FvH4_4g37360

Pyruvate kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
33851006 .. 33855051
4046 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g37360.t1

Sequence Viewer

Length: 1425 bp
ATGTTGGAGAAGCTGCTGAGGGCTGGCATGAATGTTGCTCGCTTTAACTTCTCCCATGGCACTCACGACTACCACCAGGAGACCCTCAACAACCTCCGCACTGCCATGCACAACACTCAGATCCTCTGCGCCCTCATGCTCGATACCAAGGGACCTGAGATTCGGACTGGATTCCTCAAGGATGGGAAACCCATTCAACTTAAGGAAGGCCAGGAAATCACCATTACCACTGACTACAACATCAAGGGAGATCCAGAGACCATTTCCATGAGCTACAAAAAGCTGGCCGTGGACTTGAAGCCTGGAAATACCATTTTATGTGCAGATGGCACCATTACCCTCGCTGTCTTGTCTTGTGATCCAGCGGCTGGTATTGTGAGGTGCCGTTGTGAAAACAGTGCAATGCTGGGTGAGAGGAAAAATGTCAATCTTCCTGGTGTTGTGGTTGATCTTCCCACACTGACAGAGAAGGACAGGGAAGATATTCTGGGATGGGGTGTTCCTAACAACATTGATATGATTGCTCTTTCATTTGTACGCAAAGGATCAGATCTAGTTAATGTCCGTAAAGTTCTTGGACCCCATGCCAAGAACATACAGTTGATGTCAAAGGTTGAAAACCAGGAGGGTGTTATCAACTTTGATGAGATACTGCGTGAGACTGACTCATTCATGGTTGCACGAGGTGATCTTGGTATGGAAATCCCAGTTGAGAAAATTTTTCTGGCACAAAAAATGATGATATATAAGTGTAACCTTGTGGGAAAGCCTGTTGTCACGGCCACTCAGATGCTTGAATCCATGATCAAGTCTCCACGACCAACGCGTGCTGAAGCCACAGATGTAGCTAATGCTGTCCTTGATGGCACTGATTGTGTCATGCTTAGTGGTGAGAGTGCAGCTGGGTCCTATCCAGAACTCGCTGTGAAGATCATGGCTCGGATATGTATCGAGGCAGAATCTTCCCTTGACTATGGGGCTATCTTCAAGGAGATGATAAAGTCTACACCACTTCCAATGAGCCCATTGGAGAGTCTTGCATCCTCTGCTGTCCGAACAGCCAACAAGGCAAGGGCCAAACTCATTGTTGTGTTGACACGTGGGGGGAGCACCGCAAAATTGGTGGCCAAGTACAGGCCAGCTGTTCCTATCCTGTCGGTGGTTGTTCCAGTTTTGACCACAGACTCGTTTGATTGGGACTGCAGTGATGAGACTCCAGCAAGACATAGCCTGATATACAGGGGTTTGATTCCTCTATTGGCTGAAGGATCTGCGAAGGCCACCGATTCTGAATCCACTGAGGTGATCCTGGATGCTGCTCTAAAGTCGGCAACAAAAAGGAGACTGTGCCAGCCTGGTGATGCTGTGGTGGCACTTCATCGTATCGGAGTTGCATCTGTCATCAAGATCTGCATAGTGAAGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

475

Amino Acids

51.46

Weight (kDa)

7.51

Isoelectric Point (pI)

