Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008267

Physical Location & Seq

Genomic Coordinates Reverse (-)

3081389 .. 3085291

Gene Structure 3903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G09880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGAGTTTGACGAATACGAGTACCTGGAGAAGACGGTTGAGGAAGGAGCTGGGTCGAATAAGAAAAAGGAAGAGAGTGGGAACGAGAGGAGCGAGAGGAGTTACAGAAAGAGAGAAGGAGGAGAGAGGCAGGGGGAAGAAGGAGGTGAAGAAGAGCGGGTTAGCAGTCGGAGTAAGAAGTCTCGCGGAGACGGCGAAGAGAACGGTGGTGGTAAGAGGGATCGGGAGAGAGAGAGGCATAGGAGCAGCAGAGACAAGGATAGGGAGAGGGATAAGGTTAGAGAAGGATCGAGAGATAAAGAGAGCGATCGAGAGAGGAGTAGCAAGGAGAGAGATAGGAGCGATAGAGACAAACCCCGAGACAGAGAGAGAAGAGAGAGGGAGAAGAGGAGCAGCAGTAGATCTCGGAGGGAAGAGAAGGAACCCGAAGTAGTGGAAAGAGGAAGCAGAAGACACAGGGACAAGAAAGATGAGCCTGAAGCAGATCCAGAGAGAGATCAAAGAACTGTTTTTGCATATCAGATGCCTCTTAAAGCTACGGAGAGAGATGTTTATGAGTTCTTCTCCAAAGCGGGCAAGGTGAGGGATGTGCGATTGATCATGGACAGAAATTCAAGACGATCAAAAGGCGTCGGGTATATTGAGTTTTATGACGTGATGTCAGTTCCAATGGCCATAGCTCTGTCTGGACAACTGTTTCTTGGACAACCTGTGATGGTTAAGCCCTCTGAAGCTGAAAAGAATCTGGCCCAATCTAACAGCACTACGGTTGGTGGTACAGGCCCTGCAGATAGGAAACTCTATGTGGGTAACCTGCATTTCAACATGTCGGAACTGCAGCTTAGACAGATTTTTGAGGCATTTGGTCCCGTTGAGCTTGTTCAGCTACCACTTGATCCTGAAACTGGGCAGTGCAAAGGATTTGGATTTATTCAGTTTGTTCAACTTGAACATTCAAAGGCAGCACAAATTGCCTTAAATGGAAAGCTGGAGATTGCTGGTAGGACAATCAAGGTTTCTTCCGTCTCTGATCATATTGGTACACAAGATTCTGCTCCAAAATCTGCTGATTTTGATGATGATGATGGAGGTGGACTGGCTTTAAATGCACAATCTAGGGCTATGCTTATGCAGAAGCTGGATCGTTCAGGTATCGCTACAAGCATTGTGGGCTCTCTTGGAGTACCAGGGCTAAATGGAGCAGCGTTTAATCAACCAGGCATGAATCCTAGTTTCCCAACATCAGTGCTTCCGACAACAGCAATCCCTTCTTTTGTCAATGAACATGTTGGTCTGCCAAGCGAATGCCTTCTATTGAAGAATATGTTTGATCCTGCAACCGAGACGGAACCAAACTTTGATCTTGAAATCAGAGACGACGTTGCGGATGAATGTTCAAAGTATGGCCCAGTCAACCATATATACGTAGACAAGAACAGTGCGGGGTTTGTGTATCTGAGGTTTCAATCAGTGGAGGCAGCAGCAGCAGCTCAAAGAGCAATGCATATGAGATGGTTTGCACAAAAGATGATATCTGCAACTTTCATGCCTCCTCATGAATATGAAGCCAAAGCCAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005815 GO:0005856 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010556 GO:0010557 GO:0010604 GO:0015630 GO:0016070 GO:0016604 GO:0016607 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

527

Amino Acids

59.38

Weight (kDa)

6.26

Isoelectric Point (pI)

