High Mobility Group
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17560 AT2G17560 AT2G17560 AT4G35570 AT4G35570 |
| fragaria_vesca | FvH4_1g10340 |
| malus_domestica | MD02G1116500.v1.1 MD02G1116600.v1.1 MD15G1231500.v1.1 MD15G1231700.v1.1 |
| prunus_persica | Prupe.7G182700_v2.0.a1 Prupe.7G182800_v2.0.a1 |
| pyrus_communis | pycom02g09050 |
| rosa_chinensis | RchiOBHm_Chr2g0097191 |
| rosa_multiflora | Rmu_sc0001182.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00144890 |
| rosa_rugosa | Rorug02G0065500 |
| rosa_wichuraiana | Rw2G008730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 83, 96 |
| AcuI | CTGAAG | 1 cut(s) | 252 |
| AgsI | TTSAA | 2 cut(s) | 26, 52 |
| AjnI | CCWGG | 1 cut(s) | 132 |
| AluBI | AGCT | 2 cut(s) | 206, 365 |
| AluI | AGCT | 2 cut(s) | 206, 365 |
| Alw21I | GWGCWC | 2 cut(s) | 38, 247 |
| AlwI | GGATC | 2 cut(s) | 83, 96 |
| AoxI | GGCC | 1 cut(s) | 98 |
| ApeKI | GCWGC | 2 cut(s) | 203, 365 |
| BamHI | GGATCC | 1 cut(s) | 88 |
| BbsI | GAAGAC | 1 cut(s) | 121 |
| Bbv12I | GWGCWC | 2 cut(s) | 38, 247 |
| BbvI | GCAGC | 2 cut(s) | 215, 352 |
| BciT130I | CCWGG | 1 cut(s) | 134 |
| BisI | GCNGC | 2 cut(s) | 204, 366 |
| BlsI | GCNGC | 2 cut(s) | 205, 367 |
| Bme1390I | CCNGG | 1 cut(s) | 134 |
| BmiI | GGNNCC | 1 cut(s) | 90 |
| BmrFI | CCNGG | 1 cut(s) | 134 |
| BpiI | GAAGAC | 1 cut(s) | 121 |
| BpmI | CTGGAG | 1 cut(s) | 360 |
| Bse1I | ACTGG | 2 cut(s) | 321, 343 |
| BseBI | CCWGG | 1 cut(s) | 134 |
| BseMII | CTCAG | 1 cut(s) | 270 |
| BseNI | ACTGG | 2 cut(s) | 321, 343 |
| BseRI | GAGGAG | 1 cut(s) | 46 |
| BseXI | GCAGC | 2 cut(s) | 215, 352 |
| BshFI | GGCC | 1 cut(s) | 100 |
| BsiHKAI | GWGCWC | 2 cut(s) | 38, 247 |
| BsnI | GGCC | 1 cut(s) | 100 |
| Bsp1286I | GDGCHC | 2 cut(s) | 38, 247 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspANI | GGCC | 1 cut(s) | 100 |
| BspCNI | CTCAG | 1 cut(s) | 271 |
| BspLI | GGNNCC | 1 cut(s) | 90 |
| BspPI | GGATC | 2 cut(s) | 83, 96 |
| BsrI | ACTGG | 2 cut(s) | 321, 343 |
| BssMI | GATC | 1 cut(s) | 88 |
| Bst2UI | CCWGG | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 1 cut(s) | 303 |
| BstDEI | CTNAG | 2 cut(s) | 102, 279 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BstNI | CCWGG | 1 cut(s) | 134 |
| BstSCI | CCNGG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 2 cut(s) | 215, 352 |
| BstV2I | GAAGAC | 1 cut(s) | 121 |
| BstX2I | RGATCY | 1 cut(s) | 88 |
| BstYI | RGATCY | 1 cut(s) | 88 |
| BsuRI | GGCC | 1 cut(s) | 100 |
| BtsIMutI | CAGTG | 1 cut(s) | 36 |
| CviAII | CATG | 2 cut(s) | 226, 310 |
| CviJI | RGCY | 5 cut(s) | 100, 164, 206, 320, 365 |
| CviKI_1 | RGCY | 5 cut(s) | 100, 164, 206, 320, 365 |