33.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK PF00224 1 - 309 9.8e-142 Pyruvate kinase, barrel domain
PK_C PF02887 344 - 464 5.8e-22 Pyruvate kinase, alpha/beta domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0009829)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 329, 381
AccB7I CCANNNNNTGG 1 cut(s) 368
AccI GTMKAC 1 cut(s) 1004
AccII CGCG 1 cut(s) 826
AciI CCGC 3 cut(s) 97, 365, 1113
AclWI GGATC 6 cut(s) 115, 245, 353, 553, 1276, 1300
AcoI YGGCCR 3 cut(s) 285, 780, 1125
AcsI RAATTY 1 cut(s) 717
AcuI CTGAAG 2 cut(s) 852, 1284
AcvI CACGTG 1 cut(s) 1100
AdeI CACNNNGTG 1 cut(s) 686
AfaI GTAC 2 cut(s) 537, 1133
AfiI CCNNNNNNNGG 3 cut(s) 368, 1134, 1159
AflII CTTAAG 1 cut(s) 200
AflIII ACRYGT 2 cut(s) 824, 1097
AgsI TTSAA 5 cut(s) 197, 298, 617, 797, 988
AjnI CCWGG 7 cut(s) 75, 210, 301, 433, 621, 1308, 1354
AleI CACNNNNGTG 1 cut(s) 1301
AloI GAACNNNNNNTCC 2 cut(s) 483, 515
AluBI AGCT 6 cut(s) 13, 273, 283, 848, 902, 1142
AluI AGCT 6 cut(s) 13, 273, 283, 848, 902, 1142
Alw21I GWGCWC 1 cut(s) 1112
Alw26I GTCTC 6 cut(s) 74, 251, 653, 816, 1205, 1336
AlwI GGATC 6 cut(s) 115, 245, 353, 553, 1276, 1300
AlwNI CAGNNNCTG 1 cut(s) 368
AoxI GGCC 7 cut(s) 208, 285, 780, 1074, 1125, 1136, 1278
ApeKI GCWGC 3 cut(s) 13, 899, 1316
ApoI RAATTY 1 cut(s) 717
ArsI GACNNNNNNTTYG 2 cut(s) 144, 176
Asp700I GAANNNNTTC 1 cut(s) 483
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 4 cut(s) 152, 578, 906, 1074
AsuHPI GGTGA 6 cut(s) 211, 422, 698, 902, 1315, 1370
AvaII GGWCC 3 cut(s) 152, 578, 906
BalI TGGCCA 1 cut(s) 1127
BanI GGYRCC 2 cut(s) 329, 381
BanII GRGCYC 1 cut(s) 1025
BauI CACGAG 1 cut(s) 681
BbrPI CACGTG 1 cut(s) 1100
Bbv12I GWGCWC 1 cut(s) 1112
BbvCI CCTCAGC 1 cut(s) 17
BbvI GCAGC 2 cut(s) 911, 1303
BccI CCATC 4 cut(s) 176, 320, 486, 857
BceAI ACGGC 3 cut(s) 272, 369, 795
BciT130I CCWGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
BclI TGATCA 1 cut(s) 804
BcoDI GTCTC 6 cut(s) 74, 251, 653, 816, 1205, 1336
BfaI CTAG 1 cut(s) 554
BfmI CTRYAG 1 cut(s) 1201
BfrI CTTAAG 1 cut(s) 200
BglI GCCNNNNNGGC 1 cut(s) 1067
BglII AGATCT 2 cut(s) 550, 1407
BisI GCNGC 4 cut(s) 14, 366, 900, 1317
BlsI GCNGC 4 cut(s) 15, 367, 901, 1318
Bme1390I CCNGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
Bme18I GGWCC 3 cut(s) 152, 578, 906
BmgT120I GGNCC 4 cut(s) 152, 578, 906, 1074
BmiI GGNNCC 5 cut(s) 153, 331, 383, 580, 907
BmrFI CCNGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
BmrI ACTGGG 1 cut(s) 701
BmsI GCATC 5 cut(s) 780, 1049, 1303, 1351, 1403
BmuI ACTGGG 1 cut(s) 701
BplI GAGNNNNNCTC 2 cut(s) 650, 682
BpmI CTGGAG 1 cut(s) 1200
Bpu10I CCTNAGC 1 cut(s) 17
BpuEI CTTGAG 1 cut(s) 161
BsaAI YACGTR 1 cut(s) 1100
BsaBI GATNNNNATC 1 cut(s) 947
