MD14G1169100.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
26265659 .. 26269509
3851 bp
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UTR
Exon/CDS
Intron
MD14G1169100.v1.1.491

Sequence Viewer

Length: 1302 bp
ATGGAGACGGAGCGCGTGACGGAGTTTCCTTTCGCTTACTTGGATCGCCGCCCTCGAAAGAGGGCGCGTTTGGGCTGGGACGTTCCTCAGGCCCCAAAGGCTCAGGTAGGAATGTTTTGTGGACAAGAGCTTGGGAATGTGACAAGCTATGCATCTTTGATGGCACCCTCAGAGACCAGTACTATTTCTCTATTTGATAAGGAAGTGACTCGAAATGGTTCCCCCCCATGGAGAGAAGATGACAAAGATGGGCATTACATGTTTTCGCTTGGAGAGAATTTAACAACTCGCTACAAAATCCAGAGCAAAATGGGTGAAGGTACCTTTGGTCAGGTGTTGGAATGCTGGGACAGAGAAAAAAGGGAAATGGTTGCCATAAAAATTGTTCGTGGCATCAAGAAATATCGCGAAGCAGCAATGATAGAAATCGAAGTGCTGCAACAGCTTGGTAAACATGATAAAGGTGGCAATCGTTGTGTGCAATTACGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTGTTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCAAGAAAAACAATTACCGCTCATTTCCGATTGACCTTGTCCGTGAGATTGGAAGACAACTGTTGGAATGTGTAGCATTCATGCATGATCTTCGTCTTATTCATACCGACTTGAAGCCAGAGAATATACTCCTTGTTTCTCAGGATTATGTTAAAGTTCCTGATTACAATAAGAGCTCATCTCGATCACCCAAAGATAGCTCCTATTTTAAGAGAGTACCAAAGTCGAGTGCTATTAAAGTTATTGATTTTGGTAGCACAACTTACGAGCGTCAAGATCAAACCTATATTGTATCAACACGGCATTACCGAGCACCAGAGGTTATTCTTGGGCTGGGATGGACCTACCCTTGCGATGTATGGAGCATTGGTTGTATCCTGGTGGAGTTATGCACGGGTGAAGCCTTGTTCCAGACTCACGAGAATTTGGAGCACCTCGCCATGATGGAGCGGGTACTTGGTTCCCTACCCCAGCACATGTTGAAAAGAGCAGACCGACATGCTGAGAAGTATGTTAGAAGGGGTAGATTGGATTGGCCAGAGGGTGCAGCTTCTAGAGAGAGTATCAGAGCTGTTCAGAAGCTTCCTCGGCTCCAGAATCTTATAATGCAGCACGTAGACCATTCCGCCGGGGACTTTATTCACCTCTTGCAGGGTCTGCTTAGGTACGACCCCTCGGATAGGCTTTCCGCTCGCGAAGCCCTCCGACATTCTTTTTTCACGAAGGACAGCCTCAGGAGATGA

Protein Analysis

434

Amino Acids

50.3

Weight (kDa)

9.08

Isoelectric Point (pI)

52.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 426 2.9e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 99 - 336 7.2e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1163
Acc65I GGTACC 1 cut(s) 320
AccB1I GGYRCC 2 cut(s) 163, 320
AccBSI CCGCTC 3 cut(s) 579, 1009, 1250
AccI GTMKAC 1 cut(s) 1176
AccII CGCG 4 cut(s) 15, 67, 408, 1254
AciI CCGC 5 cut(s) 49, 577, 1009, 1185, 1248
AclWI GGATC 1 cut(s) 51
AcoI YGGCCR 1 cut(s) 1094
