Rh7BG113800

Argininosuccinate synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
8534769 .. 8537971
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG113800.1

Sequence Viewer

Length: 1311 bp
ATGGCACAGTTGAACACCAACATCGCCTTTCACGCTCCAAAATCAGCACTGCCCAGTTACAGTGAGACTGAAGTAGCTGGATCTACAAAGGAAAGAGGATTACGTGGCAAATTGAACAAGGTTGTTCTGGCCTATAGTGGTGGCTTAGACACGTCAGTCATTGTCCCATGGCTAAGGGAGAACTATGGTTGTGAAGTTGTTTGCTTCACTGCCGACGTGGGTCAAGGTATAAAAGAATTGGATGGTCTGGAACAGAAGGCCAAGGCAAGTGGGGCTTGTCAGTTAGTAGTGAAGGATCTGAAGGAGGAGTTTGTAAAAGACTATGTATTCCCTTGCTTGCGAGCTGGTGCAATCTATGAGAGGAAATACTTGCTTGGGACCTCAATGGCCCGTCCTGTTATTGCTAAGGCCATGGTAGATGTTGCCAAAGCAGTTGGAGCTGATGCCGTCGCTCATGGATGCACAGGGAAAGGAAATGATCAGGTTCGGTTTGAGCTGACATTTTTTGCTCTCGACCCCAAACTTAATGTGGTGGCTCCTTGGAGGGAATGGGACATTACGGGTAGAGAAGATGCTATTGAATATGCTAAGAAGCATAATGTGCCTGTCCCAGTGACAAAGAAATCCATATACAGCAGAGATGGGAACTTATGGCACCTTAGTCATGAGGGTGATATTTTGGAAGACCCGGAAAATGAGCCGAAGAAGGATATGTTCATGTTATCTGTTGATCCAGAAGATGCACCGAATGAACCTGAGTATGTAGATATCGGGATCGTTTCAGGAATTCCAGTTTCAGTCGATGGACAAGAGCTTTCACCAGCTTCTTTGCTTACGAAGCTTAATGAGATTGGCGGAAGACACGGAATTGGTCGTATTGACATGGTTGAAAACCGTCTTGTTGGTATGAAGAGCCGTGGAGTCTATGAAACTCCTGGAGGCACCATCCTATTCGCTGCTGCACGAGAGTTGGAGTCCTTAACTTTGGATCGAGAAACAATGCAAGTTAAAGACTCGCTTGCCCTCAAATATGCAGAGCTAGTCTATGCAGGCAGGTGGTTCGACCCACTTCGTGAGTCCATGGATGCATTCATGGAGAAAATCTCGGAGACAACAACGGGATCAGTAACTCTAAAGTTGTACAAGGGTTCGATCACTGTAACTAGCCGTAAGAGTCCATATAGCCTGTATAGGCAAGACATCTCTTCATTTGAGAGCGGAGATGTGTATGATCAAGCCGATGCAGCTGGGTTTATTAGGCTATATGGTCTCCCCATGAGGGTGCGGGCAATGCTTAAGGAGGGGATCTAG

Protein Analysis

436

Amino Acids

48.02

Weight (kDa)

5.43

Isoelectric Point (pI)

