AT4G26010

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006757
Physical Location & Seq
Forward (+)
13200414 .. 13202164
1751 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26010.1

Sequence Viewer

Length: 933 bp
ATGAGGTCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCCTTGCTCCTTCTGCTTTGGCGCAGCTCCGAACTGGGTTCTACAGCCGCTCATGCCCCCGTGCCGAATCTATCGTGGCTAGTGTTGTTGCCAACCGTTTCAGAAGTGACAAGTCCATTACTGCAGCATTTCTTCGTATGCAGTTTCATGATTGCTTTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGACCCAAGACCTGGAAGGCCATCAGAGAAAAGCACTGGACCAAATGCAAGCGTGAGAGGCTACGAGATCATTGATGAGGCTAAGAGACAGCTCGAGGCTGCATGTCCCCGAACTGTCTCATGCGCAGACATTGTAACTCTTGCCACAAGAGACTCGGTCGCATTAGCTGGTGGTCCAAGGTTCTCAGTACCAACAGGAAGACGTGATGGATTAAGGTCAAACCCCAATGATGTGAACTTACCCGGACCAACAATTCCGGTTAGCGCATCTATCCAATTGTTTGCAGCTCAAGGTATGAATACCAACGATATGGTTACACTTATTGGTGGTGGCCACAGCGTCGGTGTTGCACATTGCAGTCTCTTCCAGGACAGGCTTTCCGACCGTGCAATGGAACCCTCATTGAAGTCTAGCTTGAGGAGGAAATGCAGTTCCCCTAACGACCCAACAACGTTTTTGGACCAAAAGACTTCATTTACTGTGGATAACGCAATCTATGGAGAGATCCGAAGACAAAGAGGAATTCTAAGAATTGATCAAAACTTGGGTCTTGATAGATCAACCAGTGGGATTGTGTCTGGTTATGCATCAAGCAATACACTCTTCAGAAAGAGATTTGCCGAAGCATTGGTGAAAATGGGTACCATTAAGGTTCTTACCGGACGTTCTGGAGAGATCAGGAGAAACTGCAGAGTCTTCAACAACTGA

Protein Analysis

310

Amino Acids

33.81

Weight (kDa)