| DdeI | CTNAG | 2 cut(s) | 102, 279 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| Eco147I | AGGCCT | 1 cut(s) | 100 |
| Eco57I | CTGAAG | 1 cut(s) | 252 |
| EcoRII | CCWGG | 1 cut(s) | 132 |
| FaeI | CATG | 2 cut(s) | 229, 313 |
| FaiI | YATR | 5 cut(s) | 227, 285, 296, 306, 311 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 232, 264 |
| FatI | CATG | 2 cut(s) | 225, 309 |
| Fnu4HI | GCNGC | 2 cut(s) | 204, 366 |
| Fsp4HI | GCNGC | 2 cut(s) | 204, 366 |
| GluI | GCNGC | 2 cut(s) | 204, 366 |
| GsuI | CTGGAG | 1 cut(s) | 360 |
| HaeIII | GGCC | 1 cut(s) | 100 |
| Hin1II | CATG | 2 cut(s) | 229, 313 |
| HinfI | GANTC | 1 cut(s) | 26 |
| Hpy188I | TCNGA | 1 cut(s) | 146 |
| Hpy99I | CGWCG | 1 cut(s) | 188 |
| HpyCH4III | ACNGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 1 cut(s) | 298 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 279 |
| Hsp92II | CATG | 2 cut(s) | 229, 313 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LmnI | GCTCC | 1 cut(s) | 33 |
| LpnPI | CCDG | 8 cut(s) | 82, 119, 146, 146, 183, 192, 302, 324 |
| Lsp1109I | GCAGC | 2 cut(s) | 215, 352 |
| MaeIII | GTNAC | 1 cut(s) | 289 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MboII | GAAGA | 4 cut(s) | 115, 121, 245, 248 |
| MflI | RGATCY | 1 cut(s) | 88 |
| MhlI | GDGCHC | 2 cut(s) | 38, 247 |
| MmeI | TCCRAC | 1 cut(s) | 52 |
| MnlI | CCTC | 2 cut(s) | 24, 53 |
| MseI | TTAA | 1 cut(s) | 156 |
| MspA1I | CMGCKG | 1 cut(s) | 206 |
| MspR9I | CCNGG | 1 cut(s) | 134 |
| MvaI | CCWGG | 1 cut(s) | 134 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIII | CATG | 2 cut(s) | 229, 313 |
| NlaIV | GGNNCC | 1 cut(s) | 90 |
| NmuCI | GTSAC | 1 cut(s) | 289 |
| PceI | AGGCCT | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 26 |
| PfoI | TCCNGGA | 1 cut(s) | 132 |
| PkrI | GCNGC | 2 cut(s) | 205, 367 |
| Psp6I | CCWGG | 1 cut(s) | 132 |
| PspGI | CCWGG | 1 cut(s) | 132 |
| PspN4I | GGNNCC | 1 cut(s) | 90 |
| PsuI | RGATCY | 1 cut(s) | 88 |
| PvuII | CAGCTG | 1 cut(s) | 206 |
| SaqAI | TTAA | 1 cut(s) | 156 |
| SatI | GCNGC | 2 cut(s) | 204, 366 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| ScrFI | CCNGG | 1 cut(s) | 134 |
| SduI | GDGCHC | 2 cut(s) | 38, 247 |
| SetI | ASST | 3 cut(s) | 208, 250, 367 |
| SseBI | AGGCCT | 1 cut(s) | 100 |
| StuI | AGGCCT | 1 cut(s) | 100 |
| StyD4I | CCNGG | 1 cut(s) | 132 |
| TaaI | ACNGT | 1 cut(s) | 303 |
| TaqI | TCGA | 1 cut(s) | 29 |
| TfiI | GAWTC | 1 cut(s) | 26 |
| Tru1I | TTAA | 1 cut(s) | 156 |
| Tru9I | TTAA | 1 cut(s) | 156 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TseFI | GTSAC | 1 cut(s) | 289 |
| TseI | GCWGC | 2 cut(s) | 203, 365 |
| Tsp45I | GTSAC | 1 cut(s) | 289 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 2 cut(s) | 32, 172 |
| TspRI | CASTG | 1 cut(s) | 43 |