Pyruvate kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08570 AT5G08570 AT5G08570 AT5G63680 AT5G63680 AT5G63680 |
| fragaria_vesca | FvH4_4g37360 |
| malus_domestica | MD13G1000500.v1.1 MD16G1005100.v1.1 |
| prunus_persica | Prupe.4G287000_v2.0.a1 |
| pyrus_communis | pycom2749g00020 |
| rosa_chinensis | RchiOBHm_Chr4g0447231 |
| rosa_laevigata | RLG00000005595 |
| rosa_multiflora | Rmu_ssc0000396.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00387590 |
| rosa_rugosa | Rorug04G0379000 |
| rosa_samantha | Rh4AG440400 Rh4BG449400 Rh4CG466400 Rh4DG447900 |
| rosa_wichuraiana | Rw4G037680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 437 |
| AccB1I | GGYRCC | 2 cut(s) | 437, 489 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 476 |
| AccI | GTMKAC | 1 cut(s) | 1112 |
| AccII | CGCG | 1 cut(s) | 925 |
| AccIII | TCCGGA | 1 cut(s) | 1021 |
| AciI | CCGC | 6 cut(s) | 148, 205, 493, 923, 925, 1155 |
| AclWI | GGATC | 7 cut(s) | 42, 223, 461, 564, 661, 1384, 1408 |
| AcoI | YGGCCR | 2 cut(s) | 926, 1233 |
| AcuI | CTGAAG | 2 cut(s) | 960, 1392 |
| AcvI | CACGTG | 1 cut(s) | 1208 |
| AdeI | CACNNNGTG | 1 cut(s) | 1211 |
| AfaI | GTAC | 5 cut(s) | 274, 439, 481, 645, 1241 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 47, 103, 476, 1242, 1267, 1329 |
| AflII | CTTAAG | 1 cut(s) | 308 |
| AflIII | ACRYGT | 1 cut(s) | 1205 |
| AgsI | TTSAA | 4 cut(s) | 305, 406, 821, 905 |
| AjnI | CCWGG | 6 cut(s) | 183, 409, 541, 729, 831, 1416 |
| AleI | CACNNNNGTG | 1 cut(s) | 1409 |
| Alw21I | GWGCWC | 2 cut(s) | 80, 1220 |
| Alw26I | GTCTC | 4 cut(s) | 182, 761, 924, 1313 |
| Alw44I | GTGCAC | 1 cut(s) | 76 |
| AlwI | GGATC | 7 cut(s) | 42, 223, 461, 564, 661, 1384, 1408 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 476 |
| Aor13HI | TCCGGA | 1 cut(s) | 1021 |
| AoxI | GGCC | 6 cut(s) | 85, 260, 926, 1176, 1233, 1244 |
| ApaI | GGGCCC | 1 cut(s) | 89 |
| ApaLI | GTGCAC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 5 cut(s) | 121, 473, 1007, 1308, 1424 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 591 |
| Asp718I | GGTACC | 1 cut(s) | 437 |
| AspLEI | GCGC | 1 cut(s) | 239 |
| AspS9I | GGNCC | 7 cut(s) | 85, 86, 168, 260, 358, 686, 1014 |
| AsuC2I | CCSGG | 2 cut(s) | 97, 1325 |
| AsuHPI | GGTGA | 7 cut(s) | 118, 319, 530, 806, 1010, 1423, 1478 |
