Rroxscaffold_2G00144160

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0010681
Physical Location & Seq
Forward (+)
82118632 .. 82124416
5785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00144160.1

Sequence Viewer

Length: 1548 bp
ATGGCGATCGACGAGGACTTGGAGAGCTGCGGCAGCAGAGCCGCCGCGTTCTCGTCGCAGGCGCAGGCGCAGGCGCAGCCTCGCCACCAGCGGCAGAAGCTCGAGGTCTACAACGAGGTGCTGAGGAGAATTCAGGAGTTCAATTATGAGGAGGCCAGTCTTCCTGGATTTGATGATCAGCTTTGGCTCCATTTCAATCGATTGCCTGCTCGATACGCGTTGGATGTGAATGTGGAGAGGGCAGAGGATGTGCTTACACATAAGAGATTGCTGCAACTTGCAGAGGACCCTGCTTACCAACCCGCTTTTGAAGTTCGCACTGTGCAGGTTTATCCTGTGTACAATGGGATTCCTGGTGATTCGGTCCATTCAGATTCTTCAATGAAAGAAGATGCACAAAGTTCTTTTAATTATAACAGACAAGGGATTCATCCACCACCTACCTTTGGTTCGTCTCCTAATCTCGAGGCACTTTCACTTCTAGCCAATAGATCCCATGTTGATGATGGAGACAGTGCAATGAGCGTAACACCCTATGTTTCTAGGCCTATGCATGAGATCACTTTTTCAACAGTTGACAAGCCTAAACTTCTTAGTCAGTTAACTTCATTGCTTGCTGATATTGGACTGAATATTCAAGAAGCTCATGCCTTTTCCACTGTTGATGGATTTTCTCTGGATGTTTTCGTAGTTGATGGTTGGCACTTAGAGGAAACTGAAGAACTTAAAAGGGTGTTGGAGAAGGAAATTTCAAAATTTAAGGAGTCAAAGCAGTATCCAGTTGCTGCAATTAGCGAGGATAACCAAATAAAAATTGAGTCTTCACCCGACGCCCTGCAAATACCAACTGATGGTATAGATGTATGGGAGATTGACACAAGGCAGCTGAAATTTGAGAACAAAGTTGGATCTGGATCATTCGGTGATCTGTACAGAGGCACATATTGTAGTCAGGAAGTTGCCATCAAAGTTTTAAAACCTGAGCGTGTCAATGCAGAGATGCTGAGGGATTTTTCACAGGAAGTTTATATACTGAGGAAAATTCGGCACAAGAATGTTGTGCAATTTATTGGTGCATGTACACAACCTCCAAACATATGCATTGTGACCGAGTTTATGTCCAGGGGAAGTGTATATGACTTTCTGCATAAACAAAAGGGTGTGTTCAAGCTTCCGTCTCTGCTCAAAGTAGCAATTGATGTTTCGAAGGGAATGAATTATTTGCACCAAAATAATATAGTCCACAGAGACCTTAAGACTGCCAATCTTCTGATGGATGAACACGAACTCCCCTACTCATCCTTGACCCCATTACAAGCAGCAGTGGGTGTGGTACAAAAGGCATTACGACCTACAATCCCAAAGAATACTCACCCAAAGTTTGCAGAAGTGCTTGAGAGATGCTGGCAGCAAGACCCAACTCAAAGACCTGACTTCTCTGAGATTGTGGAAATTCTTCAACATTTGGCCAAGGAGGTGGGAAATGAGGATGAAGACCGACACAAGGATAAGTCATTTTTCTCAGCGCTGAGATGGGGCCATCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

515

Amino Acids

58.51

Weight (kDa)

5.54

Isoelectric Point (pI)

51.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 296 - 428 5e-37 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 298 - 428 3.4e-30 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 429 - 486 5.9e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010681)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17700 AT4G35780
fragaria_vesca FvH4_1g10940 FvH4_1g10940 FvH4_1g10940
malus_domestica MD02G1122500.v1.1 MD15G1236700.v1.1
prunus_persica Prupe.7G176000_v2.0.a1
