Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010681

Physical Location & Seq

Genomic Coordinates Reverse (-)

16946369 .. 16950620

Gene Structure 4252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGAAGCAGAGCCGTGGTAGCTTCAATAACGAAAGAAAGCCCTAGACAGCACCGTATGAAACTGGAGGTGTACGGTGAGGTTCTTCAACGAATCCAGGAATCCAATTACGAAGAAGCTAATTTCCCTGGTTTTGATGATCTCCTCTGGCTTCACTTCAATCGTCTTCCTGCTCGATATGCTTTGGATGTAAATGTTGAGAGAGCAGAAGATGTACTTACTCATCAGAGATTGTTGAAATTGGCTGAAGATCCTGCTACTAGACCTGTTTTCGAAGTTCGTTGTGTGCAGGTTTCTCCCACATTGAATGGAAATTCTGGTGACGTTGATCCTTCGGATCCTGCGGTCAATGAAGATGCTCAAAGCTCCTATAACTCGAGGTCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAAGCTCTTACTCAAGCTTACAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGCACAGTTGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATCGACAGGCCGAAACTCCTTAGTCAGCTAACTTCCATGCTTGGTGAACTTGGATTGAATATTCAAGAGGCTCATGCTTTCTCTACCGCCGATGGTTTCTCTCTCGATGTATTTGTTGTTGATGGCTGGTCGCAGGAGGAAACAGAAGGTTTAAAAGATGCATTGAAGAAGGAGATAAGAAAGTTTAAGGATCAACCTTGTTCAAAACAGAAATCTATCACTTTCTTTGAGCATGACAAATCAACCAACGAGCTGCTACCTGCGTGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAGCAGCTCAAAATTGAAAAAAAGGTGGCATGTGGATCATACGGGGAACTATTTAGAGGAACCTATTGTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGCTACGAGAGTTTTCTCAGGAAGTATATATAATGAGGAAAGTTCGGCATAAAAATGTTGTCCAGTTCATTGGTGCATGTACACGATCACCAAACCTCTGCATTGTGACAGAGTTCATGACTCGGGGGAGCATTTATGATTTCCTTCACAAACACAAAGGGGTTTTTAAAATTCAATCTTTGCTCAAAGTGGCACTCGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTATTCATAGAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAAGTTGCCGATTTTGGTGTTGCCAGAGTGCAGACTGAGTCAGGGGTTATGACAGCGGAAACAGGGACATACCGATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCAGATGTCTTCAGCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGAACTCCCATATTCTTACTTGACTCCACTGCAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAAAGGAAACACACCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCTCTAAGACCCAATTTTGCAGAAATCATAGAAATGCTTAACCAACTAATCCGCGAGGTTGGAGATGATGAGCGCCACAAGGATAAACATGGTGGTTACTTTTCAGGCCTAAAAAAAGGCCATCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

570

Amino Acids

64.7

Weight (kDa)

5.69

Isoelectric Point (pI)