AcsI RAATTY 2 cut(s) 277, 982
AfaI GTAC 5 cut(s) 181, 322, 777, 1014, 1226
AfiI CCNNNNNNNGG 3 cut(s) 228, 1210, 1239
AflIII ACRYGT 2 cut(s) 258, 1035
AgsI TTSAA 2 cut(s) 673, 1042
AjnI CCWGG 1 cut(s) 936
AjuI GAANNNNNNNTTGG 2 cut(s) 309, 341
Alw21I GWGCWC 3 cut(s) 737, 874, 993
Alw26I GTCTC 1 cut(s) 167
AlwI GGATC 1 cut(s) 51
AlwNI CAGNNNCTG 1 cut(s) 1216
AoxI GGCC 2 cut(s) 90, 1094
ApeKI GCWGC 4 cut(s) 413, 436, 1106, 1168
ApoI RAATTY 2 cut(s) 277, 982
Asp700I GAANNNNTTC 1 cut(s) 217
Asp718I GGTACC 1 cut(s) 320
AspLEI GCGC 2 cut(s) 15, 67
AspS9I GGNCC 3 cut(s) 91, 539, 900
AsuC2I CCSGG 1 cut(s) 1189
AsuHPI GGTGA 4 cut(s) 326, 738, 968, 1193
AvaII GGWCC 2 cut(s) 539, 900
AxyI CCTNAGG 2 cut(s) 87, 1292
BalI TGGCCA 1 cut(s) 1096
BanI GGYRCC 2 cut(s) 163, 320
BanII GRGCYC 1 cut(s) 737
BauI CACGAG 1 cut(s) 977
BbsI GAAGAC 1 cut(s) 619
Bbv12I GWGCWC 3 cut(s) 737, 874, 993
BbvI GCAGC 4 cut(s) 423, 425, 1118, 1180
BccI CCATC 4 cut(s) 154, 242, 891, 997
BceAI ACGGC 1 cut(s) 875
BcgI CGANNNNNNTGC 2 cut(s) 632, 666
BciT130I CCWGG 1 cut(s) 938
BciVI GTATCC 1 cut(s) 944
BcnI CCSGG 1 cut(s) 1189
BcoDI GTCTC 1 cut(s) 167
BfaI CTAG 1 cut(s) 1113
BfuI GTATCC 1 cut(s) 944
BglI GCCNNNNNGGC 1 cut(s) 98
BisI GCNGC 5 cut(s) 49, 414, 437, 1107, 1169
BlsI GCNGC 5 cut(s) 50, 415, 438, 1108, 1170
BmcAI AGTACT 1 cut(s) 181
Bme1390I CCNGG 2 cut(s) 938, 1189
Bme18I GGWCC 2 cut(s) 539, 900
BmgT120I GGNCC 3 cut(s) 91, 539, 900
BmiI GGNNCC 6 cut(s) 93, 165, 220, 322, 1021, 1151
BmrFI CCNGG 2 cut(s) 938, 1189
BmsI GCATC 2 cut(s) 161, 402
BpiI GAAGAC 1 cut(s) 619
BplI GAGNNNNNCTC 2 cut(s) 724, 756
BpmI CTGGAG 1 cut(s) 1136
Bpu10I CCTNAGC 2 cut(s) 102, 1220
BpuEI CTTGAG 1 cut(s) 545
BpuMI CCSGG 1 cut(s) 1189
BsaAI YACGTR 1 cut(s) 1174
BsaBI GATNNNNATC 1 cut(s) 425
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 4 cut(s) 227, 1145, 1188, 1233
BsaXI ACNNNNNCTCC 2 cut(s) 913, 943
Bsc4I CCNNNNNNNGG 3 cut(s) 228, 1210, 1239
Bse1I ACTGG 2 cut(s) 177, 497
Bse21I CCTNAGG 2 cut(s) 87, 1292
Bse3DI GCAATG 1 cut(s) 423
Bse8I GATNNNNATC 1 cut(s) 425
BseBI CCWGG 1 cut(s) 938