pyrus_communis pycom02g09550 pycom15g21040
rosa_chinensis RchiOBHm_Chr2g0098201
rosa_laevigata RLG00000016776
rosa_multiflora Rmu_sc0009178.1_g000003
rosa_roxburghii Rroxscaffold_2G00144160
rosa_rugosa Rorug02G0071100 Rorug02G0071200.1
rosa_samantha Rh2AG118300 Rh2BG121300 Rh2DG123000
rosa_wichuraiana Rw2G009270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 414
Acc36I ACCTGC 1 cut(s) 316
AccB7I CCANNNNNTGG 1 cut(s) 851
AccI GTMKAC 1 cut(s) 108
AccII CGCG 2 cut(s) 47, 218
AciI CCGC 5 cut(s) 30, 42, 45, 91, 303
AclWI GGATC 3 cut(s) 486, 916, 922
AcoI YGGCCR 1 cut(s) 1467
AcsI RAATTY 6 cut(s) 129, 747, 755, 890, 1041, 1452
AcuI CTGAAG 1 cut(s) 738
AcyI GRCGYC 1 cut(s) 831
AfaI GTAC 4 cut(s) 341, 932, 1081, 1335
AfeI AGCGCT 1 cut(s) 1527
AfiI CCNNNNNNNGG 3 cut(s) 446, 851, 1504
AflII CTTAAG 1 cut(s) 1253
AflIII ACRYGT 1 cut(s) 216
AgsI TTSAA 9 cut(s) 142, 196, 311, 381, 570, 638, 753, 1168, 1460
AjnI CCWGG 3 cut(s) 163, 352, 1121
AloI GAACNNNNNNTCC 2 cut(s) 1272, 1304
AluBI AGCT 6 cut(s) 27, 100, 181, 644, 886, 1171
AluI AGCT 6 cut(s) 27, 100, 181, 644, 886, 1171
Alw26I GTCTC 4 cut(s) 459, 504, 1182, 1242
AlwI GGATC 3 cut(s) 486, 916, 922
AlwNI CAGNNNCTG 1 cut(s) 785
Ama87I CYCGRG 2 cut(s) 101, 464
Aor51HI AGCGCT 1 cut(s) 1527
AoxI GGCC 4 cut(s) 153, 545, 1467, 1537
ApeKI GCWGC 8 cut(s) 27, 33, 76, 271, 785, 883, 1319, 1408
ApoI RAATTY 6 cut(s) 129, 747, 755, 890, 1041, 1452
Asp700I GAANNNNTTC 1 cut(s) 1455
AspLEI GCGC 4 cut(s) 64, 70, 76, 1528
AspS9I GGNCC 3 cut(s) 286, 364, 1537
AsuHPI GGTGA 4 cut(s) 368, 816, 935, 1364
AsuII TTCGAA 1 cut(s) 1205
AvaI CYCGRG 2 cut(s) 101, 464
AvaII GGWCC 2 cut(s) 286, 364
BalI TGGCCA 1 cut(s) 1469
BarI GAAGNNNNNNTAC 2 cut(s) 1014, 1046
BbsI GAAGAC 3 cut(s) 152, 813, 1500
BbvCI CCTCAGC 2 cut(s) 122, 1004
BbvI GCAGC 8 cut(s) 14, 45, 88, 258, 772, 895, 1331, 1420
BccI CCATC 7 cut(s) 500, 659, 689, 845, 971, 1267, 1527
BciT130I CCWGG 3 cut(s) 165, 354, 1123
BciVI GTATCC 1 cut(s) 786
BclI TGATCA 1 cut(s) 175
BcoDI GTCTC 4 cut(s) 459, 504, 1182, 1242
BfaI CTAG 2 cut(s) 482, 543
BfoI RGCGCY 1 cut(s) 1529
BfrI CTTAAG 1 cut(s) 1253
BfuAI ACCTGC 1 cut(s) 316
BfuI GTATCC 1 cut(s) 786
Bme1390I CCNGG 3 cut(s) 165, 354, 1123
Bme18I GGWCC 2 cut(s) 286, 364
BmeT110I CYCGRG 2 cut(s) 101, 464
BmgT120I GGNCC 3 cut(s) 286, 364, 1537
BmiI GGNNCC 3 cut(s) 188, 288, 1538
BmrFI CCNGG 3 cut(s) 165, 354, 1123
