BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11560 AT3G11560 AT3G11560 AT3G11560 AT3G11560 AT5G06220 AT5G06220 AT5G06220 |
| fragaria_vesca | FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 |
| malus_domestica | MD12G1031800.v1.1 MD14G1032100.v1.1 |
| prunus_persica | Prupe.7G100800_v2.0.a1 Prupe.7G100800_v2.0.a1 |
| pyrus_communis | pycom14g02890 |
| rosa_chinensis | RchiOBHm_Chr3g0474881 |
| rosa_laevigata | RLG00000023884 |
| rosa_multiflora | Rmu_co8463519.1_g000001 Rmu_sc0008866.1_g000001 Rmu_sc0022080.1_g000001 Rmu_sc0022081.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00406770 |
| rosa_rugosa | Rorug03G0145100 |
| rosa_samantha | Rh3AG194700 Rh3BG224500 Rh3CG219600 Rh3DG220200 |
| rosa_wichuraiana | Rw3G017720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 660 |
| AciI | CCGC | 5 cut(s) | 123, 622, 689, 866, 2342 |
| AclWI | GGATC | 1 cut(s) | 328 |
| AcoI | YGGCCR | 1 cut(s) | 20 |
| AcsI | RAATTY | 7 cut(s) | 127, 914, 980, 1391, 1673, 1792, 1801 |
| AcuI | CTGAAG | 5 cut(s) | 161, 270, 669, 2061, 2490 |
| AfaI | GTAC | 8 cut(s) | 33, 576, 1349, 1748, 1858, 2017, 2068, 2167 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 660, 1429, 1717, 2474 |
| AflIII | ACRYGT | 1 cut(s) | 2154 |
| AgsI | TTSAA | 5 cut(s) | 48, 389, 954, 1797, 2413 |
| AjiI | CACGTC | 1 cut(s) | 2155 |
| AjnI | CCWGG | 6 cut(s) | 131, 377, 443, 1428, 1873, 2374 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 841, 873 |
| Alw21I | GWGCWC | 4 cut(s) | 1199, 1552, 2096, 2208 |
| Alw26I | GTCTC | 3 cut(s) | 546, 1286, 2416 |
| AlwI | GGATC | 1 cut(s) | 328 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2195 |
| Ama87I | CYCGRG | 3 cut(s) | 1002, 1880, 2429 |
| AoxI | GGCC | 5 cut(s) | 20, 306, 844, 1358, 1876 |
| ApoI | RAATTY | 7 cut(s) | 127, 914, 980, 1391, 1673, 1792, 1801 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 713, 745 |
| AseI | ATTAAT | 1 cut(s) | 1121 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 354, 984 |
| AspS9I | GGNCC | 5 cut(s) | 306, 721, 845, 998, 1877 |
| AsuC2I | CCSGG | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 3 cut(s) | 359, 703, 1739 |
| AsuII | TTCGAA | 1 cut(s) | 1965 |
| AsuNHI | GCTAGC | 1 cut(s) | 281 |
| AvaI | CYCGRG | 3 cut(s) | 1002, 1880, 2429 |
| AvaII | GGWCC | 2 cut(s) | 721, 998 |
| BaeGI | GKGCMC | 2 cut(s) | 866, 1410 |
| BanII | GRGCYC | 3 cut(s) | 1552, 2096, 2208 |
| BbsI | GAAGAC | 3 cut(s) | 962, 1045, 1257 |
| Bbv12I | GWGCWC | 4 cut(s) | 1199, 1552, 2096, 2208 |
| BbvCI | CCTCAGC | 2 cut(s) | 1085, 1296 |
| BccI | CCATC | 5 cut(s) | 248, 901, 1316, 1496, 1538 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2059, 2093 |
