Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008476

Physical Location & Seq

Genomic Coordinates Reverse (-)

2890102 .. 2892094

Gene Structure 1993 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G09320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGGAGAACACAGACGTCGTCTCGGGTCTGCATAATTTCTTGAGTAAACCCTCCGCCAAAGATTTCATCAAATCAATCAAAAGTTTCATTGTTTCGATCTTGAACACTGCACCAGACCCTGAAAAAGATTGTGATGCAGTTCAGGACTTCTTTTACAAGATGGAGTCTGCTTTCAGGGCTCATCCACTTTGGTCTGGTTGTTCCGATGATGAGTTAGACAATGCGGGAGATGGCCTGGAGAAGTATGTCATGACAAAGTTATTTCCCCGGGTTTTTGCATCAAACACCGAGGATGTTATATCCGATGAGAAACTCTTTCAGAAGATTTCCTTGGTTCAACAGTTCATATCTCCTGAAAACTTGGATATACAACCAACTTTTCAAAACCAAACATCTTGGCTTCTAGCTCAAAAAGAGCTCCAGAAGATAAATATGTACAATGCTCCTCGTGATAAGCTTATGTGTATCCTTAGGTGCTGCAAAGTCATTAATAACTTACTTCTAAATGCTTCAATTGCTTCAAACCAGAATGAACCTGGAGCTGACCAATTTCTTCCTGTTCTCATATATGTTACCATTAAGGCTAACCCTCCCCAGTTTCACTCAAACTTGTTGTATATACAAAGATATAGGCGTCAATCTAAACTGGTTGGCGAAGCTGGCTACTTATTCACCAACATACTCTCTGCAGAGTCATTCATCTCAAATATTGATGCAAAATCCCTCTCCATGGATGAAGCTGACTTTGAAACTAAAATGAAATCTGCACATGCACGTCTTTCTGGTCCGGGAAGCCAGTCTTATCAAACGGATCACGGTGCTGCATTACCCACTGCTCATAATACTAAGAGGGAAAACATGCTTCTGCATACAAAATCAACTGATAGTTTCTCTGGTACCAATGAAACACTGAGTGAAACACCAATAAAGAAAGCTGACCCCATTACCGATTTGGAAAATAAGGGCGCTGCTACGCTTTTGAATGATAGAAGTGAGGCAACCAAAATATTTCAAGAATATCCTTACATGTTTGCCAGTGTTGGTGATTTAAAGATAGGAGATGTTGAAGACTTGCTTAATAATTATAAACAGCTAGTTTTCAAATATGTTTGCCTTTCCAAAGGCTTGGGTGATGCAACATCTTTAACTCCATGCATTTCACCATTGCAAGCGTCTAAAGTCTCTGAGAATCATACAACATTGTCTTCAGATTTTCAAACGAAAAGCGAAACTGACAGGAGCGTTGATAATTTGTTTCGAGCTCTACAAGGTGAGGGAGACAATGTTCATAATATCTCAGATGTAAAACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007049 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016020 GO:0016043 GO:0017016 GO:0017048 GO:0019899 GO:0022402 GO:0022414 GO:0022607 GO:0022622 GO:0031267 GO:0032501 GO:0032502 GO:0032506 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048364 GO:0048528 GO:0048608 GO:0048731 GO:0048856 GO:0051020 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0065009 GO:0071554 GO:0071840 GO:0090696 GO:0098772 GO:0099402 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VPS9

Protein Analysis

437

Amino Acids

48.78

Weight (kDa)

5.31

Isoelectric Point (pI)