BsaI GGTCTC 2 cut(s) 74, 251
BsaJI CCNNGG 3 cut(s) 55, 147, 288
Bsc4I CCNNNNNNNGG 3 cut(s) 368, 1134, 1159
Bse1I ACTGG 3 cut(s) 172, 707, 1169
Bse3DI GCAATG 1 cut(s) 408
Bse8I GATNNNNATC 1 cut(s) 947
BseBI CCWGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
BseDI CCNNGG 3 cut(s) 55, 147, 288
BseGI GGATG 4 cut(s) 187, 497, 1040, 1318
BseJI GATNNNNATC 1 cut(s) 947
BseLI CCNNNNNNNGG 3 cut(s) 368, 1134, 1159
BseMI GCAATG 1 cut(s) 408
BseMII CTCAG 5 cut(s) 8, 131, 147, 800, 1290
BseNI ACTGG 3 cut(s) 172, 707, 1169
BseXI GCAGC 2 cut(s) 911, 1303
BseYI CCCAGC 2 cut(s) 406, 902
BsgI GTGCAG 2 cut(s) 342, 918
Bsh1236I CGCG 1 cut(s) 826
BshFI GGCC 7 cut(s) 210, 287, 782, 1076, 1127, 1138, 1280
BshNI GGYRCC 2 cut(s) 329, 381
BsiHKAI GWGCWC 1 cut(s) 1112
BslFI GGGAC 2 cut(s) 165, 1211
BslI CCNNNNNNNGG 3 cut(s) 368, 1134, 1159
BsmAI GTCTC 6 cut(s) 74, 251, 653, 816, 1205, 1336
BsmFI GGGAC 2 cut(s) 165, 1211
BsnI GGCC 7 cut(s) 210, 287, 782, 1076, 1127, 1138, 1280
Bso31I GGTCTC 2 cut(s) 74, 251
Bsp1286I GDGCHC 2 cut(s) 1025, 1112
Bsp19I CCATGG 1 cut(s) 55
BspACI CCGC 3 cut(s) 97, 365, 1113
BspANI GGCC 7 cut(s) 210, 287, 782, 1076, 1127, 1138, 1280
BspCNI CTCAG 5 cut(s) 9, 130, 148, 799, 1291
BspFNI CGCG 1 cut(s) 826
BspLI GGNNCC 5 cut(s) 153, 331, 383, 580, 907
BspMAI CTGCAG 1 cut(s) 1205
BspPI GGATC 6 cut(s) 115, 245, 353, 553, 1276, 1300
BspT107I GGYRCC 2 cut(s) 329, 381
BspTI CTTAAG 1 cut(s) 200
BspTNI GGTCTC 2 cut(s) 74, 251
BsrDI GCAATG 1 cut(s) 408
BsrI ACTGG 3 cut(s) 172, 707, 1169
BssECI CCNNGG 3 cut(s) 55, 147, 288
BssSI CACGAG 1 cut(s) 681
BssT1I CCWWGG 2 cut(s) 55, 147
Bst2BI CACGAG 1 cut(s) 681
Bst2UI CCWGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
Bst4CI ACNGT 3 cut(s) 398, 600, 1347
BstAFI CTTAAG 1 cut(s) 200
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstBAI YACGTR 1 cut(s) 1100
BstC8I GCNNGC 6 cut(s) 25, 40, 285, 828, 1140, 1352
BstDEI CTNAG 6 cut(s) 17, 117, 156, 786, 884, 1299
BstDSI CCRYGG 2 cut(s) 55, 288
BstF5I GGATG 4 cut(s) 187, 497, 1040, 1318
BstFNI CGCG 1 cut(s) 826
BstHHI GCGC 1 cut(s) 131
BstMAI GTCTC 6 cut(s) 74, 251, 653, 816, 1205, 1336
BstMWI GCNNNNNNNGC 3 cut(s) 1046, 1067, 1370
BstNI CCWGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
BstSCI CCNGG 7 cut(s) 75, 210, 301, 433, 621, 1308, 1354
BstSFI CTRYAG 1 cut(s) 1201
BstUI CGCG 1 cut(s) 826
BstV1I GCAGC 2 cut(s) 911, 1303
BstX2I RGATCY 5 cut(s) 120, 250, 550, 1268, 1407
BstYI RGATCY 5 cut(s) 120, 250, 550, 1268, 1407
BsuRI GGCC 7 cut(s) 210, 287, 782, 1076, 1127, 1138, 1280
BtgI CCRYGG 2 cut(s) 55, 288
BtsCI GGATG 4 cut(s) 187, 497, 1040, 1318
BtsI GCAGTG 2 cut(s) 99, 1210
BtsIMutI CAGTG 7 cut(s) 99, 228, 403, 458, 867, 1210, 1296
