Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0008476

Physical Location & Seq

Genomic Coordinates Forward (+)

55111571 .. 55114598

Gene Structure 3028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG465500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGTTCTCTTTGTCATCTATCAGAATATCACATAGATTTTACACACACAACTTCATCATCGGCTCTCTCGCCTCTGCCCACCTAATCGCCGCCGTCGACCTGAGATTTTGGACCAGTCCGACGGTGATGGAGAACGCCGACGTCTTCACCGGGCTGCACGAATTTCTCGAACGCATGCGTCAACCGTCGGCCAGCGACTTCGTCAAGTCTATCAAAAGTTTCATTGTGTCGTTTTCGAACAATTCTCCTGATCCAGAGAGGGACAGTGCTGCGGTGCAGAACTTCTTTGCGCAAATGGAAGTGGATTTTAGGGTTCATCCACTTTGGGCTGGTTGTTCTGAAGAGGAGCTCGATAGTGCTGGCGAGGGACTGGAGAAGTATGTCATGACAAAGTTATTTACTCGTGTATTTGCTTCACTTCCAGATGATGTAAAACTTGACAACATACTACATGAGAAGATGGCTTTGGTTCAACAATTCATTCGACCAGAAAATTTGGATATTAAGGCCCCCTTTCAAAATGAAACATCATGGCTGCTTGCACAGAAAGAACTGCAAAAGATCAATATGTACAAGGCACCAAGGGACAAGCTTGTGTGTATCCTCAATTGTTGCAAGGTTATCAATAACTTGCTGCTCAATGCTTCTATTGCTTCAAATGAGAATCCTCCTGGAGCTGATGAATTTCTTCCTGTCTTAATTTATGTTACTTTGAAGGCAAACCCTCCGCAACTGCACTCAAATTTGTTGTATATACAAAGATACAGGCGACAATCTCGATTAGTAGCAGAAGCAGCCTATTTCTTCACTAACATGCTCTCTGTCGAATCCTTCATTTCAAATATCGATGCGAAAGCCCTGTCAATGGATGAAACTGAGTTTGAAAAGAACATGGAATCTGCTCGAGCAATTCTATCAGGACTCTCAACTGATTTGAACAGCCAGCCTAATCAAAGCGGCCAACCTGTGAATATAAACAAGGAGCCAACAGCACCGCCCAAATCGTCAAAAGTTCCATCACTTTCAGATTTGGAGGATAAGGGTGCAGCACTCCTTGTAAACGATAAGCAGGCAAGCCAGGTTTTCCGGCAGTATCCATACTTGTTTGCGCATGTTGGTGATCTAACAGTCAATGATGTAGAAGACCTTCTTAATAATTACAAACAGCTTGTTTTCAAGTATGTTTGTCTCTCCAAAGGATTAGGTGATTCTGCTCCATCTCTGAACTCTTCTCTTCCTCTAAAGAGTTCAGAAACACAGGATCACCAGCATGCTGAAACTGCAAAGCAACAGGACCATACTAGAGCTGCAGAGCCTAATGATGAGCCATCAAAGGATACTGATAGAAAGGATGATGGTTCAAATACAGATTCTCTTTTTGAAGTGGAAAGTTTAGAATCTAAATTGTCAGAGGATCAAACAGTAGCACCACAAGACAGTAAACATGAAGAGTCCTCTCAATCACAGCTCTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007049 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016020 GO:0016043 GO:0017016 GO:0017048 GO:0019899 GO:0022402 GO:0022414 GO:0022607 GO:0022622 GO:0031267 GO:0032501 GO:0032502 GO:0032506 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048364 GO:0048528 GO:0048608 GO:0048731 GO:0048856 GO:0051020 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0065009 GO:0071554 GO:0071840 GO:0090696 GO:0098772 GO:0099402 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VPS9

Protein Analysis

491

Amino Acids

55.05

Weight (kDa)

