RLG00000004524

Argininosuccinate synthase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
60018536 .. 60021767
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004524

Sequence Viewer

Length: 1332 bp
ATGGCTCAGTTGAACACCACGTCCGCTTGCTTGCCCACCAACTTCGCCTTTCACTCTCCAAAATCAGCACTGCCTAGTTACAGTGAGACTGAAGTAGCTGGATCTACAAAGGACAGAGGATTACGTGGCAAATTGAACAAGGTTGTTCTGGCCTATAGTGGTGGCTTAGACACGTCAGTCATTGTCCCATGGCTAAGGGAGAACTACGGTTGTGAAGTTGTTTGCTTCACTGCCGACGTGGGTCAAGGTATAAAAGAATTGGATGGTCTGGAACAGAAGGCAAAGGCGAGTGGGGCTTGTCAGTTAGTAGTGAAGGATCTGAAGGAGGAGTTTGTAAAAGACTATGTATTCCCTTGCTTGCGAGCTGGTGCAATCTATGAGAGGAAATACTTGCTGGGGACCTCAATGGCCCGTCCTGTTATTGCTAAGGCCATGGTAGATGTTGCCAAAGAAGTTGGAGCTGATGCCGTCGCTCATGGATGCACAGGGAAAGGAAATGATCAGGTTCGGTTTGAGCTGACATTTTTTGCTCTCGACCCCAAACTTAATGTGGTGGCTCCTTGGAGGGAATGGGACATTACGGGTAGAGAAGATGCTATTGAATATGCTAAGAAGCATAATGTGCCTGTCCCGGTGACAAAGAAATCCATATACAGCAGAGATGGGAACTTATGGCACCTTAGTCATGAGGGTGATATTTTGGAAGACCCGGAAAATGAGCCGAAGAAGGATATGTTCATGTTATCTGTCGATCCAGAAGATGCACCGAATGAACCTGAGTATGTAGATATCGGGATCGTTTCAGGAATTCCAGTTTCAGTCGATGGACAAGAGCTTTCACCAGCTTCTTTGCTTACGAAGCTTAATGAGATTGGCGGAAGACACGGAATTGGTCGTATTGACATGGTTGAAAACCGTCTTGTTGGTATGAAGAGCCGTGGAGTCTATGAAACTCCTGGAGGCACCATCCTATTCGCTGCTGCACGAGAGTTGGAGTCCTTAACTTTGGATCGAGAAACAATGCAAGTTAAAGACTCGCTTGCCCTGAAATATGCAGAGCTAGTCTATGCAGGCAGGTGGTTCGACCCACTTCGTGAGTCCATGGATGCATTCATGGAGAAAATCTCGGAGACAACAACGGGATCAGTAACTCTAAAGTTGTACAAGGGTTCGATCAGTGTAACTAGCCGTAAGAGTCCATATAGCCTGTATAGGCAAGACATCTCTTCATTTGAGAGCGGAGATGTGTATGATCAAGCCGATGCAGCTGGGTTTATTAGGCTATATGGTCTCCCCATGAGGGTGCGGGCAATGCTCAAGGAGGGGATCTAG

Protein Analysis

444

Amino Acids

48.78

Weight (kDa)

5.35

Isoelectric Point (pI)