BseDI CCNNGG 4 cut(s) 227, 1145, 1188, 1233
BseGI GGATG 1 cut(s) 902
BseJI GATNNNNATC 1 cut(s) 425
BseLI CCNNNNNNNGG 3 cut(s) 228, 1210, 1239
BseMI GCAATG 1 cut(s) 423
BseMII CTCAG 5 cut(s) 101, 116, 183, 713, 1053
BseNI ACTGG 2 cut(s) 177, 497
BseXI GCAGC 4 cut(s) 423, 425, 1118, 1180
BseYI CCCAGC 4 cut(s) 75, 345, 892, 1029
BsgI GTGCAG 1 cut(s) 1125
Bsh1236I CGCG 4 cut(s) 15, 67, 408, 1254
BshFI GGCC 2 cut(s) 92, 1096
BshNI GGYRCC 2 cut(s) 163, 320
BsiHKAI GWGCWC 3 cut(s) 737, 874, 993
BsiSI CCGG 1 cut(s) 1188
BslFI GGGAC 3 cut(s) 92, 362, 1205
BslI CCNNNNNNNGG 3 cut(s) 228, 1210, 1239
BsmAI GTCTC 1 cut(s) 167
BsmFI GGGAC 3 cut(s) 92, 362, 1205
BsmI GAATGC 2 cut(s) 347, 635
BsnI GGCC 2 cut(s) 92, 1096
Bso31I GGTCTC 1 cut(s) 167
Bsp1286I GDGCHC 3 cut(s) 737, 874, 993
Bsp143I GATC 4 cut(s) 43, 646, 743, 835
Bsp19I CCATGG 1 cut(s) 227
Bsp68I TCGCGA 2 cut(s) 408, 1254
BspACI CCGC 5 cut(s) 49, 577, 1009, 1185, 1248
BspANI GGCC 2 cut(s) 92, 1096
BspCNI CTCAG 5 cut(s) 100, 115, 182, 712, 1054
BspFNI CGCG 4 cut(s) 15, 67, 408, 1254
BspLI GGNNCC 6 cut(s) 93, 165, 220, 322, 1021, 1151
BspPI GGATC 1 cut(s) 51
BspT107I GGYRCC 2 cut(s) 163, 320
BspTNI GGTCTC 1 cut(s) 167
BsrBI CCGCTC 3 cut(s) 579, 1009, 1250
BsrDI GCAATG 1 cut(s) 423
BsrI ACTGG 2 cut(s) 177, 497
BssECI CCNNGG 4 cut(s) 227, 1145, 1188, 1233
BssMI GATC 4 cut(s) 43, 646, 743, 835
BssSI CACGAG 1 cut(s) 977
BssT1I CCWWGG 1 cut(s) 227
Bst2BI CACGAG 1 cut(s) 977
Bst2UI CCWGG 1 cut(s) 938
Bst4CI ACNGT 1 cut(s) 621
BstAPI GCANNNNNTGC 1 cut(s) 1216
BstBAI YACGTR 1 cut(s) 1174
BstC8I GCNNGC 1 cut(s) 1252
BstDEI CTNAG 7 cut(s) 87, 102, 169, 699, 1062, 1220, 1292
BstDSI CCRYGG 1 cut(s) 227
BstENI CCTNNNNNAGG 2 cut(s) 1208, 1237
BstF5I GGATG 1 cut(s) 902
BstFNI CGCG 4 cut(s) 15, 67, 408, 1254
BstHHI GCGC 2 cut(s) 15, 67
BstKTI GATC 4 cut(s) 46, 649, 746, 838
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 4 cut(s) 43, 646, 743, 835
BstMWI GCNNNNNNNGC 5 cut(s) 98, 442, 1147, 1216, 1256
BstNI CCWGG 1 cut(s) 938
BstNSI RCATGY 3 cut(s) 262, 1039, 1061
BstSCI CCNGG 2 cut(s) 936, 1187
BstUI CGCG 4 cut(s) 15, 67, 408, 1254
