Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007616

Physical Location & Seq

Genomic Coordinates Forward (+)

14283767 .. 14287511

Gene Structure 3745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G163600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGGAGACTGAGCGCGTGACGGAGTTTCCTTTCACTCACTTGGATCGTCGCCCTCGAAAGAGAGCGCGATTGGGCTGGGATGTTCCTCAGGCCCCAAAGGCTCAGGTAGGAATGTTTTGTGGACAAGAGCTTGGGAATGTGACAAGCTTTGCATCTTTGATGGCACCATCAGACCACACTACTATCTCTCTTTTTGATAAGGAAGTGGCTCGAAATGGTTCCCCCCCATGGAGAGAGGATGACAAAGATGGGCATTACGTGTTTTCGCTCGGAGAAAATTTAACATCTCGCTACAAAATCCAGAGCAAAATGGGTGAAGGTACCTTTGGTCAGGTTTTGGAATGTTGGGACAGAGAAAAAAAGGAAATGGTTGCCATAAAAATTGTTCGGGGGGTCAAGAAATATCGTGAAGCAGCAATGATCGAAATTGAAGTGCTGCAACAGCTTGGTAAACATGACAAAGGTGGCAACCGTTGTGTGCAATTACGGAACTGGTTTGACTATCGTAACCATATTTGTATTGTGTTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCAAGAAAAACAATTACCGCTCATTTCCCATTGACCTTGTCCGTGAGATTGGCCGACAACTGTTGGAATGTGTAGCATTCATGCATGACCTTCGCCTGATTCATACCGACTTGAAGCCAGAGAATATACTCCTTGTTTCTCACGATTACAGTAAAGTTCCTGATTATAATAAGAACTCATCTCGATCACCCAAAGATAGCTCATATTTTAAAAGAATTCCAAAGTCAAGTGCTATTAAGGTTATTGATTTTGGAAGCACAACTTATGAACGTCAAGAACAAAACTATATTGTATCAACGCGACATTACCGAGCTCCAGAGGTTATTCTTGGAATGGGATGGACCTACCCGTGTGATGTATGGAGCATTGGTTGTATCTTAGTGGAGTTATGCACGGGTGAGGCTTTGTTCCAGACTCATGAAAATTTGGAGCATCTTGCCATGATGGAGCGGGTACTTGGGCCTTTGCCCCAGCACATATTGAAGAGAGCAGACCGACATGCTGAGAAGTATGTCAGGAGGGGTAGATTGGATTGGCCAGAGGGTGCAGCCTCGCGAGAGAGTATCAGAGCTGTTCAGAAACTTCCTCGTCTTCAGAATCTTGTAATGCAGCATGTAGACCATTCCGCAGGGGACCTCATTCACCTCTTGCAGGGTCTCCTTAGGTACGACCCATCGGATAGGCTTTCAGCTCGGGAAGCCCTCAGACATTCATTTTTCACGAAGGACAATCTTAGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0006139 GO:0006396 GO:0006397 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0034641 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046483 GO:0046777 GO:0071704 GO:0090304 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

434

Amino Acids

50.25

Weight (kDa)

9.09

Isoelectric Point (pI)

