Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008476

Physical Location & Seq

Genomic Coordinates Forward (+)

28695487 .. 28699800

Gene Structure 4314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g38820.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGTCCAATTCCAATCGGACGCTTATTGAAAACGCCGACGTCTTCACGGGGCTGCACGACTTCCTCGAACGCATGCGTCAACCGTCCGCCGGCGACTTCGTCAAGTCTATCAAAAGTTTCATTGTTTCGTTTTCGAACGATGCTCGTGATCCGGAGAGGGACAGTGCGGCGGTGCAGAGCTTCTTTGCGCAAATGGAAGTGGATTTTAGGGTTCATCCACTTTGGGCTGGCTGTTCTGAAGAGGAGCTCGATAGTGCTGGCGAGGGACTGGAGAAGTATGTCATGACAAAGTTATTTACTCGTGTATTTGCTTCACTTCCAGATGATGTAAGACTTGACAACGTACTACACGAGAAGATGGCTTTAGTTCAGCAATTCATTCGGCCAGAAAATTTGGATATCAAGCCCGCCTTTCAAAATGAAACATCATGGCTGCTTGCACAGAAAGAACTGCAAAAGATCAATATGTACAAGGCACCAAGGGACAAGCTTGTGTGTATACTCAATTGTTGCAAGGTTATCAATAACTTGCTGCACAATGCTTCTATTGCTTCAAATGAGAATACCCACGGAGCTGATGAATTTCTTCCTGTCTTAATTTATGTTACCTTGAAGGCAAACCCTCCGCAACTGCACTCAAATTTGTTGTATATACAAAGATACAGGCGACAATCTCGATTAGTAGCAGAAGCAGCCTACTTTTTCACTAACATGCTATCTGTCGAATCCTTCATTTCAAATATGGATGCAAATGCCCTGTCAATGGATGAAACTGAGTTTGAAAAGAACATGGAATCTGCTCAAGCAATTCTATCAGGACTATCGACTGATTTGAACAGCCAGCCTGATCAAGGCGGTCAGCCTGTGAATATAAACAAGGAGCCAACAGCACCCCCCAAATCATCAAAAGTTCCATCACTTTCAGATTTGGAGGATAAGGGTGCAGCACTCCTTGTAAATGATAAGCAGGCAAGCCAGGTTTTCCGGCAGTATCCATACTTGTTTGCACATGTTGGTGATCTAACAGTCAATGATGTAGAAGACCTTCTTAATAATTACAAACAGCTTGTTTTCAAGTATGTTTGTCTCTCCAAAGGATTAGGTGATTCTGCTCCATCTCTTCCTCTAAAGGGTTCAGAAACAAAGGATCACCAGCATGTTGAAACTGCAAAGCAACAGGACCATACTAGCGCCGCAGAGCCTAATGATGAGCCATCAAAGGATACTGATACAAAAGATGATGGTTCTAATACAGAGTCTCTTTTTGAAGTGGAAAGTTTAGAATCTCAATTGTCACAGGATCAACCAGTAGCCCCACAAGACAGTAAACATGAAGAGTCCTCTCAGTCACAGCTCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000919 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007049 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016020 GO:0016043 GO:0017016 GO:0017048 GO:0019899 GO:0022402 GO:0022414 GO:0022607 GO:0022622 GO:0031267 GO:0032501 GO:0032502 GO:0032506 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048364 GO:0048528 GO:0048608 GO:0048731 GO:0048856 GO:0051020 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0065009 GO:0071554 GO:0071840 GO:0090696 GO:0098772 GO:0099402 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

VPS9

Protein Analysis

454

Amino Acids

50.67

Weight (kDa)

4.8

Isoelectric Point (pI)