55.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	175 - 237	2.6e-11	RNA recognition motif
RRM_1	PF00076	267 - 338	2.5e-18	RNA recognition motif
RBM39linker	PF15519	358 - 453	6.4e-23	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09880
fragaria_vesca	FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920
malus_domestica	MD01G1009900.v1.1 MD15G1339600.v1.1
prunus_persica	Prupe.6G161000_v2.0.a1
pyrus_communis	pycom01g03620 pycom15g29960
rosa_chinensis	RchiOBHm_Chr2g0119921
rosa_laevigata	RLG00000018502
rosa_multiflora	Rmu_sc0001501.1_g000003
rosa_roxburghii	Rroxscaffold_2G00123990
rosa_rugosa	Rorug02G0225300 Rorug02G0225400
rosa_samantha	Rh2AG282500 Rh2BG293900 Rh2DG307700
rosa_wichuraiana	Rw2G022550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	822
AccBSI	CCGCTC	1 cut(s)	157
AccI	GTMKAC	1 cut(s)	1428
AccII	CGCG	1 cut(s)	186
AciI	CCGC	5 cut(s)	157, 186, 572, 1385, 1442
AclWI	GGATC	6 cut(s)	228, 295, 479, 890, 1149, 1325
AcoI	YGGCCR	1 cut(s)	672
AcsI	RAATTY	1 cut(s)	610
AcuI	CTGAAG	2 cut(s)	498, 750
AcyI	GRCGYC	1 cut(s)	630
AfaI	GTAC	4 cut(s)	23, 778, 1042, 1185
AfiI	CCNNNNNNNGG	1 cut(s)	905
AflIII	ACRYGT	2 cut(s)	825, 1285
AgsI	TTSAA	9 cut(s)	615, 823, 944, 950, 957, 1318, 1367, 1398, 1466
AhdI	GACNNNNNGTC	1 cut(s)	658
AjiI	CACGTC	1 cut(s)	655
AjnI	CCWGG	3 cut(s)	24, 1186, 1216
Alw26I	GTCTC	8 cut(s)	183, 186, 246, 342, 354, 1030, 1337, 1368
AlwI	GGATC	6 cut(s)	228, 295, 479, 890, 1149, 1325
AlwNI	CAGNNNCTG	2 cut(s)	785, 1138
Ama87I	CYCGRG	1 cut(s)	357
AoxI	GGCC	5 cut(s)	672, 747, 781, 1405, 1578
ApeKI	GCWGC	9 cut(s)	246, 393, 838, 962, 1202, 1478, 1481, 1484, 1487
ApoI	RAATTY	1 cut(s)	610
Asp700I	GAANNNNTTC	1 cut(s)	1308
AspS9I	GGNCC	4 cut(s)	748, 782, 866, 1406
AsuHPI	GGTGA	2 cut(s)	158, 592
AvaI	CYCGRG	1 cut(s)	357
AvaII	GGWCC	1 cut(s)	866
BalI	TGGCCA	1 cut(s)	674
BanII	GRGCYC	1 cut(s)	1175
BbsI	GAAGAC	2 cut(s)	38, 457
BbvI	GCAGC	9 cut(s)	258, 405, 850, 974, 1214, 1490, 1493, 1496, 1499
BccI	CCATC	3 cut(s)	709, 1079, 1506
BceAI	ACGGC	1 cut(s)	208
BciT130I	CCWGG	3 cut(s)	26, 1188, 1218
BclI	TGATCA	2 cut(s)	597, 1030
BcoDI	GTCTC	8 cut(s)	183, 186, 246, 342, 354, 1030, 1337, 1368
BfaI	CTAG	2 cut(s)	1116, 1230
BfmI	CTRYAG	2 cut(s)	786, 836
BfuAI	ACCTGC	1 cut(s)	822
BglII	AGATCT	1 cut(s)	401
BisI	GCNGC	9 cut(s)	247, 394, 839, 963, 1203, 1479, 1482, 1485, 1488
