AT5G08570

Belongs to the pyruvate kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
2778000 .. 2780581
2582 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G08570.3

Sequence Viewer

Length: 1533 bp
ATGTCGAACATAGACATAGAAGGGATCTTGAAGGAGCTACCTAATGATGGGAGGATCCCAAAGACGAAGATAGTTTGCACATTAGGACCAGCTTCTCGCACTGTTTCCATGATCGAAAAGCTTTTGAAAGCCGGTATGAATGTGGCTCGCTTCAACTTCTCACATGGAAGCCATGAATACCATCAAGAGACACTCGACAACCTCCGCTCTGCTATGCATAATACCGGCATTCTCGCTGCTGTCATGCTTGATACTAAGGGGCCTGAGATTCGTACTGGTTTCTTGAAAGATGGGAACCCTATACAACTGAAGGAAGGTCAAGAGATTACTATAACCACTGATTATGACATTCAAGGAGACGAATCAACGATATCCATGAGCTATAAAAAGCTGCCTTTGGATGTGAAGCCCGGAAACACCATACTCTGTGCAGATGGAAGCATAAGTCTAGCTGTCTTGTCATGTGATCCTGAGTCTGGAACTGTTAGGTGCCGGTGTGAAAACTCGGCGATGCTTGGTGAAAGAAAGAATGTGAATCTTCCTGGCGTTGTTGTTGATCTTCCCACTTTGACAGATAAGGATATTGAAGATATTCTCGGTTGGGGTGTTCCGAACAGCATTGATATGATTGCTCTTTCGTTTGTCCGTAAAGGTTCGGATCTTGTTAATGTCCGCAAGGTTCTTGGATCTCATGCTAAAAGCATAATGCTCATGTCAAAGGTTGAGAACCAGGAAGGTGTGATTAACTTTGATGAGATCTTGCGTGAAACAGATGCGTTCATGGTTGCCCGTGGTGATCTCGGGATGGAGATTCCGATAGAGAAGATCTTCTTGGCTCAAAAGTTGATGATCTACAAGTGTAACCTTGCGGGTAAACCGGTGGTCACAGCCACTCAGATGCTGGAGTCAATGATCAAATCACCTCGGCCAACCCGAGCTGAAGCCACAGATGTTGCAAATGCTGTTCTTGATGGTACTGACTGTGTGATGCTTAGCGGTGAGAGTGCAGCAGGAGCTTATCCGGAAATAGCTGTGAAAGTCATGGCTAAGATCTGCATTGAAGCCGAATCCTCGCTTGATTACAACACAATCTTTAAAGAGATGATCCGAGCAACTCCACTTCCAATGAGCCCACTCGAGAGTCTTGCATCATCCGCTGTACGGACTGCTAACAAAGCGAGGGCAAAACTCATCATTGTGTTGACACGTGGAGGTTCAACTGCTAATCTCGTGGCTAAATACAGACCGGCTGTTCCGATTCTGTCAGTGGTTGTCCCGGTTATGACCACTGATTCCTTTGACTGGTCTTGTAGTGACGAGTCACCTGCAAGGCATAGTCTGATATACAGAGGTCTAATCCCTATGTTGGCTGAAGGATCTGCAAAGGCAACAGATAGTGAAGCCACCGAAGTTATCATTGAAGCTGCTCTGAAGTCGGCTACTCAGAGAGGACTGTGCAACCGTGGTGATGCAATCGTGGCGCTGCACCGTATTGGAGCTGCCTCAGTTATTAAGATCTGTGTGGTTAAGTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

510

Amino Acids

54.98

Weight (kDa)