33.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF5601	PF18151	24 - 88	1.6e-14	Domain of unknown function (DUF5601)
VPS9	PF02204	134 - 238	5.5e-31	Vacuolar sorting protein 9 (VPS9) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19770 AT3G19770 AT5G09320
fragaria_vesca	FvH4_5g38820 FvH4_5g38820
malus_domestica	MD00G1104300.v1.1 MD15G1358700.v1.1
prunus_persica	Prupe.1G506400_v2.0.a1 Prupe.1G506400_v2.0.a1
pyrus_communis	pycom08g14820 pycom15g32120
rosa_chinensis	RchiOBHm_Chr7g0240821
rosa_laevigata	RLG00000000622
rosa_multiflora	Rmu_sc0004821.1_g000014 Rmu_sc0010888.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219600
rosa_rugosa	Rorug07G0339300 Rorug07G0339300
rosa_samantha	Rh7AG493500 Rh7BG465500 Rh7CG512000 Rh7DG478700
rosa_wichuraiana	Rw7G041760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1086
AatII	GACGTC	1 cut(s)	18
Acc65I	GGTACC	1 cut(s)	896
AccB1I	GGYRCC	1 cut(s)	896
AciI	CCGC	2 cut(s)	54, 224
AclWI	GGATC	1 cut(s)	819
AcuI	CTGAAG	1 cut(s)	1191
AcyI	GRCGYC	2 cut(s)	15, 634
AdeI	CACNNNGTG	1 cut(s)	914
AfaI	GTAC	2 cut(s)	437, 898
AfiI	CCNNNNNNNGG	1 cut(s)	730
AflIII	ACRYGT	1 cut(s)	1026
AjiI	CACGTC	1 cut(s)	776
AjnI	CCWGG	2 cut(s)	234, 535
AjuI	GAANNNNNNNTTGG	2 cut(s)	314, 346
AloI	GAACNNNNNNTCC	2 cut(s)	1269, 1301
AluBI	AGCT	9 cut(s)	407, 418, 457, 542, 659, 740, 935, 1093, 1262
AluI	AGCT	9 cut(s)	407, 418, 457, 542, 659, 740, 935, 1093, 1262
Alw21I	GWGCWC	2 cut(s)	420, 1264
Alw26I	GTCTC	3 cut(s)	25, 1186, 1272
AlwI	GGATC	1 cut(s)	819
AlwNI	CAGNNNCTG	1 cut(s)	119
Ama87I	CYCGRG	2 cut(s)	22, 267
AoxI	GGCC	1 cut(s)	232
ApeKI	GCWGC	3 cut(s)	477, 821, 968
AseI	ATTAAT	1 cut(s)	489
Asp718I	GGTACC	1 cut(s)	896
AspLEI	GCGC	1 cut(s)	968
AspS9I	GGNCC	1 cut(s)	785
AsuC2I	CCSGG	3 cut(s)	268, 269, 789
AsuHPI	GGTGA	5 cut(s)	664, 1055, 1142, 1152, 1283
AvaI	CYCGRG	2 cut(s)	22, 267
AvaII	GGWCC	1 cut(s)	785
AxyI	CCTNAGG	1 cut(s)	470
BanI	GGYRCC	1 cut(s)	896
BanII	GRGCYC	3 cut(s)	181, 420, 1264
BauI	CACGAG	1 cut(s)	447
BbsI	GAAGAC	2 cut(s)	1074, 1197
Bbv12I	GWGCWC	2 cut(s)	420, 1264
BbvI	GCAGC	3 cut(s)	464, 808, 955
BccI	CCATC	2 cut(s)	154, 224
BciT130I	CCWGG	2 cut(s)	236, 537
