AT4G24830

argininosuccinate synthase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
12792827 .. 12796031
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G24830.1

Sequence Viewer

Length: 1485 bp
ATGGCTGAAATCTCGGCGACTTCGTTTCCTTCTTCTTCTTCCTCTGCTCTCGTCATCCGTAGCTCCCACAATGGTAGCTTAAAATGTCAGAATGTAGCTGTTCCAAAAACTACTTCCCAGTTCCAAGAGTTATCTCTGAAACGAAGCCAGCTTGTTGGCAATGCCGTTGTTACCGGTCATGTTACCGGATCCCGCAGCTGCAAGAATCAAGCTATTCGAGCTGTTCTATCCGGTGATGGAACCGCCTTGACTACTGATTCAAAGGAGGCTGGACTTCGTGGAAAACTGAAAAAGGTCGTTCTAGCTTACAGTGGAGGCTTAGACACCTCTGTCATTGTGCCATGGCTTAAGGAGAACTATGGTTGTGAAGTTGTGTGCTTCACTGCTGATGTTGGTCAGGGCATAAAAGAGTTAGAGGGTTTAGAACAAAAGGCTAAGGCTAGTGGTGCTTCTCAGTTGGTCGTTAAGGATCTCACAGAGGAGTTTGTGAAAGATTTCATCTTCCCTTGTCTTAGAGCTGGTGCCATCTATGAACGAAAATACTTGCTTGGTACCTCCATGGCTCGACCTGTCATTGCTAAGGCCATGGTTGATGTAGCAGCAGAGGTTGGAGCTGATGCCGTTGCACATGGGTGTACTGGAAAAGGAAATGACCAGGTTCGGTTTGAGCTCACCTTCTTTTCATTAAACCCTGAACTTAAAGTTGTGGCACCATGGAGAGAATGGGAAATCCAAGGCCGAGAAGATGCTATTGAGTATGCAAAGAAGCATAATGTTCCCGTCCCAGTGACAAAGAAGTCCATTTACAGCCGGGACAGAAACCTGTGGCACCTTAGTCATGAGGGTGATCTATTGGAAGATCCAGCAAACGAGCCAAAGAAAGATATGTACATGATGAGTGTGGATCCTGAAGATGCTCCTGATCAGCCTGAATACATCGAGATCGGGATAGAATCTGGACTTCCAGTGGCGCTGAACGGGAAGGCTCTGAGTCCAGCCACACTTCTGGCCGAGCTAAACACAATAGGAGGAAAGCACGGGATTGGGCGGATTGACATGGTTGAGAACCGTCTGGTTGGGATGAAATCACGAGGTGTGTATGAAACTCCTGGAGGCACTATCCTCTTTGCAGCTGTACAGGAACTAGAATCCCTCACTCTAGACAGAGAGAGTATTCAGGTAAAAGACACATTAGCACTGAAATATGCAGAGATGGTCTACGCAGGAAGATGGTTTGATCCGCTTAGGGAGTCCATGGACGCTTTCATGGAGAAGATAACCGAGACAACCACGGGATCTGTGACACTGAAGCTGTACAAAGGATCTGTGTCGGTTACAGGGCGTCAGAGTCCTAACAGTCTGTATAGACAGGACATATCTTCGTTTGAAGGGAGTGAGATCTACAACCAAGCGGATGCAGCCGGGTTTATTCGTCTTTACGGGCTTCCAATGAAAATTAGAGCTATGCTTAAGAAAATTAGCTAG

Protein Analysis

494

Amino Acids

53.84

Weight (kDa)

