C2HE / C2H2 / C2HC zinc-binding finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G01305 |
| fragaria_vesca | FvH4_6g11070 |
| malus_domestica | MD04G1161800.v1.1 MD12G1174500.v1.1 |
| prunus_persica | Prupe.6G281600_v2.0.a1 |
| pyrus_communis | pycom04g14470 |
| rosa_chinensis | RchiOBHm_Chr3g0462431 |
| rosa_laevigata | RLG00000024861 |
| rosa_multiflora | Rmu_co8365921.1_g000001 Rmu_sc0003850.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00417520 |
| rosa_rugosa | Rorug03G0056500 |
| rosa_samantha | Rh3AG114900 Rh3BG118300 Rh3CG121100 Rh3DG120300 |
| rosa_wichuraiana | Rw3G009730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 168 |
| AccI | GTMKAC | 1 cut(s) | 464 |
| AccII | CGCG | 1 cut(s) | 159 |
| AciI | CCGC | 2 cut(s) | 152, 452 |
| AcsI | RAATTY | 1 cut(s) | 368 |
| AfaI | GTAC | 1 cut(s) | 346 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 362, 415, 476 |
| AgsI | TTSAA | 3 cut(s) | 13, 190, 277 |
| AjnI | CCWGG | 1 cut(s) | 211 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 291, 323 |
| AluBI | AGCT | 1 cut(s) | 261 |
| AluI | AGCT | 1 cut(s) | 261 |
| ApoI | RAATTY | 1 cut(s) | 368 |
| AspLEI | GCGC | 1 cut(s) | 362 |
| AspS9I | GGNCC | 3 cut(s) | 136, 208, 374 |
| AsuC2I | CCSGG | 1 cut(s) | 357 |
| AsuHPI | GGTGA | 1 cut(s) | 287 |
| AvaII | GGWCC | 3 cut(s) | 136, 208, 374 |
| BanI | GGYRCC | 1 cut(s) | 168 |
| BccI | CCATC | 1 cut(s) | 220 |
| BceAI | ACGGC | 2 cut(s) | 182, 454 |
| BciT130I | CCWGG | 1 cut(s) | 213 |
| BcnI | CCSGG | 1 cut(s) | 357 |
| BfaI | CTAG | 1 cut(s) | 514 |
| BfoI | RGCGCY | 1 cut(s) | 363 |
| BglII | AGATCT | 1 cut(s) | 285 |
| BisI | GCNGC | 1 cut(s) | 153 |
| BlsI | GCNGC | 1 cut(s) | 154 |
| Bme1390I | CCNGG | 2 cut(s) | 213, 357 |
| Bme18I | GGWCC | 3 cut(s) | 136, 208, 374 |
| BmgT120I | GGNCC | 3 cut(s) | 136, 208, 374 |
| BmiI | GGNNCC | 3 cut(s) | 138, 170, 210 |
| BmrFI | CCNGG | 2 cut(s) | 213, 357 |
| BpmI | CTGGAG | 1 cut(s) | 384 |
| BpuMI | CCSGG | 1 cut(s) | 357 |
| BsaBI | GATNNNNATC | 1 cut(s) | 12 |
| BsaJI | CCNNGG | 2 cut(s) | 211, 470 |
| BsaWI | WCCGGW | 1 cut(s) | 92 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 337, 367 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 362, 415, 476 |
| Bse8I | GATNNNNATC | 1 cut(s) | 12 |
| BseBI | CCWGG | 1 cut(s) | 213 |
| BseDI | CCNNGG | 2 cut(s) | 211, 470 |
| BseGI | GGATG | 3 cut(s) | 10, 41, 56 |
| BseJI | GATNNNNATC | 1 cut(s) | 12 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 362, 415, 476 |
| BseMII | CTCAG | 2 cut(s) | 155, 296 |
| Bsh1236I | CGCG | 1 cut(s) | 159 |
| Bsh1285I | CGRYCG | 1 cut(s) | 184 |
| BshNI | GGYRCC | 1 cut(s) | 168 |
| BsiEI | CGRYCG | 1 cut(s) | 184 |
| BsiSI | CCGG | 2 cut(s) | 93, 357 |
| BslFI | GGGAC | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 362, 415, 476 |
| BsmFI | GGGAC | 1 cut(s) | 194 |
| Bsp143I | GATC | 1 cut(s) | 285 |