BmsI GCATC 3 cut(s) 382, 990, 1391
BpiI GAAGAC 3 cut(s) 152, 813, 1500
Bpu10I CCTNAGC 3 cut(s) 122, 981, 1004
Bpu14I TTCGAA 1 cut(s) 1205
BpuEI CTTGAG 1 cut(s) 1415
Bsa29I ATCGAT 1 cut(s) 199
BsaBI GATNNNNATC 1 cut(s) 913
BsaHI GRCGYC 1 cut(s) 831
BsaI GGTCTC 1 cut(s) 1242
BsaJI CCNNGG 2 cut(s) 1122, 1470
BsaXI ACNNNNNCTCC 4 cut(s) 1072, 1102, 1272, 1302
Bsc4I CCNNNNNNNGG 3 cut(s) 446, 851, 1504
Bse1I ACTGG 2 cut(s) 156, 779
Bse3DI GCAATG 2 cut(s) 525, 608
Bse8I GATNNNNATC 1 cut(s) 913
BseBI CCWGG 3 cut(s) 165, 354, 1123
BseCI ATCGAT 1 cut(s) 199
BseDI CCNNGG 2 cut(s) 1122, 1470
BseGI GGATG 7 cut(s) 229, 253, 430, 685, 1282, 1298, 1495
BseJI GATNNNNATC 1 cut(s) 913
BseLI CCNNNNNNNGG 3 cut(s) 446, 851, 1504
BseMI GCAATG 2 cut(s) 525, 608
BseMII CTCAG 7 cut(s) 113, 972, 995, 1025, 1431, 1520, 1536
BseNI ACTGG 2 cut(s) 156, 779
BseRI GAGGAG 2 cut(s) 139, 164
BseXI GCAGC 8 cut(s) 14, 45, 88, 258, 772, 895, 1331, 1420
BsgI GTGCAG 1 cut(s) 344
Bsh1236I CGCG 2 cut(s) 47, 218
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 4 cut(s) 155, 547, 1469, 1539
BshVI ATCGAT 1 cut(s) 199
BsiEI CGRYCG 1 cut(s) 9
BsiHKCI CYCGRG 2 cut(s) 101, 464
BslI CCNNNNNNNGG 3 cut(s) 446, 851, 1504
BsmAI GTCTC 4 cut(s) 459, 504, 1182, 1242
BsmBI CGTCTC 2 cut(s) 459, 1182
BsnI GGCC 4 cut(s) 155, 547, 1469, 1539
Bso31I GGTCTC 1 cut(s) 1242
BsoBI CYCGRG 2 cut(s) 101, 464
Bsp119I TTCGAA 1 cut(s) 1205
Bsp1407I TGTACA 3 cut(s) 339, 930, 1079
Bsp143I GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
BspACI CCGC 5 cut(s) 30, 42, 45, 91, 303
BspANI GGCC 4 cut(s) 155, 547, 1469, 1539
BspCNI CTCAG 7 cut(s) 114, 973, 996, 1026, 1432, 1521, 1535
BspDI ATCGAT 1 cut(s) 199
BspFNI CGCG 2 cut(s) 47, 218
BspLI GGNNCC 3 cut(s) 188, 288, 1538
BspMI ACCTGC 1 cut(s) 316
BspPI GGATC 3 cut(s) 486, 916, 922
BspT104I TTCGAA 1 cut(s) 1205
BspTI CTTAAG 1 cut(s) 1253
BspTNI GGTCTC 1 cut(s) 1242
BsrDI GCAATG 2 cut(s) 525, 608
BsrGI TGTACA 3 cut(s) 339, 930, 1079
BsrI ACTGG 2 cut(s) 156, 779
BssECI CCNNGG 2 cut(s) 1122, 1470
BssMI GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
BssNI GRCGYC 1 cut(s) 831
BssT1I CCWWGG 1 cut(s) 1470
Bst2UI CCWGG 3 cut(s) 165, 354, 1123
Bst4CI ACNGT 4 cut(s) 322, 515, 574, 661
BstACI GRCGYC 1 cut(s) 831
BstAFI CTTAAG 1 cut(s) 1253
BstAUI TGTACA 3 cut(s) 339, 930, 1079
BstBI TTCGAA 1 cut(s) 1205
BstC8I GCNNGC 6 cut(s) 60, 66, 72, 207, 615, 1406