44.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ACT	PF01842	180 - 243	6.8e-06	ACT domain
PK_Tyr_Ser-Thr	PF07714	292 - 541	6.8e-73	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	294 - 539	7.6e-59	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17700 AT4G35780
fragaria_vesca	FvH4_1g10940 FvH4_1g10940 FvH4_1g10940
malus_domestica	MD02G1122500.v1.1 MD15G1236700.v1.1
prunus_persica	Prupe.7G176000_v2.0.a1
pyrus_communis	pycom02g09550 pycom15g21040
rosa_chinensis	RchiOBHm_Chr2g0098201
rosa_laevigata	RLG00000016776
rosa_multiflora	Rmu_sc0009178.1_g000003
rosa_roxburghii	Rroxscaffold_2G00144160
rosa_rugosa	Rorug02G0071100 Rorug02G0071200.1
rosa_samantha	Rh2AG118300 Rh2BG121300 Rh2DG123000
rosa_wichuraiana	Rw2G009270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1191
Acc36I	ACCTGC	2 cut(s)	310, 823
AccB7I	CCANNNNNTGG	1 cut(s)	431
AccII	CGCG	2 cut(s)	1421, 1638
AciI	CCGC	6 cut(s)	33, 374, 642, 983, 1337, 1636
AclWI	GGATC	6 cut(s)	275, 353, 362, 375, 753, 910
AcsI	RAATTY	5 cut(s)	343, 445, 957, 1158, 1521
AcuI	CTGAAG	2 cut(s)	297, 1396
AcyI	GRCGYC	1 cut(s)	1188
AfaI	GTAC	3 cut(s)	104, 246, 1069
AfiI	CCNNNNNNNGG	3 cut(s)	431, 839, 1360
AflII	CTTAAG	1 cut(s)	1241
AjnI	CCWGG	2 cut(s)	126, 157
AjuI	GAANNNNNNNTTGG	2 cut(s)	418, 450
Alw21I	GWGCWC	1 cut(s)	1383
Alw26I	GTCTC	4 cut(s)	11, 417, 1195, 1230
AlwI	GGATC	6 cut(s)	275, 353, 362, 375, 753, 910
Ama87I	CYCGRG	2 cut(s)	406, 1110
AoxI	GGCC	3 cut(s)	563, 1690, 1702
ApeKI	GCWGC	4 cut(s)	808, 871, 1484, 1573
ApoI	RAATTY	5 cut(s)	343, 445, 957, 1158, 1521
AspLEI	GCGC	1 cut(s)	1659
AsuHPI	GGTGA	5 cut(s)	119, 362, 535, 611, 1068
AsuII	TTCGAA	2 cut(s)	303, 450
AvaI	CYCGRG	2 cut(s)	406, 1110
BamHI	GGATCC	1 cut(s)	367
BbsI	GAAGAC	2 cut(s)	188, 1402
Bbv12I	GWGCWC	1 cut(s)	1383
BbvI	GCAGC	4 cut(s)	795, 883, 1471, 1585
BccI	CCATC	5 cut(s)	641, 671, 833, 1350, 1354
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	479, 513
BciT130I	CCWGG	2 cut(s)	128, 159
BclI	TGATCA	1 cut(s)	1393
BcoDI	GTCTC	4 cut(s)	11, 417, 1195, 1230
BfaI	CTAG	2 cut(s)	75, 291
BfoI	RGCGCY	1 cut(s)	1660
BfrI	CTTAAG	1 cut(s)	1241
BfuAI	ACCTGC	2 cut(s)	310, 823
BisI	GCNGC	4 cut(s)	809, 872, 1485, 1574
BlsI	GCNGC	4 cut(s)	810, 873, 1486, 1575
Bme1390I	CCNGG	2 cut(s)	128, 159
BmeT110I	CYCGRG	2 cut(s)	406, 1110
BmiI	GGNNCC	3 cut(s)	369, 928, 1365
BmrFI	CCNGG	2 cut(s)	128, 159
BmrI	ACTGGG	1 cut(s)	1455
BmsI	GCATC	4 cut(s)	376, 522, 703, 1222
BmuI	ACTGGG	1 cut(s)	1455
BpiI	GAAGAC	2 cut(s)	188, 1402