6.25

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arginosuc_synth PF00764 98 - 260 8.2e-68 Arginosuccinate synthase N-terminal HUP domain
Arginosuc_syn_C PF20979 269 - 486 1.4e-81 Arginosuccinate synthase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 329, 796
Acc65I GGTACC 1 cut(s) 551
AccB1I GGYRCC 4 cut(s) 521, 551, 709, 828
AccI GTMKAC 1 cut(s) 1218
AciI CCGC 5 cut(s) 193, 243, 1048, 1241, 1412
AclWI GGATC 9 cut(s) 183, 196, 477, 854, 899, 912, 1232, 1303, 1330
AcoI YGGCCR 1 cut(s) 1008
AcuI CTGAAG 2 cut(s) 930, 1328
AcyI GRCGYC 1 cut(s) 1342
AdeI CACNNNGTG 1 cut(s) 1094
AfaI GTAC 5 cut(s) 553, 637, 890, 1137, 1316
AflII CTTAAG 2 cut(s) 347, 1469
AgeI ACCGGT 1 cut(s) 173
AgsI TTSAA 2 cut(s) 261, 1388
AjnI CCWGG 2 cut(s) 654, 1108
AjuI GAANNNNNNNTTGG 2 cut(s) 97, 129
AleI CACNNNNGTG 1 cut(s) 631
Alw21I GWGCWC 1 cut(s) 672
Alw26I GTCTC 1 cut(s) 1277
AlwI GGATC 9 cut(s) 183, 196, 477, 854, 899, 912, 1232, 1303, 1330
AoxI GGCC 3 cut(s) 582, 736, 1008
ApeKI GCWGC 5 cut(s) 195, 198, 599, 1130, 1418
AsiGI ACCGGT 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 494
Asp718I GGTACC 1 cut(s) 551
AspLEI GCGC 1 cut(s) 973
AsuC2I CCSGG 2 cut(s) 812, 1423
AsuHPI GGTGA 3 cut(s) 245, 664, 857
BamHI GGATCC 2 cut(s) 188, 904
BanI GGYRCC 4 cut(s) 521, 551, 709, 828
BanII GRGCYC 1 cut(s) 672
BarI GAAGNNNNNNTAC 2 cut(s) 788, 820
BauI CACGAG 1 cut(s) 1089
Bbv12I GWGCWC 1 cut(s) 672
BbvI GCAGC 5 cut(s) 185, 207, 611, 1142, 1430
BccI CCATC 4 cut(s) 230, 533, 1207, 1224
BceAI ACGGC 2 cut(s) 149, 605
BciT130I CCWGG 2 cut(s) 656, 1110
BclI TGATCA 1 cut(s) 922
BcnI CCSGG 2 cut(s) 812, 1423
BcoDI GTCTC 1 cut(s) 1277
BfaI CTAG 5 cut(s) 302, 441, 1145, 1160, 1483
BfoI RGCGCY 1 cut(s) 974
BfrI CTTAAG 2 cut(s) 347, 1469
BglII AGATCT 1 cut(s) 1398
BisI GCNGC 5 cut(s) 196, 199, 600, 1131, 1419
BlsI GCNGC 5 cut(s) 197, 200, 601, 1132, 1420
Bme1390I CCNGG 4 cut(s) 656, 812, 1110, 1423
BmiI GGNNCC 7 cut(s) 190, 241, 523, 553, 711, 830, 906
BmrFI CCNGG 4 cut(s) 656, 812, 1110, 1423
BmrI ACTGGG 2 cut(s) 112, 779
BmsI GCATC 4 cut(s) 607, 736, 904, 1405
BmuI ACTGGG 2 cut(s) 112, 779
BpmI CTGGAG 1 cut(s) 1131
Bpu10I CCTNAGC 3 cut(s) 435, 579, 1244
BpuMI CCSGG 2 cut(s) 812, 1423
BsaHI GRCGYC 1 cut(s) 1342
BsaJI CCNNGG 7 cut(s) 341, 558, 585, 713, 733, 1254, 1290
BsaWI WCCGGW 3 cut(s) 173, 185, 230
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 4 cut(s) 118, 643, 785, 965
Bse3DI GCAATG 2 cut(s) 166, 573
BseBI CCWGG 2 cut(s) 656, 1110
BseDI CCNNGG 7 cut(s) 341, 558, 585, 713, 733, 1254, 1290