| AvaII | GGWCC | 4 cut(s) | 168, 358, 686, 1014 |
| BaeGI | GKGCMC | 3 cut(s) | 80, 89, 612 |
| BalI | TGGCCA | 1 cut(s) | 1235 |
| BanI | GGYRCC | 2 cut(s) | 437, 489 |
| BanII | GRGCYC | 2 cut(s) | 89, 1133 |
| BbrPI | CACGTG | 1 cut(s) | 1208 |
| Bbv12I | GWGCWC | 2 cut(s) | 80, 1220 |
| BbvCI | CCTCAGC | 1 cut(s) | 125 |
| BbvI | GCAGC | 5 cut(s) | 108, 485, 1019, 1295, 1411 |
| BccI | CCATC | 5 cut(s) | 41, 97, 248, 428, 965 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 124, 158 |
| BciT130I | CCWGG | 6 cut(s) | 185, 411, 543, 731, 833, 1418 |
| BciVI | GTATCC | 1 cut(s) | 65 |
| BclI | TGATCA | 1 cut(s) | 912 |
| BcnI | CCSGG | 2 cut(s) | 97, 1325 |
| BcoDI | GTCTC | 4 cut(s) | 182, 761, 924, 1313 |
| BfmI | CTRYAG | 2 cut(s) | 1309, 1345 |
| BfrI | CTTAAG | 1 cut(s) | 308 |
| BfuI | GTATCC | 1 cut(s) | 65 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1175 |
| BglII | AGATCT | 2 cut(s) | 658, 1515 |
| BisI | GCNGC | 7 cut(s) | 122, 474, 493, 926, 1008, 1309, 1425 |
| BlsI | GCNGC | 7 cut(s) | 123, 475, 494, 927, 1009, 1310, 1426 |
| Bme1390I | CCNGG | 8 cut(s) | 97, 185, 411, 543, 731, 833, 1325, 1418 |
| Bme18I | GGWCC | 4 cut(s) | 168, 358, 686, 1014 |
| BmgT120I | GGNCC | 7 cut(s) | 85, 86, 168, 260, 358, 686, 1014 |
| BmiI | GGNNCC | 9 cut(s) | 87, 169, 170, 261, 359, 439, 491, 688, 1015 |
| BmrFI | CCNGG | 8 cut(s) | 97, 185, 411, 543, 731, 833, 1325, 1418 |
| BmrI | ACTGGG | 1 cut(s) | 809 |
| BmsI | GCATC | 4 cut(s) | 888, 1157, 1384, 1459 |
| BmuI | ACTGGG | 1 cut(s) | 809 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1173, 1205 |
| Bpu10I | CCTNAGC | 1 cut(s) | 125 |
| BpuEI | CTTGAG | 1 cut(s) | 1415 |
| BpuMI | CCSGG | 2 cut(s) | 97, 1325 |
| BsaAI | YACGTR | 1 cut(s) | 1208 |
| BsaI | GGTCTC | 2 cut(s) | 182, 1313 |
| BsaJI | CCNNGG | 6 cut(s) | 163, 255, 790, 923, 1323, 1404 |
| BsaWI | WCCGGW | 1 cut(s) | 1021 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1297, 1327 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 47, 103, 476, 1242, 1267, 1329 |
| Bse1I | ACTGG | 3 cut(s) | 280, 815, 1277 |
| Bse3DI | GCAATG | 1 cut(s) | 516 |
| BseAI | TCCGGA | 1 cut(s) | 1021 |
| BseBI | CCWGG | 6 cut(s) | 185, 411, 543, 731, 833, 1418 |
| BseDI | CCNNGG | 6 cut(s) | 163, 255, 790, 923, 1323, 1404 |
