Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003899

Physical Location & Seq

Genomic Coordinates Forward (+)

11904704 .. 11911741

Gene Structure 7038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0145100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGGGAGAAGAGGATCGATTGACAAATGGGGGAGTGGAAATCGAGAGCTTCCCGAGAACTGAATTGAAGCGAGACCATCAGTGTCTCGTGGATGATACTGAGCCGGACTCTTTTCCAAACAAGAAGCAAGCCAAAGAGGTTTCGAATGAAGATATACGCTCCGAAGTTTCGAATCCGGTTGTGTCTCCCAAGGAGAATGGCTCCAGCTTTCAGGACATTACTAGCCAACCGGTGGAGTTGGCAAATAGTAATCAGGTAGAGTGTGGAGAAGTTACTTCTTCGAGTTTGGAGAATTCCAGCTCGGAGGAGGAGAGTTTGAGTGTTGGAGAGCCTGCTGAGAATGACACTGGCCAGATTGAGACGGATACAACTCGTGTTGTAGTTGAAATTCCTAAGCCGTCTAGTTCATCTGGGATTCGCAAAATCACGTTTAAGTTCAGCAAAAGAAAGGAGGATTATGAGAACCAGGTGTTTACTTCATTGAGTCAGACCGTACATAATGGGTTCGGAAGTGATTCATCCTATGGAGGTGAGCCTGGAAGTGACTTTCGAGAAATGGCTGGTACGAGTTGGGGGATTCGAGAAAGGTCATATGCTCATGTCAGGGAGTCGGTCTCTAACAAGGTTCCAGAGTGCTACCCTAGTAATGTTAAAAAGCTATTAGCTACTGGTATTCTTGATGGAGCTCGAGTGAAGTATGTTTCCACCGGGTCACAGGTGGAGCTAGACGGAATTATAAGTGGTGGTGGTTATTTGTGTGGCTGTTCATCCTGCAATTACACCAATGTGCTCAGTGCGTTTGAGTTTGAGCAGCATGCTGGTGTCAAAACTCGCCATCCCAATAATCATATATTCCTGGAGAATGGAAGGCCGGTTTATAATATCATCCAAGAATTGAAGACTGCTCCACTCAACAAGCTGGATGAAGTGATAGAGACAGTTGCTGGTCCTGCTGTTAATGAAGGGTTCTTCAGGATCTGGAAAGAATCTCTTTACCGCGTTGATGGGGCTGAAGTGGATAAAAGACATTCCGTGAAGCTTCCTAAATTGCCTCGGGTTCCCAAGAAGCCCAAGCTTCCTAAATTGCCTCATTCATTTCCCAGACCAAGCTTCCATACTCCTTACTCTGTTATGCACCAGAAGAAAACTACTGGACGTGGCAATAAGAGAAGGGATAATGATCTGCACCGGCTACTATTCATGCCAAATGGGCTTCCAGATGGGGCTAAATTGGCATACTATATGAAAGGACAGAGAATACTTGGAGGCTATAAGCACGGGAATGGTATAGTATGTAATTGTTGCAACAAAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCCGGAATGTCTGCAAGGCGTCAACCCTATCGTCACATCTATATATCCAATGGATTGACGCTTCATGATATAGCCACGTCATTGGCCAATGGGCAGAACCTTACGACTGGTGCCAGTGATGGAAGTGATGATATGTGTGCAGTATGCGGACATGATACCGGGAAGATGATTCTTTGTGATGGATGCCCTCGTGCTTTTCATGAAGCTTGTTTGGATTCAGAATGGATTCCTGAAAGCGATTGGCATTGTCCGAATTGTAGAGATAATTTTGAAAATGTTAGTAAAACTGCTGCTGGAGGATCTTCAAGTATTGCAAGACCAATTGTAATACGTTTGACACGGGAATTCAAAGCACCTGAAATTGAAATCGGTGGTTGTGTCCTCTGCAGGAGAAACGACTTCAGTGCAGCTTTATTCGATGAACGAACGGTTATAATCTGTGACCAATGTGAGAAGGAGTATCATGTTGGTTGCTTACGGGACAATGGATTATGCGACTTAAAGGAACTCCCCAAGGATAAGTGGTTTTGCTGTGATGACTGTAATAGGATTTTTGAGGCTTTACAGAATTTAGTATTCAAGGAAGCAGAGCGGGTTCCAGCTCCATTGTCAGATCCAATAATCAGGAAGCATGCAGATAGAGGTATATTTATTGATGGAGTGGCAGATGATGTTCAATGGAGAATTTTCAGTGGAAAAAGTCGCTGTCCAGAACATCTACCATTTTTATCAAGTGCTGCTGCGATTTTTCGAGAGTGCTTTGACCCCATTGTTGCAAAATCTGGTCGTGATTTGATTCCTGTTATGGTATATGGGAGAAATATTTCAGGCCAAGAGTTTGGAGGAATGTATTGTGTTGTCTTAACAGTGAGGTCTGTTGTTGTATCTGCTGGTCTTCTTAGGATTTTTGGTCGGGAAGTTGCTGAGCTTCCGATTGTGGCTACAAGTAGAGAACATCAAGGAAAAGGTTATTTCCAAGCATTATTTTCCTGTATAGAAATGTTACTCCTTTCCCTGAAAGTGGAAAAACTGGTTCTCCCTGCTGCTGAGGAAGCGGAGTCAATCTGGACAAAGAAATTAGGCTTCCAAAAGATGAGGGACGAGCAACTATCAAAATATATGAAGGAGGTTCAGCTGACGGTTTTCAGGGGGACATCGATGTTAGAAAAGATGGTGCGGTCGATGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LETM1

Protein Analysis

843

Amino Acids

93.77

Weight (kDa)

6.18

Isoelectric Point (pI)

45.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TDBD	PF16135	244 - 298	2.2e-13	Tify domain binding domain
TDBD	PF16135	427 - 471	5.6e-14	Tify domain binding domain
PHD	PF00628	493 - 533	4.5e-07	PHD-finger
IDM1_C	PF23209	701 - 837	1.1e-51	Increased DNA methylation 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003899)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11560 AT3G11560 AT3G11560 AT3G11560 AT3G11560 AT5G06220 AT5G06220 AT5G06220
fragaria_vesca	FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540
malus_domestica	MD12G1031800.v1.1 MD14G1032100.v1.1
prunus_persica	Prupe.7G100800_v2.0.a1 Prupe.7G100800_v2.0.a1
pyrus_communis	pycom14g02890
rosa_chinensis	RchiOBHm_Chr3g0474881
rosa_laevigata	RLG00000023884
rosa_multiflora	Rmu_co8463519.1_g000001 Rmu_sc0008866.1_g000001 Rmu_sc0022080.1_g000001 Rmu_sc0022081.1_g000001
rosa_roxburghii	Rroxscaffold_6G00406770
rosa_rugosa	Rorug03G0145100
rosa_samantha	Rh3AG194700 Rh3BG224500 Rh3CG219600 Rh3DG220200
rosa_wichuraiana	Rw3G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	737, 879, 1775
AccB1I	GGYRCC	1 cut(s)	1451
AccB7I	CCANNNNNTGG	1 cut(s)	232
AccBSI	CCGCTC	1 cut(s)	1933
AccII	CGCG	1 cut(s)	999
AciI	CCGC	5 cut(s)	997, 1488, 1933, 2396, 2518
AclWI	GGATC	4 cut(s)	21, 983, 1648, 1949
AcoI	YGGCCR	2 cut(s)	349, 1425
