Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006757

Physical Location & Seq

Genomic Coordinates Forward (+)

2352963 .. 2354463

Gene Structure 1501 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G016500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGAAGATCATTAAGACTTCATTGCTAGCCTTCTTCTTTCTTCTTCCTCTTGTACTGGCTGACCTGCGGGTTGGTTTCTACAATGCTACCTGCCCACAAGCTGAATCAATTATACAACAAGTCGTGCAAAAACAGTTCGCAACTGATTCATCCATAACTGGCGGTTTGCTTCGCATGCATTTTCACGACTGCTTTGTCAGAGGATGTGATGCCTCCATACTTATAGATTCGACACCGAAGAAGCCATCTGAAAAATCGGCAGGACCAAACTTGACTGTGCGAGGATTTGAGCTTATTGACGAGGCCAAGAAACGCCTAGAGGCAGCATGCCCTTCAACTGTATCCTGTGCAGATATCATAACCCTCGCAACCCGAGATTCAGTTGTTCTTGCGGGAGGGCAAAGCTACGCTGCTCCCACCGGAAGGCGTGATGGCCTTGTTTCAAATCCCAACGACGTTAACTTGCCCGGTCCATCGTTCTCCGTGTCTCAGGCGTTGCAGGCTTTCACAGCCAAAGGGTTGACCCTAAATGACATGGTCACTCTTTTGGGTGCACACACGGTTGGTTTAGTGCACTGTAATTTTTTCCAAGATAGGCTCTCAAATTTTCAAGGCACAGGGTCTCCTGATCCTTCTATGGATCCAGCCTTGGTTGCCAAGCTGAGCAAACTTTGTGCATCTGGCAATAACCCAACTACATTTCTGGACCAAAATACATCTTCTACTTTTGATAACCAGTACTACAATCAGCTTCTTTTGAAGAGAGGTATCTTGCAGATCGACCAGGAGCTTGCTTCAGATAGATCTACGACTGGTATTGTTTCTGGATTTGCATCAAATGGTGTGAGATTCAGTCAGAGCTTTGCAACTGCTATAGTAAAGTTGGGGAGTCTCCAGGTTCTTGTCGGAAATGCCGGAGAAATTAGGAAAAATTGTAGAGTTTTTAATCCCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

319

Amino Acids

34.1

Weight (kDa)

8.6

Isoelectric Point (pI)