43.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF5601	PF18151	35 - 99	9.7e-14	Domain of unknown function (DUF5601)
VPS9	PF02204	145 - 249	5.9e-30	Vacuolar sorting protein 9 (VPS9) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19770 AT3G19770 AT5G09320
fragaria_vesca	FvH4_5g38820 FvH4_5g38820
malus_domestica	MD00G1104300.v1.1 MD15G1358700.v1.1
prunus_persica	Prupe.1G506400_v2.0.a1 Prupe.1G506400_v2.0.a1
pyrus_communis	pycom08g14820 pycom15g32120
rosa_chinensis	RchiOBHm_Chr7g0240821
rosa_laevigata	RLG00000000622
rosa_multiflora	Rmu_sc0004821.1_g000014 Rmu_sc0010888.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219600
rosa_rugosa	Rorug07G0339300 Rorug07G0339300
rosa_samantha	Rh7AG493500 Rh7BG465500 Rh7CG512000 Rh7DG478700
rosa_wichuraiana	Rw7G041760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	42
Acc16I	TGCGCA	1 cut(s)	189
AccB1I	GGYRCC	1 cut(s)	475
AccI	GTMKAC	1 cut(s)	499
AccIII	TCCGGA	1 cut(s)	151
AciI	CCGC	7 cut(s)	87, 167, 170, 408, 626, 855, 1194
AclWI	GGATC	3 cut(s)	143, 1155, 1308
AcoI	YGGCCR	1 cut(s)	383
AcsI	RAATTY	3 cut(s)	391, 581, 640
AcuI	CTGAAG	1 cut(s)	258
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	2 cut(s)	345, 470
AfiI	CCNNNNNNNGG	4 cut(s)	89, 763, 851, 1130
AflIII	ACRYGT	1 cut(s)	1009
AjnI	CCWGG	1 cut(s)	975
AluBI	AGCT	6 cut(s)	180, 247, 490, 575, 1066, 1354
AluI	AGCT	6 cut(s)	180, 247, 490, 575, 1066, 1354
Alw21I	GWGCWC	1 cut(s)	249
Alw26I	GTCTC	2 cut(s)	1091, 1263
AlwI	GGATC	3 cut(s)	143, 1155, 1308
Aor13HI	TCCGGA	1 cut(s)	151
AoxI	GGCC	1 cut(s)	383
ApeKI	GCWGC	5 cut(s)	52, 433, 532, 692, 944
ApoI	RAATTY	3 cut(s)	391, 581, 640
ArsI	GACNNNNNNTTYG	2 cut(s)	743, 775
Asp700I	GAANNNNTTC	2 cut(s)	585, 1044
AspLEI	GCGC	2 cut(s)	190, 1193
AspS9I	GGNCC	1 cut(s)	1180
AsuHPI	GGTGA	3 cut(s)	1028, 1115, 1142
AsuII	TTCGAA	1 cut(s)	134
AvaII	GGWCC	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	475
BanII	GRGCYC	1 cut(s)	249
BarI	GAAGNNNNNNTAC	2 cut(s)	1029, 1061
BauI	CACGAG	3 cut(s)	144, 300, 350
BbsI	GAAGAC	2 cut(s)	34, 1047
Bbv12I	GWGCWC	1 cut(s)	249
BbvI	GCAGC	5 cut(s)	39, 420, 519, 704, 956
BccI	CCATC	5 cut(s)	352, 922, 1123, 1222, 1235
BcgI	CGANNNNNNTGC	2 cut(s)	362, 396
BciT130I	CCWGG	1 cut(s)	977
BciVI	GTATCC	2 cut(s)	1002, 1216
BclI	TGATCA	1 cut(s)	847
BcoDI	GTCTC	2 cut(s)	1091, 1263
BfaI	CTAG	1 cut(s)	1188
BfoI	RGCGCY	1 cut(s)	1194