10.0

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 38 - 272 7.9e-78 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 349
Acc65I GGTACC 1 cut(s) 866
AccB1I GGYRCC 1 cut(s) 866
AccB7I CCANNNNNTGG 1 cut(s) 236
AccBSI CCGCTC 1 cut(s) 87
AciI CCGC 1 cut(s) 85
AclI AACGTT 1 cut(s) 677
AclWI GGATC 1 cut(s) 724
AcoI YGGCCR 1 cut(s) 556
AcsI RAATTY 1 cut(s) 747
AcuI CTGAAG 1 cut(s) 814
AfaI GTAC 2 cut(s) 414, 868
AfiI CCNNNNNNNGG 2 cut(s) 236, 616
AgsI TTSAA 2 cut(s) 631, 925
AjiI CACGTC 1 cut(s) 428
AjnI CCWGG 2 cut(s) 235, 591
AloI GAACNNNNNNTCC 2 cut(s) 640, 672
AluBI AGCT 6 cut(s) 17, 64, 316, 392, 512, 639
AluI AGCT 6 cut(s) 17, 64, 316, 392, 512, 639
Alw26I GTCTC 4 cut(s) 304, 346, 369, 590
AlwI GGATC 1 cut(s) 724
Ama87I CYCGRG 1 cut(s) 317
AoxI GGCC 2 cut(s) 242, 556
ApeKI GCWGC 4 cut(s) 61, 161, 323, 509
ApoI RAATTY 1 cut(s) 747
ArsI GACNNNNNNTTYG 2 cut(s) 757, 789
Asp718I GGTACC 1 cut(s) 866
AspLEI GCGC 3 cut(s) 61, 350, 491
AspS9I GGNCC 4 cut(s) 263, 398, 470, 685
AsuC2I CCSGG 1 cut(s) 468
AsuHPI GGTGA 1 cut(s) 868
AvaI CYCGRG 1 cut(s) 317
AvaII GGWCC 4 cut(s) 263, 398, 470, 685
BalI TGGCCA 1 cut(s) 558
BanI GGYRCC 1 cut(s) 866
BbsI GAAGAC 3 cut(s) 430, 742, 913
BbvI GCAGC 4 cut(s) 73, 173, 310, 521
BccI CCATC 2 cut(s) 253, 425
BciT130I CCWGG 2 cut(s) 237, 593
BclI TGATCA 1 cut(s) 760
BcnI CCSGG 1 cut(s) 468
BcoDI GTCTC 4 cut(s) 304, 346, 369, 590
BfaI CTAG 2 cut(s) 117, 636
BfmI CTRYAG 3 cut(s) 79, 159, 913
BisI GCNGC 5 cut(s) 62, 85, 162, 324, 510
BlsI GCNGC 5 cut(s) 63, 86, 163, 325, 511
Bme1390I CCNGG 3 cut(s) 237, 468, 593
Bme18I GGWCC 4 cut(s) 263, 398, 470, 685
BmeT110I CYCGRG 1 cut(s) 317
BmgBI CACGTC 1 cut(s) 428
BmgT120I GGNCC 4 cut(s) 263, 398, 470, 685
BmiI GGNNCC 2 cut(s) 621, 868
BmrFI CCNGG 3 cut(s) 237, 468, 593
BmrI ACTGGG 1 cut(s) 81
BmsI GCATC 3 cut(s) 199, 500, 821
BmuI ACTGGG 1 cut(s) 81
BpiI GAAGAC 3 cut(s) 430, 742, 913
BpmI CTGGAG 1 cut(s) 915
BpuEI CTTGAG 2 cut(s) 498, 661
BpuMI CCSGG 1 cut(s) 468
BsaJI CCNNGG 1 cut(s) 401
BsaWI WCCGGW 2 cut(s) 481, 884
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 616
Bse1I ACTGG 3 cut(s) 76, 265, 789
Bse3DI GCAATG 2 cut(s) 577, 621
BseBI CCWGG 2 cut(s) 237, 593
BseDI CCNNGG 1 cut(s) 401
BseLI CCNNNNNNNGG 2 cut(s) 236, 616
BseMI GCAATG 2 cut(s) 577, 621
BseMII CTCAG 1 cut(s) 423