AcsI	RAATTY	5 cut(s)	292, 387, 1685, 1909, 2025
AcuI	CTGAAG	3 cut(s)	955, 1032, 1726
AcyI	GRCGYC	1 cut(s)	1360
AfaI	GTAC	2 cut(s)	495, 565
AfiI	CCNNNNNNNGG	2 cut(s)	232, 2362
AgeI	ACCGGT	1 cut(s)	229
AjiI	CACGTC	2 cut(s)	1157, 1419
AjnI	CCWGG	3 cut(s)	465, 535, 855
AleI	CACNNNNGTG	1 cut(s)	785
Alw21I	GWGCWC	2 cut(s)	688, 792
Alw26I	GTCTC	6 cut(s)	66, 89, 189, 353, 619, 929
AlwI	GGATC	4 cut(s)	21, 983, 1648, 1949
AlwNI	CAGNNNCTG	2 cut(s)	944, 978
Ama87I	CYCGRG	3 cut(s)	52, 687, 1053
AoxI	GGCC	4 cut(s)	349, 869, 1425, 2170
ApeKI	GCWGC	6 cut(s)	811, 1631, 1748, 2078, 2081, 2384
ApoI	RAATTY	5 cut(s)	292, 387, 1685, 1909, 2025
AsiGI	ACCGGT	1 cut(s)	229
Asp700I	GAANNNNTTC	3 cut(s)	514, 1566, 2164
AspS9I	GGNCC	1 cut(s)	947
AsuC2I	CCSGG	2 cut(s)	709, 1501
AsuHPI	GGTGA	1 cut(s)	542
AsuII	TTCGAA	2 cut(s)	143, 170
AvaI	CYCGRG	3 cut(s)	52, 687, 1053
AvaII	GGWCC	1 cut(s)	947
BalI	TGGCCA	2 cut(s)	351, 1427
BanI	GGYRCC	1 cut(s)	1451
BanII	GRGCYC	1 cut(s)	688
BauI	CACGAG	3 cut(s)	86, 372, 1530
BbsI	GAAGAC	2 cut(s)	905, 2228
Bbv12I	GWGCWC	2 cut(s)	688, 792
BbvCI	CCTCAGC	1 cut(s)	2388
BbvI	GCAGC	6 cut(s)	823, 1618, 1760, 2065, 2068, 2371
BceAI	ACGGC	1 cut(s)	382
BcgI	CGANNNNNNTGC	2 cut(s)	1727, 1761
BciT130I	CCWGG	3 cut(s)	467, 537, 857
BciVI	GTATCC	1 cut(s)	358
BcnI	CCSGG	2 cut(s)	709, 1501
BcoDI	GTCTC	6 cut(s)	66, 89, 189, 353, 619, 929
BfaI	CTAG	4 cut(s)	222, 402, 642, 725
BfmI	CTRYAG	1 cut(s)	1726
BfuI	GTATCC	1 cut(s)	358
BglI	GCCNNNNNGGC	1 cut(s)	1210
BisI	GCNGC	6 cut(s)	812, 1632, 1749, 2079, 2082, 2385
BlpI	GCTNAGC	1 cut(s)	2265
BlsI	GCNGC	6 cut(s)	813, 1633, 1750, 2080, 2083, 2386
Bme1390I	CCNGG	5 cut(s)	467, 537, 709, 857, 1501
Bme18I	GGWCC	1 cut(s)	947
BmeT110I	CYCGRG	3 cut(s)	52, 687, 1053
BmgBI	CACGTC	2 cut(s)	1157, 1419
BmgT120I	GGNCC	1 cut(s)	947
BmiI	GGNNCC	5 cut(s)	202, 627, 1059, 1453, 1938
BmrFI	CCNGG	5 cut(s)	467, 537, 709, 857, 1501
BmsI	GCATC	1 cut(s)	1514
BpiI	GAAGAC	2 cut(s)	905, 2228
BplI	GAGNNNNNCTC	6 cut(s)	92, 124, 185, 217, 599, 631
BpmI	CTGGAG	3 cut(s)	187, 878, 1656
Bpu10I	CCTNAGC	2 cut(s)	393, 2388
Bpu1102I	GCTNAGC	1 cut(s)	2265
Bpu14I	TTCGAA	2 cut(s)	143, 170