BciVI	GTATCC	1 cut(s)	476
BcnI	CCSGG	3 cut(s)	268, 269, 789
BcoDI	GTCTC	3 cut(s)	25, 1186, 1272
BfaI	CTAG	2 cut(s)	404, 1094
BfmI	CTRYAG	1 cut(s)	687
BfoI	RGCGCY	1 cut(s)	969
BfuI	GTATCC	1 cut(s)	476
BisI	GCNGC	3 cut(s)	478, 822, 969
BlsI	GCNGC	3 cut(s)	479, 823, 970
Bme1390I	CCNGG	5 cut(s)	236, 268, 269, 537, 789
Bme18I	GGWCC	1 cut(s)	785
BmeT110I	CYCGRG	2 cut(s)	22, 267
BmgBI	CACGTC	1 cut(s)	776
BmgT120I	GGNCC	1 cut(s)	785
BmiI	GGNNCC	1 cut(s)	898
BmrFI	CCNGG	5 cut(s)	236, 268, 269, 537, 789
BmrI	ACTGGG	1 cut(s)	589
BmsI	GCATC	4 cut(s)	124, 287, 703, 1123
BmuI	ACTGGG	1 cut(s)	589
BpiI	GAAGAC	2 cut(s)	1074, 1197
BpmI	CTGGAG	3 cut(s)	257, 404, 558
BpuEI	CTTGAG	1 cut(s)	61
BpuMI	CCSGG	3 cut(s)	268, 269, 789
BsaHI	GRCGYC	2 cut(s)	15, 634
BsaJI	CCNNGG	5 cut(s)	266, 267, 288, 330, 729
BsaXI	ACNNNNNCTCC	2 cut(s)	1269, 1299
Bsc4I	CCNNNNNNNGG	1 cut(s)	730
Bse1I	ACTGG	4 cut(s)	595, 651, 796, 1035
Bse21I	CCTNAGG	1 cut(s)	470
Bse3DI	GCAATG	1 cut(s)	1163
BseBI	CCWGG	2 cut(s)	236, 537
BseDI	CCNNGG	5 cut(s)	266, 267, 288, 330, 729
BseGI	GGATG	3 cut(s)	181, 298, 739
BseLI	CCNNNNNNNGG	1 cut(s)	730
BseMI	GCAATG	1 cut(s)	1163
BseMII	CTCAG	3 cut(s)	902, 1176, 1311
BseNI	ACTGG	4 cut(s)	595, 651, 796, 1035
BseRI	GAGGAG	1 cut(s)	435
BseXI	GCAGC	3 cut(s)	464, 808, 955
BsgI	GTGCAG	2 cut(s)	93, 750
BshFI	GGCC	1 cut(s)	234
BshNI	GGYRCC	1 cut(s)	896
BsiHKAI	GWGCWC	2 cut(s)	420, 1264
BsiHKCI	CYCGRG	2 cut(s)	22, 267
BsiSI	CCGG	2 cut(s)	268, 788
BslI	CCNNNNNNNGG	1 cut(s)	730
BsmAI	GTCTC	3 cut(s)	25, 1186, 1272
BsmBI	CGTCTC	1 cut(s)	25
BsnI	GGCC	1 cut(s)	234
BsoBI	CYCGRG	2 cut(s)	22, 267
Bsp1286I	GDGCHC	3 cut(s)	181, 420, 1264
Bsp1407I	TGTACA	1 cut(s)	435
Bsp143I	GATC	2 cut(s)	96, 811
Bsp19I	CCATGG	1 cut(s)	729
BspACI	CCGC	2 cut(s)	54, 224
BspANI	GGCC	1 cut(s)	234
BspCNI	CTCAG	3 cut(s)	903, 1177, 1310
BspHI	TCATGA	1 cut(s)	249
BspLI	GGNNCC	1 cut(s)	898
BspMAI	CTGCAG	1 cut(s)	691
BspPI	GGATC	1 cut(s)	819
BspT107I	GGYRCC	1 cut(s)	896
BsrDI	GCAATG	1 cut(s)	1163
BsrGI	TGTACA	1 cut(s)	435
BsrI	ACTGG	4 cut(s)	595, 651, 796, 1035
BssECI	CCNNGG	5 cut(s)	266, 267, 288, 330, 729
BssMI	GATC	2 cut(s)	96, 811
BssNI	GRCGYC	2 cut(s)	15, 634