5.04

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF5601	PF18151	69 - 133	1.7e-14	Domain of unknown function (DUF5601)
VPS9	PF02204	179 - 283	6.9e-30	Vacuolar sorting protein 9 (VPS9) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19770 AT3G19770 AT5G09320
fragaria_vesca	FvH4_5g38820 FvH4_5g38820
malus_domestica	MD00G1104300.v1.1 MD15G1358700.v1.1
prunus_persica	Prupe.1G506400_v2.0.a1 Prupe.1G506400_v2.0.a1
pyrus_communis	pycom08g14820 pycom15g32120
rosa_chinensis	RchiOBHm_Chr7g0240821
rosa_laevigata	RLG00000000622
rosa_multiflora	Rmu_sc0004821.1_g000014 Rmu_sc0010888.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219600
rosa_rugosa	Rorug07G0339300 Rorug07G0339300
rosa_samantha	Rh7AG493500 Rh7BG465500 Rh7CG512000 Rh7DG478700
rosa_wichuraiana	Rw7G041760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	144
Acc16I	TGCGCA	2 cut(s)	291, 1110
AccB1I	GGYRCC	1 cut(s)	577
AccI	GTMKAC	1 cut(s)	96
AciI	CCGC	5 cut(s)	90, 272, 728, 957, 995
AclWI	GGATC	3 cut(s)	245, 1269, 1422
AcoI	YGGCCR	2 cut(s)	189, 958
AcsI	RAATTY	4 cut(s)	161, 493, 683, 742
AcuI	CTGAAG	1 cut(s)	360
AcyI	GRCGYC	1 cut(s)	141
AfaI	GTAC	1 cut(s)	572
AfiI	CCNNNNNNNGG	1 cut(s)	865
AjnI	CCWGG	2 cut(s)	670, 1077
AjuI	GAANNNNNNNTTGG	2 cut(s)	449, 481
AluBI	AGCT	6 cut(s)	349, 592, 677, 1168, 1307, 1468
AluI	AGCT	6 cut(s)	349, 592, 677, 1168, 1307, 1468
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	1 cut(s)	1193
AlwI	GGATC	3 cut(s)	245, 1269, 1422
Ama87I	CYCGRG	1 cut(s)	903
AoxI	GGCC	3 cut(s)	189, 507, 958
ApeKI	GCWGC	7 cut(s)	154, 269, 535, 634, 794, 1046, 1307
ApoI	RAATTY	4 cut(s)	161, 493, 683, 742
ArsI	GACNNNNNNTTYG	2 cut(s)	845, 877
Asp700I	GAANNNNTTC	2 cut(s)	687, 1146
AspLEI	GCGC	2 cut(s)	292, 1111
AspS9I	GGNCC	3 cut(s)	111, 508, 1294
AsuC2I	CCSGG	1 cut(s)	151
AsuHPI	GGTGA	5 cut(s)	136, 139, 1130, 1217, 1256
AsuII	TTCGAA	1 cut(s)	236
AvaI	CYCGRG	1 cut(s)	903
AvaII	GGWCC	2 cut(s)	111, 1294
BanI	GGYRCC	1 cut(s)	577
BanII	GRGCYC	1 cut(s)	351
BarI	GAAGNNNNNNTAC	2 cut(s)	1131, 1163
BauI	CACGAG	1 cut(s)	402
BbsI	GAAGAC	2 cut(s)	136, 1149
Bbv12I	GWGCWC	1 cut(s)	351
BbvI	GCAGC	7 cut(s)	141, 256, 522, 621, 806, 1058, 1294
BccI	CCATC	6 cut(s)	121, 454, 1024, 1225, 1336, 1349
BceAI	ACGGC	1 cut(s)	77
BciT130I	CCWGG	2 cut(s)	672, 1079
BciVI	GTATCC	3 cut(s)	611, 1104, 1330
BcnI	CCSGG	1 cut(s)	151