50.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24740 AT4G24740 AT4G24740 AT4G24740 AT4G24740 AT4G24740 AT4G24740 AT4G24740
fragaria_vesca	FvH4_5g06570 FvH4_5g06570 FvH4_5g06570 FvH4_5g06570
malus_domestica	MD06G1164200.v1.1 MD14G1169100.v1.1
prunus_persica	Prupe.5G163600_v2.0.a1 Prupe.5G163600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0192261
rosa_laevigata	RLG00000004381
rosa_multiflora	Rmu_co8508131.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263140
rosa_rugosa	Rorug07G0000300
rosa_samantha	Rh7AG124400 Rh7CG128300
rosa_wichuraiana	Rw7G010660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	726
Acc65I	GGTACC	1 cut(s)	320
AccB1I	GGYRCC	2 cut(s)	163, 320
AccBSI	CCGCTC	2 cut(s)	579, 1009
AccI	GTMKAC	1 cut(s)	1176
AccII	CGCG	4 cut(s)	15, 67, 859, 1114
AciI	CCGC	3 cut(s)	577, 1009, 1185
AclWI	GGATC	1 cut(s)	51
AcoI	YGGCCR	2 cut(s)	610, 1094
AcsI	RAATTY	3 cut(s)	277, 774, 982
AcuI	CTGAAG	1 cut(s)	1136
AfaI	GTAC	3 cut(s)	322, 1014, 1226
AfiI	CCNNNNNNNGG	2 cut(s)	228, 1210
AflIII	ACRYGT	1 cut(s)	258
AgsI	TTSAA	3 cut(s)	431, 673, 1042
AjuI	GAANNNNNNNTTGG	2 cut(s)	309, 341
AluBI	AGCT	9 cut(s)	130, 147, 445, 535, 546, 759, 872, 1130, 1250
AluI	AGCT	9 cut(s)	130, 147, 445, 535, 546, 759, 872, 1130, 1250
Alw21I	GWGCWC	1 cut(s)	874
Alw26I	GTCTC	1 cut(s)	1220
AlwI	GGATC	1 cut(s)	51
Ama87I	CYCGRG	1 cut(s)	1251
AoxI	GGCC	4 cut(s)	90, 610, 1019, 1094
ApeKI	GCWGC	4 cut(s)	413, 436, 1106, 1168
ApoI	RAATTY	3 cut(s)	277, 774, 982
Asp700I	GAANNNNTTC	1 cut(s)	217
Asp718I	GGTACC	1 cut(s)	320
AspLEI	GCGC	2 cut(s)	15, 67
AspS9I	GGNCC	5 cut(s)	91, 539, 900, 1019, 1192
AsuHPI	GGTGA	4 cut(s)	326, 738, 968, 1193
AvaI	CYCGRG	1 cut(s)	1251
AvaII	GGWCC	3 cut(s)	539, 900, 1192
AxyI	CCTNAGG	2 cut(s)	87, 1220
BalI	TGGCCA	1 cut(s)	1096
BanI	GGYRCC	2 cut(s)	163, 320
BanII	GRGCYC	1 cut(s)	874
BbsI	GAAGAC	1 cut(s)	1142
Bbv12I	GWGCWC	1 cut(s)	874
BbvI	GCAGC	4 cut(s)	423, 425, 1118, 1180
BccI	CCATC	6 cut(s)	154, 175, 242, 891, 997, 1240
BcgI	CGANNNNNNTGC	2 cut(s)	632, 666
BcoDI	GTCTC	1 cut(s)	1220
BglI	GCCNNNNNGGC	1 cut(s)	98
BisI	GCNGC	4 cut(s)	414, 437, 1107, 1169
BlsI	GCNGC	4 cut(s)	415, 438, 1108, 1170
Bme18I	GGWCC	3 cut(s)	539, 900, 1192
BmeT110I	CYCGRG	1 cut(s)	1251
BmgT120I	GGNCC	5 cut(s)	91, 539, 900, 1019, 1192
BmiI	GGNNCC	5 cut(s)	93, 165, 220, 322, 1193
BmsI	GCATC	2 cut(s)	161, 1000
BpiI	GAAGAC	1 cut(s)	1142
BpmI	CTGGAG	1 cut(s)	858
Bpu10I	CCTNAGC	1 cut(s)	102
BpuEI	CTTGAG	1 cut(s)	545
BsaAI	YACGTR	1 cut(s)	259
BsaI	GGTCTC	1 cut(s)	1220
BsaJI	CCNNGG	1 cut(s)	227
BsaXI	ACNNNNNCTCC	2 cut(s)	913, 943