BpmI	CTGGAG	2 cut(s)	116, 1350
Bpu10I	CCTNAGC	1 cut(s)	969
Bpu14I	TTCGAA	2 cut(s)	303, 450
BpuEI	CTTGAG	4 cut(s)	447, 468, 947, 1580
BsaHI	GRCGYC	1 cut(s)	1188
BsaI	GGTCTC	2 cut(s)	417, 1230
BsaJI	CCNNGG	2 cut(s)	45, 157
Bsc4I	CCNNNNNNNGG	3 cut(s)	431, 839, 1360
Bse1I	ACTGG	3 cut(s)	99, 1051, 1450
BseBI	CCWGG	2 cut(s)	128, 159
BseDI	CCNNGG	2 cut(s)	45, 157
BseGI	GGATG	3 cut(s)	223, 844, 1365
BseLI	CCNNNNNNNGG	3 cut(s)	431, 839, 1360
BseMII	CTCAG	3 cut(s)	960, 1019, 1308
BseNI	ACTGG	3 cut(s)	99, 1051, 1450
BseRI	GAGGAG	3 cut(s)	29, 38, 164
BseXI	GCAGC	4 cut(s)	795, 883, 1471, 1585
BseYI	CCCAGC	1 cut(s)	1582
BsgI	GTGCAG	2 cut(s)	338, 1331
Bsh1236I	CGCG	2 cut(s)	1421, 1638
Bsh1285I	CGRYCG	1 cut(s)	530
BshFI	GGCC	3 cut(s)	565, 1692, 1704
BsiEI	CGRYCG	1 cut(s)	530
BsiHKAI	GWGCWC	1 cut(s)	1383
BsiHKCI	CYCGRG	2 cut(s)	406, 1110
BslFI	GGGAC	2 cut(s)	1360, 1521
BslI	CCNNNNNNNGG	3 cut(s)	431, 839, 1360
BsmAI	GTCTC	4 cut(s)	11, 417, 1195, 1230
BsmBI	CGTCTC	2 cut(s)	11, 1195
BsmFI	GGGAC	2 cut(s)	1360, 1521
BsnI	GGCC	3 cut(s)	565, 1692, 1704
Bso31I	GGTCTC	2 cut(s)	417, 1230
BsoBI	CYCGRG	2 cut(s)	406, 1110
Bsp119I	TTCGAA	2 cut(s)	303, 450
Bsp1286I	GDGCHC	1 cut(s)	1383
Bsp1407I	TGTACA	1 cut(s)	1067
BspACI	CCGC	6 cut(s)	33, 374, 642, 983, 1337, 1636
BspANI	GGCC	3 cut(s)	565, 1692, 1704
BspCNI	CTCAG	3 cut(s)	961, 1018, 1309
BspFNI	CGCG	2 cut(s)	1421, 1638
BspHI	TCATGA	1 cut(s)	1104
BspLI	GGNNCC	3 cut(s)	369, 928, 1365
BspMI	ACCTGC	2 cut(s)	310, 823
BspPI	GGATC	6 cut(s)	275, 353, 362, 375, 753, 910
BspT104I	TTCGAA	2 cut(s)	303, 450
BspTI	CTTAAG	1 cut(s)	1241
BspTNI	GGTCTC	2 cut(s)	417, 1230
BsrGI	TGTACA	1 cut(s)	1067
BsrI	ACTGG	3 cut(s)	99, 1051, 1450
BssECI	CCNNGG	2 cut(s)	45, 157
BssNI	GRCGYC	1 cut(s)	1188
Bst2UI	CCWGG	2 cut(s)	128, 159
Bst4CI	ACNGT	3 cut(s)	86, 107, 513
BstACI	GRCGYC	1 cut(s)	1188
BstAFI	CTTAAG	1 cut(s)	1241
BstAUI	TGTACA	1 cut(s)	1067
BstBI	TTCGAA	2 cut(s)	303, 450
BstC8I	GCNNGC	2 cut(s)	1482, 1571
BstDEI	CTNAG	6 cut(s)	575, 969, 1005, 1317, 1511, 1589
BstDSI	CCRYGG	1 cut(s)	45
BstF5I	GGATG	3 cut(s)	223, 844, 1365
BstFNI	CGCG	2 cut(s)	1421, 1638
BstH2I	RGCGCY	1 cut(s)	1660
BstHHI	GCGC	1 cut(s)	1659
BstMAI	GTCTC	4 cut(s)	11, 417, 1195, 1230
BstMCI	CGRYCG	1 cut(s)	530
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 209, 506
BstNI	CCWGG	2 cut(s)	128, 159
BstNSI	RCATGY	2 cut(s)	900, 1068
BstSCI	CCNGG	2 cut(s)	126, 157
BstUI	CGCG	2 cut(s)	1421, 1638
BstV1I	GCAGC	4 cut(s)	795, 883, 1471, 1585