35.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006757)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03670 AT4G26010 AT4G26010 AT5G17820 AT5G17820
fragaria_vesca	FvH4_2g05370
malus_domestica	MD14G1010300.v1.1
prunus_persica	Prupe.7G016500_v2.0.a1
pyrus_communis	pycom14g00870
rosa_chinensis	RchiOBHm_Chr3g0495941 RchiOBHm_Chr3g0495951
rosa_laevigata	RLG00000022577
rosa_multiflora	Rmu_sc0000334.1_g000004 Rmu_sc0000334.1_g000021 Rmu_sc0003613.1_g000015
rosa_roxburghii	Rroxscaffold_6G00389830 Rroxscaffold_6G00389880
rosa_rugosa	Rorug03G0277900
rosa_samantha	Rh3AG325200 Rh3BG361300 Rh3BG361500 Rh3CG357500 Rh3CG357600 Rh3DG360700
rosa_wichuraiana	Rw3G028410 Rw3G028430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	194
Acc36I	ACCTGC	2 cut(s)	72, 98
AciI	CCGC	3 cut(s)	67, 162, 392
AclWI	GGATC	3 cut(s)	623, 635, 648
AcsI	RAATTY	1 cut(s)	604
AcuI	CTGAAG	1 cut(s)	780
AfaI	GTAC	2 cut(s)	54, 740
AfiI	CCNNNNNNNGG	1 cut(s)	423
AgsI	TTSAA	4 cut(s)	336, 444, 611, 760
AjnI	CCWGG	2 cut(s)	783, 894
AluBI	AGCT	7 cut(s)	101, 292, 405, 661, 751, 790, 861
AluI	AGCT	7 cut(s)	101, 292, 405, 661, 751, 790, 861
Alw21I	GWGCWC	2 cut(s)	556, 576
Alw26I	GTCTC	3 cut(s)	492, 627, 896
Alw44I	GTGCAC	2 cut(s)	552, 572
AlwI	GGATC	3 cut(s)	623, 635, 648
Ama87I	CYCGRG	1 cut(s)	372
AoxI	GGCC	2 cut(s)	303, 433
ApaLI	GTGCAC	2 cut(s)	552, 572
ApeKI	GCWGC	2 cut(s)	323, 410
ApoI	RAATTY	1 cut(s)	604
AspS9I	GGNCC	3 cut(s)	263, 470, 706
AsuC2I	CCSGG	1 cut(s)	468
AsuNHI	GCTAGC	1 cut(s)	25
AvaI	CYCGRG	1 cut(s)	372
AvaII	GGWCC	3 cut(s)	263, 470, 706
BaeGI	GKGCMC	2 cut(s)	556, 576
BamHI	GGATCC	1 cut(s)	640
Bbv12I	GWGCWC	2 cut(s)	556, 576
BbvI	GCAGC	2 cut(s)	335, 397
BccI	CCATC	3 cut(s)	253, 425, 481
BciT130I	CCWGG	2 cut(s)	785, 896
BciVI	GTATCC	1 cut(s)	352
BcnI	CCSGG	1 cut(s)	468
BcoDI	GTCTC	3 cut(s)	492, 627, 896
BfaI	CTAG	2 cut(s)	26, 317
BfmI	CTRYAG	1 cut(s)	873
BfuAI	ACCTGC	2 cut(s)	72, 98
BfuI	GTATCC	1 cut(s)	352
BglII	AGATCT	1 cut(s)	803
BisI	GCNGC	2 cut(s)	324, 411
BlpI	GCTNAGC	1 cut(s)	662
BlsI	GCNGC	2 cut(s)	325, 412
BmcAI	AGTACT	1 cut(s)	740
Bme1390I	CCNGG	3 cut(s)	468, 785, 896
Bme18I	GGWCC	3 cut(s)	263, 470, 706
BmeT110I	CYCGRG	1 cut(s)	372
BmgT120I	GGNCC	3 cut(s)	263, 470, 706
BmiI	GGNNCC	1 cut(s)	642
BmrFI	CCNGG	3 cut(s)	468, 785, 896