30.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arginosuc_synth PF00764 47 - 209 4.8e-69 Arginosuccinate synthase N-terminal HUP domain
Arginosuc_syn_C PF20979 218 - 435 5.2e-82 Arginosuccinate synthase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1065
AasI GACNNNNNNGTC 1 cut(s) 176
Acc36I ACCTGC 1 cut(s) 1065
AccB1I GGYRCC 2 cut(s) 675, 962
AccBSI CCGCTC 1 cut(s) 1239
AciI CCGC 4 cut(s) 24, 876, 1239, 1306
AclWI GGATC 6 cut(s) 109, 324, 746, 803, 1017, 1150
AcsI RAATTY 1 cut(s) 807
AcuI CTGAAG 2 cut(s) 111, 341
AdeI CACNNNGTG 1 cut(s) 1094
AfaI GTAC 1 cut(s) 1163
AfiI CCNNNNNNNGG 1 cut(s) 1300
AflIII ACRYGT 1 cut(s) 171
AgsI TTSAA 4 cut(s) 13, 136, 602, 911
AjiI CACGTC 3 cut(s) 21, 174, 238
AjnI CCWGG 1 cut(s) 955
AloI GAACNNNNNNTCC 1 cut(s) 37
AluBI AGCT 9 cut(s) 98, 365, 461, 517, 835, 845, 862, 1060, 1268
AluI AGCT 9 cut(s) 98, 365, 461, 517, 835, 845, 862, 1060, 1268
Alw26I GTCTC 3 cut(s) 80, 1124, 1295
AlwI GGATC 6 cut(s) 109, 324, 746, 803, 1017, 1150
AoxI GGCC 3 cut(s) 150, 408, 429
ApeKI GCWGC 3 cut(s) 977, 980, 1265
ApoI RAATTY 1 cut(s) 807
AspS9I GGNCC 2 cut(s) 399, 409
AsuC2I CCSGG 2 cut(s) 632, 710
AsuHPI GGTGA 3 cut(s) 646, 704, 831
AvaII GGWCC 1 cut(s) 399
BanI GGYRCC 2 cut(s) 675, 962
BauI CACGAG 1 cut(s) 984
BbsI GAAGAC 2 cut(s) 711, 886
BbvI GCAGC 3 cut(s) 964, 967, 1277
BccI CCATC 4 cut(s) 257, 656, 818, 974
BceAI ACGGC 3 cut(s) 452, 921, 1173
BcgI CGANNNNNNTGC 2 cut(s) 1063, 1097
BciT130I CCWGG 1 cut(s) 957
BclI TGATCA 2 cut(s) 499, 1252
BcnI CCSGG 2 cut(s) 632, 710
BcoDI GTCTC 3 cut(s) 80, 1124, 1295
BfaI CTAG 4 cut(s) 75, 1061, 1185, 1330
BfmI CTRYAG 1 cut(s) 154
BfuAI ACCTGC 1 cut(s) 1065
BisI GCNGC 3 cut(s) 978, 981, 1266
BlsI GCNGC 3 cut(s) 979, 982, 1267
Bme1390I CCNGG 3 cut(s) 632, 710, 957
Bme18I GGWCC 1 cut(s) 399
BmgBI CACGTC 3 cut(s) 21, 174, 238
BmgT120I GGNCC 2 cut(s) 399, 409
BmiI GGNNCC 4 cut(s) 400, 558, 677, 964
BmrFI CCNGG 3 cut(s) 632, 710, 957
BmsI GCATC 6 cut(s) 454, 470, 583, 751, 1096, 1252
BoxI GACNNNNGTC 1 cut(s) 240
BpiI GAAGAC 2 cut(s) 711, 886
BplI GAGNNNNNCTC 2 cut(s) 1109, 1141
BpmI CTGGAG 1 cut(s) 978
Bpu10I CCTNAGC 2 cut(s) 194, 426
BpuEI CTTGAG 1 cut(s) 1301
BpuMI CCSGG 2 cut(s) 632, 710
BsaAI YACGTR 1 cut(s) 125
BsaI GGTCTC 1 cut(s) 1295
BsaJI CCNNGG 5 cut(s) 188, 432, 560, 937, 1101
Bsc4I CCNNNNNNNGG 1 cut(s) 1300
Bse1I ACTGG 1 cut(s) 812
Bse3DI GCAATG 1 cut(s) 1317
BseBI CCWGG 1 cut(s) 957
BseDI CCNNGG 5 cut(s) 188, 432, 560, 937, 1101
BseGI GGATG 4 cut(s) 268, 485, 966, 1111
BseLI CCNNNNNNNGG 1 cut(s) 1300