BlsI	GCNGC	9 cut(s)	248, 395, 840, 964, 1204, 1480, 1483, 1486, 1489
Bme1390I	CCNGG	3 cut(s)	26, 1188, 1218
Bme18I	GGWCC	1 cut(s)	866
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmeT110I	CYCGRG	1 cut(s)	357
BmgBI	CACGTC	1 cut(s)	655
BmgT120I	GGNCC	4 cut(s)	748, 782, 866, 1406
BmiI	GGNNCC	3 cut(s)	423, 868, 1350
BmrFI	CCNGG	3 cut(s)	26, 1188, 1218
BmrI	ACTGGG	2 cut(s)	915, 1403
BmsI	GCATC	1 cut(s)	513
BmuI	ACTGGG	2 cut(s)	915, 1403
BpiI	GAAGAC	2 cut(s)	38, 457
BplI	GAGNNNNNCTC	2 cut(s)	548, 580
BpmI	CTGGAG	2 cut(s)	47, 1010
BsaAI	YACGTR	1 cut(s)	1426
BsaHI	GRCGYC	1 cut(s)	630
BsaJI	CCNNGG	2 cut(s)	1187, 1575
BsaXI	ACNNNNNCTCC	2 cut(s)	382, 412
Bsc4I	CCNNNNNNNGG	1 cut(s)	905
Bse1I	ACTGG	3 cut(s)	910, 1101, 1409
Bse3DI	GCAATG	1 cut(s)	1506
BseBI	CCWGG	3 cut(s)	26, 1188, 1218
BseDI	CCNNGG	2 cut(s)	1187, 1575
BseGI	GGATG	2 cut(s)	592, 1393
BseLI	CCNNNNNNNGG	1 cut(s)	905
BseMI	GCAATG	1 cut(s)	1506
BseMII	CTCAG	1 cut(s)	1448
BseNI	ACTGG	3 cut(s)	910, 1101, 1409
BseRI	GAGGAG	6 cut(s)	103, 112, 135, 331, 403, 1542
BseXI	GCAGC	9 cut(s)	258, 405, 850, 974, 1214, 1490, 1493, 1496, 1499
BseYI	CCCAGC	1 cut(s)	50
Bsh1236I	CGCG	1 cut(s)	186
Bsh1285I	CGRYCG	1 cut(s)	310
BshFI	GGCC	5 cut(s)	674, 749, 783, 1407, 1580
BsiEI	CGRYCG	1 cut(s)	310
BsiHKCI	CYCGRG	1 cut(s)	357
BslFI	GGGAC	2 cut(s)	473, 852
BslI	CCNNNNNNNGG	1 cut(s)	905
BsmAI	GTCTC	8 cut(s)	183, 186, 246, 342, 354, 1030, 1337, 1368
BsmBI	CGTCTC	4 cut(s)	183, 1030, 1337, 1368
BsmFI	GGGAC	2 cut(s)	473, 852
BsmI	GAATGC	1 cut(s)	1310
BsnI	GGCC	5 cut(s)	674, 749, 783, 1407, 1580
BsoBI	CYCGRG	1 cut(s)	357
Bsp1286I	GDGCHC	1 cut(s)	1175
BspACI	CCGC	5 cut(s)	157, 186, 572, 1385, 1442
BspANI	GGCC	5 cut(s)	674, 749, 783, 1407, 1580
BspCNI	CTCAG	1 cut(s)	1449
BspFNI	CGCG	1 cut(s)	186
BspHI	TCATGA	1 cut(s)	1555
BspLI	GGNNCC	3 cut(s)	423, 868, 1350
BspMAI	CTGCAG	2 cut(s)	790, 840
BspMI	ACCTGC	1 cut(s)	822
BspPI	GGATC	6 cut(s)	228, 295, 479, 890, 1149, 1325
BspQI	GCTCTTC	1 cut(s)	147
BsrBI	CCGCTC	1 cut(s)	157
BsrDI	GCAATG	1 cut(s)	1506
BsrI	ACTGG	3 cut(s)	910, 1101, 1409
BssECI	CCNNGG	2 cut(s)	1187, 1575
BssNI	GRCGYC	1 cut(s)	630
BssT1I	CCWWGG	1 cut(s)	1575
Bst2UI	CCWGG	3 cut(s)	26, 1188, 1218
Bst4CI	ACNGT	6 cut(s)	37, 206, 508, 696, 769, 1439
Bst6I	CTCTTC	6 cut(s)	66, 147, 192, 367, 380, 408