BmsI	GCATC	3 cut(s)	199, 686, 842
BmtI	GCTAGC	1 cut(s)	29
BpmI	CTGGAG	1 cut(s)	878
Bpu1102I	GCTNAGC	1 cut(s)	662
BpuMI	CCSGG	1 cut(s)	468
BsaBI	GATNNNNATC	1 cut(s)	832
BsaI	GGTCTC	1 cut(s)	627
BsaJI	CCNNGG	1 cut(s)	648
BsaWI	WCCGGW	1 cut(s)	419
BsaXI	ACNNNNNCTCC	2 cut(s)	607, 637
Bsc4I	CCNNNNNNNGG	1 cut(s)	423
Bse1I	ACTGG	4 cut(s)	60, 163, 736, 817
Bse3DI	GCAATG	1 cut(s)	20
Bse8I	GATNNNNATC	1 cut(s)	832
BseBI	CCWGG	2 cut(s)	785, 896
BseDI	CCNNGG	1 cut(s)	648
BseGI	GGATG	2 cut(s)	149, 209
BseJI	GATNNNNATC	1 cut(s)	832
BseLI	CCNNNNNNNGG	1 cut(s)	423
BseMI	GCAATG	1 cut(s)	20
BseMII	CTCAG	2 cut(s)	503, 653
BseNI	ACTGG	4 cut(s)	60, 163, 736, 817
BseSI	GKGCMC	2 cut(s)	556, 576
BseXI	GCAGC	2 cut(s)	335, 397
BsgI	GTGCAG	1 cut(s)	369
BshFI	GGCC	2 cut(s)	305, 435
BsiHKAI	GWGCWC	2 cut(s)	556, 576
BsiHKCI	CYCGRG	1 cut(s)	372
BsiSI	CCGG	3 cut(s)	420, 468, 915
BslI	CCNNNNNNNGG	1 cut(s)	423
BsmAI	GTCTC	3 cut(s)	492, 627, 896
BsnI	GGCC	2 cut(s)	305, 435
Bso31I	GGTCTC	1 cut(s)	627
BsoBI	CYCGRG	1 cut(s)	372
Bsp1286I	GDGCHC	2 cut(s)	556, 576
Bsp143I	GATC	5 cut(s)	6, 628, 640, 777, 803
Bsp1720I	GCTNAGC	1 cut(s)	662
BspACI	CCGC	3 cut(s)	67, 162, 392
BspANI	GGCC	2 cut(s)	305, 435
BspCNI	CTCAG	2 cut(s)	502, 654
BspLI	GGNNCC	1 cut(s)	642
BspMI	ACCTGC	2 cut(s)	72, 98
BspOI	GCTAGC	1 cut(s)	29
BspPI	GGATC	3 cut(s)	623, 635, 648
BspTNI	GGTCTC	1 cut(s)	627
BsrDI	GCAATG	1 cut(s)	20
BsrI	ACTGG	4 cut(s)	60, 163, 736, 817
BssECI	CCNNGG	1 cut(s)	648
BssMI	GATC	5 cut(s)	6, 628, 640, 777, 803
BssT1I	CCWWGG	1 cut(s)	648
Bst2UI	CCWGG	2 cut(s)	785, 896
Bst4CI	ACNGT	5 cut(s)	135, 277, 340, 562, 578
Bst6I	CTCTTC	1 cut(s)	755
BstC8I	GCNNGC	5 cut(s)	27, 176, 328, 501, 792
BstDEI	CTNAG	2 cut(s)	489, 662
BstF5I	GGATG	2 cut(s)	149, 209
BstKTI	GATC	5 cut(s)	9, 631, 643, 780, 806
BstMAI	GTCTC	3 cut(s)	492, 627, 896
BstMBI	GATC	5 cut(s)	6, 628, 640, 777, 803
BstMWI	GCNNNNNNNGC	4 cut(s)	175, 500, 509, 653
BstNI	CCWGG	2 cut(s)	785, 896
BstNSI	RCATGY	2 cut(s)	178, 330
BstSCI	CCNGG	3 cut(s)	466, 783, 894
BstSFI	CTRYAG	1 cut(s)	873
BstSLI	GKGCMC	2 cut(s)	556, 576
BstV1I	GCAGC	2 cut(s)	335, 397
BstX2I	RGATCY	2 cut(s)	640, 803
BstYI	RGATCY	2 cut(s)	640, 803
BsuI	GTATCC	1 cut(s)	352
BsuRI	GGCC	2 cut(s)	305, 435
BtsCI	GGATG	2 cut(s)	149, 209