30.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Arginosuc_synth PF00764 40 - 202 1.1e-68 Arginosuccinate synthase N-terminal HUP domain
Arginosuc_syn_C PF20979 211 - 428 2.9e-82 Arginosuccinate synthase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1044
AasI GACNNNNNNGTC 1 cut(s) 155
Acc36I ACCTGC 1 cut(s) 1044
AccB1I GGYRCC 2 cut(s) 654, 941
AccBSI CCGCTC 1 cut(s) 1218
AciI CCGC 3 cut(s) 855, 1218, 1285
AclWI GGATC 6 cut(s) 88, 303, 725, 782, 996, 1129
AcsI RAATTY 1 cut(s) 786
AcuI CTGAAG 2 cut(s) 90, 320
AdeI CACNNNGTG 1 cut(s) 1073
AfaI GTAC 1 cut(s) 1142
AfiI CCNNNNNNNGG 1 cut(s) 1279
AflII CTTAAG 1 cut(s) 1295
AflIII ACRYGT 1 cut(s) 150
AgsI TTSAA 4 cut(s) 13, 115, 581, 890
AjiI CACGTC 2 cut(s) 153, 217
AjnI CCWGG 1 cut(s) 934
AluBI AGCT 9 cut(s) 77, 344, 440, 496, 814, 824, 841, 1039, 1247
AluI AGCT 9 cut(s) 77, 344, 440, 496, 814, 824, 841, 1039, 1247
Alw26I GTCTC 3 cut(s) 59, 1103, 1274
AlwI GGATC 6 cut(s) 88, 303, 725, 782, 996, 1129
AoxI GGCC 4 cut(s) 129, 258, 387, 408
ApeKI GCWGC 3 cut(s) 956, 959, 1244
ApoI RAATTY 1 cut(s) 786
AspS9I GGNCC 2 cut(s) 378, 388
AsuC2I CCSGG 1 cut(s) 689
AsuHPI GGTGA 2 cut(s) 683, 810
AvaII GGWCC 1 cut(s) 378
BanI GGYRCC 2 cut(s) 654, 941
BauI CACGAG 1 cut(s) 963
BbsI GAAGAC 2 cut(s) 690, 865
BbvI GCAGC 3 cut(s) 943, 946, 1256
BccI CCATC 4 cut(s) 236, 635, 797, 953
BceAI ACGGC 3 cut(s) 431, 900, 1152
BcgI CGANNNNNNTGC 2 cut(s) 1042, 1076
BciT130I CCWGG 1 cut(s) 936
BclI TGATCA 2 cut(s) 478, 1231
BcnI CCSGG 1 cut(s) 689
BcoDI GTCTC 3 cut(s) 59, 1103, 1274
BfaI CTAG 3 cut(s) 1040, 1164, 1309
BfmI CTRYAG 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 1295
BfuAI ACCTGC 1 cut(s) 1044
BisI GCNGC 3 cut(s) 957, 960, 1245
BlsI GCNGC 3 cut(s) 958, 961, 1246
Bme1390I CCNGG 2 cut(s) 689, 936
Bme18I GGWCC 1 cut(s) 378
BmgBI CACGTC 2 cut(s) 153, 217
BmgT120I GGNCC 2 cut(s) 378, 388
BmiI GGNNCC 4 cut(s) 379, 537, 656, 943
BmrFI CCNGG 2 cut(s) 689, 936
BmrI ACTGGG 2 cut(s) 48, 605
BmsI GCATC 6 cut(s) 433, 449, 562, 730, 1075, 1231
BmuI ACTGGG 2 cut(s) 48, 605
BoxI GACNNNNGTC 1 cut(s) 219
BpiI GAAGAC 2 cut(s) 690, 865
BplI GAGNNNNNCTC 2 cut(s) 1088, 1120
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 2 cut(s) 173, 405
BpuMI CCSGG 1 cut(s) 689
BsaAI YACGTR 1 cut(s) 104
BsaI GGTCTC 1 cut(s) 1274
BsaJI CCNNGG 6 cut(s) 167, 261, 411, 539, 916, 1080
Bsc4I CCNNNNNNNGG 1 cut(s) 1279
Bse1I ACTGG 3 cut(s) 54, 611, 791
Bse3DI GCAATG 1 cut(s) 1296
BseBI CCWGG 1 cut(s) 936
BseDI CCNNGG 6 cut(s) 167, 261, 411, 539, 916, 1080
BseGI GGATG 4 cut(s) 247, 464, 945, 1090