BstACI	GRCGYC	1 cut(s)	630
BstAPI	GCANNNNNTGC	1 cut(s)	971
BstBAI	YACGTR	1 cut(s)	1426
BstC8I	GCNNGC	1 cut(s)	574
BstDEI	CTNAG	2 cut(s)	842, 1457
BstEII	GGTNACC	1 cut(s)	809
BstF5I	GGATG	2 cut(s)	592, 1393
BstFNI	CGCG	1 cut(s)	186
BstMAI	GTCTC	8 cut(s)	183, 186, 246, 342, 354, 1030, 1337, 1368
BstMCI	CGRYCG	1 cut(s)	310
BstMWI	GCNNNNNNNGC	8 cut(s)	192, 883, 971, 1106, 1170, 1484, 1487, 1496
BstNI	CCWGG	3 cut(s)	26, 1188, 1218
BstNSI	RCATGY	2 cut(s)	829, 1289
BstPI	GGTNACC	1 cut(s)	809
BstSCI	CCNGG	3 cut(s)	24, 1186, 1216
BstSFI	CTRYAG	2 cut(s)	786, 836
BstSNI	TACGTA	1 cut(s)	1426
BstUI	CGCG	1 cut(s)	186
BstV1I	GCAGC	9 cut(s)	258, 405, 850, 974, 1214, 1490, 1493, 1496, 1499
BstV2I	GAAGAC	2 cut(s)	38, 457
BstX2I	RGATCY	2 cut(s)	401, 484
BstYI	RGATCY	2 cut(s)	401, 484
BsuRI	GGCC	5 cut(s)	674, 749, 783, 1407, 1580
BtrI	CACGTC	1 cut(s)	655
BtsCI	GGATG	2 cut(s)	592, 1393
BtsI	GCAGTG	1 cut(s)	917
BtsIMutI	CAGTG	4 cut(s)	917, 1251, 1444, 1476
BveI	ACCTGC	1 cut(s)	822
Cac8I	GCNNGC	1 cut(s)	574
CaiI	CAGNNNCTG	2 cut(s)	785, 1138
CciI	TCATGA	1 cut(s)	1555
Cfr13I	GGNCC	4 cut(s)	748, 782, 866, 1406
CseI	GACGC	1 cut(s)	619
Csp6I	GTAC	4 cut(s)	22, 777, 1041, 1184
CspCI	CAANNNNNGTGG	2 cut(s)	1149, 1184
CviAII	CATG	6 cut(s)	601, 826, 1222, 1286, 1546, 1556
CviQI	GTAC	4 cut(s)	22, 777, 1041, 1184
DdeI	CTNAG	2 cut(s)	842, 1457
DraI	TTTAAA	1 cut(s)	1104
DriI	GACNNNNNGTC	1 cut(s)	658
EaeI	YGGCCR	1 cut(s)	672
Eam1104I	CTCTTC	6 cut(s)	66, 147, 192, 367, 380, 408
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	6 cut(s)	66, 147, 192, 367, 380, 408
Eco105I	TACGTA	1 cut(s)	1426
Eco130I	CCWWGG	1 cut(s)	1575
Eco147I	AGGCCT	1 cut(s)	1580
Eco24I	GRGCYC	1 cut(s)	1175
Eco32I	GATATC	1 cut(s)	1533
Eco47I	GGWCC	1 cut(s)	866
Eco57I	CTGAAG	2 cut(s)	498, 750
Eco88I	CYCGRG	1 cut(s)	357
Eco91I	GGTNACC	1 cut(s)	809
EcoO109I	RGGNCCY	1 cut(s)	782
EcoO65I	GGTNACC	1 cut(s)	809
EcoRII	CCWGG	3 cut(s)	24, 1186, 1216
EcoRV	GATATC	1 cut(s)	1533
EcoT14I	CCWWGG	1 cut(s)	1575
EcoT22I	ATGCAT	1 cut(s)	1506
EcoT38I	GRGCYC	1 cut(s)	1175
ErhI	CCWWGG	1 cut(s)	1575
Esp3I	CGTCTC	4 cut(s)	183, 1030, 1337, 1368
FaeI	CATG	6 cut(s)	604, 829, 1225, 1289, 1549, 1559
FaqI	GGGAC	2 cut(s)	473, 852
FatI	CATG	6 cut(s)	600, 825, 1221, 1285, 1545, 1555
FauI	CCCGC	3 cut(s)	150, 565, 1435
FauNDI	CATATG	1 cut(s)	1506
FbaI	TGATCA	2 cut(s)	597, 1030