| Bsp68I | TCGCGA | 1 cut(s) | 159 |
| BspACI | CCGC | 2 cut(s) | 152, 452 |
| BspCNI | CTCAG | 2 cut(s) | 154, 295 |
| BspFNI | CGCG | 1 cut(s) | 159 |
| BspLI | GGNNCC | 3 cut(s) | 138, 170, 210 |
| BspT107I | GGYRCC | 1 cut(s) | 168 |
| BssECI | CCNNGG | 2 cut(s) | 211, 470 |
| BssMI | GATC | 1 cut(s) | 285 |
| BssNAI | GTATAC | 1 cut(s) | 465 |
| Bst1107I | GTATAC | 1 cut(s) | 465 |
| Bst2UI | CCWGG | 1 cut(s) | 213 |
| Bst4CI | ACNGT | 5 cut(s) | 77, 108, 185, 235, 448 |
| Bst6I | CTCTTC | 2 cut(s) | 67, 317 |
| BstC8I | GCNNGC | 2 cut(s) | 157, 437 |
| BstDEI | CTNAG | 2 cut(s) | 141, 282 |
| BstDSI | CCRYGG | 1 cut(s) | 470 |
| BstF5I | GGATG | 3 cut(s) | 10, 41, 56 |
| BstFNI | CGCG | 1 cut(s) | 159 |
| BstH2I | RGCGCY | 1 cut(s) | 363 |
| BstHHI | GCGC | 1 cut(s) | 362 |
| BstKTI | GATC | 1 cut(s) | 288 |
| BstMBI | GATC | 1 cut(s) | 285 |
| BstMCI | CGRYCG | 1 cut(s) | 184 |
| BstNI | CCWGG | 1 cut(s) | 213 |
| BstNSI | RCATGY | 1 cut(s) | 307 |
| BstSCI | CCNGG | 2 cut(s) | 211, 355 |
| BstUI | CGCG | 1 cut(s) | 159 |
| BstX2I | RGATCY | 1 cut(s) | 285 |
| BstYI | RGATCY | 1 cut(s) | 285 |
| BstZ17I | GTATAC | 1 cut(s) | 465 |
| BtgI | CCRYGG | 1 cut(s) | 470 |
| BtsCI | GGATG | 3 cut(s) | 10, 41, 56 |
| BtsIMutI | CAGTG | 1 cut(s) | 231 |
| BtuMI | TCGCGA | 1 cut(s) | 159 |
| Cac8I | GCNNGC | 2 cut(s) | 157, 437 |
| CfoI | GCGC | 1 cut(s) | 362 |
| Cfr13I | GGNCC | 3 cut(s) | 136, 208, 374 |
| Csp6I | GTAC | 1 cut(s) | 345 |
| CviAII | CATG | 2 cut(s) | 205, 304 |
| CviJI | RGCY | 4 cut(s) | 155, 254, 261, 281 |
| CviKI_1 | RGCY | 4 cut(s) | 155, 254, 261, 281 |
| CviQI | GTAC | 1 cut(s) | 345 |
| DdeI | CTNAG | 2 cut(s) | 141, 282 |
| DpnI | GATC | 1 cut(s) | 287 |
| DpnII | GATC | 1 cut(s) | 285 |
| Eam1104I | CTCTTC | 2 cut(s) | 67, 317 |
| EarI | CTCTTC | 2 cut(s) | 67, 317 |
| Eco47I | GGWCC | 3 cut(s) | 136, 208, 374 |
| EcoRII | CCWGG | 1 cut(s) | 211 |
| FaeI | CATG | 2 cut(s) | 208, 307 |
| FaiI | YATR | 9 cut(s) | 206, 242, 305, 317, 393, 405, 413, 424, 465 |
| FaqI | GGGAC | 1 cut(s) | 194 |
| FatI | CATG | 2 cut(s) | 204, 303 |
| FblI | GTMKAC | 1 cut(s) | 464 |
| Fnu4HI | GCNGC | 1 cut(s) | 153 |
| FokI | GGATG | 3 cut(s) | 17, 28, 43 |
| Fsp4HI | GCNGC | 1 cut(s) | 153 |
| FspBI | CTAG | 1 cut(s) | 514 |
| GlaI | GCGC | 1 cut(s) | 361 |
| GluI | GCNGC | 1 cut(s) | 153 |
| GsuI | CTGGAG | 1 cut(s) | 384 |
| HaeII | RGCGCY | 1 cut(s) | 363 |
| HapII | CCGG | 2 cut(s) | 93, 357 |
| HhaI | GCGC | 1 cut(s) | 362 |
| Hin1II | CATG | 2 cut(s) | 208, 307 |
| Hin6I | GCGC | 1 cut(s) | 360 |
| HinP1I | GCGC | 1 cut(s) | 360 |
| HincII | GTYRAC | 1 cut(s) | 117 |
| HindII | GTYRAC | 1 cut(s) | 117 |
| HinfI | GANTC | 2 cut(s) | 455, 506 |
| HpaII | CCGG | 2 cut(s) | 93, 357 |
| HphI | GGTGA | 1 cut(s) | 287 |
| Hpy166II | GTNNAC | 3 cut(s) | 117, 123, 465 |
| Hpy188I | TCNGA | 2 cut(s) | 144, 285 |
| Hpy188III | TCNNGA | 3 cut(s) | 158, 190, 274 |