5.93

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK PF00224 20 - 345 1.5e-148 Pyruvate kinase, barrel domain
PK_C PF02887 380 - 498 1.7e-21 Pyruvate kinase, alpha/beta domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0009829)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1333
Acc36I ACCTGC 1 cut(s) 1333
AccB1I GGYRCC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 207
AccIII TCCGGA 1 cut(s) 1021
AciI CCGC 5 cut(s) 205, 673, 869, 996, 1155
AclWI GGATC 8 cut(s) 32, 49, 62, 461, 666, 694, 1099, 1384
AcoI YGGCCR 1 cut(s) 926
AcuI CTGAAG 4 cut(s) 329, 960, 1392, 1451
AcvI CACGTG 1 cut(s) 1208
AfaI GTAC 3 cut(s) 274, 976, 1161
AfiI CCNNNNNNNGG 5 cut(s) 47, 476, 1161, 1302, 1366
AflIII ACRYGT 1 cut(s) 1205
AgeI ACCGGT 1 cut(s) 877
AgsI TTSAA 9 cut(s) 31, 127, 154, 286, 353, 587, 1061, 1218, 1421
AjnI CCWGG 2 cut(s) 541, 729
AjuI GAANNNNNNNTTGG 2 cut(s) 815, 847
Alw26I GTCTC 2 cut(s) 182, 351
AlwI GGATC 8 cut(s) 32, 49, 62, 461, 666, 694, 1099, 1384
AlwNI CAGNNNCTG 1 cut(s) 901
Ama87I CYCGRG 3 cut(s) 800, 933, 1136
Aor13HI TCCGGA 1 cut(s) 1021
AoxI GGCC 2 cut(s) 260, 926
ApeKI GCWGC 6 cut(s) 236, 391, 1007, 1424, 1483, 1499
AsiGI ACCGGT 1 cut(s) 877
Asp700I GAANNNNTTC 2 cut(s) 591, 827
AspLEI GCGC 1 cut(s) 1483
AspS9I GGNCC 2 cut(s) 86, 260
AsuC2I CCSGG 2 cut(s) 411, 1277
AsuHPI GGTGA 6 cut(s) 530, 806, 912, 1010, 1314, 1478
AvaI CYCGRG 3 cut(s) 800, 933, 1136
AvaII GGWCC 1 cut(s) 86
BamHI GGATCC 1 cut(s) 54
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 1133
BauI CACGAG 1 cut(s) 1229
BbrPI CACGTG 1 cut(s) 1208
BbvI GCAGC 6 cut(s) 223, 378, 1019, 1411, 1470, 1486
BccI CCATC 6 cut(s) 41, 189, 284, 428, 799, 965
BcgI CGANNNNNNTGC 4 cut(s) 1127, 1161, 1307, 1341
BciT130I CCWGG 2 cut(s) 543, 731
BclI TGATCA 1 cut(s) 912
BcnI CCSGG 2 cut(s) 411, 1277
BcoDI GTCTC 2 cut(s) 182, 351
BfaI CTAG 1 cut(s) 449
BfoI RGCGCY 1 cut(s) 1484
BfuAI ACCTGC 1 cut(s) 1333
BglII AGATCT 4 cut(s) 756, 825, 1050, 1515
BisI GCNGC 6 cut(s) 237, 392, 1008, 1425, 1484, 1500
BlpI GCTNAGC 1 cut(s) 992
BlsI GCNGC 6 cut(s) 238, 393, 1009, 1426, 1485, 1501
Bme1390I CCNGG 4 cut(s) 411, 543, 731, 1277
Bme18I GGWCC 1 cut(s) 86
BmeT110I CYCGRG 3 cut(s) 800, 933, 1136
BmgT120I GGNCC 2 cut(s) 86, 260
BmiI GGNNCC 4 cut(s) 56, 261, 296, 491
BmrFI CCNGG 4 cut(s) 411, 543, 731, 1277
BmsI GCATC 6 cut(s) 501, 763, 888, 978, 1157, 1459
BpmI CTGGAG 1 cut(s) 923
Bpu1102I GCTNAGC 1 cut(s) 992
BpuMI CCSGG 2 cut(s) 411, 1277
BsaAI YACGTR 1 cut(s) 1208
BsaJI CCNNGG 3 cut(s) 790, 923, 1462
BsaWI WCCGGW 2 cut(s) 877, 1021
