Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0003899

Physical Location & Seq

Genomic Coordinates Forward (+)

2870449 .. 2879606

Gene Structure 9158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1032100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

ATGGCCACTAAATTGTACCACAACGGCTTTCTATCTCCAAGCTCTTCAAATCCATGGCATTCGCGTAAACCAGCTACAATACATTATTCCTGCAATAAAGTGGTTGATTTGGATCACCTATTAAGTAGCTGGGCTTATTCAAAGAGAAGACGCCTTATAAGATTTTCTGTGTTAGAGCACAGTAATTGTTACAGTCTTAATCTCCGAGCAGCAGGCAATAGGAAACGCTATCTACATTTTCAAAAGTCCAGAGGAATGGATAGCCTAGTTCCACTGGCATCTGCTGATGATGGTGTTACGGTCAATGGGAGTCCCCAAGCAAGCACCAGAAGGGATGTTGAGGAGATAAAGGTCAAACTTAATCAATCATTTCAAGGTGAAGATTCTAGTGATGGACTTGTCCAATTTTTACATGAAGCAGCCAGGGTTTTTGAGTTAGCCATTAAGGAACAGGGTTCATTGTCAAAGTCTTCTTGGTTTTCAACTGCATGGCTTAGTGTAGACAAAAACGCCTGGCTAAAAACACTGTCTTATCAGGCTTCAGTGTATTCCTTATTGCAAGCAGCAAGCGAGATTGCATCTCGAGGGGATGGCAGAGACAGAGACATAAATGTCTTTGTCCAAAGGAGTTTATCAAGAGAATCTGCTTCCCTTGAGAGCTTAATCCGGGATCAACTATCAGCCAAGCAACCTGAAGCTTATGAGTGGTTTTTCTCTGAGCAAGTGTCCTTGGTGGTAACATCCTTTGTTAATTATTTTGAAGGCGACGCACGTTTTACTGCTGCAACCAATGTGTCTAGTAAGGGAACTCACTTGGGGTCTAGCAACACAAGTGACATATCTCTCCTCATGCTTGCACTGACATGCAATGCCGCAATTACAAAACTTGGGCAAGCAAAAGTTTCGTGCCCTCAATTCTTTTCGACAATCCCAGATATAACCGGTAGATTCATGGACATGCTGGTGGATTTCGTTCCTATTCGCCAGGCCTATCTTTCTCTAAAGAATATAGGTCTGCACAGGGAGTTCCTTGTCCATTTTGGTCCTCGAGCTGCAGCATGTAGAGTGAAAATTGATCAAGGTTCAGAAGAAGTTGTTTTCTGGGTGAATCTTGTACAGAAGCAGTTGCAGCGAGCTATAGATAGAGAGCGAATATGGTCAAGACTAACAACATCCGAAAGCATTGAGGTATTGGAGAGGGATCTGGCTATATTTGGATTCTTTATTGCCTTGGGTAGAAGCACGCAGTCCTTTCTATCAGCAAATGGATTTGATGTGTTAGCTGATCCGATTGGAGGCTTTGTGAGGTTCTTGATTGGGGGCAGCATCTTATACTATCCTCAGCTTTCGTCAATAAGTTCTTATCAATTGTATGTAGAGGTAGTCTGTGAAGAGCTGGACTGGCTTCCATTTTACCCAGGCATTTCAGGCACCCCTAAACAATCACATGGGCATCAAAGTAAATGGGAGGGACCTCCCAATTATGAAGCAATCCCCCAAGCTTTAGAAGTATGTTTCCAATGGATGCAGAGTTTTATTAAATACAGTAAATGGCTGGAGGACCCTTCTAATGTTAAGGCAGCGAGATTCTTGTCTAGAGGGCACAACAAATTAGTGGAGTGTATGGAAGAACGCGGTATATTAAAGAATGAAAATATGAAAAGCGGTGGCAATAACATTGTTGAGAGGACTAGGTCTGGAACTCGTACACCAGCTGAGAAAGAATTGGATACTTTTGACAAGGCCTTGGAGAGTGTTGAAGGAGCCGTCATAAGACTAGAAAAATTGCTTCAGGATTTACATGCATCAAATTCTAACTCAGGAAAAGAGCATATAAAAGCTGCTTGTTCTGACCTTGAGAAGATAAGGAAGCTTAAAAAAGAGGCTGAATTTCTGGAGGCATCTTTCAGAGCAAAAGCAGCTTCCCTTCAGCAGGAAGGTAATCTCTCCCAGTCTTCTACTAACAAGCAGCAACAGTTCTTTAAAGGGAAAAGCAGAAAGAATGAGGGCAACAGAGCTGCCAGTAACTCTCGCGGTTTGTGGAGCTTCCTATTGCGCCCTCCAACTGGAAAGCCCAATCCTGGGTTGATTGTGGATCAATCTGATAATGAACTTATTGAGCAGACTGTTTCAAGTCTTGAATTTGAAGACCCAGAATCAAATAGGATCCAGCGTTTTGAGCTTTTACGGAATGAGCTGATAGAACTTGAAAAACGGGTGCAAAGGAGTGCTGATCATCCTGAAAATGAGGAGGATCTTAAGCCTGCTGATGATAGTCCTAACTACGAGGATGATGTTGGAGCTGCTCAACTAGTCCAGGTTCTGAAGAAAGAGAATATCATTGAAAAATCGATTGACAAGCTAAAAGAAGCTAGCACGGATGTGTGGCAAGGAACTCAATTGCTAGCTATTGATGTTGGTGCTGCTACGGGGTTGCTTAGAAGGGTCTTGATTGGAGATGAACTGACAGAAAAAGAAAAGAAAGTTCTACAGAGAACTCTGACCGACTTAGCATCAGTTGTTCCTATTGGTGTTTTAATGCTTCTTCCGGTCACTGCGGTTGGACATGCAGCAATGTTGGCTGCTATTCAGAGATATGTACCAGCTCTGATACCATCAACATATGGTCCGGAAAGGTTGAATCTCCTGAGGCAGGTTGAGAAATTGAAGGAAATGGAAAGCAGTGAAGACAGTTCCAACGTAAGCGTGGAGGAACTAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LETM1

Protein Analysis

908

Amino Acids

101.57

Weight (kDa)

6.35

Isoelectric Point (pI)

44.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003899)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11560 AT3G11560 AT3G11560 AT3G11560 AT3G11560 AT5G06220 AT5G06220 AT5G06220
fragaria_vesca	FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540 FvH4_6g19540
malus_domestica	MD12G1031800.v1.1 MD14G1032100.v1.1
prunus_persica	Prupe.7G100800_v2.0.a1 Prupe.7G100800_v2.0.a1
pyrus_communis	pycom14g02890
rosa_chinensis	RchiOBHm_Chr3g0474881
rosa_laevigata	RLG00000023884
rosa_multiflora	Rmu_co8463519.1_g000001 Rmu_sc0008866.1_g000001 Rmu_sc0022080.1_g000001 Rmu_sc0022081.1_g000001
rosa_roxburghii	Rroxscaffold_6G00406770
rosa_rugosa	Rorug03G0145100
rosa_samantha	Rh3AG194700 Rh3BG224500 Rh3CG219600 Rh3DG220200
rosa_wichuraiana	Rw3G017720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	158
AasI	GACNNNNNNGTC	1 cut(s)	611
Acc36I	ACCTGC	1 cut(s)	2644
AccB1I	GGYRCC	1 cut(s)	1430
AccI	GTMKAC	1 cut(s)	501
AccII	CGCG	3 cut(s)	64, 1635, 2034
AccIII	TCCGGA	1 cut(s)	2629
AciI	CCGC	5 cut(s)	873, 1635, 1665, 2034, 2558
AclWI	GGATC	8 cut(s)	120, 678, 1209, 1280, 2103, 2161, 2174, 2262
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	1810, 1889, 2141