BcoDI	GTCTC	1 cut(s)	1193
BfaI	CTAG	2 cut(s)	1302, 1474
BfmI	CTRYAG	1 cut(s)	1308
BfuI	GTATCC	3 cut(s)	611, 1104, 1330
BisI	GCNGC	9 cut(s)	90, 155, 270, 536, 635, 795, 958, 1047, 1308
BlsI	GCNGC	9 cut(s)	91, 156, 271, 537, 636, 796, 959, 1048, 1309
Bme1390I	CCNGG	3 cut(s)	151, 672, 1079
Bme18I	GGWCC	2 cut(s)	111, 1294
BmeT110I	CYCGRG	1 cut(s)	903
BmgT120I	GGNCC	3 cut(s)	111, 508, 1294
BmiI	GGNNCC	3 cut(s)	510, 579, 984
BmrFI	CCNGG	3 cut(s)	151, 672, 1079
BmsI	GCATC	1 cut(s)	838
BpiI	GAAGAC	2 cut(s)	136, 1149
BpmI	CTGGAG	2 cut(s)	392, 693
Bpu14I	TTCGAA	1 cut(s)	236
BpuMI	CCSGG	1 cut(s)	151
Bsa29I	ATCGAT	1 cut(s)	846
BsaHI	GRCGYC	1 cut(s)	141
BsaJI	CCNNGG	1 cut(s)	581
Bsc4I	CCNNNNNNNGG	1 cut(s)	865
Bse1I	ACTGG	2 cut(s)	114, 375
BseBI	CCWGG	2 cut(s)	672, 1079
BseCI	ATCGAT	1 cut(s)	846
BseDI	CCNNGG	1 cut(s)	581
BseGI	GGATG	3 cut(s)	316, 874, 1357
BseLI	CCNNNNNNNGG	1 cut(s)	865
BseMII	CTCAG	2 cut(s)	92, 867
BseNI	ACTGG	2 cut(s)	114, 375
BseRI	GAGGAG	1 cut(s)	359
BseXI	GCAGC	7 cut(s)	141, 256, 522, 621, 806, 1058, 1294
BsgI	GTGCAG	4 cut(s)	140, 296, 719, 1065
BshFI	GGCC	3 cut(s)	191, 509, 960
BshNI	GGYRCC	1 cut(s)	577
BshVI	ATCGAT	1 cut(s)	846
BsiHKAI	GWGCWC	1 cut(s)	351
BsiHKCI	CYCGRG	1 cut(s)	903
BsiSI	CCGG	2 cut(s)	150, 1087
BslFI	GGGAC	3 cut(s)	275, 381, 599
BslI	CCNNNNNNNGG	1 cut(s)	865
BsmAI	GTCTC	1 cut(s)	1193
BsmFI	GGGAC	3 cut(s)	275, 381, 599
BsnI	GGCC	3 cut(s)	191, 509, 960
BsoBI	CYCGRG	1 cut(s)	903
Bsp119I	TTCGAA	1 cut(s)	236
Bsp1286I	GDGCHC	1 cut(s)	351
Bsp1407I	TGTACA	1 cut(s)	570
Bsp143I	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
BspACI	CCGC	5 cut(s)	90, 272, 728, 957, 995
BspANI	GGCC	3 cut(s)	191, 509, 960
BspCNI	CTCAG	2 cut(s)	93, 868
BspDI	ATCGAT	1 cut(s)	846
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	3 cut(s)	510, 579, 984
BspMAI	CTGCAG	1 cut(s)	1312
BspPI	GGATC	3 cut(s)	245, 1269, 1422
BspT104I	TTCGAA	1 cut(s)	236
BspT107I	GGYRCC	1 cut(s)	577
BsrGI	TGTACA	1 cut(s)	570
BsrI	ACTGG	2 cut(s)	114, 375
BssECI	CCNNGG	1 cut(s)	581
BssMI	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
BssNI	GRCGYC	1 cut(s)	141
BssSI	CACGAG	1 cut(s)	402
BssT1I	CCWWGG	1 cut(s)	581
Bst2BI	CACGAG	1 cut(s)	402
Bst2UI	CCWGG	2 cut(s)	672, 1079
Bst4CI	ACNGT	6 cut(s)	124, 186, 266, 1129, 1423, 1439
Bst6I	CTCTTC	4 cut(s)	336, 1234, 1239, 1443
BstACI	GRCGYC	1 cut(s)	141
BstAUI	TGTACA	1 cut(s)	570