BtsIMutI	CAGTG	1 cut(s)	574
BveI	ACCTGC	2 cut(s)	72, 98
Cac8I	GCNNGC	5 cut(s)	27, 176, 328, 501, 792
Cfr13I	GGNCC	3 cut(s)	263, 470, 706
Csp6I	GTAC	2 cut(s)	53, 739
CviAII	CATG	3 cut(s)	175, 327, 535
CviQI	GTAC	2 cut(s)	53, 739
DdeI	CTNAG	2 cut(s)	489, 662
DpnI	GATC	5 cut(s)	8, 630, 642, 779, 805
DpnII	GATC	5 cut(s)	6, 628, 640, 777, 803
DrdI	GACNNNNNNGTC	1 cut(s)	194
DseDI	GACNNNNNNGTC	1 cut(s)	194
Eam1104I	CTCTTC	1 cut(s)	755
EarI	CTCTTC	1 cut(s)	755
Eco130I	CCWWGG	1 cut(s)	648
Eco31I	GGTCTC	1 cut(s)	627
Eco32I	GATATC	1 cut(s)	355
Eco47I	GGWCC	3 cut(s)	263, 470, 706
Eco57I	CTGAAG	1 cut(s)	780
Eco88I	CYCGRG	1 cut(s)	372
EcoRII	CCWGG	2 cut(s)	783, 894
EcoRV	GATATC	1 cut(s)	355
EcoT14I	CCWWGG	1 cut(s)	648
EcoT22I	ATGCAT	1 cut(s)	180
ErhI	CCWWGG	1 cut(s)	648
FaeI	CATG	3 cut(s)	178, 330, 538
FatI	CATG	3 cut(s)	174, 326, 534
FauI	CCCGC	2 cut(s)	60, 385
Fnu4HI	GCNGC	2 cut(s)	324, 411
FokI	GGATG	2 cut(s)	136, 216
Fsp4HI	GCNGC	2 cut(s)	324, 411
FspBI	CTAG	2 cut(s)	26, 317
GluI	GCNGC	2 cut(s)	324, 411
GsuI	CTGGAG	1 cut(s)	878
HaeIII	GGCC	2 cut(s)	305, 435
HapII	CCGG	3 cut(s)	420, 468, 915
Hin1II	CATG	3 cut(s)	178, 330, 538
HincII	GTYRAC	2 cut(s)	460, 522
HindII	GTYRAC	2 cut(s)	460, 522
HinfI	GANTC	6 cut(s)	104, 146, 227, 377, 849, 889
HpaI	GTTAAC	1 cut(s)	460
HpaII	CCGG	3 cut(s)	420, 468, 915
Hpy166II	GTNNAC	4 cut(s)	460, 522, 554, 574
Hpy188I	TCNGA	5 cut(s)	200, 250, 799, 858, 908
Hpy188III	TCNNGA	4 cut(s)	185, 626, 704, 825
Hpy8I	GTNNAC	4 cut(s)	460, 522, 554, 574
Hpy99I	CGWCG	1 cut(s)	458
HpyAV	CCTTC	4 cut(s)	40, 342, 417, 642
HpyCH4III	ACNGT	5 cut(s)	135, 277, 340, 562, 578
HpyCH4IV	ACGT	1 cut(s)	456
HpyF10VI	GCNNNNNNNGC	4 cut(s)	175, 500, 509, 653
HpyF3I	CTNAG	2 cut(s)	489, 662
HpySE526I	ACGT	1 cut(s)	456
Hsp92II	CATG	3 cut(s)	178, 330, 538
KspAI	GTTAAC	1 cut(s)	460
Kzo9I	GATC	5 cut(s)	6, 628, 640, 777, 803
LmnI	GCTCC	2 cut(s)	418, 787
Lsp1109I	GCAGC	2 cut(s)	335, 397
LweI	GCATC	3 cut(s)	199, 686, 842
MaeI	CTAG	2 cut(s)	26, 317
MaeII	ACGT	1 cut(s)	456
MaeIII	GTNAC	1 cut(s)	538
MalI	GATC	5 cut(s)	8, 630, 642, 779, 805
MboI	GATC	5 cut(s)	6, 628, 640, 777, 803
MboII	GAAGA	7 cut(s)	16, 25, 32, 35, 250, 711, 772
MflI	RGATCY	2 cut(s)	640, 803
MhlI	GDGCHC	2 cut(s)	556, 576
MluCI	AATT	5 cut(s)	108, 580, 604, 921, 931