BseNI ACTGG 3 cut(s) 76, 265, 789
BseRI GAGGAG 1 cut(s) 658
BseXI GCAGC 4 cut(s) 73, 173, 310, 521
Bsh1285I CGRYCG 2 cut(s) 384, 610
BshFI GGCC 2 cut(s) 244, 558
BshNI GGYRCC 1 cut(s) 866
BsiEI CGRYCG 2 cut(s) 384, 610
BsiHKCI CYCGRG 1 cut(s) 317
BsiSI CCGG 3 cut(s) 468, 482, 885
BslFI GGGAC 1 cut(s) 315
BslI CCNNNNNNNGG 2 cut(s) 236, 616
BsmAI GTCTC 4 cut(s) 304, 346, 369, 590
BsmFI GGGAC 1 cut(s) 315
BsnI GGCC 2 cut(s) 244, 558
BsoBI CYCGRG 1 cut(s) 317
Bsp143I GATC 6 cut(s) 222, 291, 729, 760, 782, 900
BspACI CCGC 1 cut(s) 85
BspANI GGCC 2 cut(s) 244, 558
BspCNI CTCAG 1 cut(s) 422
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 2 cut(s) 621, 868
BspMAI CTGCAG 2 cut(s) 163, 917
BspPI GGATC 1 cut(s) 724
BspT107I GGYRCC 1 cut(s) 866
BsrBI CCGCTC 1 cut(s) 87
BsrDI GCAATG 2 cut(s) 577, 621
BsrI ACTGG 3 cut(s) 76, 265, 789
BssECI CCNNGG 1 cut(s) 401
BssMI GATC 6 cut(s) 222, 291, 729, 760, 782, 900
BssT1I CCWWGG 1 cut(s) 401
Bst2UI CCWGG 2 cut(s) 237, 593
Bst4CI ACNGT 4 cut(s) 134, 340, 611, 706
Bst6I CTCTTC 2 cut(s) 593, 833
BstC8I GCNNGC 1 cut(s) 274
BstDEI CTNAG 3 cut(s) 306, 409, 752
BstHHI GCGC 3 cut(s) 61, 350, 491
BstKTI GATC 6 cut(s) 225, 294, 732, 763, 785, 903
BstMAI GTCTC 4 cut(s) 304, 346, 369, 590
BstMBI GATC 6 cut(s) 222, 291, 729, 760, 782, 900
BstMCI CGRYCG 2 cut(s) 384, 610
BstMWI GCNNNNNNNGC 3 cut(s) 50, 90, 282
BstNI CCWGG 2 cut(s) 237, 593
BstNSI RCATGY 1 cut(s) 330
BstSCI CCNGG 3 cut(s) 235, 466, 591
BstSFI CTRYAG 3 cut(s) 79, 159, 913
BstV1I GCAGC 4 cut(s) 73, 173, 310, 521
BstV2I GAAGAC 3 cut(s) 430, 742, 913
BstX2I RGATCY 1 cut(s) 729
BstXI CCANNNNNNTGG 1 cut(s) 535
BstYI RGATCY 1 cut(s) 729
BsuRI GGCC 2 cut(s) 244, 558
BtrI CACGTC 1 cut(s) 428
BtsIMutI CAGTG 2 cut(s) 258, 796
Cac8I GCNNGC 1 cut(s) 274
CciI TCATGA 1 cut(s) 184
CfoI GCGC 3 cut(s) 61, 350, 491
Cfr13I GGNCC 4 cut(s) 263, 398, 470, 685
CseI GACGC 1 cut(s) 553
Csp6I GTAC 2 cut(s) 413, 867
CviAII CATG 4 cut(s) 90, 185, 327, 345
CviQI GTAC 2 cut(s) 413, 867
DdeI CTNAG 3 cut(s) 306, 409, 752
DpnI GATC 6 cut(s) 224, 293, 731, 762, 784, 902
DpnII GATC 6 cut(s) 222, 291, 729, 760, 782, 900
EaeI YGGCCR 1 cut(s) 556
Eam1104I CTCTTC 2 cut(s) 593, 833
EarI CTCTTC 2 cut(s) 593, 833
Eco130I CCWWGG 1 cut(s) 401
Eco47I GGWCC 4 cut(s) 263, 398, 470, 685
Eco57I CTGAAG 1 cut(s) 814
Eco88I CYCGRG 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 747