BpuMI	CCSGG	2 cut(s)	709, 1501
Bsa29I	ATCGAT	2 cut(s)	16, 2498
BsaBI	GATNNNNATC	1 cut(s)	1179
BsaHI	GRCGYC	1 cut(s)	1360
BsaI	GGTCTC	2 cut(s)	66, 619
BsaJI	CCNNGG	3 cut(s)	189, 1052, 1854
BsaWI	WCCGGW	2 cut(s)	175, 229
BsaXI	ACNNNNNCTCC	4 cut(s)	675, 705, 2361, 2391
Bsc4I	CCNNNNNNNGG	2 cut(s)	232, 2362
Bse118I	RCCGGY	3 cut(s)	229, 871, 1188
Bse1I	ACTGG	6 cut(s)	352, 673, 1156, 1453, 1455, 2376
Bse8I	GATNNNNATC	1 cut(s)	1179
BseBI	CCWGG	3 cut(s)	467, 537, 857
BseCI	ATCGAT	2 cut(s)	16, 2498
BseDI	CCNNGG	3 cut(s)	189, 1052, 1854
BseGI	GGATG	7 cut(s)	97, 518, 767, 835, 885, 928, 1529
BseJI	GATNNNNATC	1 cut(s)	1179
BseLI	CCNNNNNNNGG	2 cut(s)	232, 2362
BseMII	CTCAG	5 cut(s)	90, 327, 805, 2256, 2379
BseNI	ACTGG	6 cut(s)	352, 673, 1156, 1453, 1455, 2376
BseRI	GAGGAG	2 cut(s)	320, 323
BseXI	GCAGC	6 cut(s)	823, 1618, 1760, 2065, 2068, 2371
BsgI	GTGCAG	3 cut(s)	1169, 1500, 1767
Bsh1236I	CGCG	1 cut(s)	999
Bsh1285I	CGRYCG	1 cut(s)	2522
BshFI	GGCC	4 cut(s)	351, 871, 1427, 2172
BshNI	GGYRCC	1 cut(s)	1451
BshTI	ACCGGT	1 cut(s)	229
BshVI	ATCGAT	2 cut(s)	16, 2498
BsiEI	CGRYCG	1 cut(s)	2522
BsiHKAI	GWGCWC	2 cut(s)	688, 792
BsiHKCI	CYCGRG	3 cut(s)	52, 687, 1053
BsiSI	CCGG	8 cut(s)	104, 176, 230, 708, 872, 1189, 1344, 1500
BslFI	GGGAC	3 cut(s)	1835, 2453, 2506
BslI	CCNNNNNNNGG	2 cut(s)	232, 2362
BsmAI	GTCTC	6 cut(s)	66, 89, 189, 353, 619, 929
BsmBI	CGTCTC	1 cut(s)	353
BsmFI	GGGAC	3 cut(s)	1835, 2453, 2506
BsnI	GGCC	4 cut(s)	351, 871, 1427, 2172
Bso31I	GGTCTC	2 cut(s)	66, 619
BsoBI	CYCGRG	3 cut(s)	52, 687, 1053
Bsp119I	TTCGAA	2 cut(s)	143, 170
Bsp1286I	GDGCHC	2 cut(s)	688, 792
Bsp143I	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
Bsp1720I	GCTNAGC	1 cut(s)	2265
BspACI	CCGC	5 cut(s)	997, 1488, 1933, 2396, 2518
BspANI	GGCC	4 cut(s)	351, 871, 1427, 2172
BspCNI	CTCAG	5 cut(s)	91, 328, 804, 2257, 2380
BspDI	ATCGAT	2 cut(s)	16, 2498
BspFNI	CGCG	1 cut(s)	999
BspHI	TCATGA	2 cut(s)	1405, 1540
BspLI	GGNNCC	5 cut(s)	202, 627, 1059, 1453, 1938
BspMAI	CTGCAG	1 cut(s)	1730
BspPI	GGATC	4 cut(s)	21, 983, 1648, 1949
BspT104I	TTCGAA	2 cut(s)	143, 170
BspT107I	GGYRCC	1 cut(s)	1451
BspTNI	GGTCTC	2 cut(s)	66, 619
BsrBI	CCGCTC	1 cut(s)	1933