MlyI	GAGTC	1 cut(s)	898
MmeI	TCCRAC	1 cut(s)	886
MnlI	CCTC	9 cut(s)	57, 194, 223, 275, 295, 313, 374, 389, 758
Mph1103I	ATGCAT	1 cut(s)	180
MseI	TTAA	3 cut(s)	12, 459, 945
MspI	CCGG	3 cut(s)	420, 468, 915
MspR9I	CCNGG	3 cut(s)	468, 785, 896
MvaI	CCWGG	2 cut(s)	785, 896
MwoI	GCNNNNNNNGC	4 cut(s)	175, 500, 509, 653
NciI	CCSGG	1 cut(s)	468
NdeII	GATC	5 cut(s)	6, 628, 640, 777, 803
NheI	GCTAGC	1 cut(s)	25
NlaIII	CATG	3 cut(s)	178, 330, 538
NlaIV	GGNNCC	1 cut(s)	642
NmuCI	GTSAC	1 cut(s)	538
NsiI	ATGCAT	1 cut(s)	180
NspI	RCATGY	2 cut(s)	178, 330
PaeI	GCATGC	2 cut(s)	178, 330
PfeI	GAWTC	5 cut(s)	104, 146, 227, 377, 849
PflFI	GACNNNGTC	1 cut(s)	536
PkrI	GCNGC	2 cut(s)	325, 412
PleI	GAGTC	1 cut(s)	897
PpsI	GAGTC	1 cut(s)	897
Psp6I	CCWGG	2 cut(s)	783, 894
PspGI	CCWGG	2 cut(s)	783, 894
PspN4I	GGNNCC	1 cut(s)	642
PspPI	GGNCC	3 cut(s)	263, 470, 706
PsuI	RGATCY	2 cut(s)	640, 803
PsyI	GACNNNGTC	1 cut(s)	536
RsaI	GTAC	2 cut(s)	54, 740
RsaNI	GTAC	2 cut(s)	53, 739
SaqAI	TTAA	3 cut(s)	12, 459, 945
SatI	GCNGC	2 cut(s)	324, 411
Sau3AI	GATC	5 cut(s)	6, 628, 640, 777, 803
Sau96I	GGNCC	3 cut(s)	263, 470, 706
ScaI	AGTACT	1 cut(s)	740
SchI	GAGTC	1 cut(s)	898
ScrFI	CCNGG	3 cut(s)	468, 785, 896
SduI	GDGCHC	2 cut(s)	556, 576
SfaNI	GCATC	3 cut(s)	199, 686, 842
SfcI	CTRYAG	1 cut(s)	873
SinI	GGWCC	3 cut(s)	263, 470, 706
SphI	GCATGC	2 cut(s)	178, 330
Sse9I	AATT	5 cut(s)	108, 580, 604, 921, 931
SsiI	CCGC	3 cut(s)	67, 162, 392
SspMI	CTAG	2 cut(s)	26, 317
StyD4I	CCNGG	3 cut(s)	466, 783, 894
StyI	CCWWGG	1 cut(s)	648
TaaI	ACNGT	5 cut(s)	135, 277, 340, 562, 578
TaiI	ACGT	1 cut(s)	459
TaqI	TCGA	2 cut(s)	230, 780
TasI	AATT	5 cut(s)	108, 580, 604, 921, 931
TatI	WGTACW	2 cut(s)	52, 738
TfiI	GAWTC	5 cut(s)	104, 146, 227, 377, 849
Tru1I	TTAA	3 cut(s)	12, 459, 945
Tru9I	TTAA	3 cut(s)	12, 459, 945
TscAI	CASTG	1 cut(s)	581
TseFI	GTSAC	1 cut(s)	538
TseI	GCWGC	2 cut(s)	323, 410
Tsp45I	GTSAC	1 cut(s)	538
TspDTI	ATGAA	3 cut(s)	9, 17, 138
TspGWI	ACGGA	1 cut(s)	472
TspRI	CASTG	1 cut(s)	581
Tth111I	GACNNNGTC	1 cut(s)	536
VneI	GTGCAC	2 cut(s)	552, 572
VpaK11BI	GGWCC	3 cut(s)	263, 470, 706
XapI	RAATTY	1 cut(s)	604
XceI	RCATGY	2 cut(s)	178, 330
XspI	CTAG	2 cut(s)	26, 317
ZrmI	AGTACT	1 cut(s)	740
Zsp2I	ATGCAT	1 cut(s)	180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.