BseLI CCNNNNNNNGG 1 cut(s) 1279
BseMI GCAATG 1 cut(s) 1296
BseMII CTCAG 1 cut(s) 747
BseNI ACTGG 3 cut(s) 54, 611, 791
BseRI GAGGAG 1 cut(s) 320
BseXI GCAGC 3 cut(s) 943, 946, 1256
BseYI CCCAGC 1 cut(s) 1247
BsgI GTGCAG 1 cut(s) 945
BshFI GGCC 4 cut(s) 131, 260, 389, 410
BshNI GGYRCC 2 cut(s) 654, 941
BsiSI CCGG 1 cut(s) 689
BslFI GGGAC 4 cut(s) 149, 391, 566, 593
BslI CCNNNNNNNGG 1 cut(s) 1279
BsmAI GTCTC 3 cut(s) 59, 1103, 1274
BsmFI GGGAC 4 cut(s) 149, 391, 566, 593
BsmI GAATGC 1 cut(s) 1088
BsnI GGCC 4 cut(s) 131, 260, 389, 410
Bso31I GGTCTC 1 cut(s) 1274
Bsp1407I TGTACA 1 cut(s) 1140
Bsp19I CCATGG 3 cut(s) 167, 411, 1080
BspACI CCGC 3 cut(s) 855, 1218, 1285
BspANI GGCC 4 cut(s) 131, 260, 389, 410
BspCNI CTCAG 1 cut(s) 748
BspHI TCATGA 1 cut(s) 664
BspLI GGNNCC 4 cut(s) 379, 537, 656, 943
BspMI ACCTGC 1 cut(s) 1044
BspPI GGATC 6 cut(s) 88, 303, 725, 782, 996, 1129
BspQI GCTCTTC 1 cut(s) 905
BspT107I GGYRCC 2 cut(s) 654, 941
BspTI CTTAAG 1 cut(s) 1295
BspTNI GGTCTC 1 cut(s) 1274
BsrBI CCGCTC 1 cut(s) 1218
BsrDI GCAATG 1 cut(s) 1296
BsrGI TGTACA 1 cut(s) 1140
BsrI ACTGG 3 cut(s) 54, 611, 791
BssECI CCNNGG 6 cut(s) 167, 261, 411, 539, 916, 1080
BssSI CACGAG 1 cut(s) 963
BssT1I CCWWGG 5 cut(s) 167, 261, 411, 539, 1080
Bst2BI CACGAG 1 cut(s) 963
Bst2UI CCWGG 1 cut(s) 936
Bst4CI ACNGT 4 cut(s) 9, 62, 896, 1159
Bst6I CTCTTC 2 cut(s) 905, 1210
BstAFI CTTAAG 1 cut(s) 1295
BstAPI GCANNNNNTGC 1 cut(s) 601
BstAUI TGTACA 1 cut(s) 1140
BstBAI YACGTR 1 cut(s) 104
BstC8I GCNNGC 5 cut(s) 338, 342, 1020, 1051, 1287
BstDEI CTNAG 6 cut(s) 145, 173, 405, 588, 659, 756
BstDSI CCRYGG 4 cut(s) 167, 411, 916, 1080
BstF5I GGATG 4 cut(s) 247, 464, 945, 1090
BstMAI GTCTC 3 cut(s) 59, 1103, 1274
BstMWI GCNNNNNNNGC 7 cut(s) 32, 272, 437, 601, 838, 1244, 1291
BstNI CCWGG 1 cut(s) 936
BstPAI GACNNNNGTC 1 cut(s) 219
BstSCI CCNGG 2 cut(s) 687, 934
BstSFI CTRYAG 1 cut(s) 133
BstV1I GCAGC 3 cut(s) 943, 946, 1256
BstV2I GAAGAC 2 cut(s) 690, 865
BstX2I RGATCY 3 cut(s) 80, 295, 1305
BstYI RGATCY 3 cut(s) 80, 295, 1305
BsuRI GGCC 4 cut(s) 131, 260, 389, 410
BtgI CCRYGG 4 cut(s) 167, 411, 916, 1080
BtgZI GCGATG 1 cut(s) 7
BtrI CACGTC 2 cut(s) 153, 217
BtsCI GGATG 4 cut(s) 247, 464, 945, 1090
BtsI GCAGTG 2 cut(s) 47, 207
BtsIMutI CAGTG 5 cut(s) 47, 67, 207, 618, 1155
BveI ACCTGC 1 cut(s) 1044
Cac8I GCNNGC 5 cut(s) 338, 342, 1020, 1051, 1287
CciI TCATGA 1 cut(s) 664
Cfr13I GGNCC 2 cut(s) 378, 388
Csp6I GTAC 1 cut(s) 1141
CspCI CAANNNNNGTGG 2 cut(s) 250, 285
CviAII CATG 9 cut(s) 168, 412, 455, 665, 718, 883, 1081, 1093, 1276
CviQI GTAC 1 cut(s) 1141