| BciT130I | CCWGG | 6 cut(s) | 133, 379, 445, 1430, 1875, 2376 |
| BcnI | CCSGG | 1 cut(s) | 24 |
| BcoDI | GTCTC | 3 cut(s) | 546, 1286, 2416 |
| BfaI | CTAG | 4 cut(s) | 282, 537, 1532, 1640 |
| BfmI | CTRYAG | 3 cut(s) | 894, 1574, 1806 |
| BglII | AGATCT | 3 cut(s) | 1063, 1953, 2044 |
| BmcAI | AGTACT | 1 cut(s) | 1748 |
| Bme1390I | CCNGG | 7 cut(s) | 24, 133, 379, 445, 1430, 1875, 2376 |
| Bme18I | GGWCC | 2 cut(s) | 721, 998 |
| BmeT110I | CYCGRG | 3 cut(s) | 1002, 1880, 2429 |
| BmgBI | CACGTC | 1 cut(s) | 2155 |
| BmgT120I | GGNCC | 5 cut(s) | 306, 721, 845, 998, 1877 |
| BmiI | GGNNCC | 4 cut(s) | 70, 722, 1879, 2401 |
| BmrFI | CCNGG | 7 cut(s) | 24, 133, 379, 445, 1430, 1875, 2376 |
| BmrI | ACTGGG | 2 cut(s) | 1195, 1448 |
| BmsI | GCATC | 8 cut(s) | 251, 361, 609, 831, 1598, 1694, 2131, 2294 |
| BmtI | GCTAGC | 1 cut(s) | 285 |
| BmuI | ACTGGG | 2 cut(s) | 1195, 1448 |
| BpiI | GAAGAC | 3 cut(s) | 962, 1045, 1257 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1499, 1531 |
| BpmI | CTGGAG | 2 cut(s) | 1256, 2015 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1085, 1296 |
| Bpu14I | TTCGAA | 1 cut(s) | 1965 |
| BpuEI | CTTGAG | 1 cut(s) | 1643 |
| BpuMI | CCSGG | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 7 cut(s) | 53, 428, 964, 1001, 1185, 1401, 2008 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 249, 279, 1539, 1569 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 660, 1429, 1717, 2474 |
| Bse1I | ACTGG | 8 cut(s) | 396, 639, 1201, 1321, 1423, 1443, 1566, 1765 |
| Bse3DI | GCAATG | 2 cut(s) | 787, 1179 |
| BseBI | CCWGG | 6 cut(s) | 133, 379, 445, 1430, 1875, 2376 |
| BseDI | CCNNGG | 7 cut(s) | 53, 428, 964, 1001, 1185, 1401, 2008 |
| BseGI | GGATG | 3 cut(s) | 63, 643, 1490 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 660, 1429, 1717, 2474 |
| BseMI | GCAATG | 2 cut(s) | 787, 1179 |
| BseMII | CTCAG | 9 cut(s) | 328, 953, 1076, 1310, 1353, 1743, 1754, 2183, 2454 |
| BseNI | ACTGG | 8 cut(s) | 396, 639, 1201, 1321, 1423, 1443, 1566, 1765 |
| BseRI | GAGGAG | 1 cut(s) | 594 |
| BseSI | GKGCMC | 2 cut(s) | 866, 1410 |
| BseX3I | CGGCCG | 1 cut(s) | 20 |
| BseYI | CCCAGC | 1 cut(s) | 225 |
| BsgI | GTGCAG | 2 cut(s) | 103, 2099 |
| Bsh1285I | CGRYCG | 1 cut(s) | 23 |
| BshFI | GGCC | 5 cut(s) | 22, 308, 846, 1360, 1878 |
| BsiEI | CGRYCG | 1 cut(s) | 23 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1199, 1552, 2096, 2208 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1002, 1880, 2429 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BslFI | GGGAC | 2 cut(s) | 734, 2043 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 660, 1429, 1717, 2474 |