BfuI	GTATCC	2 cut(s)	1002, 1216
BisI	GCNGC	7 cut(s)	53, 168, 434, 533, 693, 945, 1194
BlsI	GCNGC	7 cut(s)	54, 169, 435, 534, 694, 946, 1195
Bme1390I	CCNGG	1 cut(s)	977
Bme18I	GGWCC	1 cut(s)	1180
BmgT120I	GGNCC	1 cut(s)	1180
BmiI	GGNNCC	2 cut(s)	477, 882
BmrFI	CCNGG	1 cut(s)	977
BmsI	GCATC	2 cut(s)	130, 736
BpiI	GAAGAC	2 cut(s)	34, 1047
BpmI	CTGGAG	1 cut(s)	290
Bpu14I	TTCGAA	1 cut(s)	134
BpuEI	CTTGAG	1 cut(s)	786
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	2 cut(s)	479, 568
BsaWI	WCCGGW	1 cut(s)	151
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 763, 851, 1130
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	2 cut(s)	273, 1307
BseAI	TCCGGA	1 cut(s)	151
BseBI	CCWGG	1 cut(s)	977
BseDI	CCNNGG	2 cut(s)	479, 568
BseGI	GGATG	3 cut(s)	214, 751, 772
BseLI	CCNNNNNNNGG	4 cut(s)	89, 763, 851, 1130
BseMII	CTCAG	2 cut(s)	765, 1358
BseNI	ACTGG	2 cut(s)	273, 1307
BseRI	GAGGAG	1 cut(s)	257
BseXI	GCAGC	5 cut(s)	39, 420, 519, 704, 956
BsgI	GTGCAG	5 cut(s)	38, 194, 518, 617, 963
BshFI	GGCC	1 cut(s)	385
BshNI	GGYRCC	1 cut(s)	475
BsiHKAI	GWGCWC	1 cut(s)	249
BsiSI	CCGG	3 cut(s)	90, 152, 985
BslFI	GGGAC	3 cut(s)	173, 279, 497
BslI	CCNNNNNNNGG	4 cut(s)	89, 763, 851, 1130
BsmAI	GTCTC	2 cut(s)	1091, 1263
BsmFI	GGGAC	3 cut(s)	173, 279, 497
BsnI	GGCC	1 cut(s)	385
Bsp119I	TTCGAA	1 cut(s)	134
Bsp1286I	GDGCHC	1 cut(s)	249
Bsp13I	TCCGGA	1 cut(s)	151
Bsp1407I	TGTACA	1 cut(s)	468
Bsp143I	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
BspACI	CCGC	7 cut(s)	87, 167, 170, 408, 626, 855, 1194
BspANI	GGCC	1 cut(s)	385
BspCNI	CTCAG	2 cut(s)	766, 1357
BspEI	TCCGGA	1 cut(s)	151
BspHI	TCATGA	1 cut(s)	282
BspLI	GGNNCC	2 cut(s)	477, 882
BspPI	GGATC	3 cut(s)	143, 1155, 1308
BspT104I	TTCGAA	1 cut(s)	134
BspT107I	GGYRCC	1 cut(s)	475
BsrFI	RCCGGY	1 cut(s)	89
BsrGI	TGTACA	1 cut(s)	468
BsrI	ACTGG	2 cut(s)	273, 1307
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	2 cut(s)	479, 568
BssMI	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
BssNAI	GTATAC	1 cut(s)	500
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	3 cut(s)	144, 300, 350
BssT1I	CCWWGG	1 cut(s)	479
Bst1107I	GTATAC	1 cut(s)	500
Bst2BI	CACGAG	3 cut(s)	144, 300, 350
Bst2UI	CCWGG	1 cut(s)	977
Bst4CI	ACNGT	4 cut(s)	84, 164, 1027, 1325
Bst6I	CTCTTC	3 cut(s)	234, 1125, 1329
BstACI	GRCGYC	1 cut(s)	39
BstAUI	TGTACA	1 cut(s)	468