BseGI GGATG 3 cut(s) 54, 1086, 1420
BseMI GCAATG 2 cut(s) 166, 573
BseMII CTCAG 2 cut(s) 467, 980
BseNI ACTGG 4 cut(s) 118, 643, 785, 965
BseRI GAGGAG 1 cut(s) 494
BseXI GCAGC 5 cut(s) 185, 207, 611, 1142, 1430
BshFI GGCC 3 cut(s) 584, 738, 1010
BshNI GGYRCC 4 cut(s) 521, 551, 709, 828
BshTI ACCGGT 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 672
BsiSI CCGG 5 cut(s) 174, 186, 231, 811, 1422
BslFI GGGAC 2 cut(s) 767, 827
BsmAI GTCTC 1 cut(s) 1277
BsmFI GGGAC 2 cut(s) 767, 827
BsnI GGCC 3 cut(s) 584, 738, 1010
Bsp1286I GDGCHC 1 cut(s) 672
Bsp1407I TGTACA 3 cut(s) 888, 1135, 1314
Bsp19I CCATGG 5 cut(s) 341, 558, 585, 713, 1254
BspACI CCGC 5 cut(s) 193, 243, 1048, 1241, 1412
BspANI GGCC 3 cut(s) 584, 738, 1010
BspCNI CTCAG 2 cut(s) 466, 981
BspHI TCATGA 1 cut(s) 838
BspLI GGNNCC 7 cut(s) 190, 241, 523, 553, 711, 830, 906
BspPI GGATC 9 cut(s) 183, 196, 477, 854, 899, 912, 1232, 1303, 1330
BspT107I GGYRCC 4 cut(s) 521, 551, 709, 828
BspTI CTTAAG 2 cut(s) 347, 1469
BsrDI GCAATG 2 cut(s) 166, 573
BsrFI RCCGGY 1 cut(s) 173
BsrGI TGTACA 3 cut(s) 888, 1135, 1314
BsrI ACTGG 4 cut(s) 118, 643, 785, 965
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 7 cut(s) 341, 558, 585, 713, 733, 1254, 1290
BssNI GRCGYC 1 cut(s) 1342
BssSI CACGAG 1 cut(s) 1089
BssT1I CCWWGG 6 cut(s) 341, 558, 585, 713, 733, 1254
Bst2BI CACGAG 1 cut(s) 1089
Bst2UI CCWGG 2 cut(s) 656, 1110
Bst4CI ACNGT 3 cut(s) 311, 1070, 1358
BstACI GRCGYC 1 cut(s) 1342
BstAFI CTTAAG 2 cut(s) 347, 1469
BstAUI TGTACA 3 cut(s) 888, 1135, 1314
BstC8I GCNNGC 1 cut(s) 149
BstDEI CTNAG 8 cut(s) 319, 435, 453, 512, 579, 833, 989, 1244
BstDSI CCRYGG 6 cut(s) 341, 558, 585, 713, 1254, 1290
BstF5I GGATG 3 cut(s) 54, 1086, 1420
BstH2I RGCGCY 1 cut(s) 974
BstHHI GCGC 1 cut(s) 973
BstMAI GTCTC 1 cut(s) 1277
BstMWI GCNNNNNNNGC 3 cut(s) 218, 446, 1418
BstNI CCWGG 2 cut(s) 656, 1110
BstSCI CCNGG 4 cut(s) 654, 810, 1108, 1421
BstV1I GCAGC 5 cut(s) 185, 207, 611, 1142, 1430
BstX2I RGATCY 7 cut(s) 188, 469, 859, 904, 1295, 1322, 1398
BstXI CCANNNNNNTGG 2 cut(s) 155, 1006
BstYI RGATCY 7 cut(s) 188, 469, 859, 904, 1295, 1322, 1398
BsuRI GGCC 3 cut(s) 584, 738, 1010
BtgI CCRYGG 6 cut(s) 341, 558, 585, 713, 1254, 1290
BtsCI GGATG 3 cut(s) 54, 1086, 1420
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 6 cut(s) 316, 381, 792, 972, 1196, 1304
Cac8I GCNNGC 1 cut(s) 149
CciI TCATGA 1 cut(s) 838
CfoI GCGC 1 cut(s) 973
Cfr10I RCCGGY 1 cut(s) 173
CseI GACGC 2 cut(s) 1268, 1331
CsiI ACCWGGT 1 cut(s) 654
Csp6I GTAC 5 cut(s) 552, 636, 889, 1136, 1315