BseMI GCAATG 1 cut(s) 1317
BseMII CTCAG 2 cut(s) 20, 768
BseNI ACTGG 1 cut(s) 812
BseRI GAGGAG 1 cut(s) 341
BseXI GCAGC 3 cut(s) 964, 967, 1277
BseYI CCCAGC 2 cut(s) 394, 1268
BsgI GTGCAG 1 cut(s) 966
BshFI GGCC 3 cut(s) 152, 410, 431
BshNI GGYRCC 2 cut(s) 675, 962
BsiSI CCGG 2 cut(s) 632, 710
BslFI GGGAC 4 cut(s) 170, 412, 587, 614
BslI CCNNNNNNNGG 1 cut(s) 1300
BsmAI GTCTC 3 cut(s) 80, 1124, 1295
BsmFI GGGAC 4 cut(s) 170, 412, 587, 614
BsmI GAATGC 1 cut(s) 1109
BsnI GGCC 3 cut(s) 152, 410, 431
Bso31I GGTCTC 1 cut(s) 1295
Bsp1407I TGTACA 1 cut(s) 1161
Bsp19I CCATGG 3 cut(s) 188, 432, 1101
BspACI CCGC 4 cut(s) 24, 876, 1239, 1306
BspANI GGCC 3 cut(s) 152, 410, 431
BspCNI CTCAG 2 cut(s) 19, 769
BspHI TCATGA 1 cut(s) 685
BspLI GGNNCC 4 cut(s) 400, 558, 677, 964
BspMI ACCTGC 1 cut(s) 1065
BspPI GGATC 6 cut(s) 109, 324, 746, 803, 1017, 1150
BspQI GCTCTTC 1 cut(s) 926
BspT107I GGYRCC 2 cut(s) 675, 962
BspTNI GGTCTC 1 cut(s) 1295
BsrBI CCGCTC 1 cut(s) 1239
BsrDI GCAATG 1 cut(s) 1317
BsrGI TGTACA 1 cut(s) 1161
BsrI ACTGG 1 cut(s) 812
BssECI CCNNGG 5 cut(s) 188, 432, 560, 937, 1101
BssSI CACGAG 1 cut(s) 984
BssT1I CCWWGG 4 cut(s) 188, 432, 560, 1101
Bst2BI CACGAG 1 cut(s) 984
Bst2UI CCWGG 1 cut(s) 957
Bst4CI ACNGT 3 cut(s) 83, 209, 917
Bst6I CTCTTC 2 cut(s) 926, 1231
BstAPI GCANNNNNTGC 1 cut(s) 622
BstAUI TGTACA 1 cut(s) 1161
BstBAI YACGTR 1 cut(s) 125
BstC8I GCNNGC 7 cut(s) 28, 32, 359, 363, 1041, 1072, 1308
BstDEI CTNAG 7 cut(s) 6, 166, 194, 426, 609, 680, 777
BstDSI CCRYGG 4 cut(s) 188, 432, 937, 1101
BstF5I GGATG 4 cut(s) 268, 485, 966, 1111
BstMAI GTCTC 3 cut(s) 80, 1124, 1295
BstMWI GCNNNNNNNGC 5 cut(s) 293, 622, 859, 1265, 1312
BstNI CCWGG 1 cut(s) 957
BstPAI GACNNNNGTC 1 cut(s) 240
BstSCI CCNGG 3 cut(s) 630, 708, 955
BstSFI CTRYAG 1 cut(s) 154
BstV1I GCAGC 3 cut(s) 964, 967, 1277
BstV2I GAAGAC 2 cut(s) 711, 886
BstX2I RGATCY 3 cut(s) 101, 316, 1326
BstYI RGATCY 3 cut(s) 101, 316, 1326
BsuRI GGCC 3 cut(s) 152, 410, 431
BtgI CCRYGG 4 cut(s) 188, 432, 937, 1101
BtrI CACGTC 3 cut(s) 21, 174, 238
BtsCI GGATG 4 cut(s) 268, 485, 966, 1111
BtsI GCAGTG 2 cut(s) 68, 228
BtsIMutI CAGTG 4 cut(s) 68, 88, 228, 1183
BveI ACCTGC 1 cut(s) 1065
Cac8I GCNNGC 7 cut(s) 28, 32, 359, 363, 1041, 1072, 1308
CciI TCATGA 1 cut(s) 685
Cfr13I GGNCC 2 cut(s) 399, 409
Csp6I GTAC 1 cut(s) 1162
CviAII CATG 9 cut(s) 189, 433, 476, 686, 739, 904, 1102, 1114, 1297
CviQI GTAC 1 cut(s) 1162
DdeI CTNAG 7 cut(s) 6, 166, 194, 426, 609, 680, 777
DraIII CACNNNGTG 1 cut(s) 1094
DrdI GACNNNNNNGTC 1 cut(s) 176