AcuI	CTGAAG	5 cut(s)	525, 714, 1775, 1913, 2345
AcyI	GRCGYC	1 cut(s)	151
AfaI	GTAC	4 cut(s)	17, 1116, 1708, 2601
AfiI	CCNNNNNNNGG	6 cut(s)	1295, 1933, 2066, 2081, 2082, 2653
AflII	CTTAAG	1 cut(s)	2258
AgeI	ACCGGT	1 cut(s)	941
AhlI	ACTAGT	1 cut(s)	2311
AjnI	CCWGG	6 cut(s)	422, 512, 984, 1417, 2080, 2316
AleI	CACNNNNGTG	1 cut(s)	2381
Alw21I	GWGCWC	1 cut(s)	180
Alw26I	GTCTC	2 cut(s)	591, 597
AlwI	GGATC	8 cut(s)	120, 678, 1209, 1280, 2103, 2161, 2174, 2262
AlwNI	CAGNNNCTG	1 cut(s)	2323
Ama87I	CYCGRG	2 cut(s)	582, 1047
Aor13HI	TCCGGA	1 cut(s)	2629
AoxI	GGCC	3 cut(s)	3, 987, 1743
ApoI	RAATTY	3 cut(s)	1810, 1889, 2141
AsiGI	ACCGGT	1 cut(s)	941
AspLEI	GCGC	1 cut(s)	2058
AspS9I	GGNCC	4 cut(s)	1043, 1472, 1561, 2627
AsuC2I	CCSGG	1 cut(s)	668
AsuHPI	GGTGA	3 cut(s)	107, 389, 1117
AsuNHI	GCTAGC	2 cut(s)	2372, 2404
AvaI	CYCGRG	2 cut(s)	582, 1047
AvaII	GGWCC	4 cut(s)	1043, 1472, 1561, 2627
AxyI	CCTNAGG	1 cut(s)	2648
BaeGI	GKGCMC	2 cut(s)	911, 1605
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	2166
BanI	GGYRCC	1 cut(s)	1430
BbsI	GAAGAC	5 cut(s)	154, 462, 1947, 2154, 2694
Bbv12I	GWGCWC	1 cut(s)	180
BbvCI	CCTCAGC	1 cut(s)	1341
BccI	CCATC	4 cut(s)	284, 386, 584, 2623
BceAI	ACGGC	2 cut(s)	40, 1751
BcgI	CGANNNNNNTGC	2 cut(s)	885, 919
BciT130I	CCWGG	6 cut(s)	424, 514, 986, 1419, 2082, 2318
BciVI	GTATCC	1 cut(s)	1723
BclI	TGATCA	2 cut(s)	1075, 2233
BcnI	CCSGG	1 cut(s)	668
BcoDI	GTCTC	2 cut(s)	591, 597
BcuI	ACTAGT	1 cut(s)	2311
BfmI	CTRYAG	3 cut(s)	1053, 1137, 2489
BfrI	CTTAAG	1 cut(s)	2258
BfuAI	ACCTGC	1 cut(s)	2644
BfuI	GTATCC	1 cut(s)	1723
Bme1390I	CCNGG	7 cut(s)	424, 514, 668, 986, 1419, 2082, 2318
Bme18I	GGWCC	4 cut(s)	1043, 1472, 1561, 2627
BmeT110I	CYCGRG	2 cut(s)	582, 1047
BmgT120I	GGNCC	4 cut(s)	1043, 1472, 1561, 2627
BmiI	GGNNCC	5 cut(s)	1432, 1473, 1563, 1765, 2168
BmrFI	CCNGG	7 cut(s)	424, 514, 668, 986, 1419, 2082, 2318
BmrI	ACTGGG	1 cut(s)	1945
BmsI	GCATC	8 cut(s)	287, 587, 1335, 1462, 1515, 1814, 1910, 2522
BmtI	GCTAGC	2 cut(s)	2376, 2408
BmuI	ACTGGG	1 cut(s)	1945
BpiI	GAAGAC	5 cut(s)	154, 462, 1947, 2154, 2694
BpmI	CTGGAG	2 cut(s)	1577, 1916
Bpu10I	CCTNAGC	1 cut(s)	1341
BpuEI	CTTGAG	2 cut(s)	674, 1877
BpuMI	CCSGG	1 cut(s)	668
