) 1216
CciI TCATGA 1 cut(s) 976
CfoI GCGC 2 cut(s) 15, 67
Cfr13I GGNCC 3 cut(s) 91, 539, 1019
CseI GACGC 2 cut(s) 56, 818
Csp6I GTAC 4 cut(s) 321, 776, 1013, 1069
CviAII CATG 9 cut(s) 40, 228, 259, 455, 640, 644, 977, 1000, 1058
CviQI GTAC 4 cut(s) 321, 776, 1013, 1069
DdeI CTNAG 6 cut(s) 87, 102, 699, 937, 1262, 1292
DpnI GATC 7 cut(s) 45, 395, 594, 648, 745, 837, 1230
DpnII GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
DrdI GACNNNNNNGTC 1 cut(s) 1070
DseDI GACNNNNNNGTC 1 cut(s) 1070
EaeI YGGCCR 1 cut(s) 1094
Ecl136II GAGCTC 1 cut(s) 735
Eco130I CCWWGG 1 cut(s) 227
Eco24I GRGCYC 1 cut(s) 737
Eco47I GGWCC 2 cut(s) 539, 1019
Eco53kI GAGCTC 1 cut(s) 735
Eco57I CTGAAG 3 cut(s) 1136, 1218, 1241
Eco81I CCTNAGG 2 cut(s) 87, 1262
Eco91I GGTNACC 1 cut(s) 1190
EcoICRI GAGCTC 1 cut(s) 735
EcoNI CCTNNNNNAGG 1 cut(s) 1208
EcoO109I RGGNCCY 1 cut(s) 91
EcoO65I GGTNACC 1 cut(s) 1190
EcoT14I CCWWGG 1 cut(s) 227
EcoT22I ATGCAT 1 cut(s) 645
EcoT38I GRGCYC 1 cut(s) 737
ErhI CCWWGG 1 cut(s) 227
FaeI CATG 9 cut(s) 43, 231, 262, 458, 643, 647, 980, 1003, 1061
FaqI GGGAC 6 cut(s) 36, 92, 362, 701, 1005, 1298
FatI CATG 9 cut(s) 39, 227, 258, 454, 639, 643, 976, 999, 1057
FauI CCCGC 1 cut(s) 1002
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 6 cut(s) 414, 437, 469, 1107, 1169, 1217
FriOI GRGCYC 1 cut(s) 737
Fsp4HI GCNGC 6 cut(s) 414, 437, 469, 1107, 1169, 1217
FspBI CTAG 1 cut(s) 183
GlaI GCGC 2 cut(s) 14, 66
GluI GCNGC 6 cut(s) 414, 437, 469, 1107, 1169, 1217
GsaI CCCAGC 4 cut(s) 79, 272, 349, 1033
GsuI CTGGAG 1 cut(s) 919
HaeIII GGCC 2 cut(s) 92, 1096
HapII CCGG 1 cut(s) 719
HgaI GACGC 2 cut(s) 56, 818
HhaI GCGC 2 cut(s) 15, 67
Hin1II CATG 9 cut(s) 43, 231, 262, 458, 643, 647, 980, 1003, 1061
Hin6I GCGC 2 cut(s) 13, 65
HinP1I GCGC 2 cut(s) 13, 65
HindIII AAGCTT 4 cut(s) 145, 533, 544, 1139
HinfI GANTC 3 cut(s) 714, 973, 1156
HpaII CCGG 1 cut(s) 719
HphI GGTGA 6 cut(s) 213, 326, 738, 811, 968, 1202
Hpy166II GTNNAC 6 cut(s) 122, 221, 452, 872, 951, 1177
Hpy188I TCNGA 5 cut(s) 840, 972, 1137, 1155, 1237
Hpy8I GTNNAC 6 cut(s) 122, 221, 452, 872, 951, 1177
Hpy99I CGWCG 1 cut(s) 51
HpyAV CCTTC 3 cut(s) 311, 1094, 1242
HpyCH4III ACNGT 2 cut(s) 621, 869
HpyCH4IV ACGT 4 cut(s) 81, 708, 1071, 1173
HpyCH4V TGCA 7 cut(s) 439, 481, 643, 872, 951, 1168, 1210
HpyF10VI GCNNNNNNNGC 4 cut(s) 98, 909, 1216, 1256
HpyF3I CTNAG 6 cut(s) 87, 102, 699, 937, 1262, 1292
HpySE526I ACGT 4 cut(s) 81, 708, 1071, 1173
Hsp92II CATG 9 cut(s) 43, 231, 262, 458, 643, 647, 980, 1003, 1061
HspAI GCGC 2 cut(s) 13, 65
Kzo9I GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
LmnI GCTCC 5 cut(s) 10, 157, 900, 921, 1006
Lsp1109I GCAGC 6 cut(s) 423, 425, 480, 1093, 1180, 1203
MaeI CTAG 1 cut(s) 183
MaeII ACGT 4 cut(s) 81, 708, 1071, 1173
MaeIII GTNAC 2 cut(s) 506, 1190
MalI GATC 7 cut(s) 45, 395, 594, 648, 745, 837, 1230
MbiI CCGCTC 2 cut(s) 579, 1009
MboI GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
MboII GAAGA 2 cut(s) 248, 1142
MhlI GDGCHC 3 cut(s) 737, 874, 953