BstV2I	GAAGAC	2 cut(s)	188, 1402
BstX2I	RGATCY	2 cut(s)	280, 367
BstXI	CCANNNNNNTGG	1 cut(s)	1058
BstYI	RGATCY	2 cut(s)	280, 367
BsuRI	GGCC	3 cut(s)	565, 1692, 1704
BtgI	CCRYGG	1 cut(s)	45
BtsCI	GGATG	3 cut(s)	223, 844, 1365
BtsI	GCAGTG	1 cut(s)	1475
BtsIMutI	CAGTG	1 cut(s)	1475
BveI	ACCTGC	2 cut(s)	310, 823
Cac8I	GCNNGC	2 cut(s)	1482, 1571
CciI	TCATGA	1 cut(s)	1104
CfoI	GCGC	1 cut(s)	1659
Csp6I	GTAC	3 cut(s)	103, 245, 1068
CviQI	GTAC	3 cut(s)	103, 245, 1068
DdeI	CTNAG	6 cut(s)	575, 969, 1005, 1317, 1511, 1589
DraI	TTTAAA	2 cut(s)	708, 1156
Eco147I	AGGCCT	1 cut(s)	1692
Eco31I	GGTCTC	2 cut(s)	417, 1230
Eco57I	CTGAAG	2 cut(s)	297, 1396
Eco88I	CYCGRG	2 cut(s)	406, 1110
EcoRII	CCWGG	2 cut(s)	126, 157
EcoT22I	ATGCAT	1 cut(s)	718
Esp3I	CGTCTC	2 cut(s)	11, 1195
FalI	AAGNNNNNCTT	2 cut(s)	231, 263
FaqI	GGGAC	2 cut(s)	1360, 1521
FbaI	TGATCA	1 cut(s)	1393
Fnu4HI	GCNGC	4 cut(s)	809, 872, 1485, 1574
FokI	GGATG	3 cut(s)	230, 851, 1372
Fsp4HI	GCNGC	4 cut(s)	809, 872, 1485, 1574
FspBI	CTAG	2 cut(s)	75, 291
GlaI	GCGC	1 cut(s)	1658
GluI	GCNGC	4 cut(s)	809, 872, 1485, 1574
GsaI	CCCAGC	1 cut(s)	1586
GsuI	CTGGAG	2 cut(s)	116, 1350
HaeII	RGCGCY	1 cut(s)	1660
HaeIII	GGCC	3 cut(s)	565, 1692, 1704
HhaI	GCGC	1 cut(s)	1659
Hin1I	GRCGYC	1 cut(s)	1188
Hin6I	GCGC	1 cut(s)	1657
HinP1I	GCGC	1 cut(s)	1657
HindIII	AAGCTT	1 cut(s)	465
HinfI	GANTC	5 cut(s)	123, 131, 1108, 1319, 1471
HphI	GGTGA	5 cut(s)	119, 362, 535, 611, 1068
Hpy166II	GTNNAC	3 cut(s)	103, 602, 1070
Hpy188I	TCNGA	3 cut(s)	258, 367, 444
Hpy8I	GTNNAC	3 cut(s)	103, 602, 1070
Hpy99I	CGWCG	1 cut(s)	1190
HpyAV	CCTTC	4 cut(s)	372, 695, 718, 1142
HpyCH4III	ACNGT	3 cut(s)	86, 107, 513
HpyCH4IV	ACGT	2 cut(s)	354, 1188
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 209, 506
HpyF3I	CTNAG	6 cut(s)	575, 969, 1005, 1317, 1511, 1589
HpySE526I	ACGT	2 cut(s)	354, 1188
Hsp92I	GRCGYC	1 cut(s)	1188
HspAI	GCGC	1 cut(s)	1657
Ksp22I	TGATCA	1 cut(s)	1393
LmnI	GCTCC	3 cut(s)	401, 1116, 1369
Lsp1109I	GCAGC	4 cut(s)	795, 883, 1471, 1585
LweI	GCATC	4 cut(s)	376, 522, 703, 1222
MaeI	CTAG	2 cut(s)	75, 291
MaeII	ACGT	2 cut(s)	354, 1188
MaeIII	GTNAC	3 cut(s)	350, 1093, 1679
MflI	RGATCY	2 cut(s)	280, 367
MhlI	GDGCHC	1 cut(s)	1383
MlyI	GAGTC	3 cut(s)	1102, 1328, 1465
MmeI	TCCRAC	2 cut(s)	449, 1624
Mph1103I	ATGCAT	1 cut(s)	718
MseI	TTAA	6 cut(s)	707, 741, 978, 1155, 1242, 1623
MslI	CAYNNNNRTG	3 cut(s)	1041, 1354, 1616
MspA1I	CMGCKG	1 cut(s)	1337
MspCI	CTTAAG	1 cut(s)	1241