BstBI	TTCGAA	1 cut(s)	236
BstC8I	GCNNGC	8 cut(s)	176, 193, 361, 540, 944, 1071, 1075, 1272
BstDEI	CTNAG	2 cut(s)	101, 876
BstF5I	GGATG	3 cut(s)	316, 874, 1357
BstHHI	GCGC	2 cut(s)	292, 1111
BstKTI	GATC	5 cut(s)	253, 564, 1123, 1264, 1417
BstMAI	GTCTC	1 cut(s)	1193
BstMBI	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
BstMWI	GCNNNNNNNGC	3 cut(s)	650, 794, 1280
BstNI	CCWGG	2 cut(s)	672, 1079
BstNSI	RCATGY	4 cut(s)	178, 817, 1115, 1274
BstSCI	CCNGG	3 cut(s)	149, 670, 1077
BstSFI	CTRYAG	1 cut(s)	1308
BstV1I	GCAGC	7 cut(s)	141, 256, 522, 621, 806, 1058, 1294
BstV2I	GAAGAC	2 cut(s)	136, 1149
Bsu15I	ATCGAT	1 cut(s)	846
BsuI	GTATCC	3 cut(s)	611, 1104, 1330
BsuRI	GGCC	3 cut(s)	191, 509, 960
BsuTUI	ATCGAT	1 cut(s)	846
BtsCI	GGATG	3 cut(s)	316, 874, 1357
BtsIMutI	CAGTG	1 cut(s)	271
Cac8I	GCNNGC	8 cut(s)	176, 193, 361, 540, 944, 1071, 1075, 1272
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	2 cut(s)	292, 1111
Cfr13I	GGNCC	3 cut(s)	111, 508, 1294
ClaI	ATCGAT	1 cut(s)	846
CseI	GACGC	1 cut(s)	167
Csp6I	GTAC	1 cut(s)	571
CviAII	CATG	9 cut(s)	175, 385, 452, 531, 814, 892, 1112, 1271, 1445
CviQI	GTAC	1 cut(s)	571
DdeI	CTNAG	2 cut(s)	101, 876
DpnI	GATC	5 cut(s)	252, 563, 1122, 1263, 1416
DpnII	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
EaeI	YGGCCR	2 cut(s)	189, 958
Eam1104I	CTCTTC	4 cut(s)	336, 1234, 1239, 1443
EarI	CTCTTC	4 cut(s)	336, 1234, 1239, 1443
Ecl136II	GAGCTC	1 cut(s)	349
Eco130I	CCWWGG	1 cut(s)	581
Eco24I	GRGCYC	1 cut(s)	351
Eco47I	GGWCC	2 cut(s)	111, 1294
Eco53kI	GAGCTC	1 cut(s)	349
Eco57I	CTGAAG	1 cut(s)	360
Eco88I	CYCGRG	1 cut(s)	903
EcoICRI	GAGCTC	1 cut(s)	349
EcoO109I	RGGNCCY	1 cut(s)	508
EcoRII	CCWGG	2 cut(s)	670, 1077
EcoT14I	CCWWGG	1 cut(s)	581
EcoT38I	GRGCYC	1 cut(s)	351
ErhI	CCWWGG	1 cut(s)	581
FaeI	CATG	9 cut(s)	178, 388, 455, 534, 817, 895, 1115, 1274, 1448
FalI	AAGNNNNNCTT	4 cut(s)	497, 529, 1134, 1166
FaqI	GGGAC	3 cut(s)	275, 381, 599
FatI	CATG	9 cut(s)	174, 384, 451, 530, 813, 891, 1111, 1270, 1444
FblI	GTMKAC	1 cut(s)	96
Fnu4HI	GCNGC	9 cut(s)	90, 155, 270, 536, 635, 795, 958, 1047, 1308
FokI	GGATG	3 cut(s)	303, 881, 1364
FriOI	GRGCYC	1 cut(s)	351
Fsp4HI	GCNGC	9 cut(s)	90, 155, 270, 536, 635, 795, 958, 1047, 1308
FspBI	CTAG	2 cut(s)	1302, 1474
FspI	TGCGCA	2 cut(s)	291, 1110
GlaI	GCGC	2 cut(s)	291, 1110
GluI	GCNGC	9 cut(s)	90, 155, 270, 536, 635, 795, 958, 1047, 1308