BstDEI CTNAG 9 cut(s) 122, 593, 706, 981, 1004, 1034, 1440, 1522, 1529
BstF5I GGATG 7 cut(s) 229, 253, 430, 685, 1282, 1298, 1495
BstFNI CGCG 2 cut(s) 47, 218
BstH2I RGCGCY 1 cut(s) 1529
BstHHI GCGC 4 cut(s) 64, 70, 76, 1528
BstKTI GATC 7 cut(s) 9, 178, 494, 561, 911, 917, 928
BstMAI GTCTC 4 cut(s) 459, 504, 1182, 1242
BstMBI GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 4 cut(s) 33, 76, 97, 215
BstNI CCWGG 3 cut(s) 165, 354, 1123
BstNSI RCATGY 1 cut(s) 1080
BstSCI CCNGG 3 cut(s) 163, 352, 1121
BstUI CGCG 2 cut(s) 47, 218
BstV1I GCAGC 8 cut(s) 14, 45, 88, 258, 772, 895, 1331, 1420
BstV2I GAAGAC 3 cut(s) 152, 813, 1500
BstX2I RGATCY 2 cut(s) 491, 908
BstXI CCANNNNNNTGG 1 cut(s) 1477
BstYI RGATCY 2 cut(s) 491, 908
Bsu15I ATCGAT 1 cut(s) 199
BsuI GTATCC 1 cut(s) 786
BsuRI GGCC 4 cut(s) 155, 547, 1469, 1539
BsuTUI ATCGAT 1 cut(s) 199
BtsCI GGATG 7 cut(s) 229, 253, 430, 685, 1282, 1298, 1495
BtsI GCAGTG 1 cut(s) 1329
BtsIMutI CAGTG 4 cut(s) 318, 520, 657, 1329
BveI ACCTGC 1 cut(s) 316
Cac8I GCNNGC 6 cut(s) 60, 66, 72, 207, 615, 1406
CaiI CAGNNNCTG 1 cut(s) 785
CfoI GCGC 4 cut(s) 64, 70, 76, 1528
Cfr13I GGNCC 3 cut(s) 286, 364, 1537
ClaI ATCGAT 1 cut(s) 199
CseI GACGC 1 cut(s) 839
Csp6I GTAC 4 cut(s) 340, 931, 1080, 1334
CviAII CATG 4 cut(s) 497, 554, 647, 1077
CviQI GTAC 4 cut(s) 340, 931, 1080, 1334
DdeI CTNAG 9 cut(s) 122, 593, 706, 981, 1004, 1034, 1440, 1522, 1529
DpnI GATC 7 cut(s) 8, 177, 493, 560, 910, 916, 927
DpnII GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
DraI TTTAAA 1 cut(s) 975
EaeI YGGCCR 1 cut(s) 1467
Eco130I CCWWGG 1 cut(s) 1470
Eco147I AGGCCT 1 cut(s) 547
Eco31I GGTCTC 1 cut(s) 1242
Eco47I GGWCC 2 cut(s) 286, 364
Eco47III AGCGCT 1 cut(s) 1527
Eco57I CTGAAG 1 cut(s) 738
Eco88I CYCGRG 2 cut(s) 101, 464
EcoO109I RGGNCCY 1 cut(s) 286
EcoRI GAATTC 1 cut(s) 129
EcoRII CCWGG 3 cut(s) 163, 352, 1121
EcoT14I CCWWGG 1 cut(s) 1470
EcoT22I ATGCAT 2 cut(s) 555, 1103
ErhI CCWWGG 1 cut(s) 1470
Esp3I CGTCTC 2 cut(s) 459, 1182
FaeI CATG 4 cut(s) 500, 557, 650, 1080
FatI CATG 4 cut(s) 496, 553, 646, 1076
FauI CCCGC 1 cut(s) 310
FauNDI CATATG 1 cut(s) 1097
FbaI TGATCA 1 cut(s) 175
FblI GTMKAC 1 cut(s) 108
FokI GGATG 7 cut(s) 236, 260, 417, 692, 1285, 1289, 1502
FspBI CTAG 2 cut(s) 482, 543
GlaI GCGC 4 cut(s) 63, 69, 75, 1527
HaeII RGCGCY 1 cut(s) 1529
HaeIII GGCC 4 cut(s) 155, 547, 1469, 1539
HgaI GACGC 1 cut(s) 839
HhaI GCGC 4 cut(s) 64, 70, 76, 1528