EcoRII CCWGG 2 cut(s) 235, 591
EcoT14I CCWWGG 1 cut(s) 401
EcoT22I ATGCAT 1 cut(s) 814
ErhI CCWWGG 1 cut(s) 401
FaeI CATG 4 cut(s) 93, 188, 330, 348
FaiI YATR 9 cut(s) 91, 176, 186, 328, 346, 521, 536, 723, 810
FalI AAGNNNNNCTT 2 cut(s) 623, 655
FaqI GGGAC 1 cut(s) 315
FatI CATG 4 cut(s) 89, 184, 326, 344
FbaI TGATCA 1 cut(s) 760
Fnu4HI GCNGC 5 cut(s) 62, 85, 162, 324, 510
Fsp4HI GCNGC 5 cut(s) 62, 85, 162, 324, 510
FspBI CTAG 2 cut(s) 117, 636
FspI TGCGCA 1 cut(s) 349
GlaI GCGC 3 cut(s) 60, 349, 490
GluI GCNGC 5 cut(s) 62, 85, 162, 324, 510
GsuI CTGGAG 1 cut(s) 915
HaeIII GGCC 2 cut(s) 244, 558
HapII CCGG 3 cut(s) 468, 482, 885
HgaI GACGC 1 cut(s) 553
HhaI GCGC 3 cut(s) 61, 350, 491
Hin1II CATG 4 cut(s) 93, 188, 330, 348
Hin6I GCGC 3 cut(s) 59, 348, 489
HinP1I GCGC 3 cut(s) 59, 348, 489
HinfI GANTC 3 cut(s) 104, 377, 918
HpaII CCGG 3 cut(s) 468, 482, 885
HphI GGTGA 1 cut(s) 868
Hpy166II GTNNAC 1 cut(s) 460
Hpy188I TCNGA 6 cut(s) 68, 140, 250, 607, 734, 833
Hpy188III TCNNGA 5 cut(s) 185, 220, 776, 894, 904
Hpy8I GTNNAC 1 cut(s) 460
Hpy99I CGWCG 1 cut(s) 569
HpyAV CCTTC 2 cut(s) 57, 234
HpyCH4III ACNGT 4 cut(s) 134, 340, 611, 706
HpyCH4IV ACGT 3 cut(s) 427, 677, 889
HpyF10VI GCNNNNNNNGC 3 cut(s) 50, 90, 282
HpyF3I CTNAG 3 cut(s) 306, 409, 752
HpySE526I ACGT 3 cut(s) 427, 677, 889
Hsp92II CATG 4 cut(s) 93, 188, 330, 348
HspAI GCGC 3 cut(s) 59, 348, 489
KpnI GGTACC 1 cut(s) 870
Ksp22I TGATCA 1 cut(s) 760
Kzo9I GATC 6 cut(s) 222, 291, 729, 760, 782, 900
LmnI GCTCC 2 cut(s) 49, 69
Lsp1109I GCAGC 4 cut(s) 73, 173, 310, 521
LweI GCATC 3 cut(s) 199, 500, 821
MaeI CTAG 2 cut(s) 117, 636
MaeII ACGT 3 cut(s) 427, 677, 889
MaeIII GTNAC 3 cut(s) 143, 358, 538
MalI GATC 6 cut(s) 224, 293, 731, 762, 784, 902
MbiI CCGCTC 1 cut(s) 87
MboI GATC 6 cut(s) 222, 291, 729, 760, 782, 900
MboII GAAGA 6 cut(s) 161, 435, 580, 747, 820, 913
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 1 cut(s) 729
MlsI TGGCCA 1 cut(s) 558
MluCI AATT 4 cut(s) 477, 500, 747, 756
MluNI TGGCCA 1 cut(s) 558
MlyI GAGTC 2 cut(s) 371, 927
MmeI TCCRAC 1 cut(s) 630
MnlI CCTC 8 cut(s) 227, 275, 295, 313, 634, 636, 639, 737
Mox20I TGGCCA 1 cut(s) 558
Mph1103I ATGCAT 1 cut(s) 814
MscI TGGCCA 1 cut(s) 558
MseI TTAA 2 cut(s) 437, 873
Msp20I TGGCCA 1 cut(s) 558
MspI CCGG 3 cut(s) 468, 482, 885