BstBI	TTCGAA	1 cut(s)	134
BstC8I	GCNNGC	9 cut(s)	74, 91, 229, 259, 408, 438, 842, 969, 973
BstDEI	CTNAG	3 cut(s)	774, 1344, 1355
BstDSI	CCRYGG	1 cut(s)	568
BstENI	CCTNNNNNAGG	1 cut(s)	849
BstF5I	GGATG	3 cut(s)	214, 751, 772
BstH2I	RGCGCY	1 cut(s)	1194
BstHHI	GCGC	2 cut(s)	190, 1193
BstKTI	GATC	6 cut(s)	151, 462, 850, 1021, 1150, 1303
BstMAI	GTCTC	2 cut(s)	1091, 1263
BstMBI	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
BstMWI	GCNNNNNNNGC	2 cut(s)	548, 692
BstNI	CCWGG	1 cut(s)	977
BstNSI	RCATGY	4 cut(s)	76, 715, 1013, 1160
BstSCI	CCNGG	1 cut(s)	975
BstV1I	GCAGC	5 cut(s)	39, 420, 519, 704, 956
BstV2I	GAAGAC	2 cut(s)	34, 1047
BstZ17I	GTATAC	1 cut(s)	500
BsuI	GTATCC	2 cut(s)	1002, 1216
BsuRI	GGCC	1 cut(s)	385
BtgI	CCRYGG	1 cut(s)	568
BtsCI	GGATG	3 cut(s)	214, 751, 772
BtsIMutI	CAGTG	1 cut(s)	169
Cac8I	GCNNGC	9 cut(s)	74, 91, 229, 259, 408, 438, 842, 969, 973
CciI	TCATGA	1 cut(s)	282
CfoI	GCGC	2 cut(s)	190, 1193
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	1 cut(s)	1180
CseI	GACGC	2 cut(s)	28, 65
Csp6I	GTAC	2 cut(s)	344, 469
CviAII	CATG	8 cut(s)	73, 283, 429, 712, 790, 1010, 1157, 1331
CviQI	GTAC	2 cut(s)	344, 469
DdeI	CTNAG	3 cut(s)	774, 1344, 1355
DpnI	GATC	6 cut(s)	150, 461, 849, 1020, 1149, 1302
DpnII	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
EaeI	YGGCCR	1 cut(s)	383
Eam1104I	CTCTTC	3 cut(s)	234, 1125, 1329
EarI	CTCTTC	3 cut(s)	234, 1125, 1329
EciI	GGCGGA	1 cut(s)	76
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	1 cut(s)	479
Eco24I	GRGCYC	1 cut(s)	249
Eco32I	GATATC	1 cut(s)	400
Eco47I	GGWCC	1 cut(s)	1180
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	1 cut(s)	258
EcoICRI	GAGCTC	1 cut(s)	247
EcoNI	CCTNNNNNAGG	1 cut(s)	849
EcoRII	CCWGG	1 cut(s)	975
EcoRV	GATATC	1 cut(s)	400
EcoT14I	CCWWGG	1 cut(s)	479
EcoT38I	GRGCYC	1 cut(s)	249
ErhI	CCWWGG	1 cut(s)	479
FaeI	CATG	8 cut(s)	76, 286, 432, 715, 793, 1013, 1160, 1334
FalI	AAGNNNNNCTT	4 cut(s)	395, 427, 1032, 1064
FaqI	GGGAC	3 cut(s)	173, 279, 497
FatI	CATG	8 cut(s)	72, 282, 428, 711, 789, 1009, 1156, 1330
FauI	CCCGC	1 cut(s)	415
FbaI	TGATCA	1 cut(s)	847
FblI	GTMKAC	1 cut(s)	499
Fnu4HI	GCNGC	7 cut(s)	53, 168, 434, 533, 693, 945, 1194
FokI	GGATG	3 cut(s)	201, 758, 779
FriOI	GRGCYC	1 cut(s)	249
Fsp4HI	GCNGC	7 cut(s)	53, 168, 434, 533, 693, 945, 1194
FspBI	CTAG	1 cut(s)	1188
FspI	TGCGCA	1 cut(s)	189
GlaI	GCGC	2 cut(s)	189, 1192