| BsmAI | GTCTC | 3 cut(s) | 546, 1286, 2416 |
| BsmBI | CGTCTC | 1 cut(s) | 546 |
| BsmFI | GGGAC | 2 cut(s) | 734, 2043 |
| BsnI | GGCC | 5 cut(s) | 22, 308, 846, 1360, 1878 |
| BsoBI | CYCGRG | 3 cut(s) | 1002, 1880, 2429 |
| Bsp119I | TTCGAA | 1 cut(s) | 1965 |
| Bsp1286I | GDGCHC | 6 cut(s) | 866, 1199, 1410, 1552, 2096, 2208 |
| Bsp1407I | TGTACA | 1 cut(s) | 574 |
| Bsp143I | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| Bsp19I | CCATGG | 1 cut(s) | 428 |
| BspACI | CCGC | 5 cut(s) | 123, 622, 689, 866, 2342 |
| BspANI | GGCC | 5 cut(s) | 22, 308, 846, 1360, 1878 |
| BspCNI | CTCAG | 9 cut(s) | 327, 952, 1077, 1309, 1354, 1744, 1753, 2182, 2455 |
| BspHI | TCATGA | 1 cut(s) | 2495 |
| BspLI | GGNNCC | 4 cut(s) | 70, 722, 1879, 2401 |
| BspOI | GCTAGC | 1 cut(s) | 285 |
| BspPI | GGATC | 1 cut(s) | 328 |
| BspT104I | TTCGAA | 1 cut(s) | 1965 |
| BsrDI | GCAATG | 2 cut(s) | 787, 1179 |
| BsrGI | TGTACA | 1 cut(s) | 574 |
| BsrI | ACTGG | 8 cut(s) | 396, 639, 1201, 1321, 1423, 1443, 1566, 1765 |
| BssECI | CCNNGG | 7 cut(s) | 53, 428, 964, 1001, 1185, 1401, 2008 |
| BssMI | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| BssT1I | CCWWGG | 6 cut(s) | 53, 428, 964, 1185, 1401, 2008 |
| Bst2UI | CCWGG | 6 cut(s) | 133, 379, 445, 1430, 1875, 2376 |
| Bst4CI | ACNGT | 3 cut(s) | 36, 1034, 1733 |
| Bst6I | CTCTTC | 1 cut(s) | 82 |
| BstAUI | TGTACA | 1 cut(s) | 574 |
| BstBI | TTCGAA | 1 cut(s) | 1965 |
| BstC8I | GCNNGC | 8 cut(s) | 283, 778, 866, 1015, 1571, 1587, 1630, 2352 |
| BstDSI | CCRYGG | 1 cut(s) | 428 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1715, 2472 |
| BstF5I | GGATG | 3 cut(s) | 63, 643, 1490 |
| BstKTI | GATC | 7 cut(s) | 323, 562, 1066, 1099, 1813, 1956, 2047 |
| BstMAI | GTCTC | 3 cut(s) | 546, 1286, 2416 |
| BstMBI | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| BstMCI | CGRYCG | 1 cut(s) | 23 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1703, 1999, 2351 |
| BstNI | CCWGG | 6 cut(s) | 133, 379, 445, 1430, 1875, 2376 |
| BstNSI | RCATGY | 2 cut(s) | 1017, 1589 |
| BstSCI | CCNGG | 7 cut(s) | 22, 131, 377, 443, 1428, 1873, 2374 |
| BstSFI | CTRYAG | 3 cut(s) | 894, 1574, 1806 |
| BstSLI | GKGCMC | 2 cut(s) | 866, 1410 |
| BstV2I | GAAGAC | 3 cut(s) | 962, 1045, 1257 |
| BstX2I | RGATCY | 3 cut(s) | 1063, 1953, 2044 |
| BstYI | RGATCY | 3 cut(s) | 1063, 1953, 2044 |
| BstZI | CGGCCG | 1 cut(s) | 20 |
| BsuRI | GGCC | 5 cut(s) | 22, 308, 846, 1360, 1878 |
| BtgI | CCRYGG | 1 cut(s) | 428 |
| BtgZI | GCGATG | 2 cut(s) | 300, 808 |
| BtrI | CACGTC | 1 cut(s) | 2155 |
| BtsCI | GGATG | 3 cut(s) | 63, 643, 1490 |