BssSI	CACGAG	1 cut(s)	447
BssT1I	CCWWGG	2 cut(s)	330, 729
Bst2BI	CACGAG	1 cut(s)	447
Bst2UI	CCWGG	2 cut(s)	236, 537
Bst4CI	ACNGT	2 cut(s)	342, 818
BstACI	GRCGYC	2 cut(s)	15, 634
BstAUI	TGTACA	1 cut(s)	435
BstC8I	GCNNGC	2 cut(s)	661, 1170
BstDEI	CTNAG	5 cut(s)	470, 846, 911, 1185, 1297
BstDSI	CCRYGG	1 cut(s)	729
BstF5I	GGATG	3 cut(s)	181, 298, 739
BstH2I	RGCGCY	1 cut(s)	969
BstHHI	GCGC	1 cut(s)	968
BstKTI	GATC	2 cut(s)	99, 814
BstMAI	GTCTC	3 cut(s)	25, 1186, 1272
BstMBI	GATC	2 cut(s)	96, 811
BstMWI	GCNNNNNNNGC	3 cut(s)	176, 515, 660
BstNI	CCWGG	2 cut(s)	236, 537
BstNSI	RCATGY	3 cut(s)	773, 862, 1030
BstSCI	CCNGG	5 cut(s)	234, 266, 267, 535, 787
BstSFI	CTRYAG	1 cut(s)	687
BstV1I	GCAGC	3 cut(s)	464, 808, 955
BstV2I	GAAGAC	2 cut(s)	1074, 1197
BstXI	CCANNNNNNTGG	1 cut(s)	1126
Bsu36I	CCTNAGG	1 cut(s)	470
BsuI	GTATCC	1 cut(s)	476
BsuRI	GGCC	1 cut(s)	234
BtgI	CCRYGG	1 cut(s)	729
BtrI	CACGTC	1 cut(s)	776
BtsCI	GGATG	3 cut(s)	181, 298, 739
BtsI	GCAGTG	2 cut(s)	105, 831
BtsIMutI	CAGTG	4 cut(s)	105, 831, 908, 1042
Cac8I	GCNNGC	2 cut(s)	661, 1170
CaiI	CAGNNNCTG	1 cut(s)	119
CciI	TCATGA	1 cut(s)	249
CfoI	GCGC	1 cut(s)	968
Cfr13I	GGNCC	1 cut(s)	785
Cfr9I	CCCGGG	1 cut(s)	267
CseI	GACGC	2 cut(s)	623, 1161
Csp6I	GTAC	2 cut(s)	436, 897
CviAII	CATG	6 cut(s)	250, 730, 770, 859, 1027, 1152
CviQI	GTAC	2 cut(s)	436, 897
DdeI	CTNAG	5 cut(s)	470, 846, 911, 1185, 1297
DpnI	GATC	2 cut(s)	98, 813
DpnII	GATC	2 cut(s)	96, 811
DraI	TTTAAA	1 cut(s)	1050
DraIII	CACNNNGTG	1 cut(s)	914
EciI	GGCGGA	1 cut(s)	43
Ecl136II	GAGCTC	2 cut(s)	418, 1262
Eco130I	CCWWGG	2 cut(s)	330, 729
Eco24I	GRGCYC	3 cut(s)	181, 420, 1264
Eco47I	GGWCC	1 cut(s)	785
Eco53kI	GAGCTC	2 cut(s)	418, 1262
Eco57I	CTGAAG	1 cut(s)	1191
Eco81I	CCTNAGG	1 cut(s)	470
Eco88I	CYCGRG	2 cut(s)	22, 267
EcoICRI	GAGCTC	2 cut(s)	418, 1262
EcoRII	CCWGG	2 cut(s)	234, 535
EcoT14I	CCWWGG	2 cut(s)	330, 729
EcoT22I	ATGCAT	1 cut(s)	1157
EcoT38I	GRGCYC	3 cut(s)	181, 420, 1264
ErhI	CCWWGG	2 cut(s)	330, 729
Esp3I	CGTCTC	1 cut(s)	25
FaeI	CATG	6 cut(s)	253, 733, 773, 862, 1030, 1155
FalI	AAGNNNNNCTT	6 cut(s)	314, 346, 784, 816, 1059, 1091
FatI	CATG	6 cut(s)	249, 729, 769, 858, 1026, 1151
FauI	CCCGC	1 cut(s)	217