BsrFI	RCCGGY	3 cut(s)	229, 871, 1188
BsrI	ACTGG	6 cut(s)	352, 673, 1156, 1453, 1455, 2376
BssAI	RCCGGY	3 cut(s)	229, 871, 1188
BssECI	CCNNGG	3 cut(s)	189, 1052, 1854
BssMI	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
BssNI	GRCGYC	1 cut(s)	1360
BssSI	CACGAG	3 cut(s)	86, 372, 1530
BssT1I	CCWWGG	2 cut(s)	189, 1854
Bst2BI	CACGAG	3 cut(s)	86, 372, 1530
Bst2UI	CCWGG	3 cut(s)	467, 537, 857
Bst4CI	ACNGT	7 cut(s)	493, 940, 1329, 1771, 1883, 2209, 2482
Bst6I	CTCTTC	1 cut(s)	3
BstACI	GRCGYC	1 cut(s)	1360
BstBI	TTCGAA	2 cut(s)	143, 170
BstC8I	GCNNGC	4 cut(s)	129, 333, 816, 1974
BstDEI	CTNAG	7 cut(s)	99, 336, 393, 791, 2240, 2265, 2388
BstF5I	GGATG	7 cut(s)	97, 518, 767, 835, 885, 928, 1529
BstFNI	CGCG	1 cut(s)	999
BstKTI	GATC	5 cut(s)	16, 978, 1183, 1643, 1957
BstMAI	GTCTC	6 cut(s)	66, 89, 189, 353, 619, 929
BstMBI	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
BstMCI	CGRYCG	1 cut(s)	2522
BstMWI	GCNNNNNNNGC	4 cut(s)	950, 1210, 1232, 2393
BstNI	CCWGG	3 cut(s)	467, 537, 857
BstNSI	RCATGY	2 cut(s)	818, 1976
BstSCI	CCNGG	5 cut(s)	465, 535, 707, 855, 1499
BstSFI	CTRYAG	1 cut(s)	1726
BstUI	CGCG	1 cut(s)	999
BstV1I	GCAGC	6 cut(s)	823, 1618, 1760, 2065, 2068, 2371
BstV2I	GAAGAC	2 cut(s)	905, 2228
BstX2I	RGATCY	3 cut(s)	975, 1640, 1954
BstXI	CCANNNNNNTGG	2 cut(s)	1423, 2180
BstYI	RGATCY	3 cut(s)	975, 1640, 1954
Bsu15I	ATCGAT	2 cut(s)	16, 2498
BsuI	GTATCC	1 cut(s)	358
BsuRI	GGCC	4 cut(s)	351, 871, 1427, 2172
BsuTUI	ATCGAT	2 cut(s)	16, 2498
BtrI	CACGTC	2 cut(s)	1157, 1419
BtsCI	GGATG	7 cut(s)	97, 518, 767, 835, 885, 928, 1529
BtsIMutI	CAGTG	7 cut(s)	86, 345, 799, 1462, 1750, 2038, 2214
Cac8I	GCNNGC	4 cut(s)	129, 333, 816, 1974
CaiI	CAGNNNCTG	2 cut(s)	944, 978
CciI	TCATGA	2 cut(s)	1405, 1540
Cfr10I	RCCGGY	3 cut(s)	229, 871, 1188
Cfr13I	GGNCC	1 cut(s)	947
ClaI	ATCGAT	2 cut(s)	16, 2498
CseI	GACGC	2 cut(s)	1349, 1408
CsiI	ACCWGGT	1 cut(s)	465
Csp6I	GTAC	2 cut(s)	494, 564
CspAI	ACCGGT	1 cut(s)	229
CviAII	CATG	9 cut(s)	599, 815, 1201, 1340, 1406, 1493, 1541, 1805, 1973
CviQI	GTAC	2 cut(s)	494, 564
DdeI	CTNAG	7 cut(s)	99, 336, 393, 791, 2240, 2265, 2388
DpnI	GATC	5 cut(s)	15, 977, 1182, 1642, 1956