Bsa29I	ATCGAT	1 cut(s)	2351
BsaBI	GATNNNNATC	1 cut(s)	111
BsaHI	GRCGYC	1 cut(s)	151
BsaJI	CCNNGG	7 cut(s)	53, 423, 729, 1230, 1417, 1746, 2081
BsaWI	WCCGGW	3 cut(s)	941, 2548, 2629
BsaXI	ACNNNNNCTCC	2 cut(s)	1287, 1317
Bsc4I	CCNNNNNNNGG	6 cut(s)	1295, 1933, 2066, 2081, 2082, 2653
Bse118I	RCCGGY	1 cut(s)	941
Bse1I	ACTGG	5 cut(s)	279, 1406, 1951, 2022, 2071
Bse21I	CCTNAGG	1 cut(s)	2648
Bse3DI	GCAATG	2 cut(s)	874, 2580
Bse8I	GATNNNNATC	1 cut(s)	111
BseAI	TCCGGA	1 cut(s)	2629
BseBI	CCWGG	6 cut(s)	424, 514, 986, 1419, 2082, 2318
BseCI	ATCGAT	1 cut(s)	2351
BseDI	CCNNGG	7 cut(s)	53, 423, 729, 1230, 1417, 1746, 2081
BseGI	GGATG	8 cut(s)	340, 595, 740, 1172, 1530, 2236, 2296, 2386
BseJI	GATNNNNATC	1 cut(s)	111
BseLI	CCNNNNNNNGG	6 cut(s)	1295, 1933, 2066, 2081, 2082, 2653
BseMI	GCAATG	2 cut(s)	874, 2580
BseMII	CTCAG	5 cut(s)	708, 1355, 1707, 1833, 2639
BseNI	ACTGG	5 cut(s)	279, 1406, 1951, 2022, 2071
BseRI	GAGGAG	3 cut(s)	356, 836, 2264
BseSI	GKGCMC	2 cut(s)	911, 1605
BseYI	CCCAGC	1 cut(s)	129
BsgI	GTGCAG	1 cut(s)	1001
Bsh1236I	CGCG	3 cut(s)	64, 1635, 2034
BshFI	GGCC	3 cut(s)	5, 989, 1745
BshNI	GGYRCC	1 cut(s)	1430
BshTI	ACCGGT	1 cut(s)	941
BshVI	ATCGAT	1 cut(s)	2351
BsiHKAI	GWGCWC	1 cut(s)	180
BsiHKCI	CYCGRG	2 cut(s)	582, 1047
BsiSI	CCGG	4 cut(s)	667, 942, 2549, 2630
BslFI	GGGAC	2 cut(s)	297, 1485
BslI	CCNNNNNNNGG	6 cut(s)	1295, 1933, 2066, 2081, 2082, 2653
BsmAI	GTCTC	2 cut(s)	591, 597
BsmFI	GGGAC	2 cut(s)	297, 1485
BsmI	GAATGC	1 cut(s)	58
BsnI	GGCC	3 cut(s)	5, 989, 1745
BsoBI	CYCGRG	2 cut(s)	582, 1047
Bsp1286I	GDGCHC	3 cut(s)	180, 911, 1605
Bsp13I	TCCGGA	1 cut(s)	2629
Bsp1407I	TGTACA	1 cut(s)	1114
Bsp143I	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
Bsp19I	CCATGG	1 cut(s)	53
BspACI	CCGC	5 cut(s)	873, 1635, 1665, 2034, 2558
BspANI	GGCC	3 cut(s)	5, 989, 1745
BspCNI	CTCAG	5 cut(s)	709, 1354, 1708, 1832, 2640
BspDI	ATCGAT	1 cut(s)	2351
BspEI	TCCGGA	1 cut(s)	2629
BspFNI	CGCG	3 cut(s)	64, 1635, 2034
BspLI	GGNNCC	5 cut(s)	1432, 1473, 1563, 1765, 2168
BspMAI	CTGCAG	1 cut(s)	1057
BspMI	ACCTGC	1 cut(s)	2644
BspOI	GCTAGC	2 cut(s)	2376, 2408
BspPI	GGATC	8 cut(s)	120, 678, 1209, 1280, 2103, 2161, 2174, 2262