| BseGI | GGATG | 2 cut(s) | 89, 1148 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 47, 103, 476, 1242, 1267, 1329 |
| BseMI | GCAATG | 1 cut(s) | 516 |
| BseMII | CTCAG | 3 cut(s) | 116, 255, 908 |
| BseNI | ACTGG | 3 cut(s) | 280, 815, 1277 |
| BseSI | GKGCMC | 3 cut(s) | 80, 89, 612 |
| BseXI | GCAGC | 5 cut(s) | 108, 485, 1019, 1295, 1411 |
| BseYI | CCCAGC | 2 cut(s) | 514, 1010 |
| BsgI | GTGCAG | 2 cut(s) | 450, 1026 |
| Bsh1236I | CGCG | 1 cut(s) | 925 |
| Bsh1285I | CGRYCG | 1 cut(s) | 101 |
| BshFI | GGCC | 6 cut(s) | 87, 262, 928, 1178, 1235, 1246 |
| BshNI | GGYRCC | 2 cut(s) | 437, 489 |
| BsiEI | CGRYCG | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 2 cut(s) | 80, 1220 |
| BsiSI | CCGG | 3 cut(s) | 97, 1022, 1325 |
| BslFI | GGGAC | 3 cut(s) | 181, 371, 1464 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 47, 103, 476, 1242, 1267, 1329 |
| BsmAI | GTCTC | 4 cut(s) | 182, 761, 924, 1313 |
| BsmFI | GGGAC | 3 cut(s) | 181, 371, 1464 |
| BsnI | GGCC | 6 cut(s) | 87, 262, 928, 1178, 1235, 1246 |
| Bso31I | GGTCTC | 2 cut(s) | 182, 1313 |
| Bsp120I | GGGCCC | 1 cut(s) | 85 |
| Bsp1286I | GDGCHC | 5 cut(s) | 80, 89, 612, 1133, 1220 |
| Bsp13I | TCCGGA | 1 cut(s) | 1021 |
| Bsp19I | CCATGG | 1 cut(s) | 163 |
| BspACI | CCGC | 6 cut(s) | 148, 205, 493, 923, 925, 1155 |
| BspANI | GGCC | 6 cut(s) | 87, 262, 928, 1178, 1235, 1246 |
| BspCNI | CTCAG | 3 cut(s) | 117, 256, 907 |
| BspEI | TCCGGA | 1 cut(s) | 1021 |
| BspFNI | CGCG | 1 cut(s) | 925 |
| BspLI | GGNNCC | 9 cut(s) | 87, 169, 170, 261, 359, 439, 491, 688, 1015 |
| BspMAI | CTGCAG | 1 cut(s) | 1313 |
| BspPI | GGATC | 7 cut(s) | 42, 223, 461, 564, 661, 1384, 1408 |
| BspT107I | GGYRCC | 2 cut(s) | 437, 489 |
| BspTI | CTTAAG | 1 cut(s) | 308 |
| BspTNI | GGTCTC | 2 cut(s) | 182, 1313 |
| BsrDI | GCAATG | 1 cut(s) | 516 |
| BsrI | ACTGG | 3 cut(s) | 280, 815, 1277 |
| BssECI | CCNNGG | 6 cut(s) | 163, 255, 790, 923, 1323, 1404 |
| BssT1I | CCWWGG | 2 cut(s) | 163, 255 |
| Bst2UI | CCWGG | 6 cut(s) | 185, 411, 543, 731, 833, 1418 |
| Bst4CI | ACNGT | 3 cut(s) | 454, 484, 1455 |
| BstAFI | CTTAAG | 1 cut(s) | 308 |
| BstBAI | YACGTR | 1 cut(s) | 1208 |
| BstC8I | GCNNGC | 5 cut(s) | 133, 148, 393, 1248, 1460 |
| BstDEI | CTNAG | 4 cut(s) | 125, 264, 894, 992 |
| BstDSI | CCRYGG | 4 cut(s) | 163, 790, 923, 1404 |
| BstF5I | GGATG | 2 cut(s) | 89, 1148 |