BstV1I GCAGC 4 cut(s) 423, 425, 1118, 1180
BstV2I GAAGAC 1 cut(s) 619
Bsu36I CCTNAGG 2 cut(s) 87, 1292
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 2 cut(s) 92, 1096
BtgI CCRYGG 1 cut(s) 227
BtgZI GCGATG 1 cut(s) 927
BtsCI GGATG 1 cut(s) 902
BtuMI TCGCGA 2 cut(s) 408, 1254
Cac8I GCNNGC 1 cut(s) 1252
CaiI CAGNNNCTG 1 cut(s) 1216
CfoI GCGC 2 cut(s) 15, 67
Cfr13I GGNCC 3 cut(s) 91, 539, 900
CseI GACGC 1 cut(s) 818
Csp6I GTAC 5 cut(s) 180, 321, 776, 1013, 1225
CviAII CATG 8 cut(s) 228, 259, 455, 640, 644, 1000, 1036, 1058
CviQI GTAC 5 cut(s) 180, 321, 776, 1013, 1225
DdeI CTNAG 7 cut(s) 87, 102, 169, 699, 1062, 1220, 1292
DpnI GATC 4 cut(s) 45, 648, 745, 837
DpnII GATC 4 cut(s) 43, 646, 743, 835
EaeI YGGCCR 1 cut(s) 1094
EciI GGCGGA 1 cut(s) 1174
Ecl136II GAGCTC 1 cut(s) 735
Eco130I CCWWGG 1 cut(s) 227
Eco24I GRGCYC 1 cut(s) 737
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 2 cut(s) 539, 900
Eco53kI GAGCTC 1 cut(s) 735
Eco81I CCTNAGG 2 cut(s) 87, 1292
EcoICRI GAGCTC 1 cut(s) 735
EcoNI CCTNNNNNAGG 2 cut(s) 1208, 1237
EcoO109I RGGNCCY 1 cut(s) 91
EcoRII CCWGG 1 cut(s) 936
EcoT14I CCWWGG 1 cut(s) 227
EcoT22I ATGCAT 2 cut(s) 154, 645
EcoT38I GRGCYC 1 cut(s) 737
ErhI CCWWGG 1 cut(s) 227
FaeI CATG 8 cut(s) 231, 262, 458, 643, 647, 1003, 1039, 1061
FaqI GGGAC 3 cut(s) 92, 362, 1205
FatI CATG 8 cut(s) 227, 258, 454, 639, 643, 999, 1035, 1057
FauI CCCGC 1 cut(s) 1002
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 5 cut(s) 49, 414, 437, 1107, 1169
FokI GGATG 1 cut(s) 909
FriOI GRGCYC 1 cut(s) 737
Fsp4HI GCNGC 5 cut(s) 49, 414, 437, 1107, 1169
FspBI CTAG 1 cut(s) 1113
GlaI GCGC 2 cut(s) 14, 66
GluI GCNGC 5 cut(s) 49, 414, 437, 1107, 1169
GsaI CCCAGC 4 cut(s) 79, 349, 896, 1033
GsuI CTGGAG 1 cut(s) 1136
HaeIII GGCC 2 cut(s) 92, 1096
HapII CCGG 1 cut(s) 1188
HgaI GACGC 1 cut(s) 818
HhaI GCGC 2 cut(s) 15, 67
Hin1II CATG 8 cut(s) 231, 262, 458, 643, 647, 1003, 1039, 1061
Hin6I GCGC 2 cut(s) 13, 65
HinP1I GCGC 2 cut(s) 13, 65
HindIII AAGCTT 3 cut(s) 533, 544, 1139
HinfI GANTC 3 cut(s) 208, 973, 1156
HpaII CCGG 1 cut(s) 1188
HphI GGTGA 4 cut(s) 326, 738, 968, 1193