BspQI	GCTCTTC	2 cut(s)	49, 1386
BspT107I	GGYRCC	1 cut(s)	1430
BspTI	CTTAAG	1 cut(s)	2258
BsrDI	GCAATG	2 cut(s)	874, 2580
BsrFI	RCCGGY	1 cut(s)	941
BsrGI	TGTACA	1 cut(s)	1114
BsrI	ACTGG	5 cut(s)	279, 1406, 1951, 2022, 2071
BssAI	RCCGGY	1 cut(s)	941
BssECI	CCNNGG	7 cut(s)	53, 423, 729, 1230, 1417, 1746, 2081
BssMI	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
BssNI	GRCGYC	1 cut(s)	151
BssT1I	CCWWGG	4 cut(s)	53, 729, 1230, 1746
Bst2UI	CCWGG	6 cut(s)	424, 514, 986, 1419, 2082, 2318
Bst4CI	ACNGT	8 cut(s)	182, 194, 301, 528, 1547, 1977, 2128, 2693
Bst6I	CTCTTC	2 cut(s)	49, 1386
BstACI	GRCGYC	1 cut(s)	151
BstAFI	CTTAAG	1 cut(s)	2258
BstAUI	TGTACA	1 cut(s)	1114
BstDEI	CTNAG	8 cut(s)	494, 717, 1341, 1716, 1819, 2438, 2509, 2648
BstDSI	CCRYGG	1 cut(s)	53
BstENI	CCTNNNNNAGG	2 cut(s)	1931, 2651
BstF5I	GGATG	8 cut(s)	340, 595, 740, 1172, 1530, 2236, 2296, 2386
BstFNI	CGCG	3 cut(s)	64, 1635, 2034
BstHHI	GCGC	1 cut(s)	2058
BstKTI	GATC	9 cut(s)	115, 673, 1078, 1204, 1288, 2098, 2169, 2236, 2257
BstMAI	GTCTC	2 cut(s)	591, 597
BstMBI	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
BstMWI	GCNNNNNNNGC	6 cut(s)	1129, 1402, 1428, 1919, 2179, 2579
BstNI	CCWGG	6 cut(s)	424, 514, 986, 1419, 2082, 2318
BstNSI	RCATGY	5 cut(s)	867, 961, 1062, 1805, 2570
BstSCI	CCNGG	7 cut(s)	422, 512, 666, 984, 1417, 2080, 2316
BstSFI	CTRYAG	3 cut(s)	1053, 1137, 2489
BstSLI	GKGCMC	2 cut(s)	911, 1605
BstUI	CGCG	3 cut(s)	64, 1635, 2034
BstV2I	GAAGAC	5 cut(s)	154, 462, 1947, 2154, 2694
BstX2I	RGATCY	3 cut(s)	1201, 2166, 2254
BstXI	CCANNNNNNTGG	1 cut(s)	256
BstYI	RGATCY	3 cut(s)	1201, 2166, 2254
Bsu15I	ATCGAT	1 cut(s)	2351
Bsu36I	CCTNAGG	1 cut(s)	2648
BsuI	GTATCC	1 cut(s)	1723
BsuRI	GGCC	3 cut(s)	5, 989, 1745
BsuTUI	ATCGAT	1 cut(s)	2351
BtgI	CCRYGG	1 cut(s)	53
BtsCI	GGATG	8 cut(s)	340, 595, 740, 1172, 1530, 2236, 2296, 2386
BtsI	GCAGTG	2 cut(s)	2553, 2689
BtsIMutI	CAGTG	6 cut(s)	272, 524, 549, 857, 2553, 2689
BveI	ACCTGC	1 cut(s)	2644
CaiI	CAGNNNCTG	1 cut(s)	2323
CfoI	GCGC	1 cut(s)	2058
Cfr10I	RCCGGY	1 cut(s)	941
Cfr13I	GGNCC	4 cut(s)	1043, 1472, 1561, 2627
ClaI	ATCGAT	1 cut(s)	2351
CseI	GACGC	2 cut(s)	159, 776
Csp6I	GTAC	4 cut(s)	16, 1115, 1707, 2600
CspAI	ACCGGT	1 cut(s)	941