MlsI TGGCCA 1 cut(s) 1096
MluCI AATT 5 cut(s) 277, 381, 426, 482, 571
MluNI TGGCCA 1 cut(s) 1096
MlyI GAGTC 2 cut(s) 723, 967
MmeI TCCRAC 1 cut(s) 603
MnlI CCTC 9 cut(s) 39, 96, 121, 178, 871, 952, 1073, 1120, 1214
Mox20I TGGCCA 1 cut(s) 1096
Mph1103I ATGCAT 1 cut(s) 645
MroXI GAANNNNTTC 1 cut(s) 217
MscI TGGCCA 1 cut(s) 1096
MseI TTAA 3 cut(s) 281, 795, 1040
MslI CAYNNNNRTG 3 cut(s) 38, 226, 867
Msp20I TGGCCA 1 cut(s) 1096
MspA1I CMGCKG 1 cut(s) 1187
MspI CCGG 1 cut(s) 719
MspR9I CCNGG 1 cut(s) 719
Mva1269I GAATGC 2 cut(s) 635, 1267
MvnI CGCG 2 cut(s) 15, 67
MwoI GCNNNNNNNGC 4 cut(s) 98, 909, 1216, 1256
NciI CCSGG 1 cut(s) 719
NcoI CCATGG 1 cut(s) 227
NdeII GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
NlaIII CATG 9 cut(s) 43, 231, 262, 458, 643, 647, 980, 1003, 1061
NlaIV GGNNCC 3 cut(s) 93, 165, 1021
NmuCI GTSAC 1 cut(s) 1190
NsiI ATGCAT 1 cut(s) 645
NspI RCATGY 2 cut(s) 262, 1061
PagI TCATGA 1 cut(s) 976
PciI ACATGT 1 cut(s) 258
PcsI WCGNNNNNNNCGW 1 cut(s) 52
PctI GAATGC 2 cut(s) 635, 1267
PdmI GAANNNNTTC 1 cut(s) 217
PfeI GAWTC 1 cut(s) 1156
PfoI TCCNGGA 1 cut(s) 717
PkrI GCNGC 6 cut(s) 415, 438, 470, 1108, 1170, 1218
PleI GAGTC 2 cut(s) 722, 967
PpsI GAGTC 2 cut(s) 722, 967
Ppu21I YACGTR 1 cut(s) 1174
PscI ACATGT 1 cut(s) 258
PsiI TTATAA 2 cut(s) 726, 1163
Psp124BI GAGCTC 1 cut(s) 737
PspEI GGTNACC 1 cut(s) 1190
PspFI CCCAGC 4 cut(s) 75, 268, 345, 1029
PspN4I GGNNCC 3 cut(s) 93, 165, 1021
PspPI GGNCC 3 cut(s) 91, 539, 1019
PstNI CAGNNNCTG 1 cut(s) 1216
PvuII CAGCTG 1 cut(s) 1187
RsaI GTAC 4 cut(s) 322, 777, 1014, 1070
RsaNI GTAC 4 cut(s) 321, 776, 1013, 1069
RseI CAYNNNNRTG 3 cut(s) 38, 226, 867
SacI GAGCTC 1 cut(s) 737
SaqAI TTAA 3 cut(s) 281, 795, 1040
SatI GCNGC 6 cut(s) 414, 437, 469, 1107, 1169, 1217
Sau3AI GATC 7 cut(s) 43, 393, 592, 646, 743, 835, 1228
Sau96I GGNCC 3 cut(s) 91, 539, 1019
SchI GAGTC 2 cut(s) 723, 967
ScrFI CCNGG 1 cut(s) 719
SduI GDGCHC 3 cut(s) 737, 874, 953
SinI GGWCC 2 cut(s) 539, 1019
SmiMI CAYNNNNRTG 3 cut(s) 38, 226, 867
SmlI CTYRAG 2 cut(s) 560, 1111
SmoI CTYRAG 2 cut(s) 560, 1111
SpeI ACTAGT 1 cut(s) 182
Sse9I AATT 5 cut(s) 277, 381, 426, 482, 571
SsiI CCGC 2 cut(s) 577, 1009
SspMI CTAG 1 cut(s) 183
SstI GAGCTC 1 cut(s) 737
StyD4I CCNGG 1 cut(s) 717
StyI CCWWGG 1 cut(s) 227
TaaI ACNGT 2 cut(s) 621, 869
TaiI ACGT 4 cut(s) 84, 711, 1074, 1176
TaqI TCGA 3 cut(s) 211, 742, 785
TaqII GACCGA 1 cut(s) 1068
TasI AATT 5 cut(s) 277, 381, 426, 482, 571
TfiI GAWTC 1 cut(s) 1156
Tru1I TTAA 3 cut(s) 281, 795, 1040
Tru9I TTAA 3 cut(s) 281, 795, 1040
TseFI GTSAC 1 cut(s) 1190
TseI GCWGC 6 cut(s) 413, 436, 468, 1106, 1168, 1216
Tsp45I GTSAC 1 cut(s) 1190
TspDTI ATGAA 2 cut(s) 628, 650
TspGWI ACGGA 2 cut(s) 502, 590
VneI GTGCAC 2 cut(s) 870, 949
VpaK11BI GGWCC 2 cut(s) 539, 1019
XagI CCTNNNNNAGG 1 cut(s) 1208
XapI RAATTY 1 cut(s) 277
XceI RCATGY 2 cut(s) 262, 1061
XmiI GTMKAC 1 cut(s) 1176
XmnI GAANNNNTTC 1 cut(s) 217
XspI CTAG 1 cut(s) 183
Zsp2I ATGCAT 1 cut(s) 645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.