| BstFNI | CGCG | 1 cut(s) | 925 |
| BstHHI | GCGC | 1 cut(s) | 239 |
| BstMAI | GTCTC | 4 cut(s) | 182, 761, 924, 1313 |
| BstMCI | CGRYCG | 1 cut(s) | 101 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 84, 1154, 1175, 1394, 1478 |
| BstNI | CCWGG | 6 cut(s) | 185, 411, 543, 731, 833, 1418 |
| BstSCI | CCNGG | 8 cut(s) | 95, 183, 409, 541, 729, 831, 1323, 1416 |
| BstSFI | CTRYAG | 2 cut(s) | 1309, 1345 |
| BstSLI | GKGCMC | 3 cut(s) | 80, 89, 612 |
| BstUI | CGCG | 1 cut(s) | 925 |
| BstV1I | GCAGC | 5 cut(s) | 108, 485, 1019, 1295, 1411 |
| BstX2I | RGATCY | 6 cut(s) | 34, 228, 556, 658, 1376, 1515 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1231 |
| BstYI | RGATCY | 6 cut(s) | 34, 228, 556, 658, 1376, 1515 |
| BsuI | GTATCC | 1 cut(s) | 65 |
| BsuRI | GGCC | 6 cut(s) | 87, 262, 928, 1178, 1235, 1246 |
| BtgI | CCRYGG | 4 cut(s) | 163, 790, 923, 1404 |
| BtsCI | GGATG | 2 cut(s) | 89, 1148 |
| BtsI | GCAGTG | 5 cut(s) | 207, 504, 885, 1318, 1479 |
| BtsIMutI | CAGTG | 8 cut(s) | 207, 450, 504, 566, 885, 975, 1318, 1479 |
| Cac8I | GCNNGC | 5 cut(s) | 133, 148, 393, 1248, 1460 |
| CaiI | CAGNNNCTG | 1 cut(s) | 476 |
| CfoI | GCGC | 1 cut(s) | 239 |
| Cfr13I | GGNCC | 7 cut(s) | 85, 86, 168, 260, 358, 686, 1014 |
| Cfr42I | CCGCGG | 1 cut(s) | 926 |
| Csp6I | GTAC | 5 cut(s) | 273, 438, 480, 644, 1240 |
| CviAII | CATG | 9 cut(s) | 136, 164, 214, 244, 376, 692, 781, 988, 1042 |
| CviQI | GTAC | 5 cut(s) | 273, 438, 480, 644, 1240 |
| DdeI | CTNAG | 4 cut(s) | 125, 264, 894, 992 |
| DraIII | CACNNNGTG | 1 cut(s) | 1211 |
| EaeI | YGGCCR | 2 cut(s) | 926, 1233 |
| Eco130I | CCWWGG | 2 cut(s) | 163, 255 |
| Eco24I | GRGCYC | 2 cut(s) | 89, 1133 |
| Eco31I | GGTCTC | 2 cut(s) | 182, 1313 |
| Eco47I | GGWCC | 4 cut(s) | 168, 358, 686, 1014 |
| Eco57I | CTGAAG | 2 cut(s) | 960, 1392 |
| Eco72I | CACGTG | 1 cut(s) | 1208 |
| EcoO109I | RGGNCCY | 3 cut(s) | 168, 260, 1014 |
| EcoRII | CCWGG | 6 cut(s) | 183, 409, 541, 729, 831, 1416 |
| EcoT14I | CCWWGG | 2 cut(s) | 163, 255 |
| EcoT38I | GRGCYC | 2 cut(s) | 89, 1133 |
| ErhI | CCWWGG | 2 cut(s) | 163, 255 |
| FaeI | CATG | 9 cut(s) | 139, 167, 217, 247, 379, 695, 784, 991, 1045 |
| FaqI | GGGAC | 3 cut(s) | 181, 371, 1464 |
| FatI | CATG | 9 cut(s) | 135, 163, 213, 243, 375, 691, 780, 987, 1041 |