CviQI	GTAC	4 cut(s)	16, 1115, 1707, 2600
DdeI	CTNAG	8 cut(s)	494, 717, 1341, 1716, 1819, 2438, 2509, 2648
DpnI	GATC	9 cut(s)	114, 672, 1077, 1203, 1287, 2097, 2168, 2235, 2256
DpnII	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
DraI	TTTAAA	1 cut(s)	1984
DrdI	GACNNNNNNGTC	1 cut(s)	611
DseDI	GACNNNNNNGTC	1 cut(s)	611
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	49, 1386
EarI	CTCTTC	2 cut(s)	49, 1386
Eco130I	CCWWGG	4 cut(s)	53, 729, 1230, 1746
Eco147I	AGGCCT	2 cut(s)	989, 1745
Eco47I	GGWCC	4 cut(s)	1043, 1472, 1561, 2627
Eco57I	CTGAAG	5 cut(s)	525, 714, 1775, 1913, 2345
Eco81I	CCTNAGG	1 cut(s)	2648
Eco88I	CYCGRG	2 cut(s)	582, 1047
EcoNI	CCTNNNNNAGG	2 cut(s)	1931, 2651
EcoO109I	RGGNCCY	2 cut(s)	1472, 1561
EcoRII	CCWGG	6 cut(s)	422, 512, 984, 1417, 2080, 2316
EcoT14I	CCWWGG	4 cut(s)	53, 729, 1230, 1746
EcoT22I	ATGCAT	1 cut(s)	1807
ErhI	CCWWGG	4 cut(s)	53, 729, 1230, 1746
FaqI	GGGAC	2 cut(s)	297, 1485
FauNDI	CATATG	1 cut(s)	2623
FbaI	TGATCA	2 cut(s)	1075, 2233
FblI	GTMKAC	1 cut(s)	501
FokI	GGATG	8 cut(s)	347, 602, 727, 1159, 1537, 2223, 2303, 2393
GlaI	GCGC	1 cut(s)	2057
GsaI	CCCAGC	1 cut(s)	133
GsuI	CTGGAG	2 cut(s)	1577, 1916
HaeIII	GGCC	3 cut(s)	5, 989, 1745
HapII	CCGG	4 cut(s)	667, 942, 2549, 2630
HgaI	GACGC	2 cut(s)	159, 776
HhaI	GCGC	1 cut(s)	2058
Hin1I	GRCGYC	1 cut(s)	151
Hin6I	GCGC	1 cut(s)	2056
HinP1I	GCGC	1 cut(s)	2056
HindIII	AAGCTT	3 cut(s)	696, 1500, 1871
HinfI	GANTC	9 cut(s)	310, 383, 641, 948, 1108, 1218, 1587, 2156, 2641
HpaII	CCGG	4 cut(s)	667, 942, 2549, 2630
HphI	GGTGA	3 cut(s)	107, 389, 1117
Hpy166II	GTNNAC	3 cut(s)	68, 502, 1709
Hpy8I	GTNNAC	3 cut(s)	68, 502, 1709
Hpy99I	CGWCG	1 cut(s)	770
HpyAV	CCTTC	8 cut(s)	324, 755, 1575, 1754, 1931, 1937, 2436, 2662
HpyCH4III	ACNGT	8 cut(s)	182, 194, 301, 528, 1547, 1977, 2128, 2693
HpyCH4IV	ACGT	2 cut(s)	772, 2700
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1129, 1402, 1428, 1919, 2179, 2579
HpyF3I	CTNAG	8 cut(s)	494, 717, 1341, 1716, 1819, 2438, 2509, 2648
HpySE526I	ACGT	2 cut(s)	772, 2700
Hsp92I	GRCGYC	1 cut(s)	151
HspAI	GCGC	1 cut(s)	2056
Kpn2I	TCCGGA	1 cut(s)	2629
Ksp22I	TGATCA	2 cut(s)	1075, 2233