FblI	GTMKAC	1 cut(s)	1428
Fnu4HI	GCNGC	9 cut(s)	247, 394, 839, 963, 1203, 1479, 1482, 1485, 1488
FokI	GGATG	2 cut(s)	599, 1400
FriOI	GRGCYC	1 cut(s)	1175
Fsp4HI	GCNGC	9 cut(s)	247, 394, 839, 963, 1203, 1479, 1482, 1485, 1488
FspBI	CTAG	2 cut(s)	1116, 1230
GluI	GCNGC	9 cut(s)	247, 394, 839, 963, 1203, 1479, 1482, 1485, 1488
GsaI	CCCAGC	1 cut(s)	54
GsuI	CTGGAG	2 cut(s)	47, 1010
HaeIII	GGCC	5 cut(s)	674, 749, 783, 1407, 1580
HgaI	GACGC	1 cut(s)	619
Hin1I	GRCGYC	1 cut(s)	630
Hin1II	CATG	6 cut(s)	604, 829, 1225, 1289, 1549, 1559
HincII	GTYRAC	1 cut(s)	1414
HindII	GTYRAC	1 cut(s)	1414
HinfI	GANTC	3 cut(s)	742, 1049, 1225
HphI	GGTGA	2 cut(s)	158, 592
Hpy166II	GTNNAC	4 cut(s)	1043, 1094, 1414, 1429
Hpy188I	TCNGA	9 cut(s)	171, 408, 522, 730, 832, 1030, 1254, 1373, 1458
Hpy188III	TCNNGA	9 cut(s)	224, 291, 311, 488, 615, 687, 899, 1364, 1556
Hpy8I	GTNNAC	4 cut(s)	1043, 1094, 1414, 1429
Hpy99I	CGWCG	2 cut(s)	635, 1382
HpyAV	CCTTC	7 cut(s)	38, 110, 134, 278, 412, 1278, 1319
HpyCH4III	ACNGT	6 cut(s)	37, 206, 508, 696, 769, 1439
HpyCH4IV	ACGT	3 cut(s)	654, 1380, 1425
HpyF10VI	GCNNNNNNNGC	8 cut(s)	192, 883, 971, 1106, 1170, 1484, 1487, 1496
HpyF3I	CTNAG	2 cut(s)	842, 1457
HpySE526I	ACGT	3 cut(s)	654, 1380, 1425
Hsp92I	GRCGYC	1 cut(s)	630
Hsp92II	CATG	6 cut(s)	604, 829, 1225, 1289, 1549, 1559
Ksp22I	TGATCA	2 cut(s)	597, 1030
LguI	GCTCTTC	1 cut(s)	147
LmnI	GCTCC	7 cut(s)	47, 90, 243, 339, 390, 1060, 1199
Lsp1109I	GCAGC	9 cut(s)	258, 405, 850, 974, 1214, 1490, 1493, 1496, 1499
LweI	GCATC	1 cut(s)	513
MaeI	CTAG	2 cut(s)	1116, 1230
MaeII	ACGT	3 cut(s)	654, 1380, 1425
MaeIII	GTNAC	2 cut(s)	101, 809
MbiI	CCGCTC	1 cut(s)	157
MflI	RGATCY	2 cut(s)	401, 484
MhlI	GDGCHC	1 cut(s)	1175
MlsI	TGGCCA	1 cut(s)	674
MluCI	AATT	2 cut(s)	610, 969
MluNI	TGGCCA	1 cut(s)	674
MmeI	TCCRAC	3 cut(s)	149, 810, 1277
Mox20I	TGGCCA	1 cut(s)	674
Mph1103I	ATGCAT	1 cut(s)	1506
MroXI	GAANNNNTTC	1 cut(s)	1308
MscI	TGGCCA	1 cut(s)	674
MseI	TTAA	5 cut(s)	531, 720, 977, 1103, 1209
MslI	CAYNNNNRTG	1 cut(s)	1560
Msp20I	TGGCCA	1 cut(s)	674
MspR9I	CCNGG	3 cut(s)	26, 1188, 1218
Mva1269I	GAATGC	1 cut(s)	1310
MvaI	CCWGG	3 cut(s)	26, 1188, 1218
MvnI	CGCG	1 cut(s)	186
MwoI	GCNNNNNNNGC	8 cut(s)	192, 883, 971, 1106, 1170, 1484, 1487, 1496
NdeI	CATATG	1 cut(s)	1506
NlaIII	CATG	6 cut(s)	604, 829, 1225, 1289, 1549, 1559