DseDI GACNNNNNNGTC 1 cut(s) 176
Eam1104I CTCTTC 2 cut(s) 926, 1231
EarI CTCTTC 2 cut(s) 926, 1231
EciI GGCGGA 1 cut(s) 891
Eco130I CCWWGG 4 cut(s) 188, 432, 560, 1101
Eco31I GGTCTC 1 cut(s) 1295
Eco32I GATATC 1 cut(s) 790
Eco47I GGWCC 1 cut(s) 399
Eco57I CTGAAG 2 cut(s) 111, 341
EcoO109I RGGNCCY 1 cut(s) 399
EcoRI GAATTC 1 cut(s) 807
EcoRII CCWGG 1 cut(s) 955
EcoRV GATATC 1 cut(s) 790
EcoT14I CCWWGG 4 cut(s) 188, 432, 560, 1101
EcoT22I ATGCAT 1 cut(s) 1111
ErhI CCWWGG 4 cut(s) 188, 432, 560, 1101
FaeI CATG 9 cut(s) 192, 436, 479, 689, 742, 907, 1105, 1117, 1300
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FaqI GGGAC 4 cut(s) 170, 412, 587, 614
FatI CATG 9 cut(s) 188, 432, 475, 685, 738, 903, 1101, 1113, 1296
FauI CCCGC 1 cut(s) 1299
FbaI TGATCA 2 cut(s) 499, 1252
Fnu4HI GCNGC 3 cut(s) 978, 981, 1266
FokI GGATG 4 cut(s) 275, 492, 953, 1118
Fsp4HI GCNGC 3 cut(s) 978, 981, 1266
FspBI CTAG 4 cut(s) 75, 1061, 1185, 1330
GluI GCNGC 3 cut(s) 978, 981, 1266
GsaI CCCAGC 2 cut(s) 398, 1272
GsuI CTGGAG 1 cut(s) 978
HaeIII GGCC 3 cut(s) 152, 410, 431
HapII CCGG 2 cut(s) 632, 710
Hin1II CATG 9 cut(s) 192, 436, 479, 689, 742, 907, 1105, 1117, 1300
HindIII AAGCTT 1 cut(s) 860
HinfI GANTC 5 cut(s) 942, 995, 1034, 1097, 1195
HpaII CCGG 2 cut(s) 632, 710
HphI GGTGA 3 cut(s) 646, 704, 831
Hpy188I TCNGA 2 cut(s) 321, 1129
Hpy188III TCNNGA 8 cut(s) 269, 533, 686, 755, 793, 804, 1013, 1094
Hpy99I CGWCG 2 cut(s) 239, 473
HpyAV CCTTC 4 cut(s) 271, 307, 316, 721
HpyCH4III ACNGT 3 cut(s) 83, 209, 917
HpyCH4IV ACGT 4 cut(s) 20, 124, 173, 237
HpyCH4V TGCA 9 cut(s) 371, 483, 764, 983, 1024, 1055, 1070, 1109, 1265
HpyF10VI GCNNNNNNNGC 5 cut(s) 293, 622, 859, 1265, 1312
HpyF3I CTNAG 7 cut(s) 6, 166, 194, 426, 609, 680, 777
HpySE526I ACGT 4 cut(s) 20, 124, 173, 237
Hsp92II CATG 9 cut(s) 192, 436, 479, 689, 742, 907, 1105, 1117, 1300
Ksp22I TGATCA 2 cut(s) 499, 1252
LguI GCTCTTC 1 cut(s) 926
LmnI GCTCC 2 cut(s) 458, 562
Lsp1109I GCAGC 3 cut(s) 964, 967, 1277
LweI GCATC 6 cut(s) 454, 470, 583, 751, 1096, 1252
MaeI CTAG 4 cut(s) 75, 1061, 1185, 1330
MaeII ACGT 4 cut(s) 20, 124, 173, 237
MaeIII GTNAC 4 cut(s) 77, 634, 1147, 1180
MbiI CCGCTC 1 cut(s) 1239
MboII GAAGA 7 cut(s) 602, 716, 736, 770, 891, 943, 1218
MflI RGATCY 3 cut(s) 101, 316, 1326
MluCI AATT 4 cut(s) 131, 257, 807, 888
MlyI GAGTC 5 cut(s) 951, 1004, 1028, 1106, 1204
MmeI TCCRAC 2 cut(s) 436, 972
MnlI CCTC 9 cut(s) 110, 319, 375, 412, 558, 682, 953, 1293, 1315
Mph1103I ATGCAT 1 cut(s) 1111
MseI TTAA 4 cut(s) 546, 864, 1001, 1029