Bsc4I	CCNNNNNNNGG	2 cut(s)	228, 1210
Bse1I	ACTGG	1 cut(s)	497
Bse21I	CCTNAGG	2 cut(s)	87, 1220
Bse3DI	GCAATG	1 cut(s)	423
BseDI	CCNNGG	1 cut(s)	227
BseGI	GGATG	3 cut(s)	85, 244, 902
BseLI	CCNNNNNNNGG	2 cut(s)	228, 1210
BseMI	GCAATG	1 cut(s)	423
BseMII	CTCAG	4 cut(s)	101, 116, 1053, 1276
BseNI	ACTGG	1 cut(s)	497
BseXI	GCAGC	4 cut(s)	423, 425, 1118, 1180
BseYI	CCCAGC	2 cut(s)	75, 1029
BsgI	GTGCAG	1 cut(s)	1125
Bsh1236I	CGCG	4 cut(s)	15, 67, 859, 1114
BshFI	GGCC	4 cut(s)	92, 612, 1021, 1096
BshNI	GGYRCC	2 cut(s)	163, 320
BsiHKAI	GWGCWC	1 cut(s)	874
BsiHKCI	CYCGRG	1 cut(s)	1251
BslFI	GGGAC	2 cut(s)	362, 1205
BslI	CCNNNNNNNGG	2 cut(s)	228, 1210
BsmAI	GTCTC	1 cut(s)	1220
BsmFI	GGGAC	2 cut(s)	362, 1205
BsmI	GAATGC	1 cut(s)	635
BsnI	GGCC	4 cut(s)	92, 612, 1021, 1096
Bso31I	GGTCTC	1 cut(s)	1220
BsoBI	CYCGRG	1 cut(s)	1251
Bsp1286I	GDGCHC	1 cut(s)	874
Bsp143I	GATC	3 cut(s)	43, 420, 743
Bsp19I	CCATGG	1 cut(s)	227
Bsp68I	TCGCGA	1 cut(s)	1114
BspACI	CCGC	3 cut(s)	577, 1009, 1185
BspANI	GGCC	4 cut(s)	92, 612, 1021, 1096
BspCNI	CTCAG	4 cut(s)	100, 115, 1054, 1275
BspFNI	CGCG	4 cut(s)	15, 67, 859, 1114
BspHI	TCATGA	1 cut(s)	976
BspLI	GGNNCC	5 cut(s)	93, 165, 220, 322, 1193
BspPI	GGATC	1 cut(s)	51
BspT107I	GGYRCC	2 cut(s)	163, 320
BspTNI	GGTCTC	1 cut(s)	1220
BsrBI	CCGCTC	2 cut(s)	579, 1009
BsrDI	GCAATG	1 cut(s)	423
BsrI	ACTGG	1 cut(s)	497
BssECI	CCNNGG	1 cut(s)	227
BssMI	GATC	3 cut(s)	43, 420, 743
BssT1I	CCWWGG	1 cut(s)	227
Bst4CI	ACNGT	3 cut(s)	473, 621, 710
Bst6I	CTCTTC	1 cut(s)	1037
BstBAI	YACGTR	1 cut(s)	259
BstDEI	CTNAG	8 cut(s)	9, 87, 102, 937, 1062, 1220, 1262, 1292
BstDSI	CCRYGG	1 cut(s)	227
BstENI	CCTNNNNNAGG	1 cut(s)	1208
BstF5I	GGATG	3 cut(s)	85, 244, 902
BstFNI	CGCG	4 cut(s)	15, 67, 859, 1114
BstHHI	GCGC	2 cut(s)	15, 67
BstKTI	GATC	3 cut(s)	46, 423, 746
BstMAI	GTCTC	1 cut(s)	1220
BstMBI	GATC	3 cut(s)	43, 420, 743
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 442, 1256
BstNSI	RCATGY	2 cut(s)	1061, 1175
BstUI	CGCG	4 cut(s)	15, 67, 859, 1114
BstV1I	GCAGC	4 cut(s)	423, 425, 1118, 1180
BstV2I	GAAGAC	1 cut(s)	1142
Bsu36I	CCTNAGG	2 cut(s)	87, 1220
BsuRI	GGCC	4 cut(s)	92, 612, 1021, 1096
BtgI	CCRYGG	1 cut(s)	227
BtsCI	GGATG	3 cut(s)	85, 244, 902
BtuMI	TCGCGA	1 cut(s)	1114
CciI	TCATGA	1 cut(s)	976
CfoI	GCGC	2 cut(s)	15, 67
Cfr13I	GGNCC	5 cut(s)	91, 539, 900, 1019, 1192
Csp6I	GTAC	3 cut(s)	321, 1013, 1225
CviAII	CATG	8 cut(s)	228, 455, 640, 644, 977, 1000, 1058, 1172
CviQI	GTAC	3 cut(s)	321, 1013, 1225
DdeI	CTNAG	8 cut(s)	9, 87, 102, 937, 1062, 1220, 1262, 1292
DpnI	GATC	3 cut(s)	45, 422, 745