Cac8I GCNNGC 6 cut(s) 25, 40, 285, 828, 1140, 1352
CaiI CAGNNNCTG 1 cut(s) 368
CfoI GCGC 1 cut(s) 131
Cfr13I GGNCC 4 cut(s) 152, 578, 906, 1074
Csp6I GTAC 2 cut(s) 536, 1132
CspCI CAANNNNNGTGG 2 cut(s) 1104, 1139
CviQI GTAC 2 cut(s) 536, 1132
DdeI CTNAG 6 cut(s) 17, 117, 156, 786, 884, 1299
DraIII CACNNNGTG 1 cut(s) 686
EaeI YGGCCR 3 cut(s) 285, 780, 1125
Eco130I CCWWGG 2 cut(s) 55, 147
Eco24I GRGCYC 1 cut(s) 1025
Eco31I GGTCTC 2 cut(s) 74, 251
Eco47I GGWCC 3 cut(s) 152, 578, 906
Eco57I CTGAAG 2 cut(s) 852, 1284
Eco72I CACGTG 1 cut(s) 1100
EcoO109I RGGNCCY 2 cut(s) 152, 906
EcoRII CCWGG 7 cut(s) 75, 210, 301, 433, 621, 1308, 1354
EcoT14I CCWWGG 2 cut(s) 55, 147
EcoT38I GRGCYC 1 cut(s) 1025
ErhI CCWWGG 2 cut(s) 55, 147
FaqI GGGAC 2 cut(s) 165, 1211
FbaI TGATCA 1 cut(s) 804
FblI GTMKAC 1 cut(s) 1004
Fnu4HI GCNGC 4 cut(s) 14, 366, 900, 1317
FokI GGATG 4 cut(s) 194, 504, 1027, 1325
FriOI GRGCYC 1 cut(s) 1025
Fsp4HI GCNGC 4 cut(s) 14, 366, 900, 1317
FspBI CTAG 1 cut(s) 554
GlaI GCGC 1 cut(s) 130
GluI GCNGC 4 cut(s) 14, 366, 900, 1317
GsaI CCCAGC 2 cut(s) 410, 906
GsuI CTGGAG 1 cut(s) 1200
HaeIII GGCC 7 cut(s) 210, 287, 782, 1076, 1127, 1138, 1280
HhaI GCGC 1 cut(s) 131
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HincII GTYRAC 1 cut(s) 1095
HindII GTYRAC 1 cut(s) 1095
HphI GGTGA 6 cut(s) 211, 422, 698, 902, 1315, 1370
Hpy166II GTNNAC 3 cut(s) 292, 1005, 1095
Hpy188I TCNGA 8 cut(s) 120, 165, 550, 789, 942, 1055, 1291, 1388
Hpy188III TCNNGA 4 cut(s) 65, 254, 914, 1405
Hpy8I GTNNAC 3 cut(s) 292, 1005, 1095
HpyAV CCTTC 4 cut(s) 200, 463, 1259, 1270
HpyCH4III ACNGT 3 cut(s) 398, 600, 1347
HpyCH4IV ACGT 1 cut(s) 1099
HpyCH4V TGCA 9 cut(s) 109, 323, 401, 680, 899, 1040, 1203, 1394, 1413
HpyF10VI GCNNNNNNNGC 3 cut(s) 1046, 1067, 1370
HpyF3I CTNAG 6 cut(s) 17, 117, 156, 786, 884, 1299
HpySE526I ACGT 1 cut(s) 1099
HspAI GCGC 1 cut(s) 129
Ksp22I TGATCA 1 cut(s) 804
LmnI GCTCC 1 cut(s) 1107
Lsp1109I GCAGC 2 cut(s) 911, 1303
LweI GCATC 5 cut(s) 780, 1049, 1303, 1351, 1403
MaeI CTAG 1 cut(s) 554
MaeII ACGT 1 cut(s) 1099
MaeIII GTNAC 2 cut(s) 752, 775
MboII GAAGA 6 cut(s) 422, 443, 491, 940, 954, 976
MflI RGATCY 5 cut(s) 120, 250, 550, 1268, 1407
MhlI GDGCHC 2 cut(s) 1025, 1112
MlsI TGGCCA 1 cut(s) 1127
MluCI AATT 2 cut(s) 717, 1118
MluI ACGCGT 1 cut(s) 824
MluNI TGGCCA 1 cut(s) 1127
MlyI GAGTC 4 cut(s) 659, 1042, 1178, 1207
Mox20I TGGCCA 1 cut(s) 1127
MroXI GAANNNNTTC 1 cut(s) 483
MscI TGGCCA 1 cut(s) 1127
MseI TTAA 3 cut(s) 45, 201, 558
MslI CAYNNNNRTG 6 cut(s) 104, 266, 515, 788, 1088, 1301
Msp20I TGGCCA 1 cut(s) 1127
MspA1I CMGCKG 3 cut(s) 365, 902, 1142
MspCI CTTAAG 1 cut(s) 200
MspR9I CCNGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