Bsc4I CCNNNNNNNGG 5 cut(s) 47, 476, 1161, 1302, 1366
Bse118I RCCGGY 5 cut(s) 131, 224, 492, 877, 1246
Bse1I ACTGG 2 cut(s) 280, 1307
BseAI TCCGGA 1 cut(s) 1021
BseBI CCWGG 2 cut(s) 543, 731
BseDI CCNNGG 3 cut(s) 790, 923, 1462
BseGI GGATG 3 cut(s) 406, 810, 1151
BseLI CCNNNNNNNGG 5 cut(s) 47, 476, 1161, 1302, 1366
BseMII CTCAG 5 cut(s) 255, 462, 908, 1457, 1518
BseNI ACTGG 2 cut(s) 280, 1307
BseXI GCAGC 6 cut(s) 223, 378, 1019, 1411, 1470, 1486
BsgI GTGCAG 3 cut(s) 450, 1026, 1469
BshFI GGCC 2 cut(s) 262, 928
BshNI GGYRCC 1 cut(s) 489
BshTI ACCGGT 1 cut(s) 877
BsiHKCI CYCGRG 3 cut(s) 800, 933, 1136
BsiSI CCGG 8 cut(s) 132, 225, 411, 493, 878, 1022, 1247, 1277
BslFI GGGAC 1 cut(s) 1259
BslI CCNNNNNNNGG 5 cut(s) 47, 476, 1161, 1302, 1366
BsmAI GTCTC 2 cut(s) 182, 351
BsmBI CGTCTC 1 cut(s) 351
BsmFI GGGAC 1 cut(s) 1259
BsmI GAATGC 1 cut(s) 228
BsnI GGCC 2 cut(s) 262, 928
BsoBI CYCGRG 3 cut(s) 800, 933, 1136
Bsp1286I GDGCHC 1 cut(s) 1133
Bsp13I TCCGGA 1 cut(s) 1021
Bsp1720I GCTNAGC 1 cut(s) 992
BspACI CCGC 5 cut(s) 205, 673, 869, 996, 1155
BspANI GGCC 2 cut(s) 262, 928
BspCNI CTCAG 5 cut(s) 256, 463, 907, 1456, 1517
BspEI TCCGGA 1 cut(s) 1021
BspLI GGNNCC 4 cut(s) 56, 261, 296, 491
BspMI ACCTGC 1 cut(s) 1333
BspPI GGATC 8 cut(s) 32, 49, 62, 461, 666, 694, 1099, 1384
BspT107I GGYRCC 1 cut(s) 489
BsrBI CCGCTC 1 cut(s) 207
BsrFI RCCGGY 5 cut(s) 131, 224, 492, 877, 1246
BsrI ACTGG 2 cut(s) 280, 1307
BssAI RCCGGY 5 cut(s) 131, 224, 492, 877, 1246
BssECI CCNNGG 3 cut(s) 790, 923, 1462
BssSI CACGAG 1 cut(s) 1229
Bst2BI CACGAG 1 cut(s) 1229
Bst2UI CCWGG 2 cut(s) 543, 731
Bst4CI ACNGT 6 cut(s) 103, 484, 983, 1455, 1463, 1490
BstBAI YACGTR 1 cut(s) 1208
BstC8I GCNNGC 1 cut(s) 148
BstDEI CTNAG 8 cut(s) 255, 264, 471, 894, 992, 1047, 1443, 1504
BstDSI CCRYGG 2 cut(s) 790, 1462
BstF5I GGATG 3 cut(s) 406, 810, 1151
BstH2I RGCGCY 1 cut(s) 1484
BstHHI GCGC 1 cut(s) 1483
BstMAI GTCTC 2 cut(s) 182, 351
BstMWI GCNNNNNNNGC 4 cut(s) 1013, 1154, 1175, 1478
BstNI CCWGG 2 cut(s) 543, 731
BstSCI CCNGG 4 cut(s) 409, 541, 729, 1275
BstV1I GCAGC 6 cut(s) 223, 378, 1019, 1411, 1470, 1486
BstX2I RGATCY 9 cut(s) 24, 54, 658, 686, 756, 825, 1050, 1376, 1515
BstYI RGATCY 9 cut(s) 24, 54, 658, 686, 756, 825, 1050, 1376, 1515
BsuRI GGCC 2 cut(s) 262, 928
BtgI CCRYGG 2 cut(s) 790, 1462
BtgZI GCGATG 1 cut(s) 524
BtsCI GGATG 3 cut(s) 406, 810, 1151
BtsIMutI CAGTG 4 cut(s) 99, 336, 1272, 1287
BveI ACCTGC 1 cut(s) 1333
Cac8I GCNNGC 1 cut(s) 148
CaiI CAGNNNCTG 1 cut(s) 901
CfoI GCGC 1 cut(s) 1483
Cfr10I RCCGGY 5 cut(s) 131, 224, 492, 877, 1246
Cfr13I GGNCC 2 cut(s) 86, 260