DpnII	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
EaeI	YGGCCR	2 cut(s)	349, 1425
Eam1104I	CTCTTC	1 cut(s)	3
EarI	CTCTTC	1 cut(s)	3
Ecl136II	GAGCTC	1 cut(s)	686
Eco130I	CCWWGG	2 cut(s)	189, 1854
Eco24I	GRGCYC	1 cut(s)	688
Eco31I	GGTCTC	2 cut(s)	66, 619
Eco47I	GGWCC	1 cut(s)	947
Eco53kI	GAGCTC	1 cut(s)	686
Eco57I	CTGAAG	3 cut(s)	955, 1032, 1726
Eco88I	CYCGRG	3 cut(s)	52, 687, 1053
EcoICRI	GAGCTC	1 cut(s)	686
EcoRI	GAATTC	2 cut(s)	292, 1685
EcoRII	CCWGG	3 cut(s)	465, 535, 855
EcoT14I	CCWWGG	2 cut(s)	189, 1854
EcoT38I	GRGCYC	1 cut(s)	688
ErhI	CCWWGG	2 cut(s)	189, 1854
Esp3I	CGTCTC	1 cut(s)	353
FaeI	CATG	9 cut(s)	602, 818, 1204, 1343, 1409, 1496, 1544, 1808, 1976
FalI	AAGNNNNNCTT	2 cut(s)	975, 1007
FaqI	GGGAC	3 cut(s)	1835, 2453, 2506
FatI	CATG	9 cut(s)	598, 814, 1200, 1339, 1405, 1492, 1540, 1804, 1972
FauI	CCCGC	1 cut(s)	1926
FauNDI	CATATG	1 cut(s)	592
Fnu4HI	GCNGC	6 cut(s)	812, 1632, 1749, 2079, 2082, 2385
FokI	GGATG	7 cut(s)	104, 505, 754, 822, 872, 935, 1536
FriOI	GRGCYC	1 cut(s)	688
Fsp4HI	GCNGC	6 cut(s)	812, 1632, 1749, 2079, 2082, 2385
FspBI	CTAG	4 cut(s)	222, 402, 642, 725
GluI	GCNGC	6 cut(s)	812, 1632, 1749, 2079, 2082, 2385
GsuI	CTGGAG	3 cut(s)	187, 878, 1656
HaeIII	GGCC	4 cut(s)	351, 871, 1427, 2172
HapII	CCGG	8 cut(s)	104, 176, 230, 708, 872, 1189, 1344, 1500
HgaI	GACGC	2 cut(s)	1349, 1408
Hin1I	GRCGYC	1 cut(s)	1360
Hin1II	CATG	9 cut(s)	602, 818, 1204, 1343, 1409, 1496, 1544, 1808, 1976
HincII	GTYRAC	1 cut(s)	1364
HindII	GTYRAC	1 cut(s)	1364
HindIII	AAGCTT	4 cut(s)	1037, 1073, 1108, 1545
HpaII	CCGG	8 cut(s)	104, 176, 230, 708, 872, 1189, 1344, 1500
HphI	GGTGA	1 cut(s)	542
Hpy166II	GTNNAC	2 cut(s)	474, 1364
Hpy188I	TCNGA	8 cut(s)	163, 304, 489, 509, 1561, 1593, 1954, 2274
Hpy8I	GTNNAC	2 cut(s)	474, 1364
HpyAV	CCTTC	6 cut(s)	861, 956, 1164, 1332, 1789, 2458
HpyCH4III	ACNGT	7 cut(s)	493, 940, 1329, 1771, 1883, 2209, 2482
HpyCH4IV	ACGT	4 cut(s)	428, 1156, 1418, 1672
HpyF10VI	GCNNNNNNNGC	4 cut(s)	950, 1210, 1232, 2393
HpyF3I	CTNAG	7 cut(s)	99, 336, 393, 791, 2240, 2265, 2388
HpySE526I	ACGT	4 cut(s)	428, 1156, 1418, 1672
Hsp92I	GRCGYC	1 cut(s)	1360