Fnu4HI	GCNGC	3 cut(s)	478, 822, 969
FokI	GGATG	3 cut(s)	168, 305, 746
FriOI	GRGCYC	3 cut(s)	181, 420, 1264
Fsp4HI	GCNGC	3 cut(s)	478, 822, 969
FspBI	CTAG	2 cut(s)	404, 1094
GlaI	GCGC	1 cut(s)	967
GluI	GCNGC	3 cut(s)	478, 822, 969
GsuI	CTGGAG	3 cut(s)	257, 404, 558
HaeII	RGCGCY	1 cut(s)	969
HaeIII	GGCC	1 cut(s)	234
HapII	CCGG	2 cut(s)	268, 788
HgaI	GACGC	2 cut(s)	623, 1161
HhaI	GCGC	1 cut(s)	968
Hin1I	GRCGYC	2 cut(s)	15, 634
Hin1II	CATG	6 cut(s)	253, 733, 773, 862, 1030, 1155
Hin6I	GCGC	1 cut(s)	966
HinP1I	GCGC	1 cut(s)	966
HindIII	AAGCTT	1 cut(s)	455
HinfI	GANTC	3 cut(s)	164, 692, 1189
HpaII	CCGG	2 cut(s)	268, 788
HphI	GGTGA	5 cut(s)	664, 1055, 1142, 1152, 1283
Hpy166II	GTNNAC	1 cut(s)	47
Hpy188I	TCNGA	6 cut(s)	205, 304, 321, 1186, 1210, 1300
Hpy188III	TCNNGA	8 cut(s)	40, 100, 143, 250, 353, 421, 449, 1013
Hpy8I	GTNNAC	1 cut(s)	47
Hpy99I	CGWCG	1 cut(s)	20
HpyCH4III	ACNGT	2 cut(s)	342, 818
HpyCH4IV	ACGT	2 cut(s)	15, 775
HpyF10VI	GCNNNNNNNGC	3 cut(s)	176, 515, 660
HpyF3I	CTNAG	5 cut(s)	470, 846, 911, 1185, 1297
HpySE526I	ACGT	2 cut(s)	15, 775
Hsp92I	GRCGYC	2 cut(s)	15, 634
Hsp92II	CATG	6 cut(s)	253, 733, 773, 862, 1030, 1155
HspAI	GCGC	1 cut(s)	966
KpnI	GGTACC	1 cut(s)	900
Kzo9I	GATC	2 cut(s)	96, 811
LmnI	GCTCC	4 cut(s)	423, 448, 539, 1239
Lsp1109I	GCAGC	3 cut(s)	464, 808, 955
LweI	GCATC	4 cut(s)	124, 287, 703, 1123
MaeI	CTAG	2 cut(s)	404, 1094
MaeII	ACGT	2 cut(s)	15, 775
MaeIII	GTNAC	1 cut(s)	571
MalI	GATC	2 cut(s)	98, 813
MboI	GATC	2 cut(s)	96, 811
MboII	GAAGA	5 cut(s)	334, 436, 545, 1079, 1197
MfeI	CAATTG	1 cut(s)	513
MhlI	GDGCHC	3 cut(s)	181, 420, 1264
MluCI	AATT	5 cut(s)	34, 513, 548, 1081, 1249
MlyI	GAGTC	2 cut(s)	173, 701
MnlI	CCTC	8 cut(s)	61, 283, 456, 600, 734, 843, 988, 1267
Mph1103I	ATGCAT	1 cut(s)	1157
MseI	TTAA	5 cut(s)	489, 579, 1049, 1077, 1145
MspI	CCGG	2 cut(s)	268, 788
MspR9I	CCNGG	5 cut(s)	236, 268, 269, 537, 789
MunI	CAATTG	1 cut(s)	513
MvaI	CCWGG	2 cut(s)	236, 537
MwoI	GCNNNNNNNGC	3 cut(s)	176, 515, 660
NciI	CCSGG	3 cut(s)	268, 269, 789
NcoI	CCATGG	1 cut(s)	729
NdeII	GATC	2 cut(s)	96, 811
NlaIII	CATG	6 cut(s)	253, 733, 773, 862, 1030, 1155
NlaIV	GGNNCC	1 cut(s)	898