Hpy166II GTNNAC 3 cut(s) 122, 452, 1177
Hpy188I TCNGA 6 cut(s) 172, 588, 1127, 1137, 1237, 1265
Hpy8I GTNNAC 3 cut(s) 122, 452, 1177
HpyAV CCTTC 3 cut(s) 311, 1071, 1276
HpyCH4III ACNGT 1 cut(s) 621
HpyCH4IV ACGT 2 cut(s) 81, 1173
HpyCH4V TGCA 8 cut(s) 152, 439, 481, 643, 951, 1106, 1168, 1210
HpyF10VI GCNNNNNNNGC 5 cut(s) 98, 442, 1147, 1216, 1256
HpyF3I CTNAG 7 cut(s) 87, 102, 169, 699, 1062, 1220, 1292
HpySE526I ACGT 2 cut(s) 81, 1173
Hsp92II CATG 8 cut(s) 231, 262, 458, 643, 647, 1003, 1039, 1061
HspAI GCGC 2 cut(s) 13, 65
KpnI GGTACC 1 cut(s) 324
Kzo9I GATC 4 cut(s) 43, 646, 743, 835
LmnI GCTCC 6 cut(s) 10, 764, 921, 988, 1006, 1155
Lsp1109I GCAGC 4 cut(s) 423, 425, 1118, 1180
LweI GCATC 2 cut(s) 161, 402
MaeI CTAG 1 cut(s) 1113
MaeII ACGT 2 cut(s) 81, 1173
MaeIII GTNAC 4 cut(s) 16, 139, 205, 506
MalI GATC 4 cut(s) 45, 648, 745, 837
MbiI CCGCTC 3 cut(s) 579, 1009, 1250
MboI GATC 4 cut(s) 43, 646, 743, 835
MboII GAAGA 3 cut(s) 248, 624, 641
MhlI GDGCHC 3 cut(s) 737, 874, 993
MlsI TGGCCA 1 cut(s) 1096
MluCI AATT 5 cut(s) 277, 381, 482, 571, 982
MluNI TGGCCA 1 cut(s) 1096
MlyI GAGTC 2 cut(s) 202, 967
MmeI TCCRAC 3 cut(s) 318, 603, 1288
Mox20I TGGCCA 1 cut(s) 1096
Mph1103I ATGCAT 2 cut(s) 154, 645
MroXI GAANNNNTTC 1 cut(s) 217
MscI TGGCCA 1 cut(s) 1096
MseI TTAA 4 cut(s) 281, 711, 768, 795
Msp20I TGGCCA 1 cut(s) 1096
MspI CCGG 1 cut(s) 1188
MspR9I CCNGG 2 cut(s) 938, 1189
Mva1269I GAATGC 2 cut(s) 347, 635
MvaI CCWGG 1 cut(s) 938
MvnI CGCG 4 cut(s) 15, 67, 408, 1254
MwoI GCNNNNNNNGC 5 cut(s) 98, 442, 1147, 1216, 1256
NciI CCSGG 1 cut(s) 1189
NcoI CCATGG 1 cut(s) 227
NdeII GATC 4 cut(s) 43, 646, 743, 835
NlaIII CATG 8 cut(s) 231, 262, 458, 643, 647, 1003, 1039, 1061
NlaIV GGNNCC 6 cut(s) 93, 165, 220, 322, 1021, 1151
NmeAIII GCCGAG 1 cut(s) 1126
NmuCI GTSAC 3 cut(s) 16, 139, 205
NruI TCGCGA 2 cut(s) 408, 1254
NsiI ATGCAT 2 cut(s) 154, 645
NspI RCATGY 3 cut(s) 262, 1039, 1061
PciI ACATGT 2 cut(s) 258, 1035
PcsI WCGNNNNNNNCGW 2 cut(s) 52, 865
PctI GAATGC 2 cut(s) 347, 635
PdmI GAANNNNTTC 1 cut(s) 217
PfeI GAWTC 1 cut(s) 1156
PflFI GACNNNGTC 1 cut(s) 596