Hsp92II	CATG	9 cut(s)	602, 818, 1204, 1343, 1409, 1496, 1544, 1808, 1976
Kzo9I	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
LmnI	GCTCC	6 cut(s)	164, 206, 683, 721, 910, 1948
Lsp1109I	GCAGC	6 cut(s)	823, 1618, 1760, 2065, 2068, 2371
LweI	GCATC	1 cut(s)	1514
MabI	ACCWGGT	1 cut(s)	465
MaeI	CTAG	4 cut(s)	222, 402, 642, 725
MaeII	ACGT	4 cut(s)	428, 1156, 1418, 1672
MaeIII	GTNAC	6 cut(s)	271, 542, 711, 1373, 1781, 2343
MalI	GATC	5 cut(s)	15, 977, 1182, 1642, 1956
MbiI	CCGCTC	1 cut(s)	1933
MboI	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
MboII	GAAGA	9 cut(s)	20, 161, 270, 910, 961, 1153, 1516, 1635, 2228
MfeI	CAATTG	1 cut(s)	1662
MflI	RGATCY	3 cut(s)	975, 1640, 1954
MhlI	GDGCHC	2 cut(s)	688, 792
MlsI	TGGCCA	2 cut(s)	351, 1427
MluNI	TGGCCA	2 cut(s)	351, 1427
MlyI	GAGTC	4 cut(s)	101, 493, 617, 2408
MmeI	TCCRAC	1 cut(s)	304
Mox20I	TGGCCA	2 cut(s)	351, 1427
MroXI	GAANNNNTTC	3 cut(s)	514, 1566, 2164
MscI	TGGCCA	2 cut(s)	351, 1427
MseI	TTAA	5 cut(s)	432, 651, 957, 1841, 2204
MslI	CAYNNNNRTG	3 cut(s)	785, 819, 1281
Msp20I	TGGCCA	2 cut(s)	351, 1427
MspA1I	CMGCKG	1 cut(s)	2476
MspI	CCGG	8 cut(s)	104, 176, 230, 708, 872, 1189, 1344, 1500
MspR9I	CCNGG	5 cut(s)	467, 537, 709, 857, 1501
MunI	CAATTG	1 cut(s)	1662
MvaI	CCWGG	3 cut(s)	467, 537, 857
MvnI	CGCG	1 cut(s)	999
MwoI	GCNNNNNNNGC	4 cut(s)	950, 1210, 1232, 2393
NciI	CCSGG	2 cut(s)	709, 1501
NdeI	CATATG	1 cut(s)	592
NdeII	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
NlaIII	CATG	9 cut(s)	602, 818, 1204, 1343, 1409, 1496, 1544, 1808, 1976
NlaIV	GGNNCC	5 cut(s)	202, 627, 1059, 1453, 1938
NmuCI	GTSAC	4 cut(s)	542, 711, 1373, 1781
NspI	RCATGY	2 cut(s)	818, 1976
NspV	TTCGAA	2 cut(s)	143, 170
OliI	CACNNNNGTG	1 cut(s)	785
PaeI	GCATGC	2 cut(s)	818, 1976
PaeR7I	CTCGAG	1 cut(s)	687
PagI	TCATGA	2 cut(s)	1405, 1540
PdmI	GAANNNNTTC	3 cut(s)	514, 1566, 2164
PfeI	GAWTC	9 cut(s)	172, 415, 515, 577, 986, 1510, 1556, 1567, 2137
PflMI	CCANNNNNTGG	1 cut(s)	232
PfoI	TCCNGGA	1 cut(s)	855
PinAI	ACCGGT	1 cut(s)	229
PkrI	GCNGC	6 cut(s)	813, 1633, 1750, 2080, 2083, 2386
PleI	GAGTC	4 cut(s)	101, 492, 616, 2407
PpsI	GAGTC	4 cut(s)	101, 492, 616, 2407
PsiI	TTATAA	3 cut(s)	737, 879, 1775