Csp6I GTAC 3 cut(s) 273, 975, 1160
CspAI ACCGGT 1 cut(s) 877
CspCI CAANNNNNGTGG 2 cut(s) 934, 969
CviQI GTAC 3 cut(s) 273, 975, 1160
DdeI CTNAG 8 cut(s) 255, 264, 471, 894, 992, 1047, 1443, 1504
DraI TTTAAA 1 cut(s) 1096
EaeI YGGCCR 1 cut(s) 926
Eco24I GRGCYC 1 cut(s) 1133
Eco32I GATATC 1 cut(s) 372
Eco47I GGWCC 1 cut(s) 86
Eco57I CTGAAG 4 cut(s) 329, 960, 1392, 1451
Eco72I CACGTG 1 cut(s) 1208
Eco88I CYCGRG 3 cut(s) 800, 933, 1136
EcoO109I RGGNCCY 1 cut(s) 260
EcoRII CCWGG 2 cut(s) 541, 729
EcoRV GATATC 1 cut(s) 372
EcoT22I ATGCAT 1 cut(s) 219
EcoT38I GRGCYC 1 cut(s) 1133
Esp3I CGTCTC 1 cut(s) 351
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FaqI GGGAC 1 cut(s) 1259
FauI CCCGC 1 cut(s) 862
FbaI TGATCA 1 cut(s) 912
Fnu4HI GCNGC 6 cut(s) 237, 392, 1008, 1425, 1484, 1500
FokI GGATG 3 cut(s) 413, 817, 1138
FriOI GRGCYC 1 cut(s) 1133
Fsp4HI GCNGC 6 cut(s) 237, 392, 1008, 1425, 1484, 1500
FspBI CTAG 1 cut(s) 449
GlaI GCGC 1 cut(s) 1482
GluI GCNGC 6 cut(s) 237, 392, 1008, 1425, 1484, 1500
GsuI CTGGAG 1 cut(s) 923
HaeII RGCGCY 1 cut(s) 1484
HaeIII GGCC 2 cut(s) 262, 928
HapII CCGG 8 cut(s) 132, 225, 411, 493, 878, 1022, 1247, 1277
HhaI GCGC 1 cut(s) 1483
Hin6I GCGC 1 cut(s) 1481
HinP1I GCGC 1 cut(s) 1481
HincII GTYRAC 1 cut(s) 1203
HindII GTYRAC 1 cut(s) 1203
HindIII AAGCTT 1 cut(s) 119
HpaII CCGG 8 cut(s) 132, 225, 411, 493, 878, 1022, 1247, 1277
HphI GGTGA 6 cut(s) 530, 806, 912, 1010, 1314, 1478
Hpy166II GTNNAC 2 cut(s) 875, 1203
Hpy188I TCNGA 9 cut(s) 612, 658, 816, 897, 1109, 1257, 1341, 1431, 1446
Hpy8I GTNNAC 2 cut(s) 875, 1203
HpyAV CCTTC 6 cut(s) 14, 25, 304, 308, 728, 1367
HpyCH4III ACNGT 6 cut(s) 103, 484, 983, 1455, 1463, 1490
HpyCH4IV ACGT 1 cut(s) 1207
HpyF10VI GCNNNNNNNGC 4 cut(s) 1013, 1154, 1175, 1478
HpyF3I CTNAG 8 cut(s) 255, 264, 471, 894, 992, 1047, 1443, 1504
HpySE526I ACGT 1 cut(s) 1207
HspAI GCGC 1 cut(s) 1481
Kpn2I TCCGGA 1 cut(s) 1021
Ksp22I TGATCA 1 cut(s) 912
LmnI GCTCC 3 cut(s) 34, 1013, 1496
Lsp1109I GCAGC 6 cut(s) 223, 378, 1019, 1411, 1470, 1486
LweI GCATC 6 cut(s) 501, 763, 888, 978, 1157, 1459
MaeI CTAG 1 cut(s) 449
MaeII ACGT 1 cut(s) 1207
MaeIII GTNAC 4 cut(s) 860, 883, 1313, 1320
MbiI CCGCTC 1 cut(s) 207
MboII GAAGA 6 cut(s) 79, 530, 551, 599, 820, 835
MflI RGATCY 9 cut(s) 24, 54, 658, 686, 756, 825, 1050, 1376, 1515
MhlI GDGCHC 1 cut(s) 1133
MlyI GAGTC 4 cut(s) 482, 914, 1150, 1328
MnlI CCTC 9 cut(s) 45, 212, 933, 1081, 1173, 1205, 1343, 1442, 1513
Mph1103I ATGCAT 1 cut(s) 219
MroI TCCGGA 1 cut(s) 1021
MroXI GAANNNNTTC 2 cut(s) 591, 827
MseI TTAA 5 cut(s) 666, 744, 1095, 1512, 1527