Kzo9I	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
LguI	GCTCTTC	2 cut(s)	49, 1386
LmnI	GCTCC	3 cut(s)	1763, 2043, 2300
LweI	GCATC	8 cut(s)	287, 587, 1335, 1462, 1515, 1814, 1910, 2522
MaeII	ACGT	2 cut(s)	772, 2700
MaeIII	GTNAC	6 cut(s)	188, 295, 736, 833, 2024, 2551
MalI	GATC	9 cut(s)	114, 672, 1077, 1203, 1287, 2097, 2168, 2235, 2256
MboI	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
MfeI	CAATTG	2 cut(s)	1367, 2399
MflI	RGATCY	3 cut(s)	1201, 2166, 2254
MhlI	GDGCHC	3 cut(s)	180, 911, 1605
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	319
MmeI	TCCRAC	4 cut(s)	2087, 2278, 2542, 2721
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1807
MroI	TCCGGA	1 cut(s)	2629
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	4 cut(s)	862, 956, 962, 2381
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1715
MspCI	CTTAAG	1 cut(s)	2258
MspI	CCGG	4 cut(s)	667, 942, 2549, 2630
MspR9I	CCNGG	7 cut(s)	424, 514, 668, 986, 1419, 2082, 2318
MunI	CAATTG	2 cut(s)	1367, 2399
Mva1269I	GAATGC	1 cut(s)	58
MvaI	CCWGG	6 cut(s)	424, 514, 986, 1419, 2082, 2318
MvnI	CGCG	3 cut(s)	64, 1635, 2034
MwoI	GCNNNNNNNGC	6 cut(s)	1129, 1402, 1428, 1919, 2179, 2579
NciI	CCSGG	1 cut(s)	668
NcoI	CCATGG	1 cut(s)	53
NdeI	CATATG	1 cut(s)	2623
NdeII	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
NheI	GCTAGC	2 cut(s)	2372, 2404
NlaIV	GGNNCC	5 cut(s)	1432, 1473, 1563, 1765, 2168
NmuCI	GTSAC	2 cut(s)	833, 2551
NsiI	ATGCAT	1 cut(s)	1807
NspI	RCATGY	5 cut(s)	867, 961, 1062, 1805, 2570
OliI	CACNNNNGTG	1 cut(s)	2381
PaeR7I	CTCGAG	2 cut(s)	582, 1047
PceI	AGGCCT	2 cut(s)	989, 1745
PciSI	GCTCTTC	2 cut(s)	49, 1386
PctI	GAATGC	1 cut(s)	58
PfeI	GAWTC	8 cut(s)	383, 641, 948, 1108, 1218, 1587, 2156, 2641
PflFI	GACNNNGTC	1 cut(s)	1693
PfoI	TCCNGGA	1 cut(s)	666
PinAI	ACCGGT	1 cut(s)	941
PleI	GAGTC	1 cut(s)	318
PpsI	GAGTC	1 cut(s)	318
PpuMI	RGGWCCY	2 cut(s)	1472, 1561
PsiI	TTATAA	1 cut(s)	158
Psp5II	RGGWCCY	2 cut(s)	1472, 1561
Psp6I	CCWGG	6 cut(s)	422, 512, 984, 1417, 2080, 2316
PspFI	CCCAGC	1 cut(s)	129
PspGI	CCWGG	6 cut(s)	422, 512, 984, 1417, 2080, 2316
PspN4I	GGNNCC	5 cut(s)	1432, 1473, 1563, 1765, 2168
PspPI	GGNCC	4 cut(s)	1043, 1472, 1561, 2627
PspPPI	RGGWCCY	2 cut(s)	1472, 1561