DpnII	GATC	3 cut(s)	43, 420, 743
DraI	TTTAAA	1 cut(s)	769
EaeI	YGGCCR	2 cut(s)	610, 1094
Eam1104I	CTCTTC	1 cut(s)	1037
EarI	CTCTTC	1 cut(s)	1037
Ecl136II	GAGCTC	1 cut(s)	872
Eco130I	CCWWGG	1 cut(s)	227
Eco24I	GRGCYC	1 cut(s)	874
Eco31I	GGTCTC	1 cut(s)	1220
Eco47I	GGWCC	3 cut(s)	539, 900, 1192
Eco53kI	GAGCTC	1 cut(s)	872
Eco57I	CTGAAG	1 cut(s)	1136
Eco81I	CCTNAGG	2 cut(s)	87, 1220
Eco88I	CYCGRG	1 cut(s)	1251
EcoICRI	GAGCTC	1 cut(s)	872
EcoNI	CCTNNNNNAGG	1 cut(s)	1208
EcoO109I	RGGNCCY	2 cut(s)	91, 1192
EcoRI	GAATTC	1 cut(s)	774
EcoT14I	CCWWGG	1 cut(s)	227
EcoT22I	ATGCAT	1 cut(s)	645
EcoT38I	GRGCYC	1 cut(s)	874
ErhI	CCWWGG	1 cut(s)	227
FaeI	CATG	8 cut(s)	231, 458, 643, 647, 980, 1003, 1061, 1175
FalI	AAGNNNNNCTT	2 cut(s)	805, 837
FaqI	GGGAC	2 cut(s)	362, 1205
FatI	CATG	8 cut(s)	227, 454, 639, 643, 976, 999, 1057, 1171
FauI	CCCGC	1 cut(s)	1002
FblI	GTMKAC	1 cut(s)	1176
Fnu4HI	GCNGC	4 cut(s)	414, 437, 1107, 1169
FokI	GGATG	3 cut(s)	92, 251, 909
FriOI	GRGCYC	1 cut(s)	874
Fsp4HI	GCNGC	4 cut(s)	414, 437, 1107, 1169
GlaI	GCGC	2 cut(s)	14, 66
GluI	GCNGC	4 cut(s)	414, 437, 1107, 1169
GsaI	CCCAGC	2 cut(s)	79, 1033
GsuI	CTGGAG	1 cut(s)	858
HaeIII	GGCC	4 cut(s)	92, 612, 1021, 1096
HhaI	GCGC	2 cut(s)	15, 67
Hin1II	CATG	8 cut(s)	231, 458, 643, 647, 980, 1003, 1061, 1175
Hin6I	GCGC	2 cut(s)	13, 65
HinP1I	GCGC	2 cut(s)	13, 65
HindIII	AAGCTT	3 cut(s)	145, 533, 544
HinfI	GANTC	3 cut(s)	658, 973, 1156
HphI	GGTGA	4 cut(s)	326, 738, 968, 1193
Hpy166II	GTNNAC	3 cut(s)	122, 452, 1177
Hpy188I	TCNGA	7 cut(s)	172, 272, 1127, 1137, 1155, 1237, 1265
Hpy8I	GTNNAC	3 cut(s)	122, 452, 1177
Hpy99I	CGWCG	1 cut(s)	51
HpyAV	CCTTC	3 cut(s)	311, 659, 1276
HpyCH4III	ACNGT	3 cut(s)	473, 621, 710
HpyCH4IV	ACGT	2 cut(s)	258, 829
HpyCH4V	TGCA	8 cut(s)	152, 439, 481, 643, 951, 1106, 1168, 1210
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 442, 1256
HpyF3I	CTNAG	8 cut(s)	9, 87, 102, 937, 1062, 1220, 1262, 1292
HpySE526I	ACGT	2 cut(s)	258, 829
Hsp92II	CATG	8 cut(s)	231, 458, 643, 647, 980, 1003, 1061, 1175
HspAI	GCGC	2 cut(s)	13, 65
KpnI	GGTACC	1 cut(s)	324
Kzo9I	GATC	3 cut(s)	43, 420, 743
LmnI	GCTCC	4 cut(s)	877, 921, 988, 1006
Lsp1109I	GCAGC	4 cut(s)	423, 425, 1118, 1180
LweI	GCATC	2 cut(s)	161, 1000
MaeII	ACGT	2 cut(s)	258, 829
MaeIII	GTNAC	3 cut(s)	16, 139, 506
MalI	GATC	3 cut(s)	45, 422, 745
MbiI	CCGCTC	2 cut(s)	579, 1009
MboI	GATC	3 cut(s)	43, 420, 743
MboII	GAAGA	2 cut(s)	1054, 1142
MhlI	GDGCHC	1 cut(s)	874
MlsI	TGGCCA	1 cut(s)	1096
MluCI	AATT	7 cut(s)	277, 381, 426, 482, 571, 774, 982
MluNI	TGGCCA	1 cut(s)	1096