| Hpy8I | GTNNAC | 3 cut(s) | 117, 123, 465 |
| Hpy99I | CGWCG | 1 cut(s) | 136 |
| HpyAV | CCTTC | 1 cut(s) | 271 |
| HpyCH4III | ACNGT | 5 cut(s) | 77, 108, 185, 235, 448 |
| HpyCH4IV | ACGT | 4 cut(s) | 119, 125, 264, 502 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 282 |
| HpySE526I | ACGT | 4 cut(s) | 119, 125, 264, 502 |
| Hsp92II | CATG | 2 cut(s) | 208, 307 |
| HspAI | GCGC | 1 cut(s) | 360 |
| Kzo9I | GATC | 1 cut(s) | 285 |
| LpnPI | CCDG | 6 cut(s) | 106, 198, 225, 274, 348, 370 |
| MaeI | CTAG | 1 cut(s) | 514 |
| MaeII | ACGT | 4 cut(s) | 119, 125, 264, 502 |
| MaeIII | GTNAC | 2 cut(s) | 77, 503 |
| MalI | GATC | 1 cut(s) | 287 |
| MboI | GATC | 1 cut(s) | 285 |
| MboII | GAAGA | 4 cut(s) | 8, 54, 235, 304 |
| MflI | RGATCY | 1 cut(s) | 285 |
| MluCI | AATT | 3 cut(s) | 34, 174, 368 |
| MlyI | GAGTC | 2 cut(s) | 449, 500 |
| MnlI | CCTC | 4 cut(s) | 64, 70, 76, 150 |
| MspI | CCGG | 2 cut(s) | 93, 357 |
| MspR9I | CCNGG | 2 cut(s) | 213, 357 |
| MvaI | CCWGG | 1 cut(s) | 213 |
| MvnI | CGCG | 1 cut(s) | 159 |
| NciI | CCSGG | 1 cut(s) | 357 |
| NdeII | GATC | 1 cut(s) | 285 |
| NlaIII | CATG | 2 cut(s) | 208, 307 |
| NlaIV | GGNNCC | 3 cut(s) | 138, 170, 210 |
| NmuCI | GTSAC | 2 cut(s) | 77, 503 |
| NruI | TCGCGA | 1 cut(s) | 159 |
| NspI | RCATGY | 1 cut(s) | 307 |
| PkrI | GCNGC | 1 cut(s) | 154 |
| PleI | GAGTC | 2 cut(s) | 449, 500 |
| PpsI | GAGTC | 2 cut(s) | 449, 500 |
| Psp6I | CCWGG | 1 cut(s) | 211 |
| PspGI | CCWGG | 1 cut(s) | 211 |
| PspN4I | GGNNCC | 3 cut(s) | 138, 170, 210 |
| PspPI | GGNCC | 3 cut(s) | 136, 208, 374 |
| PsuI | RGATCY | 1 cut(s) | 285 |
| RruI | TCGCGA | 1 cut(s) | 159 |
| RsaI | GTAC | 1 cut(s) | 346 |
| RsaNI | GTAC | 1 cut(s) | 345 |
| SatI | GCNGC | 1 cut(s) | 153 |
| Sau3AI | GATC | 1 cut(s) | 285 |
| Sau96I | GGNCC | 3 cut(s) | 136, 208, 374 |
| SchI | GAGTC | 2 cut(s) | 449, 500 |
| ScrFI | CCNGG | 2 cut(s) | 213, 357 |
| SetI | ASST | 6 cut(s) | 116, 122, 128, 263, 267, 505 |
| SinI | GGWCC | 3 cut(s) | 136, 208, 374 |
| Sse9I | AATT | 3 cut(s) | 34, 174, 368 |
| SsiI | CCGC | 2 cut(s) | 152, 452 |
| SspMI | CTAG | 1 cut(s) | 514 |
| StyD4I | CCNGG | 2 cut(s) | 211, 355 |
| TaaI | ACNGT | 5 cut(s) | 77, 108, 185, 235, 448 |
| TaiI | ACGT | 4 cut(s) | 122, 128, 267, 505 |
| TaqI | TCGA | 2 cut(s) | 131, 458 |
| TaqII | GACCGA | 1 cut(s) | 391 |
| TasI | AATT | 3 cut(s) | 34, 174, 368 |
| TatI | WGTACW | 1 cut(s) | 344 |
| TauI | GCSGC | 1 cut(s) | 155 |
| TscAI | CASTG | 1 cut(s) | 238 |
| TseFI | GTSAC | 2 cut(s) | 77, 503 |
| Tsp45I | GTSAC | 2 cut(s) | 77, 503 |
| TspDTI | ATGAA | 2 cut(s) | 27, 304 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| TspRI | CASTG | 1 cut(s) | 238 |
| VpaK11BI | GGWCC | 3 cut(s) | 136, 208, 374 |
| XapI | RAATTY | 1 cut(s) | 368 |
| XceI | RCATGY | 1 cut(s) | 307 |
| XmiI | GTMKAC | 1 cut(s) | 464 |
| XspI | CTAG | 1 cut(s) | 514 |