CspAI ACCGGT 1 cut(s) 173
CviQI GTAC 5 cut(s) 552, 636, 889, 1136, 1315
DdeI CTNAG 8 cut(s) 319, 435, 453, 512, 579, 833, 989, 1244
DraIII CACNNNGTG 1 cut(s) 1094
DrdI GACNNNNNNGTC 2 cut(s) 329, 796
DseDI GACNNNNNNGTC 2 cut(s) 329, 796
EaeI YGGCCR 1 cut(s) 1008
EciI GGCGGA 1 cut(s) 1063
Ecl136II GAGCTC 1 cut(s) 670
Eco130I CCWWGG 6 cut(s) 341, 558, 585, 713, 733, 1254
Eco24I GRGCYC 1 cut(s) 672
Eco53kI GAGCTC 1 cut(s) 670
Eco57I CTGAAG 2 cut(s) 930, 1328
EcoICRI GAGCTC 1 cut(s) 670
EcoRII CCWGG 2 cut(s) 654, 1108
EcoT14I CCWWGG 6 cut(s) 341, 558, 585, 713, 733, 1254
EcoT38I GRGCYC 1 cut(s) 672
ErhI CCWWGG 6 cut(s) 341, 558, 585, 713, 733, 1254
FaqI GGGAC 2 cut(s) 767, 827
FauI CCCGC 1 cut(s) 200
FbaI TGATCA 1 cut(s) 922
FblI GTMKAC 1 cut(s) 1218
Fnu4HI GCNGC 5 cut(s) 196, 199, 600, 1131, 1419
FokI GGATG 3 cut(s) 41, 1093, 1427
FriOI GRGCYC 1 cut(s) 672
Fsp4HI GCNGC 5 cut(s) 196, 199, 600, 1131, 1419
FspBI CTAG 5 cut(s) 302, 441, 1145, 1160, 1483
GlaI GCGC 1 cut(s) 972
GluI GCNGC 5 cut(s) 196, 199, 600, 1131, 1419
GsuI CTGGAG 1 cut(s) 1131
HaeII RGCGCY 1 cut(s) 974
HaeIII GGCC 3 cut(s) 584, 738, 1010
HapII CCGG 5 cut(s) 174, 186, 231, 811, 1422
HgaI GACGC 2 cut(s) 1268, 1331
HhaI GCGC 1 cut(s) 973
Hin1I GRCGYC 1 cut(s) 1342
Hin6I GCGC 1 cut(s) 971
HinP1I GCGC 1 cut(s) 971
HinfI GANTC 7 cut(s) 205, 257, 953, 991, 1148, 1250, 1348
HpaII CCGG 5 cut(s) 174, 186, 231, 811, 1422
HphI GGTGA 3 cut(s) 245, 664, 857
Hpy166II GTNNAC 2 cut(s) 636, 1219
Hpy188I TCNGA 4 cut(s) 90, 138, 990, 1347
Hpy188III TCNNGA 8 cut(s) 839, 908, 920, 940, 946, 957, 1089, 1160
Hpy8I GTNNAC 2 cut(s) 636, 1219
HpyAV CCTTC 4 cut(s) 39, 685, 976, 1382
HpyCH4III ACNGT 3 cut(s) 311, 1070, 1358
HpyCH4V TGCA 6 cut(s) 201, 626, 761, 1130, 1208, 1418
HpyF10VI GCNNNNNNNGC 3 cut(s) 218, 446, 1418
HpyF3I CTNAG 8 cut(s) 319, 435, 453, 512, 579, 833, 989, 1244
Hsp92I GRCGYC 1 cut(s) 1342
HspAI GCGC 1 cut(s) 971
KpnI GGTACC 1 cut(s) 555
Ksp22I TGATCA 1 cut(s) 922
LmnI GCTCC 3 cut(s) 68, 611, 922
Lsp1109I GCAGC 5 cut(s) 185, 207, 611, 1142, 1430
LweI GCATC 4 cut(s) 607, 736, 904, 1405
MabI ACCWGGT 1 cut(s) 654
MaeI CTAG 5 cut(s) 302, 441, 1145, 1160, 1483
MaeIII GTNAC 5 cut(s) 169, 181, 787, 1300, 1333
MflI RGATCY 7 cut(s) 188, 469, 859, 904, 1295, 1322, 1398
MhlI GDGCHC 1 cut(s) 672
MluCI AATT 2 cut(s) 1455, 1476
MlyI GAGTC 3 cut(s) 1000, 1259, 1357
MmeI TCCRAC 1 cut(s) 589
MroXI GAANNNNTTC 1 cut(s) 494
MseI TTAA 6 cut(s) 80, 348, 465, 686, 699, 1470
MslI CAYNNNNRTG 2 cut(s) 631, 843
MspA1I CMGCKG 2 cut(s) 198, 1133
MspCI CTTAAG 2 cut(s) 347, 1469