MslI CAYNNNNRTG 2 cut(s) 690, 1301
MspA1I CMGCKG 1 cut(s) 1268
MspI CCGG 2 cut(s) 632, 710
MspR9I CCNGG 3 cut(s) 632, 710, 957
Mva1269I GAATGC 1 cut(s) 1109
MvaI CCWGG 1 cut(s) 957
MwoI GCNNNNNNNGC 5 cut(s) 293, 622, 859, 1265, 1312
NciI CCSGG 2 cut(s) 632, 710
NcoI CCATGG 3 cut(s) 188, 432, 1101
NlaIII CATG 9 cut(s) 192, 436, 479, 689, 742, 907, 1105, 1117, 1300
NlaIV GGNNCC 4 cut(s) 400, 558, 677, 964
NmuCI GTSAC 1 cut(s) 634
NsiI ATGCAT 1 cut(s) 1111
PagI TCATGA 1 cut(s) 685
PaqCI CACCTGC 1 cut(s) 1065
PciSI GCTCTTC 1 cut(s) 926
PctI GAATGC 1 cut(s) 1109
PfoI TCCNGGA 1 cut(s) 955
PkrI GCNGC 3 cut(s) 979, 982, 1267
PleI GAGTC 5 cut(s) 950, 1003, 1028, 1105, 1203
PpsI GAGTC 5 cut(s) 950, 1003, 1028, 1105, 1203
Ppu21I YACGTR 1 cut(s) 125
PpuMI RGGWCCY 1 cut(s) 399
PshAI GACNNNNGTC 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 399
Psp6I CCWGG 1 cut(s) 955
PspFI CCCAGC 2 cut(s) 394, 1268
PspGI CCWGG 1 cut(s) 955
PspN4I GGNNCC 4 cut(s) 400, 558, 677, 964
PspPI GGNCC 2 cut(s) 399, 409
PspPPI RGGWCCY 1 cut(s) 399
PsuI RGATCY 3 cut(s) 101, 316, 1326
PvuII CAGCTG 1 cut(s) 1268
RsaI GTAC 1 cut(s) 1163
RsaNI GTAC 1 cut(s) 1162
RseI CAYNNNNRTG 2 cut(s) 690, 1301
SapI GCTCTTC 1 cut(s) 926
SaqAI TTAA 4 cut(s) 546, 864, 1001, 1029
SatI GCNGC 3 cut(s) 978, 981, 1266
Sau96I GGNCC 2 cut(s) 399, 409
SchI GAGTC 5 cut(s) 951, 1004, 1028, 1106, 1204
ScrFI CCNGG 3 cut(s) 632, 710, 957
SfaNI GCATC 6 cut(s) 454, 470, 583, 751, 1096, 1252
SfcI CTRYAG 1 cut(s) 154
SinI GGWCC 1 cut(s) 399
SmiMI CAYNNNNRTG 2 cut(s) 690, 1301
SmlI CTYRAG 1 cut(s) 1316
SmoI CTYRAG 1 cut(s) 1316
Sse9I AATT 4 cut(s) 131, 257, 807, 888
SsiI CCGC 4 cut(s) 24, 876, 1239, 1306
SspMI CTAG 4 cut(s) 75, 1061, 1185, 1330
StyD4I CCNGG 3 cut(s) 630, 708, 955
StyI CCWWGG 4 cut(s) 188, 432, 560, 1101
TaaI ACNGT 3 cut(s) 83, 209, 917
TaiI ACGT 4 cut(s) 23, 127, 176, 240
TaqI TCGA 6 cut(s) 534, 750, 822, 1012, 1083, 1172
TasI AATT 4 cut(s) 131, 257, 807, 888
TatI WGTACW 1 cut(s) 1161
Tru1I TTAA 4 cut(s) 546, 864, 1001, 1029
Tru9I TTAA 4 cut(s) 546, 864, 1001, 1029
TscAI CASTG 4 cut(s) 75, 88, 235, 1183
TseFI GTSAC 1 cut(s) 634
TseI GCWGC 3 cut(s) 977, 980, 1265
Tsp45I GTSAC 1 cut(s) 634
TspDTI ATGAA 6 cut(s) 727, 786, 944, 963, 1102, 1218
TspGWI ACGGA 1 cut(s) 900
TspRI CASTG 4 cut(s) 75, 88, 235, 1183
VpaK11BI GGWCC 1 cut(s) 399
XapI RAATTY 1 cut(s) 807
XcmI CCANNNNNNNNNTGG 1 cut(s) 547
XspI CTAG 4 cut(s) 75, 1061, 1185, 1330
Zsp2I ATGCAT 1 cut(s) 1111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.