GsuI	CTGGAG	2 cut(s)	392, 693
HaeIII	GGCC	3 cut(s)	191, 509, 960
HapII	CCGG	2 cut(s)	150, 1087
HgaI	GACGC	1 cut(s)	167
HhaI	GCGC	2 cut(s)	292, 1111
Hin1I	GRCGYC	1 cut(s)	141
Hin1II	CATG	9 cut(s)	178, 388, 455, 534, 817, 895, 1115, 1274, 1448
Hin6I	GCGC	2 cut(s)	290, 1109
HinP1I	GCGC	2 cut(s)	290, 1109
HincII	GTYRAC	2 cut(s)	97, 182
HindII	GTYRAC	2 cut(s)	97, 182
HindIII	AAGCTT	1 cut(s)	590
HinfI	GANTC	8 cut(s)	664, 827, 896, 921, 1208, 1370, 1397, 1451
HpaII	CCGG	2 cut(s)	150, 1087
HphI	GGTGA	5 cut(s)	136, 139, 1130, 1217, 1256
Hpy166II	GTNNAC	4 cut(s)	97, 182, 1060, 1442
Hpy188I	TCNGA	7 cut(s)	23, 120, 340, 1027, 1224, 1252, 1411
Hpy188III	TCNNGA	7 cut(s)	167, 248, 254, 385, 422, 777, 918
Hpy8I	GTNNAC	4 cut(s)	97, 182, 1060, 1442
Hpy99I	CGWCG	4 cut(s)	98, 124, 143, 190
HpyAV	CCTTC	3 cut(s)	709, 841, 1157
HpyCH4III	ACNGT	6 cut(s)	124, 186, 266, 1129, 1423, 1439
HpyCH4IV	ACGT	1 cut(s)	141
HpyCH4V	TGCA	9 cut(s)	157, 277, 542, 556, 615, 736, 1046, 1283, 1310
HpyF10VI	GCNNNNNNNGC	3 cut(s)	650, 794, 1280
HpyF3I	CTNAG	2 cut(s)	101, 876
HpySE526I	ACGT	1 cut(s)	141
Hsp92I	GRCGYC	1 cut(s)	141
Hsp92II	CATG	9 cut(s)	178, 388, 455, 534, 817, 895, 1115, 1274, 1448
HspAI	GCGC	2 cut(s)	290, 1109
Kzo9I	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
LmnI	GCTCC	4 cut(s)	346, 674, 982, 1219
Lsp1109I	GCAGC	7 cut(s)	141, 256, 522, 621, 806, 1058, 1294
LweI	GCATC	1 cut(s)	838
MaeI	CTAG	2 cut(s)	1302, 1474
MaeII	ACGT	1 cut(s)	141
MaeIII	GTNAC	1 cut(s)	706
MalI	GATC	5 cut(s)	252, 563, 1122, 1263, 1416
MboI	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
MboII	GAAGA	9 cut(s)	136, 353, 469, 680, 796, 1154, 1221, 1226, 1460
MfeI	CAATTG	1 cut(s)	607
MhlI	GDGCHC	1 cut(s)	351
MlyI	GAGTC	2 cut(s)	915, 1460
MmeI	TCCRAC	1 cut(s)	143
MroXI	GAANNNNTTC	2 cut(s)	687, 1146
MseI	TTAA	3 cut(s)	504, 698, 1152
MslI	CAYNNNNRTG	3 cut(s)	812, 1116, 1269
MspI	CCGG	2 cut(s)	150, 1087
MspR9I	CCNGG	3 cut(s)	151, 672, 1079
MunI	CAATTG	1 cut(s)	607
MvaI	CCWGG	2 cut(s)	672, 1079
MwoI	GCNNNNNNNGC	3 cut(s)	650, 794, 1280
NciI	CCSGG	1 cut(s)	151
NdeII	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
NlaIII	CATG	9 cut(s)	178, 388, 455, 534, 817, 895, 1115, 1274, 1448
NlaIV	GGNNCC	3 cut(s)	510, 579, 984
NsbI	TGCGCA	2 cut(s)	291, 1110
NspI	RCATGY	4 cut(s)	178, 817, 1115, 1274
NspV	TTCGAA	1 cut(s)	236