| BtsI | GCAGTG | 1 cut(s) | 837 |
| BtsIMutI | CAGTG | 4 cut(s) | 322, 837, 1430, 1738 |
| Cac8I | GCNNGC | 8 cut(s) | 283, 778, 866, 1015, 1571, 1587, 1630, 2352 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2195 |
| CciI | TCATGA | 1 cut(s) | 2495 |
| Cfr13I | GGNCC | 5 cut(s) | 306, 721, 845, 998, 1877 |
| Csp6I | GTAC | 8 cut(s) | 32, 575, 1348, 1747, 1857, 2016, 2067, 2166 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 298, 333 |
| CviQI | GTAC | 8 cut(s) | 32, 575, 1348, 1747, 1857, 2016, 2067, 2166 |
| DpnI | GATC | 7 cut(s) | 322, 561, 1065, 1098, 1812, 1955, 2046 |
| DpnII | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| EaeI | YGGCCR | 1 cut(s) | 20 |
| EagI | CGGCCG | 1 cut(s) | 20 |
| Eam1104I | CTCTTC | 1 cut(s) | 82 |
| EarI | CTCTTC | 1 cut(s) | 82 |
| Ecl136II | GAGCTC | 3 cut(s) | 1550, 2094, 2206 |
| EclXI | CGGCCG | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 6 cut(s) | 53, 428, 964, 1185, 1401, 2008 |
| Eco24I | GRGCYC | 3 cut(s) | 1552, 2096, 2208 |
| Eco32I | GATATC | 1 cut(s) | 411 |
| Eco47I | GGWCC | 2 cut(s) | 721, 998 |
| Eco52I | CGGCCG | 1 cut(s) | 20 |
| Eco53kI | GAGCTC | 3 cut(s) | 1550, 2094, 2206 |
| Eco57I | CTGAAG | 5 cut(s) | 161, 270, 669, 2061, 2490 |
| Eco88I | CYCGRG | 3 cut(s) | 1002, 1880, 2429 |
| EcoICRI | GAGCTC | 3 cut(s) | 1550, 2094, 2206 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1715, 2472 |
| EcoRI | GAATTC | 1 cut(s) | 1792 |
| EcoRII | CCWGG | 6 cut(s) | 131, 377, 443, 1428, 1873, 2374 |
| EcoRV | GATATC | 1 cut(s) | 411 |
| EcoT14I | CCWWGG | 6 cut(s) | 53, 428, 964, 1185, 1401, 2008 |
| EcoT22I | ATGCAT | 2 cut(s) | 469, 1591 |
| EcoT38I | GRGCYC | 3 cut(s) | 1552, 2096, 2208 |
| ErhI | CCWWGG | 6 cut(s) | 53, 428, 964, 1185, 1401, 2008 |
| Esp3I | CGTCTC | 1 cut(s) | 546 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 155, 187, 1585, 1617 |
| FaqI | GGGAC | 2 cut(s) | 734, 2043 |
| FauI | CCCGC | 2 cut(s) | 615, 873 |
| FokI | GGATG | 3 cut(s) | 70, 630, 1477 |
| FriOI | GRGCYC | 3 cut(s) | 1552, 2096, 2208 |
| FspBI | CTAG | 4 cut(s) | 282, 537, 1532, 1640 |
| GsaI | CCCAGC | 1 cut(s) | 229 |
| GsuI | CTGGAG | 2 cut(s) | 1256, 2015 |
| HaeIII | GGCC | 5 cut(s) | 22, 308, 846, 1360, 1878 |
| HapII | CCGG | 1 cut(s) | 23 |
| HindIII | AAGCTT | 1 cut(s) | 1567 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 3 cut(s) | 359, 703, 1739 |
| Hpy166II | GTNNAC | 2 cut(s) | 212, 350 |
| Hpy8I | GTNNAC | 2 cut(s) | 212, 350 |
| HpyAV | CCTTC | 7 cut(s) | 693, 880, 1380, 2219, 2397, 2428, 2468 |
| HpyCH4III | ACNGT | 3 cut(s) | 36, 1034, 1733 |
| HpyCH4IV | ACGT | 4 cut(s) | 479, 1127, 2109, 2154 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1703, 1999, 2351 |