GluI	GCNGC	7 cut(s)	53, 168, 434, 533, 693, 945, 1194
GsuI	CTGGAG	1 cut(s)	290
HaeII	RGCGCY	1 cut(s)	1194
HaeIII	GGCC	1 cut(s)	385
HapII	CCGG	3 cut(s)	90, 152, 985
HgaI	GACGC	2 cut(s)	28, 65
HhaI	GCGC	2 cut(s)	190, 1193
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	8 cut(s)	76, 286, 432, 715, 793, 1013, 1160, 1334
Hin6I	GCGC	2 cut(s)	188, 1191
HinP1I	GCGC	2 cut(s)	188, 1191
HincII	GTYRAC	1 cut(s)	80
HindII	GTYRAC	1 cut(s)	80
HindIII	AAGCTT	1 cut(s)	488
HinfI	GANTC	6 cut(s)	725, 794, 1106, 1256, 1283, 1337
HpaII	CCGG	3 cut(s)	90, 152, 985
HphI	GGTGA	3 cut(s)	1028, 1115, 1142
Hpy166II	GTNNAC	3 cut(s)	80, 500, 1328
Hpy188I	TCNGA	4 cut(s)	18, 238, 925, 1138
Hpy188III	TCNNGA	6 cut(s)	146, 152, 283, 320, 675, 816
Hpy8I	GTNNAC	3 cut(s)	80, 500, 1328
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	3 cut(s)	607, 739, 1055
HpyCH4III	ACNGT	4 cut(s)	84, 164, 1027, 1325
HpyCH4IV	ACGT	2 cut(s)	39, 342
HpyF10VI	GCNNNNNNNGC	2 cut(s)	548, 692
HpyF3I	CTNAG	3 cut(s)	774, 1344, 1355
HpySE526I	ACGT	2 cut(s)	39, 342
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	8 cut(s)	76, 286, 432, 715, 793, 1013, 1160, 1334
HspAI	GCGC	2 cut(s)	188, 1191
Kpn2I	TCCGGA	1 cut(s)	151
KroI	GCCGGC	1 cut(s)	89
KroNI	GCCGGC	1 cut(s)	91
Ksp22I	TGATCA	1 cut(s)	847
Kzo9I	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
LmnI	GCTCC	4 cut(s)	244, 572, 880, 1117
Lsp1109I	GCAGC	5 cut(s)	39, 420, 519, 704, 956
LweI	GCATC	2 cut(s)	130, 736
MaeI	CTAG	1 cut(s)	1188
MaeII	ACGT	2 cut(s)	39, 342
MaeIII	GTNAC	3 cut(s)	604, 1293, 1347
MalI	GATC	6 cut(s)	150, 461, 849, 1020, 1149, 1302
MboI	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
MboII	GAAGA	7 cut(s)	34, 251, 367, 578, 1052, 1112, 1346
MfeI	CAATTG	2 cut(s)	505, 1289
MhlI	GDGCHC	1 cut(s)	249
MlyI	GAGTC	2 cut(s)	1265, 1346
MnlI	CCTC	8 cut(s)	74, 150, 235, 256, 633, 925, 1134, 1351
MreI	CGCCGGCG	1 cut(s)	89
MroI	TCCGGA	1 cut(s)	151
MroNI	GCCGGC	1 cut(s)	89
MroXI	GAANNNNTTC	2 cut(s)	585, 1044
MseI	TTAA	3 cut(s)	596, 1050, 1360
MslI	CAYNNNNRTG	3 cut(s)	710, 1014, 1155
MspI	CCGG	3 cut(s)	90, 152, 985
MspR9I	CCNGG	1 cut(s)	977
MunI	CAATTG	2 cut(s)	505, 1289
MvaI	CCWGG	1 cut(s)	977
MwoI	GCNNNNNNNGC	2 cut(s)	548, 692
NaeI	GCCGGC	1 cut(s)	91
NdeII	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
NgoMIV	GCCGGC	1 cut(s)	89