DdeI CTNAG 6 cut(s) 145, 173, 405, 588, 659, 756
DraIII CACNNNGTG 1 cut(s) 1073
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
Eam1104I CTCTTC 2 cut(s) 905, 1210
EarI CTCTTC 2 cut(s) 905, 1210
EciI GGCGGA 1 cut(s) 870
Eco130I CCWWGG 5 cut(s) 167, 261, 411, 539, 1080
Eco31I GGTCTC 1 cut(s) 1274
Eco32I GATATC 1 cut(s) 769
Eco47I GGWCC 1 cut(s) 378
Eco57I CTGAAG 2 cut(s) 90, 320
EcoO109I RGGNCCY 1 cut(s) 378
EcoRI GAATTC 1 cut(s) 786
EcoRII CCWGG 1 cut(s) 934
EcoRV GATATC 1 cut(s) 769
EcoT14I CCWWGG 5 cut(s) 167, 261, 411, 539, 1080
EcoT22I ATGCAT 1 cut(s) 1090
ErhI CCWWGG 5 cut(s) 167, 261, 411, 539, 1080
FaeI CATG 9 cut(s) 171, 415, 458, 668, 721, 886, 1084, 1096, 1279
FalI AAGNNNNNCTT 4 cut(s) 259, 291, 1002, 1034
FaqI GGGAC 4 cut(s) 149, 391, 566, 593
FatI CATG 9 cut(s) 167, 411, 454, 664, 717, 882, 1080, 1092, 1275
FauI CCCGC 1 cut(s) 1278
FbaI TGATCA 2 cut(s) 478, 1231
Fnu4HI GCNGC 3 cut(s) 957, 960, 1245
FokI GGATG 4 cut(s) 254, 471, 932, 1097
Fsp4HI GCNGC 3 cut(s) 957, 960, 1245
FspBI CTAG 3 cut(s) 1040, 1164, 1309
GluI GCNGC 3 cut(s) 957, 960, 1245
GsaI CCCAGC 1 cut(s) 1251
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 4 cut(s) 131, 260, 389, 410
HapII CCGG 1 cut(s) 689
Hin1II CATG 9 cut(s) 171, 415, 458, 668, 721, 886, 1084, 1096, 1279
HindIII AAGCTT 1 cut(s) 839
HinfI GANTC 5 cut(s) 921, 974, 1013, 1076, 1174
HpaII CCGG 1 cut(s) 689
HphI GGTGA 2 cut(s) 683, 810
Hpy188I TCNGA 2 cut(s) 300, 1108
Hpy188III TCNNGA 8 cut(s) 248, 512, 665, 734, 772, 783, 992, 1073
Hpy99I CGWCG 2 cut(s) 218, 452
HpyAV CCTTC 4 cut(s) 250, 286, 295, 700
HpyCH4III ACNGT 4 cut(s) 9, 62, 896, 1159
HpyCH4IV ACGT 3 cut(s) 103, 152, 216
HpyCH4V TGCA 9 cut(s) 350, 462, 743, 962, 1003, 1034, 1049, 1088, 1244
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 272, 437, 601, 838, 1244, 1291
HpyF3I CTNAG 6 cut(s) 145, 173, 405, 588, 659, 756
HpySE526I ACGT 3 cut(s) 103, 152, 216
Hsp92II CATG 9 cut(s) 171, 415, 458, 668, 721, 886, 1084, 1096, 1279
Ksp22I TGATCA 2 cut(s) 478, 1231
LguI GCTCTTC 1 cut(s) 905
LmnI GCTCC 3 cut(s) 40, 437, 541
Lsp1109I GCAGC 3 cut(s) 943, 946, 1256
LweI GCATC 6 cut(s) 433, 449, 562, 730, 1075, 1231
MaeI CTAG 3 cut(s) 1040, 1164, 1309
MaeII ACGT 3 cut(s) 103, 152, 216
MaeIII GTNAC 4 cut(s) 56, 613, 1126, 1159
MbiI CCGCTC 1 cut(s) 1218
MboII GAAGA 7 cut(s) 581, 695, 715, 749, 870, 922, 1197
MflI RGATCY 3 cut(s) 80, 295, 1305
MluCI AATT 4 cut(s) 110, 236, 786, 867
MlyI GAGTC 5 cut(s) 930, 983, 1007, 1085, 1183
MmeI TCCRAC 2 cut(s) 415, 951
Mph1103I ATGCAT 1 cut(s) 1090
MseI TTAA 5 cut(s) 525, 843, 980, 1008, 1296