MspR9I CCNGG 3 cut(s) 237, 468, 593
MunI CAATTG 1 cut(s) 500
MvaI CCWGG 2 cut(s) 237, 593
MwoI GCNNNNNNNGC 3 cut(s) 50, 90, 282
NciI CCSGG 1 cut(s) 468
NdeII GATC 6 cut(s) 222, 291, 729, 760, 782, 900
NlaIII CATG 4 cut(s) 93, 188, 330, 348
NlaIV GGNNCC 2 cut(s) 621, 868
NmuCI GTSAC 1 cut(s) 143
NsbI TGCGCA 1 cut(s) 349
NsiI ATGCAT 1 cut(s) 814
NspI RCATGY 1 cut(s) 330
PaeR7I CTCGAG 1 cut(s) 317
PagI TCATGA 1 cut(s) 184
PfeI GAWTC 1 cut(s) 104
PflFI GACNNNGTC 1 cut(s) 380
PflMI CCANNNNNTGG 1 cut(s) 236
PfoI TCCNGGA 1 cut(s) 591
PkrI GCNGC 5 cut(s) 63, 86, 163, 325, 511
PleI GAGTC 2 cut(s) 371, 926
PpsI GAGTC 2 cut(s) 371, 926
Psp1406I AACGTT 1 cut(s) 677
Psp6I CCWGG 2 cut(s) 235, 591
PspGI CCWGG 2 cut(s) 235, 591
PspN4I GGNNCC 2 cut(s) 621, 868
PspPI GGNCC 4 cut(s) 263, 398, 470, 685
PspXI VCTCGAGB 1 cut(s) 317
PstI CTGCAG 2 cut(s) 163, 917
PsuI RGATCY 1 cut(s) 729
PsyI GACNNNGTC 1 cut(s) 380
RsaI GTAC 2 cut(s) 414, 868
RsaNI GTAC 2 cut(s) 413, 867
SaqAI TTAA 2 cut(s) 437, 873
SatI GCNGC 5 cut(s) 62, 85, 162, 324, 510
Sau3AI GATC 6 cut(s) 222, 291, 729, 760, 782, 900
Sau96I GGNCC 4 cut(s) 263, 398, 470, 685
SchI GAGTC 2 cut(s) 371, 927
ScrFI CCNGG 3 cut(s) 237, 468, 593
SfaNI GCATC 3 cut(s) 199, 500, 821
SfcI CTRYAG 3 cut(s) 79, 159, 913
Sfr274I CTCGAG 1 cut(s) 317
SinI GGWCC 4 cut(s) 263, 398, 470, 685
SlaI CTCGAG 1 cut(s) 317
SmlI CTYRAG 3 cut(s) 317, 513, 640
SmoI CTYRAG 3 cut(s) 317, 513, 640
Sse9I AATT 4 cut(s) 477, 500, 747, 756
SsiI CCGC 1 cut(s) 85
SspMI CTAG 2 cut(s) 117, 636
StyD4I CCNGG 3 cut(s) 235, 466, 591
StyI CCWWGG 1 cut(s) 401
TaaI ACNGT 4 cut(s) 134, 340, 611, 706
TaiI ACGT 3 cut(s) 430, 680, 892
TaqI TCGA 2 cut(s) 225, 318
TaqII GACCGA 1 cut(s) 370
TasI AATT 4 cut(s) 477, 500, 747, 756
TauI GCSGC 1 cut(s) 87
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 2 cut(s) 437, 873
Tru9I TTAA 2 cut(s) 437, 873
TscAI CASTG 2 cut(s) 265, 796
TseFI GTSAC 1 cut(s) 143
TseI GCWGC 4 cut(s) 61, 161, 323, 509
Tsp45I GTSAC 1 cut(s) 143
TspDTI ATGAA 3 cut(s) 173, 536, 687
TspRI CASTG 2 cut(s) 265, 796
Tth111I GACNNNGTC 1 cut(s) 380
Van91I CCANNNNNTGG 1 cut(s) 236
VpaK11BI GGWCC 4 cut(s) 263, 398, 470, 685
XapI RAATTY 1 cut(s) 747
XceI RCATGY 1 cut(s) 330
XhoI CTCGAG 1 cut(s) 317
XspI CTAG 2 cut(s) 117, 636
Zsp2I ATGCAT 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.