PspXI	VCTCGAGB	1 cut(s)	1047
PstI	CTGCAG	1 cut(s)	1057
PstNI	CAGNNNCTG	1 cut(s)	2323
PsuI	RGATCY	3 cut(s)	1201, 2166, 2254
PsyI	GACNNNGTC	1 cut(s)	1693
PvuII	CAGCTG	1 cut(s)	1715
RsaI	GTAC	4 cut(s)	17, 1116, 1708, 2601
RsaNI	GTAC	4 cut(s)	16, 1115, 1707, 2600
RseI	CAYNNNNRTG	4 cut(s)	862, 956, 962, 2381
SapI	GCTCTTC	2 cut(s)	49, 1386
Sau3AI	GATC	9 cut(s)	112, 670, 1075, 1201, 1285, 2095, 2166, 2233, 2254
Sau96I	GGNCC	4 cut(s)	1043, 1472, 1561, 2627
SchI	GAGTC	1 cut(s)	319
ScrFI	CCNGG	7 cut(s)	424, 514, 668, 986, 1419, 2082, 2318
SduI	GDGCHC	3 cut(s)	180, 911, 1605
SfaNI	GCATC	8 cut(s)	287, 587, 1335, 1462, 1515, 1814, 1910, 2522
SfcI	CTRYAG	3 cut(s)	1053, 1137, 2489
Sfr274I	CTCGAG	2 cut(s)	582, 1047
SinI	GGWCC	4 cut(s)	1043, 1472, 1561, 2627
SlaI	CTCGAG	2 cut(s)	582, 1047
SmiMI	CAYNNNNRTG	4 cut(s)	862, 956, 962, 2381
SmlI	CTYRAG	5 cut(s)	582, 653, 1047, 1856, 2258
SmoI	CTYRAG	5 cut(s)	582, 653, 1047, 1856, 2258
SpeI	ACTAGT	1 cut(s)	2311
SseBI	AGGCCT	2 cut(s)	989, 1745
SsiI	CCGC	5 cut(s)	873, 1635, 1665, 2034, 2558
StuI	AGGCCT	2 cut(s)	989, 1745
StyD4I	CCNGG	7 cut(s)	422, 512, 666, 984, 1417, 2080, 2316
StyI	CCWWGG	4 cut(s)	53, 729, 1230, 1746
TaaI	ACNGT	8 cut(s)	182, 194, 301, 528, 1547, 1977, 2128, 2693
TaiI	ACGT	2 cut(s)	775, 2703
TaqI	TCGA	4 cut(s)	583, 923, 1048, 2351
TaqII	GACCGA	1 cut(s)	2519
TatI	WGTACW	1 cut(s)	1114
TauI	GCSGC	1 cut(s)	875
TfiI	GAWTC	8 cut(s)	383, 641, 948, 1108, 1218, 1587, 2156, 2641
TscAI	CASTG	6 cut(s)	279, 531, 549, 864, 2560, 2689
TseFI	GTSAC	2 cut(s)	833, 2551
Tsp45I	GTSAC	2 cut(s)	833, 2551
TspDTI	ATGAA	8 cut(s)	429, 447, 940, 1500, 1665, 1673, 2124, 2475
TspGWI	ACGGA	2 cut(s)	2203, 2393
TspRI	CASTG	6 cut(s)	279, 531, 549, 864, 2560, 2689
Tth111I	GACNNNGTC	1 cut(s)	1693
Vha464I	CTTAAG	1 cut(s)	2258
VpaK11BI	GGWCC	4 cut(s)	1043, 1472, 1561, 2627
XagI	CCTNNNNNAGG	2 cut(s)	1931, 2651
XapI	RAATTY	3 cut(s)	1810, 1889, 2141
XbaI	TCTAGA	1 cut(s)	1595
XceI	RCATGY	5 cut(s)	867, 961, 1062, 1805, 2570
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2704
XhoI	CTCGAG	2 cut(s)	582, 1047
XmiI	GTMKAC	1 cut(s)	501
Zsp2I	ATGCAT	1 cut(s)	1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.