PaeI	GCATGC	2 cut(s)	178, 1274
PaeR7I	CTCGAG	1 cut(s)	903
PagI	TCATGA	1 cut(s)	384
PcsI	WCGNNNNNNNCGW	2 cut(s)	93, 165
PdmI	GAANNNNTTC	2 cut(s)	687, 1146
PfeI	GAWTC	6 cut(s)	664, 827, 896, 1208, 1370, 1397
PflFI	GACNNNGTC	1 cut(s)	200
PfoI	TCCNGGA	1 cut(s)	670
PkrI	GCNGC	9 cut(s)	91, 156, 271, 537, 636, 796, 959, 1048, 1309
PleI	GAGTC	2 cut(s)	915, 1459
PpsI	GAGTC	2 cut(s)	915, 1459
Psp124BI	GAGCTC	1 cut(s)	351
Psp6I	CCWGG	2 cut(s)	670, 1077
PspGI	CCWGG	2 cut(s)	670, 1077
PspN4I	GGNNCC	3 cut(s)	510, 579, 984
PspPI	GGNCC	3 cut(s)	111, 508, 1294
PspXI	VCTCGAGB	1 cut(s)	903
PstI	CTGCAG	1 cut(s)	1312
PsyI	GACNNNGTC	1 cut(s)	200
RsaI	GTAC	1 cut(s)	572
RsaNI	GTAC	1 cut(s)	571
RseI	CAYNNNNRTG	3 cut(s)	812, 1116, 1269
SacI	GAGCTC	1 cut(s)	351
SalI	GTCGAC	1 cut(s)	95
SaqAI	TTAA	3 cut(s)	504, 698, 1152
SatI	GCNGC	9 cut(s)	90, 155, 270, 536, 635, 795, 958, 1047, 1308
Sau3AI	GATC	5 cut(s)	250, 561, 1120, 1261, 1414
Sau96I	GGNCC	3 cut(s)	111, 508, 1294
SchI	GAGTC	2 cut(s)	915, 1460
ScrFI	CCNGG	3 cut(s)	151, 672, 1079
SduI	GDGCHC	1 cut(s)	351
SfaNI	GCATC	1 cut(s)	838
SfcI	CTRYAG	1 cut(s)	1308
Sfr274I	CTCGAG	1 cut(s)	903
SfuI	TTCGAA	1 cut(s)	236
SinI	GGWCC	2 cut(s)	111, 1294
SlaI	CTCGAG	1 cut(s)	903
SmiMI	CAYNNNNRTG	3 cut(s)	812, 1116, 1269
SmlI	CTYRAG	1 cut(s)	903
SmoI	CTYRAG	1 cut(s)	903
SphI	GCATGC	2 cut(s)	178, 1274
SsiI	CCGC	5 cut(s)	90, 272, 728, 957, 995
SspMI	CTAG	2 cut(s)	1302, 1474
SstI	GAGCTC	1 cut(s)	351
StyD4I	CCNGG	3 cut(s)	149, 670, 1077
StyI	CCWWGG	1 cut(s)	581
TaaI	ACNGT	6 cut(s)	124, 186, 266, 1129, 1423, 1439
TaiI	ACGT	1 cut(s)	144
TaqI	TCGA	9 cut(s)	96, 168, 236, 351, 484, 778, 825, 846, 904
TatI	WGTACW	1 cut(s)	570
TauI	GCSGC	2 cut(s)	92, 960
TfiI	GAWTC	6 cut(s)	664, 827, 896, 1208, 1370, 1397
Tru1I	TTAA	3 cut(s)	504, 698, 1152
Tru9I	TTAA	3 cut(s)	504, 698, 1152
TscAI	CASTG	1 cut(s)	271
TseI	GCWGC	7 cut(s)	154, 269, 535, 634, 794, 1046, 1307
TspDTI	ATGAA	9 cut(s)	43, 211, 305, 469, 537, 696, 823, 885, 1461
TspRI	CASTG	1 cut(s)	271
Tth111I	GACNNNGTC	1 cut(s)	200
VpaK11BI	GGWCC	2 cut(s)	111, 1294
XapI	RAATTY	4 cut(s)	161, 493, 683, 742
XceI	RCATGY	4 cut(s)	178, 817, 1115, 1274
XhoI	CTCGAG	1 cut(s)	903
XmiI	GTMKAC	1 cut(s)	96
XmnI	GAANNNNTTC	2 cut(s)	687, 1146
XspI	CTAG	2 cut(s)	1302, 1474
ZraI	GACGTC	1 cut(s)	142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.