MvaI CCWGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
MvnI CGCG 1 cut(s) 826
MwoI GCNNNNNNNGC 3 cut(s) 1046, 1067, 1370
NcoI CCATGG 1 cut(s) 55
NlaIV GGNNCC 5 cut(s) 153, 331, 383, 580, 907
NmuCI GTSAC 1 cut(s) 775
OliI CACNNNNGTG 1 cut(s) 1301
PcsI WCGNNNNNNNCGW 1 cut(s) 823
PdmI GAANNNNTTC 1 cut(s) 483
PfeI GAWTC 7 cut(s) 160, 171, 797, 959, 1249, 1286, 1292
PflMI CCANNNNNTGG 1 cut(s) 368
PfoI TCCNGGA 1 cut(s) 1308
PkrI GCNGC 4 cut(s) 15, 367, 901, 1318
PleI GAGTC 4 cut(s) 659, 1041, 1178, 1207
PmaCI CACGTG 1 cut(s) 1100
PmlI CACGTG 1 cut(s) 1100
PpsI GAGTC 4 cut(s) 659, 1041, 1178, 1207
Ppu21I YACGTR 1 cut(s) 1100
PpuMI RGGWCCY 2 cut(s) 152, 906
Psp5II RGGWCCY 2 cut(s) 152, 906
Psp6I CCWGG 7 cut(s) 75, 210, 301, 433, 621, 1308, 1354
PspCI CACGTG 1 cut(s) 1100
PspFI CCCAGC 2 cut(s) 406, 902
PspGI CCWGG 7 cut(s) 75, 210, 301, 433, 621, 1308, 1354
PspN4I GGNNCC 5 cut(s) 153, 331, 383, 580, 907
PspPI GGNCC 4 cut(s) 152, 578, 906, 1074
PspPPI RGGWCCY 2 cut(s) 152, 906
PstI CTGCAG 1 cut(s) 1205
PstNI CAGNNNCTG 1 cut(s) 368
PsuI RGATCY 5 cut(s) 120, 250, 550, 1268, 1407
PvuII CAGCTG 2 cut(s) 902, 1142
RsaI GTAC 2 cut(s) 537, 1133
RsaNI GTAC 2 cut(s) 536, 1132
RseI CAYNNNNRTG 6 cut(s) 104, 266, 515, 788, 1088, 1301
SaqAI TTAA 3 cut(s) 45, 201, 558
SatI GCNGC 4 cut(s) 14, 366, 900, 1317
Sau96I GGNCC 4 cut(s) 152, 578, 906, 1074
SchI GAGTC 4 cut(s) 659, 1042, 1178, 1207
ScrFI CCNGG 7 cut(s) 77, 212, 303, 435, 623, 1310, 1356
SduI GDGCHC 2 cut(s) 1025, 1112
SfaNI GCATC 5 cut(s) 780, 1049, 1303, 1351, 1403
SfcI CTRYAG 1 cut(s) 1201
SinI GGWCC 3 cut(s) 152, 578, 906
SmiMI CAYNNNNRTG 6 cut(s) 104, 266, 515, 788, 1088, 1301
SmlI CTYRAG 2 cut(s) 176, 200
SmoI CTYRAG 2 cut(s) 176, 200
Sse9I AATT 2 cut(s) 717, 1118
SsiI CCGC 3 cut(s) 97, 365, 1113
SspMI CTAG 1 cut(s) 554
StyD4I CCNGG 7 cut(s) 75, 210, 301, 433, 621, 1308, 1354
StyI CCWWGG 2 cut(s) 55, 147
TaaI ACNGT 3 cut(s) 398, 600, 1347
TaiI ACGT 1 cut(s) 1102
TaqI TCGA 2 cut(s) 141, 951
TasI AATT 2 cut(s) 717, 1118
TatI WGTACW 1 cut(s) 1131
TauI GCSGC 1 cut(s) 368
TfiI GAWTC 7 cut(s) 160, 171, 797, 959, 1249, 1286, 1292
Tru1I TTAA 3 cut(s) 45, 201, 558
Tru9I TTAA 3 cut(s) 45, 201, 558
TscAI CASTG 7 cut(s) 106, 235, 403, 465, 874, 1210, 1303
TseFI GTSAC 1 cut(s) 775
TseI GCWGC 3 cut(s) 13, 899, 1316
Tsp45I GTSAC 1 cut(s) 775
TspDTI ATGAA 4 cut(s) 44, 519, 661, 1367
TspGWI ACGGA 1 cut(s) 554
TspRI CASTG 7 cut(s) 106, 235, 403, 465, 874, 1210, 1303
Van91I CCANNNNNTGG 1 cut(s) 368
Vha464I CTTAAG 1 cut(s) 200
VpaK11BI GGWCC 3 cut(s) 152, 578, 906
XapI RAATTY 1 cut(s) 717
XmiI GTMKAC 1 cut(s) 1004
XmnI GAANNNNTTC 1 cut(s) 483
XspI CTAG 1 cut(s) 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.