MlyI	GAGTC	1 cut(s)	967
MmeI	TCCRAC	1 cut(s)	603
Mox20I	TGGCCA	1 cut(s)	1096
Mph1103I	ATGCAT	1 cut(s)	645
MroXI	GAANNNNTTC	1 cut(s)	217
MscI	TGGCCA	1 cut(s)	1096
MseI	TTAA	3 cut(s)	281, 768, 795
Msp20I	TGGCCA	1 cut(s)	1096
Mva1269I	GAATGC	1 cut(s)	635
MvnI	CGCG	4 cut(s)	15, 67, 859, 1114
MwoI	GCNNNNNNNGC	3 cut(s)	98, 442, 1256
NcoI	CCATGG	1 cut(s)	227
NdeII	GATC	3 cut(s)	43, 420, 743
NlaIII	CATG	8 cut(s)	231, 458, 643, 647, 980, 1003, 1061, 1175
NlaIV	GGNNCC	5 cut(s)	93, 165, 220, 322, 1193
NmuCI	GTSAC	2 cut(s)	16, 139
NruI	TCGCGA	1 cut(s)	1114
NsiI	ATGCAT	1 cut(s)	645
NspI	RCATGY	2 cut(s)	1061, 1175
PagI	TCATGA	1 cut(s)	976
PcsI	WCGNNNNNNNCGW	1 cut(s)	52
PctI	GAATGC	1 cut(s)	635
PdmI	GAANNNNTTC	1 cut(s)	217
PfeI	GAWTC	2 cut(s)	658, 1156
PflFI	GACNNNGTC	1 cut(s)	596
PkrI	GCNGC	4 cut(s)	415, 438, 1108, 1170
PleI	GAGTC	1 cut(s)	967
PpsI	GAGTC	1 cut(s)	967
Ppu21I	YACGTR	1 cut(s)	259
PpuMI	RGGWCCY	1 cut(s)	1192
PsiI	TTATAA	1 cut(s)	726
Psp124BI	GAGCTC	1 cut(s)	874
Psp5II	RGGWCCY	1 cut(s)	1192
PspFI	CCCAGC	2 cut(s)	75, 1029
PspN4I	GGNNCC	5 cut(s)	93, 165, 220, 322, 1193
PspPI	GGNCC	5 cut(s)	91, 539, 900, 1019, 1192
PspPPI	RGGWCCY	1 cut(s)	1192
PsyI	GACNNNGTC	1 cut(s)	596
RruI	TCGCGA	1 cut(s)	1114
RsaI	GTAC	3 cut(s)	322, 1014, 1226
RsaNI	GTAC	3 cut(s)	321, 1013, 1225
SacI	GAGCTC	1 cut(s)	874
SaqAI	TTAA	3 cut(s)	281, 768, 795
SatI	GCNGC	4 cut(s)	414, 437, 1107, 1169
Sau3AI	GATC	3 cut(s)	43, 420, 743
Sau96I	GGNCC	5 cut(s)	91, 539, 900, 1019, 1192
SchI	GAGTC	1 cut(s)	967
SduI	GDGCHC	1 cut(s)	874
SfaNI	GCATC	2 cut(s)	161, 1000
SinI	GGWCC	3 cut(s)	539, 900, 1192
SmlI	CTYRAG	1 cut(s)	560
SmoI	CTYRAG	1 cut(s)	560
Sse9I	AATT	7 cut(s)	277, 381, 426, 482, 571, 774, 982
SsiI	CCGC	3 cut(s)	577, 1009, 1185
SstI	GAGCTC	1 cut(s)	874
StyI	CCWWGG	1 cut(s)	227
TaaI	ACNGT	3 cut(s)	473, 621, 710
TaiI	ACGT	2 cut(s)	261, 832
TaqI	TCGA	4 cut(s)	55, 211, 423, 742
TaqII	GACCGA	1 cut(s)	1068
TasI	AATT	7 cut(s)	277, 381, 426, 482, 571, 774, 982
TfiI	GAWTC	2 cut(s)	658, 1156
Tru1I	TTAA	3 cut(s)	281, 768, 795
Tru9I	TTAA	3 cut(s)	281, 768, 795
TseFI	GTSAC	2 cut(s)	16, 139
TseI	GCWGC	4 cut(s)	413, 436, 1106, 1168
Tsp45I	GTSAC	2 cut(s)	16, 139
TspDTI	ATGAA	5 cut(s)	628, 650, 840, 993, 1260
TspGWI	ACGGA	3 cut(s)	35, 502, 590
Tth111I	GACNNNGTC	1 cut(s)	596
VpaK11BI	GGWCC	3 cut(s)	539, 900, 1192
XagI	CCTNNNNNAGG	1 cut(s)	1208
XapI	RAATTY	3 cut(s)	277, 774, 982
XceI	RCATGY	2 cut(s)	1061, 1175
XmiI	GTMKAC	1 cut(s)	1176
XmnI	GAANNNNTTC	1 cut(s)	217
Zsp2I	ATGCAT	1 cut(s)	645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.