Hin1I GRCGYC 1 cut(s) 831
Hin1II CATG 4 cut(s) 500, 557, 650, 1080
Hin6I GCGC 4 cut(s) 62, 68, 74, 1526
HinP1I GCGC 4 cut(s) 62, 68, 74, 1526
HincII GTYRAC 2 cut(s) 577, 603
HindII GTYRAC 2 cut(s) 577, 603
HindIII AAGCTT 1 cut(s) 1169
HinfI GANTC 6 cut(s) 349, 359, 374, 427, 764, 818
HpaI GTTAAC 1 cut(s) 603
HphI GGTGA 4 cut(s) 368, 816, 935, 1364
Hpy166II GTNNAC 6 cut(s) 109, 340, 577, 603, 1082, 1243
Hpy188I TCNGA 3 cut(s) 373, 1272, 1441
Hpy188III TCNNGA 6 cut(s) 134, 464, 638, 677, 912, 953
Hpy8I GTNNAC 6 cut(s) 109, 340, 577, 603, 1082, 1243
Hpy99I CGWCG 3 cut(s) 14, 58, 833
HpyAV CCTTC 2 cut(s) 736, 1201
HpyCH4III ACNGT 4 cut(s) 322, 515, 574, 661
HpyF10VI GCNNNNNNNGC 4 cut(s) 33, 76, 97, 215
HpyF3I CTNAG 9 cut(s) 122, 593, 706, 981, 1004, 1034, 1440, 1522, 1529
Hsp92I GRCGYC 1 cut(s) 831
Hsp92II CATG 4 cut(s) 500, 557, 650, 1080
HspAI GCGC 4 cut(s) 62, 68, 74, 1526
Ksp22I TGATCA 1 cut(s) 175
KspAI GTTAAC 1 cut(s) 603
Kzo9I GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
LmnI GCTCC 1 cut(s) 192
Lsp1109I GCAGC 8 cut(s) 14, 45, 88, 258, 772, 895, 1331, 1420
LweI GCATC 3 cut(s) 382, 990, 1391
MaeI CTAG 2 cut(s) 482, 543
MaeIII GTNAC 2 cut(s) 526, 1105
MalI GATC 7 cut(s) 8, 177, 493, 560, 910, 916, 927
MboI GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
MboII GAAGA 8 cut(s) 152, 369, 401, 731, 813, 1259, 1448, 1505
MfeI CAATTG 1 cut(s) 1194
MflI RGATCY 2 cut(s) 491, 908
MlsI TGGCCA 1 cut(s) 1469
MluI ACGCGT 1 cut(s) 216
MluNI TGGCCA 1 cut(s) 1469
MlyI GAGTC 2 cut(s) 773, 827
MmeI TCCRAC 3 cut(s) 201, 717, 886
Mox20I TGGCCA 1 cut(s) 1469
Mph1103I ATGCAT 2 cut(s) 555, 1103
MroXI GAANNNNTTC 1 cut(s) 1455
MscI TGGCCA 1 cut(s) 1469
MseI TTAA 6 cut(s) 408, 602, 726, 759, 974, 1254
MslI CAYNNNNRTG 2 cut(s) 501, 1053
Msp20I TGGCCA 1 cut(s) 1469
MspA1I CMGCKG 2 cut(s) 91, 886
MspCI CTTAAG 1 cut(s) 1253
MspR9I CCNGG 3 cut(s) 165, 354, 1123
MunI CAATTG 1 cut(s) 1194
MvaI CCWGG 3 cut(s) 165, 354, 1123
MvnI CGCG 2 cut(s) 47, 218
MwoI GCNNNNNNNGC 4 cut(s) 33, 76, 97, 215
NdeI CATATG 1 cut(s) 1097
NdeII GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
NlaIII CATG 4 cut(s) 500, 557, 650, 1080
NlaIV GGNNCC 3 cut(s) 188, 288, 1538
NmuCI GTSAC 1 cut(s) 1105
NsiI ATGCAT 2 cut(s) 555, 1103
NspI RCATGY 1 cut(s) 1080
NspV TTCGAA 1 cut(s) 1205
PaeR7I CTCGAG 2 cut(s) 101, 464
PceI AGGCCT 1 cut(s) 547
PdmI GAANNNNTTC 1 cut(s) 1455