| HpySE526I | ACGT | 4 cut(s) | 479, 1127, 2109, 2154 |
| Kzo9I | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| LmnI | GCTCC | 5 cut(s) | 607, 1547, 2203, 2211, 2399 |
| LweI | GCATC | 8 cut(s) | 251, 361, 609, 831, 1598, 1694, 2131, 2294 |
| MaeI | CTAG | 4 cut(s) | 282, 537, 1532, 1640 |
| MaeII | ACGT | 4 cut(s) | 479, 1127, 2109, 2154 |
| MaeIII | GTNAC | 9 cut(s) | 148, 691, 795, 832, 1028, 1459, 1727, 1733, 2323 |
| MalI | GATC | 7 cut(s) | 322, 561, 1065, 1098, 1812, 1955, 2046 |
| MboI | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| MfeI | CAATTG | 2 cut(s) | 98, 140 |
| MflI | RGATCY | 3 cut(s) | 1063, 1953, 2044 |
| MhlI | GDGCHC | 6 cut(s) | 866, 1199, 1410, 1552, 2096, 2208 |
| MlyI | GAGTC | 5 cut(s) | 130, 1517, 1730, 1892, 2033 |
| MmeI | TCCRAC | 2 cut(s) | 46, 1965 |
| Mph1103I | ATGCAT | 2 cut(s) | 469, 1591 |
| MroXI | GAANNNNTTC | 2 cut(s) | 354, 984 |
| MslI | CAYNNNNRTG | 1 cut(s) | 809 |
| MspA1I | CMGCKG | 2 cut(s) | 773, 2192 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 7 cut(s) | 24, 133, 379, 445, 1430, 1875, 2376 |
| MunI | CAATTG | 2 cut(s) | 98, 140 |
| MvaI | CCWGG | 6 cut(s) | 133, 379, 445, 1430, 1875, 2376 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1703, 1999, 2351 |
| NciI | CCSGG | 1 cut(s) | 24 |
| NcoI | CCATGG | 1 cut(s) | 428 |
| NdeII | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| NheI | GCTAGC | 1 cut(s) | 281 |
| NlaIV | GGNNCC | 4 cut(s) | 70, 722, 1879, 2401 |
| NmuCI | GTSAC | 8 cut(s) | 148, 691, 795, 832, 1028, 1727, 1733, 2323 |
| NsiI | ATGCAT | 2 cut(s) | 469, 1591 |
| NspI | RCATGY | 2 cut(s) | 1017, 1589 |
| NspV | TTCGAA | 1 cut(s) | 1965 |
| PaeI | GCATGC | 2 cut(s) | 1017, 1589 |
| PaeR7I | CTCGAG | 1 cut(s) | 2429 |
| PagI | TCATGA | 1 cut(s) | 2495 |
| PdmI | GAANNNNTTC | 2 cut(s) | 354, 984 |
| PfeI | GAWTC | 8 cut(s) | 883, 1173, 1240, 1366, 1836, 1937, 2186, 2492 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 660 |
| PfoI | TCCNGGA | 1 cut(s) | 131 |
| PleI | GAGTC | 5 cut(s) | 130, 1516, 1730, 1891, 2032 |
| PpsI | GAGTC | 5 cut(s) | 130, 1516, 1730, 1891, 2032 |
| PshBI | ATTAAT | 1 cut(s) | 1121 |
| Psp124BI | GAGCTC | 3 cut(s) | 1552, 2096, 2208 |
| Psp6I | CCWGG | 6 cut(s) | 131, 377, 443, 1428, 1873, 2374 |
| PspFI | CCCAGC | 1 cut(s) | 225 |
| PspGI | CCWGG | 6 cut(s) | 131, 377, 443, 1428, 1873, 2374 |
| PspN4I | GGNNCC | 4 cut(s) | 70, 722, 1879, 2401 |
| PspPI | GGNCC | 5 cut(s) | 306, 721, 845, 998, 1877 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2195 |
| PsuI | RGATCY | 3 cut(s) | 1063, 1953, 2044 |
| PvuII | CAGCTG | 2 cut(s) | 773, 2192 |