| FauI | CCCGC | 1 cut(s) | 155 |
| FbaI | TGATCA | 1 cut(s) | 912 |
| FblI | GTMKAC | 1 cut(s) | 1112 |
| Fnu4HI | GCNGC | 7 cut(s) | 122, 474, 493, 926, 1008, 1309, 1425 |
| FokI | GGATG | 2 cut(s) | 76, 1135 |
| FriOI | GRGCYC | 2 cut(s) | 89, 1133 |
| Fsp4HI | GCNGC | 7 cut(s) | 122, 474, 493, 926, 1008, 1309, 1425 |
| GlaI | GCGC | 1 cut(s) | 238 |
| GluI | GCNGC | 7 cut(s) | 122, 474, 493, 926, 1008, 1309, 1425 |
| GsaI | CCCAGC | 2 cut(s) | 518, 1014 |
| HaeIII | GGCC | 6 cut(s) | 87, 262, 928, 1178, 1235, 1246 |
| HapII | CCGG | 3 cut(s) | 97, 1022, 1325 |
| HhaI | GCGC | 1 cut(s) | 239 |
| Hin1II | CATG | 9 cut(s) | 139, 167, 217, 247, 379, 695, 784, 991, 1045 |
| Hin6I | GCGC | 1 cut(s) | 237 |
| HinP1I | GCGC | 1 cut(s) | 237 |
| HincII | GTYRAC | 2 cut(s) | 1113, 1203 |
| HindII | GTYRAC | 2 cut(s) | 1113, 1203 |
| HindIII | AAGCTT | 1 cut(s) | 1460 |
| HpaII | CCGG | 3 cut(s) | 97, 1022, 1325 |
| HphI | GGTGA | 7 cut(s) | 118, 319, 530, 806, 1010, 1423, 1478 |
| Hpy166II | GTNNAC | 4 cut(s) | 78, 400, 1113, 1203 |
| Hpy188I | TCNGA | 3 cut(s) | 658, 897, 1163 |
| Hpy188III | TCNNGA | 2 cut(s) | 596, 1022 |
| Hpy8I | GTNNAC | 4 cut(s) | 78, 400, 1113, 1203 |
| Hpy99I | CGWCG | 1 cut(s) | 146 |
| HpyAV | CCTTC | 5 cut(s) | 25, 308, 571, 728, 1367 |
| HpyCH4III | ACNGT | 3 cut(s) | 454, 484, 1455 |
| HpyCH4IV | ACGT | 3 cut(s) | 80, 141, 1207 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 84, 1154, 1175, 1394, 1478 |
| HpyF3I | CTNAG | 4 cut(s) | 125, 264, 894, 992 |
| HpySE526I | ACGT | 3 cut(s) | 80, 141, 1207 |
| Hsp92II | CATG | 9 cut(s) | 139, 167, 217, 247, 379, 695, 784, 991, 1045 |
| HspAI | GCGC | 1 cut(s) | 237 |
| KflI | GGGWCCC | 1 cut(s) | 168 |
| Kpn2I | TCCGGA | 1 cut(s) | 1021 |
| KpnI | GGTACC | 1 cut(s) | 441 |
| Ksp22I | TGATCA | 1 cut(s) | 912 |
| KspI | CCGCGG | 1 cut(s) | 926 |
| LmnI | GCTCC | 2 cut(s) | 1215, 1305 |
| Lsp1109I | GCAGC | 5 cut(s) | 108, 485, 1019, 1295, 1411 |
| LweI | GCATC | 4 cut(s) | 888, 1157, 1384, 1459 |
| MaeII | ACGT | 3 cut(s) | 80, 141, 1207 |
| MaeIII | GTNAC | 1 cut(s) | 883 |
| MboII | GAAGA | 7 cut(s) | 79, 530, 551, 599, 820, 1048, 1062 |
| MfeI | CAATTG | 1 cut(s) | 707 |
| MflI | RGATCY | 6 cut(s) | 34, 228, 556, 658, 1376, 1515 |
| MhlI | GDGCHC | 5 cut(s) | 80, 89, 612, 1133, 1220 |
| MlsI | TGGCCA | 1 cut(s) | 1235 |