NsiI	ATGCAT	1 cut(s)	1157
NspI	RCATGY	3 cut(s)	773, 862, 1030
PagI	TCATGA	1 cut(s)	249
PciI	ACATGT	1 cut(s)	1026
PfeI	GAWTC	1 cut(s)	1189
PflFI	GACNNNGTC	1 cut(s)	17
PfoI	TCCNGGA	1 cut(s)	787
PkrI	GCNGC	3 cut(s)	479, 823, 970
PleI	GAGTC	2 cut(s)	172, 700
PpsI	GAGTC	2 cut(s)	172, 700
PscI	ACATGT	1 cut(s)	1026
PshBI	ATTAAT	1 cut(s)	489
PsiI	TTATAA	1 cut(s)	1086
Psp124BI	GAGCTC	2 cut(s)	420, 1264
Psp6I	CCWGG	2 cut(s)	234, 535
PspGI	CCWGG	2 cut(s)	234, 535
PspN4I	GGNNCC	1 cut(s)	898
PspPI	GGNCC	1 cut(s)	785
PstI	CTGCAG	1 cut(s)	691
PstNI	CAGNNNCTG	1 cut(s)	119
PsyI	GACNNNGTC	1 cut(s)	17
RsaI	GTAC	2 cut(s)	437, 898
RsaNI	GTAC	2 cut(s)	436, 897
SacI	GAGCTC	2 cut(s)	420, 1264
SaqAI	TTAA	5 cut(s)	489, 579, 1049, 1077, 1145
SatI	GCNGC	3 cut(s)	478, 822, 969
Sau3AI	GATC	2 cut(s)	96, 811
Sau96I	GGNCC	1 cut(s)	785
SchI	GAGTC	2 cut(s)	173, 701
ScrFI	CCNGG	5 cut(s)	236, 268, 269, 537, 789
SduI	GDGCHC	3 cut(s)	181, 420, 1264
SfaNI	GCATC	4 cut(s)	124, 287, 703, 1123
SfcI	CTRYAG	1 cut(s)	687
SinI	GGWCC	1 cut(s)	785
SmaI	CCCGGG	1 cut(s)	269
SmlI	CTYRAG	1 cut(s)	40
SmoI	CTYRAG	1 cut(s)	40
Sse9I	AATT	5 cut(s)	34, 513, 548, 1081, 1249
SsiI	CCGC	2 cut(s)	54, 224
SspI	AATATT	2 cut(s)	709, 1008
SspMI	CTAG	2 cut(s)	404, 1094
SstI	GAGCTC	2 cut(s)	420, 1264
StyD4I	CCNGG	5 cut(s)	234, 266, 267, 535, 787
StyI	CCWWGG	2 cut(s)	330, 729
TaaI	ACNGT	2 cut(s)	342, 818
TaiI	ACGT	2 cut(s)	18, 778
TaqI	TCGA	2 cut(s)	95, 1258
TasI	AATT	5 cut(s)	34, 513, 548, 1081, 1249
TatI	WGTACW	1 cut(s)	435
TfiI	GAWTC	1 cut(s)	1189
Tru1I	TTAA	5 cut(s)	489, 579, 1049, 1077, 1145
Tru9I	TTAA	5 cut(s)	489, 579, 1049, 1077, 1145
TscAI	CASTG	4 cut(s)	112, 838, 915, 1042
TseI	GCWGC	3 cut(s)	477, 821, 968
TspDTI	ATGAA	9 cut(s)	55, 76, 334, 546, 688, 750, 773, 918, 1277
TspGWI	ACGGA	1 cut(s)	824
TspMI	CCCGGG	1 cut(s)	267
TspRI	CASTG	4 cut(s)	112, 838, 915, 1042
Tth111I	GACNNNGTC	1 cut(s)	17
VpaK11BI	GGWCC	1 cut(s)	785
VspI	ATTAAT	1 cut(s)	489
XceI	RCATGY	3 cut(s)	773, 862, 1030
XcmI	CCANNNNNNNNNTGG	2 cut(s)	533, 949
XmaI	CCCGGG	1 cut(s)	267
XspI	CTAG	2 cut(s)	404, 1094
ZraI	GACGTC	1 cut(s)	16
Zsp2I	ATGCAT	1 cut(s)	1157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.