PkrI GCNGC 5 cut(s) 50, 415, 438, 1108, 1170
PleI GAGTC 2 cut(s) 202, 967
PpsI GAGTC 2 cut(s) 202, 967
Ppu21I YACGTR 1 cut(s) 1174
PscI ACATGT 2 cut(s) 258, 1035
PsiI TTATAA 1 cut(s) 1163
Psp124BI GAGCTC 1 cut(s) 737
Psp6I CCWGG 1 cut(s) 936
PspFI CCCAGC 4 cut(s) 75, 345, 892, 1029
PspGI CCWGG 1 cut(s) 936
PspN4I GGNNCC 6 cut(s) 93, 165, 220, 322, 1021, 1151
PspPI GGNCC 3 cut(s) 91, 539, 900
PstNI CAGNNNCTG 1 cut(s) 1216
PsyI GACNNNGTC 1 cut(s) 596
RruI TCGCGA 2 cut(s) 408, 1254
RsaI GTAC 5 cut(s) 181, 322, 777, 1014, 1226
RsaNI GTAC 5 cut(s) 180, 321, 776, 1013, 1225
SacI GAGCTC 1 cut(s) 737
SaqAI TTAA 4 cut(s) 281, 711, 768, 795
SatI GCNGC 5 cut(s) 49, 414, 437, 1107, 1169
Sau3AI GATC 4 cut(s) 43, 646, 743, 835
Sau96I GGNCC 3 cut(s) 91, 539, 900
ScaI AGTACT 1 cut(s) 181
SchI GAGTC 2 cut(s) 202, 967
ScrFI CCNGG 2 cut(s) 938, 1189
SduI GDGCHC 3 cut(s) 737, 874, 993
SfaNI GCATC 2 cut(s) 161, 402
SinI GGWCC 2 cut(s) 539, 900
SmlI CTYRAG 1 cut(s) 560
SmoI CTYRAG 1 cut(s) 560
Sse9I AATT 5 cut(s) 277, 381, 482, 571, 982
SsiI CCGC 5 cut(s) 49, 577, 1009, 1185, 1248
SspMI CTAG 1 cut(s) 1113
SstI GAGCTC 1 cut(s) 737
StyD4I CCNGG 2 cut(s) 936, 1187
StyI CCWWGG 1 cut(s) 227
TaaI ACNGT 1 cut(s) 621
TaiI ACGT 2 cut(s) 84, 1176
TaqI TCGA 5 cut(s) 55, 211, 429, 742, 785
TaqII GACCGA 1 cut(s) 1068
TasI AATT 5 cut(s) 277, 381, 482, 571, 982
TatI WGTACW 1 cut(s) 179
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 1 cut(s) 1156
Tru1I TTAA 4 cut(s) 281, 711, 768, 795
Tru9I TTAA 4 cut(s) 281, 711, 768, 795
TseFI GTSAC 3 cut(s) 16, 139, 205
TseI GCWGC 4 cut(s) 413, 436, 1106, 1168
Tsp45I GTSAC 3 cut(s) 16, 139, 205
TspDTI ATGAA 2 cut(s) 628, 650
TspGWI ACGGA 4 cut(s) 23, 35, 502, 590
Tth111I GACNNNGTC 1 cut(s) 596
VpaK11BI GGWCC 2 cut(s) 539, 900
XagI CCTNNNNNAGG 2 cut(s) 1208, 1237
XapI RAATTY 2 cut(s) 277, 982
XbaI TCTAGA 1 cut(s) 1112
XceI RCATGY 3 cut(s) 262, 1039, 1061
XmiI GTMKAC 1 cut(s) 1176
XmnI GAANNNNTTC 1 cut(s) 217
XspI CTAG 1 cut(s) 1113
ZrmI AGTACT 1 cut(s) 181
Zsp2I ATGCAT 2 cut(s) 154, 645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.