| MluCI | AATT | 2 cut(s) | 707, 1226 |
| MluNI | TGGCCA | 1 cut(s) | 1235 |
| MlyI | GAGTC | 3 cut(s) | 1150, 1286, 1506 |
| MmeI | TCCRAC | 2 cut(s) | 93, 1116 |
| Mox20I | TGGCCA | 1 cut(s) | 1235 |
| MroI | TCCGGA | 1 cut(s) | 1021 |
| MroXI | GAANNNNTTC | 1 cut(s) | 591 |
| MscI | TGGCCA | 1 cut(s) | 1235 |
| MseI | TTAA | 6 cut(s) | 153, 309, 351, 666, 1095, 1512 |
| MslI | CAYNNNNRTG | 5 cut(s) | 212, 509, 896, 1196, 1409 |
| Msp20I | TGGCCA | 1 cut(s) | 1235 |
| MspA1I | CMGCKG | 5 cut(s) | 476, 495, 925, 1010, 1157 |
| MspCI | CTTAAG | 1 cut(s) | 308 |
| MspI | CCGG | 3 cut(s) | 97, 1022, 1325 |
| MspR9I | CCNGG | 8 cut(s) | 97, 185, 411, 543, 731, 833, 1325, 1418 |
| MunI | CAATTG | 1 cut(s) | 707 |
| MvaI | CCWGG | 6 cut(s) | 185, 411, 543, 731, 833, 1418 |
| MvnI | CGCG | 1 cut(s) | 925 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 84, 1154, 1175, 1394, 1478 |
| NciI | CCSGG | 2 cut(s) | 97, 1325 |
| NcoI | CCATGG | 1 cut(s) | 163 |
| NlaIII | CATG | 9 cut(s) | 139, 167, 217, 247, 379, 695, 784, 991, 1045 |
| NlaIV | GGNNCC | 9 cut(s) | 87, 169, 170, 261, 359, 439, 491, 688, 1015 |
| NmuCI | GTSAC | 1 cut(s) | 883 |
| OliI | CACNNNNGTG | 1 cut(s) | 1409 |
| PdmI | GAANNNNTTC | 1 cut(s) | 591 |
| PfeI | GAWTC | 7 cut(s) | 268, 279, 773, 905, 1067, 1357, 1400 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 476 |
| PfoI | TCCNGGA | 1 cut(s) | 1416 |
| PkrI | GCNGC | 7 cut(s) | 123, 475, 494, 927, 1009, 1310, 1426 |
| PleI | GAGTC | 3 cut(s) | 1149, 1286, 1505 |
| PmaCI | CACGTG | 1 cut(s) | 1208 |
| PmlI | CACGTG | 1 cut(s) | 1208 |
| PpsI | GAGTC | 3 cut(s) | 1149, 1286, 1505 |
| Ppu21I | YACGTR | 1 cut(s) | 1208 |
| PpuMI | RGGWCCY | 2 cut(s) | 168, 1014 |
| Psp5II | RGGWCCY | 2 cut(s) | 168, 1014 |
| Psp6I | CCWGG | 6 cut(s) | 183, 409, 541, 729, 831, 1416 |
| PspCI | CACGTG | 1 cut(s) | 1208 |
| PspFI | CCCAGC | 2 cut(s) | 514, 1010 |
| PspGI | CCWGG | 6 cut(s) | 183, 409, 541, 729, 831, 1416 |
| PspN4I | GGNNCC | 9 cut(s) | 87, 169, 170, 261, 359, 439, 491, 688, 1015 |
| PspOMI | GGGCCC | 1 cut(s) | 85 |
| PspPI | GGNCC | 7 cut(s) | 85, 86, 168, 260, 358, 686, 1014 |
| PspPPI | RGGWCCY | 2 cut(s) | 168, 1014 |
| PstI | CTGCAG | 1 cut(s) | 1313 |
| PstNI | CAGNNNCTG | 1 cut(s) | 476 |
| PsuI | RGATCY | 6 cut(s) | 34, 228, 556, 658, 1376, 1515 |