| RsaI | GTAC | 8 cut(s) | 33, 576, 1349, 1748, 1858, 2017, 2068, 2167 |
| RsaNI | GTAC | 8 cut(s) | 32, 575, 1348, 1747, 1857, 2016, 2067, 2166 |
| RseI | CAYNNNNRTG | 1 cut(s) | 809 |
| SacI | GAGCTC | 3 cut(s) | 1552, 2096, 2208 |
| Sau3AI | GATC | 7 cut(s) | 320, 559, 1063, 1096, 1810, 1953, 2044 |
| Sau96I | GGNCC | 5 cut(s) | 306, 721, 845, 998, 1877 |
| ScaI | AGTACT | 1 cut(s) | 1748 |
| SchI | GAGTC | 5 cut(s) | 130, 1517, 1730, 1892, 2033 |
| ScrFI | CCNGG | 7 cut(s) | 24, 133, 379, 445, 1430, 1875, 2376 |
| SduI | GDGCHC | 6 cut(s) | 866, 1199, 1410, 1552, 2096, 2208 |
| SfaNI | GCATC | 8 cut(s) | 251, 361, 609, 831, 1598, 1694, 2131, 2294 |
| SfcI | CTRYAG | 3 cut(s) | 894, 1574, 1806 |
| Sfr274I | CTCGAG | 1 cut(s) | 2429 |
| SfuI | TTCGAA | 1 cut(s) | 1965 |
| SinI | GGWCC | 2 cut(s) | 721, 998 |
| SlaI | CTCGAG | 1 cut(s) | 2429 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 809 |
| SmlI | CTYRAG | 2 cut(s) | 1658, 2429 |
| SmoI | CTYRAG | 2 cut(s) | 1658, 2429 |
| SphI | GCATGC | 2 cut(s) | 1017, 1589 |
| SsiI | CCGC | 5 cut(s) | 123, 622, 689, 866, 2342 |
| SspI | AATATT | 1 cut(s) | 1901 |
| SspMI | CTAG | 4 cut(s) | 282, 537, 1532, 1640 |
| SstI | GAGCTC | 3 cut(s) | 1552, 2096, 2208 |
| StyD4I | CCNGG | 7 cut(s) | 22, 131, 377, 443, 1428, 1873, 2374 |
| StyI | CCWWGG | 6 cut(s) | 53, 428, 964, 1185, 1401, 2008 |
| TaaI | ACNGT | 3 cut(s) | 36, 1034, 1733 |
| TaiI | ACGT | 4 cut(s) | 482, 1130, 2112, 2157 |
| TaqI | TCGA | 4 cut(s) | 419, 1965, 2390, 2430 |
| TaqII | GACCGA | 1 cut(s) | 2291 |
| TatI | WGTACW | 4 cut(s) | 574, 1347, 1746, 2015 |
| TauI | GCSGC | 1 cut(s) | 2345 |
| TfiI | GAWTC | 8 cut(s) | 883, 1173, 1240, 1366, 1836, 1937, 2186, 2492 |
| TscAI | CASTG | 4 cut(s) | 322, 837, 1430, 1738 |
| TseFI | GTSAC | 8 cut(s) | 148, 691, 795, 832, 1028, 1727, 1733, 2323 |
| Tsp45I | GTSAC | 8 cut(s) | 148, 691, 795, 832, 1028, 1727, 1733, 2323 |
| TspGWI | ACGGA | 5 cut(s) | 52, 229, 487, 2165, 2412 |
| TspRI | CASTG | 4 cut(s) | 322, 837, 1430, 1738 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 660 |
| VpaK11BI | GGWCC | 2 cut(s) | 721, 998 |
| VspI | ATTAAT | 1 cut(s) | 1121 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1715, 2472 |
| XapI | RAATTY | 7 cut(s) | 127, 914, 980, 1391, 1673, 1792, 1801 |
| XbaI | TCTAGA | 2 cut(s) | 536, 1531 |
| XceI | RCATGY | 2 cut(s) | 1017, 1589 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1721 |
| XhoI | CTCGAG | 1 cut(s) | 2429 |
| XmnI | GAANNNNTTC | 2 cut(s) | 354, 984 |
| XspI | CTAG | 4 cut(s) | 282, 537, 1532, 1640 |
| ZrmI | AGTACT | 1 cut(s) | 1748 |
| Zsp2I | ATGCAT | 2 cut(s) | 469, 1591 |