NlaIV	GGNNCC	3 cut(s)	423, 868, 1350
NsiI	ATGCAT	1 cut(s)	1506
NspI	RCATGY	2 cut(s)	829, 1289
PagI	TCATGA	1 cut(s)	1555
PceI	AGGCCT	1 cut(s)	1580
PciI	ACATGT	2 cut(s)	825, 1285
PciSI	GCTCTTC	1 cut(s)	147
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	1310
PdmI	GAANNNNTTC	1 cut(s)	1308
PfeI	GAWTC	3 cut(s)	742, 1049, 1225
PkrI	GCNGC	9 cut(s)	248, 395, 840, 964, 1204, 1480, 1483, 1486, 1489
Ple19I	CGATCG	1 cut(s)	310
Ppu21I	YACGTR	1 cut(s)	1426
PscI	ACATGT	2 cut(s)	825, 1285
Psp6I	CCWGG	3 cut(s)	24, 1186, 1216
PspEI	GGTNACC	1 cut(s)	809
PspFI	CCCAGC	1 cut(s)	50
PspGI	CCWGG	3 cut(s)	24, 1186, 1216
PspN4I	GGNNCC	3 cut(s)	423, 868, 1350
PspPI	GGNCC	4 cut(s)	748, 782, 866, 1406
PstI	CTGCAG	2 cut(s)	790, 840
PstNI	CAGNNNCTG	2 cut(s)	785, 1138
PsuI	RGATCY	2 cut(s)	401, 484
PvuI	CGATCG	1 cut(s)	310
RsaI	GTAC	4 cut(s)	23, 778, 1042, 1185
RsaNI	GTAC	4 cut(s)	22, 777, 1041, 1184
RseI	CAYNNNNRTG	1 cut(s)	1560
SapI	GCTCTTC	1 cut(s)	147
SaqAI	TTAA	5 cut(s)	531, 720, 977, 1103, 1209
SatI	GCNGC	9 cut(s)	247, 394, 839, 963, 1203, 1479, 1482, 1485, 1488
Sau96I	GGNCC	4 cut(s)	748, 782, 866, 1406
ScrFI	CCNGG	3 cut(s)	26, 1188, 1218
SduI	GDGCHC	1 cut(s)	1175
SfaNI	GCATC	1 cut(s)	513
SfcI	CTRYAG	2 cut(s)	786, 836
SinI	GGWCC	1 cut(s)	866
SmiMI	CAYNNNNRTG	1 cut(s)	1560
SnaBI	TACGTA	1 cut(s)	1426
Sse9I	AATT	2 cut(s)	610, 969
SseBI	AGGCCT	1 cut(s)	1580
SsiI	CCGC	5 cut(s)	157, 186, 572, 1385, 1442
SspMI	CTAG	2 cut(s)	1116, 1230
StuI	AGGCCT	1 cut(s)	1580
StyD4I	CCNGG	3 cut(s)	24, 1186, 1216
StyI	CCWWGG	1 cut(s)	1575
TaaI	ACNGT	6 cut(s)	37, 206, 508, 696, 769, 1439
TaiI	ACGT	3 cut(s)	657, 1383, 1428
TaqI	TCGA	3 cut(s)	56, 290, 310
TasI	AATT	2 cut(s)	610, 969
TfiI	GAWTC	3 cut(s)	742, 1049, 1225
Tru1I	TTAA	5 cut(s)	531, 720, 977, 1103, 1209
Tru9I	TTAA	5 cut(s)	531, 720, 977, 1103, 1209
TscAI	CASTG	4 cut(s)	917, 1251, 1444, 1476
TseI	GCWGC	9 cut(s)	246, 393, 838, 962, 1202, 1478, 1481, 1484, 1487
TspDTI	ATGAA	6 cut(s)	1238, 1296, 1404, 1534, 1572, 1578
TspGWI	ACGGA	3 cut(s)	554, 1012, 1361
TspRI	CASTG	4 cut(s)	917, 1251, 1444, 1476
VpaK11BI	GGWCC	1 cut(s)	866
XapI	RAATTY	1 cut(s)	610
XceI	RCATGY	2 cut(s)	829, 1289
XmiI	GTMKAC	1 cut(s)	1428
XmnI	GAANNNNTTC	1 cut(s)	1308
XspI	CTAG	2 cut(s)	1116, 1230
Zsp2I	ATGCAT	1 cut(s)	1506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.