MslI CAYNNNNRTG 2 cut(s) 669, 1280
MspA1I CMGCKG 1 cut(s) 1247
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 1 cut(s) 689
MspR9I CCNGG 2 cut(s) 689, 936
Mva1269I GAATGC 1 cut(s) 1088
MvaI CCWGG 1 cut(s) 936
MwoI GCNNNNNNNGC 7 cut(s) 32, 272, 437, 601, 838, 1244, 1291
NciI CCSGG 1 cut(s) 689
NcoI CCATGG 3 cut(s) 167, 411, 1080
NlaIII CATG 9 cut(s) 171, 415, 458, 668, 721, 886, 1084, 1096, 1279
NlaIV GGNNCC 4 cut(s) 379, 537, 656, 943
NmuCI GTSAC 1 cut(s) 613
NsiI ATGCAT 1 cut(s) 1090
PagI TCATGA 1 cut(s) 664
PaqCI CACCTGC 1 cut(s) 1044
PciSI GCTCTTC 1 cut(s) 905
PctI GAATGC 1 cut(s) 1088
PfoI TCCNGGA 1 cut(s) 934
PkrI GCNGC 3 cut(s) 958, 961, 1246
PleI GAGTC 5 cut(s) 929, 982, 1007, 1084, 1182
PpsI GAGTC 5 cut(s) 929, 982, 1007, 1084, 1182
Ppu21I YACGTR 1 cut(s) 104
PpuMI RGGWCCY 1 cut(s) 378
PshAI GACNNNNGTC 1 cut(s) 219
Psp5II RGGWCCY 1 cut(s) 378
Psp6I CCWGG 1 cut(s) 934
PspFI CCCAGC 1 cut(s) 1247
PspGI CCWGG 1 cut(s) 934
PspN4I GGNNCC 4 cut(s) 379, 537, 656, 943
PspPI GGNCC 2 cut(s) 378, 388
PspPPI RGGWCCY 1 cut(s) 378
PsuI RGATCY 3 cut(s) 80, 295, 1305
PvuII CAGCTG 1 cut(s) 1247
RsaI GTAC 1 cut(s) 1142
RsaNI GTAC 1 cut(s) 1141
RseI CAYNNNNRTG 2 cut(s) 669, 1280
SapI GCTCTTC 1 cut(s) 905
SaqAI TTAA 5 cut(s) 525, 843, 980, 1008, 1296
SatI GCNGC 3 cut(s) 957, 960, 1245
Sau96I GGNCC 2 cut(s) 378, 388
SchI GAGTC 5 cut(s) 930, 983, 1007, 1085, 1183
ScrFI CCNGG 2 cut(s) 689, 936
SfaNI GCATC 6 cut(s) 433, 449, 562, 730, 1075, 1231
SfcI CTRYAG 1 cut(s) 133
SinI GGWCC 1 cut(s) 378
SmiMI CAYNNNNRTG 2 cut(s) 669, 1280
SmlI CTYRAG 1 cut(s) 1295
SmoI CTYRAG 1 cut(s) 1295
Sse9I AATT 4 cut(s) 110, 236, 786, 867
SsiI CCGC 3 cut(s) 855, 1218, 1285
SspMI CTAG 3 cut(s) 1040, 1164, 1309
StyD4I CCNGG 2 cut(s) 687, 934
StyI CCWWGG 5 cut(s) 167, 261, 411, 539, 1080
TaaI ACNGT 4 cut(s) 9, 62, 896, 1159
TaiI ACGT 3 cut(s) 106, 155, 219
TaqI TCGA 5 cut(s) 513, 801, 991, 1062, 1151
TasI AATT 4 cut(s) 110, 236, 786, 867
TatI WGTACW 1 cut(s) 1140
Tru1I TTAA 5 cut(s) 525, 843, 980, 1008, 1296
Tru9I TTAA 5 cut(s) 525, 843, 980, 1008, 1296
TscAI CASTG 5 cut(s) 54, 67, 214, 618, 1162
TseFI GTSAC 1 cut(s) 613
TseI GCWGC 3 cut(s) 956, 959, 1244
Tsp45I GTSAC 1 cut(s) 613
TspDTI ATGAA 6 cut(s) 706, 765, 923, 942, 1081, 1197
TspGWI ACGGA 1 cut(s) 879
TspRI CASTG 5 cut(s) 54, 67, 214, 618, 1162
Vha464I CTTAAG 1 cut(s) 1295
VpaK11BI GGWCC 1 cut(s) 378
XapI RAATTY 1 cut(s) 786
XcmI CCANNNNNNNNNTGG 1 cut(s) 526
XspI CTAG 3 cut(s) 1040, 1164, 1309
Zsp2I ATGCAT 1 cut(s) 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.