PfeI GAWTC 4 cut(s) 349, 359, 374, 427
PflMI CCANNNNNTGG 1 cut(s) 851
PfoI TCCNGGA 1 cut(s) 163
Ple19I CGATCG 1 cut(s) 9
PleI GAGTC 2 cut(s) 772, 826
PpsI GAGTC 2 cut(s) 772, 826
PpuMI RGGWCCY 1 cut(s) 286
PsiI TTATAA 1 cut(s) 414
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 3 cut(s) 163, 352, 1121
PspGI CCWGG 3 cut(s) 163, 352, 1121
PspN4I GGNNCC 3 cut(s) 188, 288, 1538
PspPI GGNCC 3 cut(s) 286, 364, 1537
PspPPI RGGWCCY 1 cut(s) 286
PspXI VCTCGAGB 1 cut(s) 101
PstNI CAGNNNCTG 1 cut(s) 785
PsuI RGATCY 2 cut(s) 491, 908
PvuI CGATCG 1 cut(s) 9
PvuII CAGCTG 1 cut(s) 886
RsaI GTAC 4 cut(s) 341, 932, 1081, 1335
RsaNI GTAC 4 cut(s) 340, 931, 1080, 1334
RseI CAYNNNNRTG 2 cut(s) 501, 1053
SaqAI TTAA 6 cut(s) 408, 602, 726, 759, 974, 1254
Sau3AI GATC 7 cut(s) 6, 175, 491, 558, 908, 914, 925
Sau96I GGNCC 3 cut(s) 286, 364, 1537
SchI GAGTC 2 cut(s) 773, 827
ScrFI CCNGG 3 cut(s) 165, 354, 1123
SfaNI GCATC 3 cut(s) 382, 990, 1391
Sfr274I CTCGAG 2 cut(s) 101, 464
SfuI TTCGAA 1 cut(s) 1205
SinI GGWCC 2 cut(s) 286, 364
SlaI CTCGAG 2 cut(s) 101, 464
SmiMI CAYNNNNRTG 2 cut(s) 501, 1053
SmlI CTYRAG 4 cut(s) 101, 464, 1253, 1394
SmoI CTYRAG 4 cut(s) 101, 464, 1253, 1394
SseBI AGGCCT 1 cut(s) 547
SsiI CCGC 5 cut(s) 30, 42, 45, 91, 303
SspI AATATT 1 cut(s) 634
SspMI CTAG 2 cut(s) 482, 543
StuI AGGCCT 1 cut(s) 547
StyD4I CCNGG 3 cut(s) 163, 352, 1121
StyI CCWWGG 1 cut(s) 1470
TaaI ACNGT 4 cut(s) 322, 515, 574, 661
TaqI TCGA 6 cut(s) 9, 102, 199, 211, 465, 1205
TaqII GACCGA 3 cut(s) 352, 1124, 1512
TatI WGTACW 3 cut(s) 339, 930, 1079
TauI GCSGC 4 cut(s) 33, 44, 47, 94
TfiI GAWTC 4 cut(s) 349, 359, 374, 427
Tru1I TTAA 6 cut(s) 408, 602, 726, 759, 974, 1254
Tru9I TTAA 6 cut(s) 408, 602, 726, 759, 974, 1254
TscAI CASTG 4 cut(s) 325, 520, 664, 1329
TseFI GTSAC 1 cut(s) 1105
TseI GCWGC 8 cut(s) 27, 33, 76, 271, 785, 883, 1319, 1408
Tsp45I GTSAC 1 cut(s) 1105
TspDTI ATGAA 6 cut(s) 398, 419, 597, 1229, 1293, 1506
TspGWI ACGGA 1 cut(s) 1164
TspRI CASTG 4 cut(s) 325, 520, 664, 1329
Van91I CCANNNNNTGG 1 cut(s) 851
Vha464I CTTAAG 1 cut(s) 1253
VpaK11BI GGWCC 2 cut(s) 286, 364
XapI RAATTY 6 cut(s) 129, 747, 755, 890, 1041, 1452
XceI RCATGY 1 cut(s) 1080
XcmI CCANNNNNNNNNTGG 2 cut(s) 503, 1270
XhoI CTCGAG 2 cut(s) 101, 464
XmiI GTMKAC 1 cut(s) 108
XmnI GAANNNNTTC 1 cut(s) 1455
XspI CTAG 2 cut(s) 482, 543
Zsp2I ATGCAT 2 cut(s) 555, 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.