MspI CCGG 5 cut(s) 174, 186, 231, 811, 1422
MspR9I CCNGG 4 cut(s) 656, 812, 1110, 1423
MvaI CCWGG 2 cut(s) 656, 1110
MwoI GCNNNNNNNGC 3 cut(s) 218, 446, 1418
NciI CCSGG 2 cut(s) 812, 1423
NcoI CCATGG 5 cut(s) 341, 558, 585, 713, 1254
NlaIV GGNNCC 7 cut(s) 190, 241, 523, 553, 711, 830, 906
NmeAIII GCCGAG 2 cut(s) 764, 1036
NmuCI GTSAC 2 cut(s) 787, 1300
OliI CACNNNNGTG 1 cut(s) 631
PagI TCATGA 1 cut(s) 838
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PdmI GAANNNNTTC 1 cut(s) 494
PfeI GAWTC 4 cut(s) 205, 257, 953, 1148
PfoI TCCNGGA 1 cut(s) 1108
PinAI ACCGGT 1 cut(s) 173
PkrI GCNGC 5 cut(s) 197, 200, 601, 1132, 1420
PleI GAGTC 3 cut(s) 999, 1258, 1356
PpsI GAGTC 3 cut(s) 999, 1258, 1356
Psp124BI GAGCTC 1 cut(s) 672
Psp6I CCWGG 2 cut(s) 654, 1108
PspGI CCWGG 2 cut(s) 654, 1108
PspN4I GGNNCC 7 cut(s) 190, 241, 523, 553, 711, 830, 906
PsuI RGATCY 7 cut(s) 188, 469, 859, 904, 1295, 1322, 1398
PvuII CAGCTG 2 cut(s) 198, 1133
RsaI GTAC 5 cut(s) 553, 637, 890, 1137, 1316
RsaNI GTAC 5 cut(s) 552, 636, 889, 1136, 1315
RseI CAYNNNNRTG 2 cut(s) 631, 843
SacI GAGCTC 1 cut(s) 672
SaqAI TTAA 6 cut(s) 80, 348, 465, 686, 699, 1470
SatI GCNGC 5 cut(s) 196, 199, 600, 1131, 1419
SchI GAGTC 3 cut(s) 1000, 1259, 1357
ScrFI CCNGG 4 cut(s) 656, 812, 1110, 1423
SduI GDGCHC 1 cut(s) 672
SexAI ACCWGGT 1 cut(s) 654
SfaNI GCATC 4 cut(s) 607, 736, 904, 1405
SmiMI CAYNNNNRTG 2 cut(s) 631, 843
SmlI CTYRAG 2 cut(s) 347, 1469
SmoI CTYRAG 2 cut(s) 347, 1469
Sse9I AATT 2 cut(s) 1455, 1476
SsiI CCGC 5 cut(s) 193, 243, 1048, 1241, 1412
SspMI CTAG 5 cut(s) 302, 441, 1145, 1160, 1483
SstI GAGCTC 1 cut(s) 672
StyD4I CCNGG 4 cut(s) 654, 810, 1108, 1421
StyI CCWWGG 6 cut(s) 341, 558, 585, 713, 733, 1254
TaaI ACNGT 3 cut(s) 311, 1070, 1358
TaqI TCGA 3 cut(s) 217, 565, 939
TasI AATT 2 cut(s) 1455, 1476
TatI WGTACW 4 cut(s) 635, 888, 1135, 1314
TfiI GAWTC 4 cut(s) 205, 257, 953, 1148
Tru1I TTAA 6 cut(s) 80, 348, 465, 686, 699, 1470
Tru9I TTAA 6 cut(s) 80, 348, 465, 686, 699, 1470
TscAI CASTG 6 cut(s) 316, 388, 792, 972, 1203, 1311
TseFI GTSAC 2 cut(s) 787, 1300
TseI GCWGC 5 cut(s) 195, 198, 599, 1130, 1418
Tsp45I GTSAC 2 cut(s) 787, 1300
TspDTI ATGAA 7 cut(s) 487, 546, 672, 1097, 1116, 1255, 1466
TspGWI ACGGA 1 cut(s) 47
TspRI CASTG 6 cut(s) 316, 388, 792, 972, 1203, 1311
Vha464I CTTAAG 2 cut(s) 347, 1469
XbaI TCTAGA 1 cut(s) 1159
XcmI CCANNNNNNNNNTGG 1 cut(s) 720
XmiI GTMKAC 1 cut(s) 1218
XmnI GAANNNNTTC 1 cut(s) 494
XspI CTAG 5 cut(s) 302, 441, 1145, 1160, 1483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.