| PvuII | CAGCTG | 2 cut(s) | 476, 1010 |
| RsaI | GTAC | 5 cut(s) | 274, 439, 481, 645, 1241 |
| RsaNI | GTAC | 5 cut(s) | 273, 438, 480, 644, 1240 |
| RseI | CAYNNNNRTG | 5 cut(s) | 212, 509, 896, 1196, 1409 |
| SacII | CCGCGG | 1 cut(s) | 926 |
| SalI | GTCGAC | 1 cut(s) | 1111 |
| SaqAI | TTAA | 6 cut(s) | 153, 309, 351, 666, 1095, 1512 |
| SatI | GCNGC | 7 cut(s) | 122, 474, 493, 926, 1008, 1309, 1425 |
| Sau96I | GGNCC | 7 cut(s) | 85, 86, 168, 260, 358, 686, 1014 |
| SchI | GAGTC | 3 cut(s) | 1150, 1286, 1506 |
| ScrFI | CCNGG | 8 cut(s) | 97, 185, 411, 543, 731, 833, 1325, 1418 |
| SduI | GDGCHC | 5 cut(s) | 80, 89, 612, 1133, 1220 |
| SfaNI | GCATC | 4 cut(s) | 888, 1157, 1384, 1459 |
| SfcI | CTRYAG | 2 cut(s) | 1309, 1345 |
| Sfr303I | CCGCGG | 1 cut(s) | 926 |
| SgrBI | CCGCGG | 1 cut(s) | 926 |
| SinI | GGWCC | 4 cut(s) | 168, 358, 686, 1014 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 212, 509, 896, 1196, 1409 |
| SmlI | CTYRAG | 2 cut(s) | 308, 1430 |
| SmoI | CTYRAG | 2 cut(s) | 308, 1430 |
| Sse9I | AATT | 2 cut(s) | 707, 1226 |
| SsiI | CCGC | 6 cut(s) | 148, 205, 493, 923, 925, 1155 |
| StyD4I | CCNGG | 8 cut(s) | 95, 183, 409, 541, 729, 831, 1323, 1416 |
| StyI | CCWWGG | 2 cut(s) | 163, 255 |
| TaaI | ACNGT | 3 cut(s) | 454, 484, 1455 |
| TaiI | ACGT | 3 cut(s) | 83, 144, 1210 |
| TaqI | TCGA | 3 cut(s) | 249, 1048, 1112 |
| TasI | AATT | 2 cut(s) | 707, 1226 |
| TatI | WGTACW | 1 cut(s) | 1239 |
| TauI | GCSGC | 2 cut(s) | 495, 928 |
| TfiI | GAWTC | 7 cut(s) | 268, 279, 773, 905, 1067, 1357, 1400 |
| Tru1I | TTAA | 6 cut(s) | 153, 309, 351, 666, 1095, 1512 |
| Tru9I | TTAA | 6 cut(s) | 153, 309, 351, 666, 1095, 1512 |
| TscAI | CASTG | 8 cut(s) | 214, 457, 511, 573, 892, 982, 1318, 1479 |
| TseFI | GTSAC | 1 cut(s) | 883 |
| TseI | GCWGC | 5 cut(s) | 121, 473, 1007, 1308, 1424 |
| Tsp45I | GTSAC | 1 cut(s) | 883 |
| TspDTI | ATGAA | 6 cut(s) | 44, 152, 627, 765, 769, 1475 |
| TspGWI | ACGGA | 2 cut(s) | 662, 1421 |
| TspRI | CASTG | 8 cut(s) | 214, 457, 511, 573, 892, 982, 1318, 1479 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 476 |
| Vha464I | CTTAAG | 1 cut(s) | 308 |
| VneI | GTGCAC | 1 cut(s) | 76 |
| VpaK11BI | GGWCC | 4 cut(s) | 168, 358, 686, 1014 |
| XmiI | GTMKAC | 1 cut(s) | 1112 |
| XmnI | GAANNNNTTC | 1 cut(s) | 591 |