NlaIII	CATG	8 cut(s)	76, 286, 432, 715, 793, 1013, 1160, 1334
NlaIV	GGNNCC	2 cut(s)	477, 882
NmuCI	GTSAC	2 cut(s)	1293, 1347
NsbI	TGCGCA	1 cut(s)	189
NspI	RCATGY	4 cut(s)	76, 715, 1013, 1160
NspV	TTCGAA	1 cut(s)	134
PaeI	GCATGC	1 cut(s)	76
PagI	TCATGA	1 cut(s)	282
PciI	ACATGT	1 cut(s)	1009
PcsI	WCGNNNNNNNCGW	2 cut(s)	63, 348
PdiI	GCCGGC	1 cut(s)	91
PdmI	GAANNNNTTC	2 cut(s)	585, 1044
PfeI	GAWTC	4 cut(s)	725, 794, 1106, 1283
PflFI	GACNNNGTC	1 cut(s)	98
PkrI	GCNGC	7 cut(s)	54, 169, 435, 534, 694, 946, 1195
PleI	GAGTC	2 cut(s)	1264, 1345
PpsI	GAGTC	2 cut(s)	1264, 1345
PscI	ACATGT	1 cut(s)	1009
Psp124BI	GAGCTC	1 cut(s)	249
Psp6I	CCWGG	1 cut(s)	975
PspGI	CCWGG	1 cut(s)	975
PspN4I	GGNNCC	2 cut(s)	477, 882
PspPI	GGNCC	1 cut(s)	1180
PsyI	GACNNNGTC	1 cut(s)	98
RsaI	GTAC	2 cut(s)	345, 470
RsaNI	GTAC	2 cut(s)	344, 469
RseI	CAYNNNNRTG	3 cut(s)	710, 1014, 1155
SacI	GAGCTC	1 cut(s)	249
SaqAI	TTAA	3 cut(s)	596, 1050, 1360
SatI	GCNGC	7 cut(s)	53, 168, 434, 533, 693, 945, 1194
Sau3AI	GATC	6 cut(s)	148, 459, 847, 1018, 1147, 1300
Sau96I	GGNCC	1 cut(s)	1180
SchI	GAGTC	2 cut(s)	1265, 1346
ScrFI	CCNGG	1 cut(s)	977
SduI	GDGCHC	1 cut(s)	249
SfaNI	GCATC	2 cut(s)	130, 736
SfuI	TTCGAA	1 cut(s)	134
SgrAI	CRCCGGYG	1 cut(s)	89
SinI	GGWCC	1 cut(s)	1180
SmiMI	CAYNNNNRTG	3 cut(s)	710, 1014, 1155
SmlI	CTYRAG	1 cut(s)	801
SmoI	CTYRAG	1 cut(s)	801
SphI	GCATGC	1 cut(s)	76
SsiI	CCGC	7 cut(s)	87, 167, 170, 408, 626, 855, 1194
SspMI	CTAG	1 cut(s)	1188
SstI	GAGCTC	1 cut(s)	249
StyD4I	CCNGG	1 cut(s)	975
StyI	CCWWGG	1 cut(s)	479
TaaI	ACNGT	4 cut(s)	84, 164, 1027, 1325
TaiI	ACGT	2 cut(s)	42, 345
TaqI	TCGA	6 cut(s)	66, 134, 249, 676, 723, 824
TatI	WGTACW	1 cut(s)	468
TauI	GCSGC	2 cut(s)	170, 1196
TfiI	GAWTC	4 cut(s)	725, 794, 1106, 1283
Tru1I	TTAA	3 cut(s)	596, 1050, 1360
Tru9I	TTAA	3 cut(s)	596, 1050, 1360
TscAI	CASTG	1 cut(s)	169
TseFI	GTSAC	2 cut(s)	1293, 1347
TseI	GCWGC	5 cut(s)	52, 433, 532, 692, 944
Tsp45I	GTSAC	2 cut(s)	1293, 1347
TspDTI	ATGAA	8 cut(s)	109, 203, 367, 435, 594, 721, 783, 1347
TspGWI	ACGGA	1 cut(s)	585
TspRI	CASTG	1 cut(s)	169
Tth111I	GACNNNGTC	1 cut(s)	98
VpaK11BI	GGWCC	1 cut(s)	1180
XagI	CCTNNNNNAGG	1 cut(s)	849
XapI	RAATTY	3 cut(s)	391, 581, 640
XceI	RCATGY	4 cut(s)	76, 715, 1013, 1160
XmiI	GTMKAC	1 cut(s)	499
XmnI	GAANNNNTTC	2 cut(s)	585, 1044
XspI	CTAG	1 cut(s)	1188
ZraI	GACGTC	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.