Psp124BI	GAGCTC	1 cut(s)	688
Psp6I	CCWGG	3 cut(s)	465, 535, 855
PspGI	CCWGG	3 cut(s)	465, 535, 855
PspN4I	GGNNCC	5 cut(s)	202, 627, 1059, 1453, 1938
PspPI	GGNCC	1 cut(s)	947
PspXI	VCTCGAGB	1 cut(s)	687
PstI	CTGCAG	1 cut(s)	1730
PstNI	CAGNNNCTG	2 cut(s)	944, 978
PsuI	RGATCY	3 cut(s)	975, 1640, 1954
PvuII	CAGCTG	1 cut(s)	2476
RsaI	GTAC	2 cut(s)	495, 565
RsaNI	GTAC	2 cut(s)	494, 564
RseI	CAYNNNNRTG	3 cut(s)	785, 819, 1281
SacI	GAGCTC	1 cut(s)	688
SaqAI	TTAA	5 cut(s)	432, 651, 957, 1841, 2204
SatI	GCNGC	6 cut(s)	812, 1632, 1749, 2079, 2082, 2385
Sau3AI	GATC	5 cut(s)	13, 975, 1180, 1640, 1954
Sau96I	GGNCC	1 cut(s)	947
SchI	GAGTC	4 cut(s)	101, 493, 617, 2408
ScrFI	CCNGG	5 cut(s)	467, 537, 709, 857, 1501
SduI	GDGCHC	2 cut(s)	688, 792
SexAI	ACCWGGT	1 cut(s)	465
SfaNI	GCATC	1 cut(s)	1514
SfcI	CTRYAG	1 cut(s)	1726
Sfr274I	CTCGAG	1 cut(s)	687
SfuI	TTCGAA	2 cut(s)	143, 170
SinI	GGWCC	1 cut(s)	947
SlaI	CTCGAG	1 cut(s)	687
SmiMI	CAYNNNNRTG	3 cut(s)	785, 819, 1281
SmlI	CTYRAG	1 cut(s)	687
SmoI	CTYRAG	1 cut(s)	687
SphI	GCATGC	2 cut(s)	818, 1976
SsiI	CCGC	5 cut(s)	997, 1488, 1933, 2396, 2518
SspI	AATATT	1 cut(s)	2164
SspMI	CTAG	4 cut(s)	222, 402, 642, 725
SstI	GAGCTC	1 cut(s)	688
StyD4I	CCNGG	5 cut(s)	465, 535, 707, 855, 1499
StyI	CCWWGG	2 cut(s)	189, 1854
TaaI	ACNGT	7 cut(s)	493, 940, 1329, 1771, 1883, 2209, 2482
TaiI	ACGT	4 cut(s)	431, 1159, 1421, 1675
TaqII	GACCGA	1 cut(s)	601
TfiI	GAWTC	9 cut(s)	172, 415, 515, 577, 986, 1510, 1556, 1567, 2137
Tru1I	TTAA	5 cut(s)	432, 651, 957, 1841, 2204
Tru9I	TTAA	5 cut(s)	432, 651, 957, 1841, 2204
TscAI	CASTG	7 cut(s)	86, 352, 799, 1462, 1750, 2038, 2214
TseFI	GTSAC	4 cut(s)	542, 711, 1373, 1781
TseI	GCWGC	6 cut(s)	811, 1631, 1748, 2078, 2081, 2384
Tsp45I	GTSAC	4 cut(s)	542, 711, 1373, 1781
TspGWI	ACGGA	3 cut(s)	377, 744, 1021
TspRI	CASTG	7 cut(s)	86, 352, 799, 1462, 1750, 2038, 2214
Van91I	CCANNNNNTGG	1 cut(s)	232
VpaK11BI	GGWCC	1 cut(s)	947
XapI	RAATTY	5 cut(s)	292, 387, 1685, 1909, 2025
XceI	RCATGY	2 cut(s)	818, 1976
XhoI	CTCGAG	1 cut(s)	687
XmnI	GAANNNNTTC	3 cut(s)	514, 1566, 2164
XspI	CTAG	4 cut(s)	222, 402, 642, 725

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.