MspR9I	CCNGG	2 cut(s)	128, 159
MvaI	CCWGG	2 cut(s)	128, 159
MvnI	CGCG	2 cut(s)	1421, 1638
MwoI	GCNNNNNNNGC	3 cut(s)	50, 209, 506
NlaIV	GGNNCC	3 cut(s)	369, 928, 1365
NmuCI	GTSAC	2 cut(s)	350, 1093
NsiI	ATGCAT	1 cut(s)	718
NspI	RCATGY	2 cut(s)	900, 1068
NspV	TTCGAA	2 cut(s)	303, 450
PaeR7I	CTCGAG	1 cut(s)	406
PagI	TCATGA	1 cut(s)	1104
PceI	AGGCCT	1 cut(s)	1692
PfeI	GAWTC	2 cut(s)	123, 131
PflFI	GACNNNGTC	1 cut(s)	1318
PflMI	CCANNNNNTGG	1 cut(s)	431
PfoI	TCCNGGA	1 cut(s)	126
PkrI	GCNGC	4 cut(s)	810, 873, 1486, 1575
PleI	GAGTC	3 cut(s)	1102, 1327, 1465
PpsI	GAGTC	3 cut(s)	1102, 1327, 1465
Psp6I	CCWGG	2 cut(s)	126, 157
PspFI	CCCAGC	1 cut(s)	1582
PspGI	CCWGG	2 cut(s)	126, 157
PspN4I	GGNNCC	3 cut(s)	369, 928, 1365
PspXI	VCTCGAGB	1 cut(s)	406
PsuI	RGATCY	2 cut(s)	280, 367
PsyI	GACNNNGTC	1 cut(s)	1318
RsaI	GTAC	3 cut(s)	104, 246, 1069
RsaNI	GTAC	3 cut(s)	103, 245, 1068
RseI	CAYNNNNRTG	3 cut(s)	1041, 1354, 1616
SaqAI	TTAA	6 cut(s)	707, 741, 978, 1155, 1242, 1623
SatI	GCNGC	4 cut(s)	809, 872, 1485, 1574
SchI	GAGTC	3 cut(s)	1102, 1328, 1465
ScrFI	CCNGG	2 cut(s)	128, 159
SduI	GDGCHC	1 cut(s)	1383
SfaNI	GCATC	4 cut(s)	376, 522, 703, 1222
Sfr274I	CTCGAG	1 cut(s)	406
SfuI	TTCGAA	2 cut(s)	303, 450
SlaI	CTCGAG	1 cut(s)	406
SmiMI	CAYNNNNRTG	3 cut(s)	1041, 1354, 1616
SmlI	CTYRAG	6 cut(s)	406, 462, 483, 962, 1241, 1559
SmoI	CTYRAG	6 cut(s)	406, 462, 483, 962, 1241, 1559
SseBI	AGGCCT	1 cut(s)	1692
SsiI	CCGC	6 cut(s)	33, 374, 642, 983, 1337, 1636
SspI	AATATT	2 cut(s)	616, 1225
SspMI	CTAG	2 cut(s)	75, 291
StuI	AGGCCT	1 cut(s)	1692
StyD4I	CCNGG	2 cut(s)	126, 157
TaaI	ACNGT	3 cut(s)	86, 107, 513
TaiI	ACGT	2 cut(s)	357, 1191
TaqI	TCGA	9 cut(s)	205, 303, 407, 450, 526, 558, 660, 1185, 1193
TaqII	GACCGA	1 cut(s)	544
TatI	WGTACW	2 cut(s)	244, 1067
TfiI	GAWTC	2 cut(s)	123, 131
Tru1I	TTAA	6 cut(s)	707, 741, 978, 1155, 1242, 1623
Tru9I	TTAA	6 cut(s)	707, 741, 978, 1155, 1242, 1623
TscAI	CASTG	1 cut(s)	1482
TseFI	GTSAC	2 cut(s)	350, 1093
TseI	GCWGC	4 cut(s)	808, 871, 1484, 1573
Tsp45I	GTSAC	2 cut(s)	350, 1093
TspDTI	ATGAA	8 cut(s)	104, 396, 881, 1045, 1093, 1217, 1220, 1287
TspGWI	ACGGA	2 cut(s)	35, 851
TspRI	CASTG	1 cut(s)	1482
Tth111I	GACNNNGTC	1 cut(s)	1318
Van91I	CCANNNNNTGG	1 cut(s)	431
Vha464I	CTTAAG	1 cut(s)	1241
XapI	RAATTY	5 cut(s)	343, 445, 957, 1158, 1521
XceI	RCATGY	2 cut(s)	900, 1068
XhoI	CTCGAG	1 cut(s)	406
XspI	CTAG	2 cut(s)	75, 291
ZraI	GACGTC	1 cut(s)	1189
Zsp2I	ATGCAT	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.