MslI CAYNNNNRTG 3 cut(s) 623, 896, 1196
MspA1I CMGCKG 1 cut(s) 1157
MspI CCGG 8 cut(s) 132, 225, 411, 493, 878, 1022, 1247, 1277
MspR9I CCNGG 4 cut(s) 411, 543, 731, 1277
Mva1269I GAATGC 1 cut(s) 228
MvaI CCWGG 2 cut(s) 543, 731
MwoI GCNNNNNNNGC 4 cut(s) 1013, 1154, 1175, 1478
NciI CCSGG 2 cut(s) 411, 1277
NlaIV GGNNCC 4 cut(s) 56, 261, 296, 491
NmeAIII GCCGAG 2 cut(s) 485, 904
NmuCI GTSAC 3 cut(s) 883, 1313, 1320
NsiI ATGCAT 1 cut(s) 219
PaeR7I CTCGAG 1 cut(s) 1136
PaqCI CACCTGC 1 cut(s) 1333
PcsI WCGNNNNNNNCGW 1 cut(s) 931
PctI GAATGC 1 cut(s) 228
PdmI GAANNNNTTC 2 cut(s) 591, 827
PfeI GAWTC 7 cut(s) 268, 362, 535, 811, 1067, 1258, 1292
PinAI ACCGGT 1 cut(s) 877
PkrI GCNGC 6 cut(s) 238, 393, 1009, 1426, 1485, 1501
PleI GAGTC 4 cut(s) 481, 913, 1149, 1327
PmaCI CACGTG 1 cut(s) 1208
PmlI CACGTG 1 cut(s) 1208
PpsI GAGTC 4 cut(s) 481, 913, 1149, 1327
Ppu21I YACGTR 1 cut(s) 1208
Psp6I CCWGG 2 cut(s) 541, 729
PspCI CACGTG 1 cut(s) 1208
PspGI CCWGG 2 cut(s) 541, 729
PspN4I GGNNCC 4 cut(s) 56, 261, 296, 491
PspPI GGNCC 2 cut(s) 86, 260
PstNI CAGNNNCTG 1 cut(s) 901
PsuI RGATCY 9 cut(s) 24, 54, 658, 686, 756, 825, 1050, 1376, 1515
RsaI GTAC 3 cut(s) 274, 976, 1161
RsaNI GTAC 3 cut(s) 273, 975, 1160
RseI CAYNNNNRTG 3 cut(s) 623, 896, 1196
SaqAI TTAA 5 cut(s) 666, 744, 1095, 1512, 1527
SatI GCNGC 6 cut(s) 237, 392, 1008, 1425, 1484, 1500
Sau96I GGNCC 2 cut(s) 86, 260
SchI GAGTC 4 cut(s) 482, 914, 1150, 1328
ScrFI CCNGG 4 cut(s) 411, 543, 731, 1277
SduI GDGCHC 1 cut(s) 1133
SfaNI GCATC 6 cut(s) 501, 763, 888, 978, 1157, 1459
Sfr274I CTCGAG 1 cut(s) 1136
SinI GGWCC 1 cut(s) 86
SlaI CTCGAG 1 cut(s) 1136
SmiMI CAYNNNNRTG 3 cut(s) 623, 896, 1196
SmlI CTYRAG 1 cut(s) 1136
SmoI CTYRAG 1 cut(s) 1136
SsiI CCGC 5 cut(s) 205, 673, 869, 996, 1155
SspMI CTAG 1 cut(s) 449
StyD4I CCNGG 4 cut(s) 409, 541, 729, 1275
TaaI ACNGT 6 cut(s) 103, 484, 983, 1455, 1463, 1490
TaiI ACGT 1 cut(s) 1210
TaqI TCGA 4 cut(s) 5, 114, 195, 1137
TfiI GAWTC 7 cut(s) 268, 362, 535, 811, 1067, 1258, 1292
Tru1I TTAA 5 cut(s) 666, 744, 1095, 1512, 1527
Tru9I TTAA 5 cut(s) 666, 744, 1095, 1512, 1527
TscAI CASTG 4 cut(s) 106, 343, 1272, 1294
TseFI GTSAC 3 cut(s) 883, 1313, 1320
TseI GCWGC 6 cut(s) 236, 391, 1007, 1424, 1483, 1499
Tsp45I GTSAC 3 cut(s) 883, 1313, 1320
TspDTI ATGAA 3 cut(s) 152, 189, 769
TspGWI ACGGA 2 cut(s) 635, 1177
TspRI CASTG 4 cut(s) 106, 343, 1272, 1294
VpaK11BI GGWCC 1 cut(s) 86
XcmI CCANNNNNNNNNTGG 1 cut(s) 898
XhoI CTCGAG 1 cut(s) 1136
XmnI GAANNNNTTC 2 cut(s) 591, 827
XspI CTAG 1 cut(s) 449
Zsp2I ATGCAT 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.