Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0008267

Physical Location & Seq

Genomic Coordinates Reverse (-)

15760500 .. 15768491

Gene Structure 7992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g23920.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGACTTCGACGAGTACGATTACCTGGAGAAGACCGTGCAGGAGAACGACGACCGCGACTCTAAGAAGAAGGCTGCGAAGAAGGAAGAGAAGAGCTACCGGAAGAGAGAGGTAGACGACGACGTTTCGGGCGACGAGGACAGGAAGAACAGCAAGAGGTCCAGAGGCGGCGACCACGAGAATGGCCGCGATAAGGACAAGGATAAGGATAGGGATCGCCACCACCGGAGCAGCGGCGGCGGAAGAGAGAGGGACAGAGACGGGGAGAGAGACCGCGACCGTGATCGCGGCGGCGAGCGAGAGAAGGAGAGGGATAGAGAGAGGAGCAGTAGAGAGAAGGAGAAGGAGAGGGAGAGGAGGGACAGGGATAAGGAGAAGGAGAAGGAGAGAGAGAGGGAGAGGAGGGAGAGGAGAGAGAAGGATGAGAAGGAGAGGTCTCGGAGGAGTGTGAGTAGATCGGATCGGGAAGAGAAGGAGAGGTCCCGGAGGAGTGTGAGCCGGTCCGAGAGGGAAGAGAAGGAGAGGTCTCGGAGGAGTGTGAGCCGTTCCGAGAGGGAAGAGAAGGAGAGGTCTCGGAGGAGTAGGAGCCACACTGATCGTGACAGGGAGAGGGAAGTTAGGGAGAAGGAACGCGAATTCGAGATGAATGAGAGCAGGAGGTTTAAAGACAAAAAAGAAATGGCAGAGCCTGAAGCTGATCCAGAAAGGGATCAGAGAACTGTTTTTGCTTACCAGATGCCACTGAAGGCGACCGAGCGAGATGTTTATGAATTCTTCTCAAAAGCGGGCAAGGTGAGGGATGTGCGGCTGATCATGGACAGGAATTCAAGACGATCGAAAGGTGTTGGGTATATTGAATTTTATGATGCAATGCATGTGCCAATGGCTATAGCTCTCTCCGGCCAGCTACTTCTTGGACAACCTGTGATGGTGAAACCTTCGGAGGCAGAAAAGAATCTTGTTCAATCTACTGCTTCCGGTGGTACCACTGGCGTAGTAGGACCATACGGTGCAGTTGACAGGAAACTTTATGTAGGGAACTTGCATTTTAACATGACTGAGACTCATCTTAGAGAGATTTTTGAACCATTTGGTCCAGTGGAGCTCGTGCAACTTCCCCTTGATATTGAGACATCACAGTGCAAGGGGTTTGGCTTTGTTCAATTTGCTCATCTAGAACATGCAAAAGCAGCTCAAAGTTTGAATGGGAAGTTGGACATTGCTGGTCGAACTATCAAGGTTTCATCCGTTACAGATCATGTTGGCTCACAAGAAGCTGGAGCAAAATCTGCTGATTTTGATGATGATGATGGTGGTGGTTTGTCTCTAAATGCTCAATCTAGAGCATTGCTAATGCAAAAGCTGGACCGCACAGGAGCTGCCACAAGTATTGCAGGTTCTCTTGGAGTTCCTGTGCTGAATGGGTCAGCAACAAATCAACGAGCTGTTAATTTGCCGATGAATGGTCAAACTACACTTTCTGCACCATTTCTTCCAGCAAGAGTTATGCCAACTGCGGAACCTATTGGAAACCCCAGTGAATGTCTTTTATTGAAAGATATGTTTGATCCAGCCACGGAGACGGAACCAGATTTTGATGTAGACATTAAAGATGATGTCGAAGAGGAATGCTCAAAATATGGTCGTGTGAAGCATATTTATGTGGAAAAAAACAGTGCTGGTTTTGTGTATTTGTGGTTTGAAACTGTGGAAGCAGCAGCTGCAGCGCAACGTGCAATGCATCTGAGATGGTTTGCAGGCAGGCAGATTTCAGCCCTGTTCATGCAACCACAAGTTTACGCAGCGAAGTTTGGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005815 GO:0005856 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010556 GO:0010557 GO:0010604 GO:0015630 GO:0016070 GO:0016604 GO:0016607 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

607

Amino Acids

69.72

Weight (kDa)

7.23

Isoelectric Point (pI)

55.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	216 - 278	1.4e-10	RNA recognition motif
RRM_1	PF00076	313 - 383	4.3e-19	RNA recognition motif
RBM39linker	PF15519	403 - 502	9.7e-21	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09880
fragaria_vesca	FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920
malus_domestica	MD01G1009900.v1.1 MD15G1339600.v1.1
prunus_persica	Prupe.6G161000_v2.0.a1
pyrus_communis	pycom01g03620 pycom15g29960
rosa_chinensis	RchiOBHm_Chr2g0119921
rosa_laevigata	RLG00000018502
rosa_multiflora	Rmu_sc0001501.1_g000003
rosa_roxburghii	Rroxscaffold_2G00123990
rosa_rugosa	Rorug02G0225300 Rorug02G0225400
rosa_samantha	Rh2AG282500 Rh2BG293900 Rh2DG307700
rosa_wichuraiana	Rw2G022550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1385
Acc65I	GGTACC	1 cut(s)	983
AccB1I	GGYRCC	1 cut(s)	983
AccI	GTMKAC	2 cut(s)	114, 1602
AccII	CGCG	5 cut(s)	57, 189, 276, 288, 633
AclWI	GGATC	5 cut(s)	222, 468, 692, 717, 1562
AcoI	YGGCCR	2 cut(s)	184, 901
AcsI	RAATTY	4 cut(s)	635, 770, 823, 857
AcuI	CTGAAG	2 cut(s)	711, 764
AfaI	GTAC	2 cut(s)	17, 985
AfiI	CCNNNNNNNGG	2 cut(s)	193, 1463
AgsI	TTSAA	8 cut(s)	828, 857, 965, 1085, 1163, 1204, 1555, 1703
AjnI	CCWGG	1 cut(s)	24
AjuI	GAANNNNNNNTTGG	2 cut(s)	1196, 1228
Alw21I	GWGCWC	1 cut(s)	1107
Alw26I	GTCTC	9 cut(s)	252, 264, 441, 531, 576, 1055, 1124, 1329, 1574
AlwI	GGATC	5 cut(s)	222, 468, 692, 717, 1562
AlwNI	CAGNNNCTG	3 cut(s)	689, 1379, 1721
AoxI	GGCC	2 cut(s)	184, 901
ApeKI	GCWGC	9 cut(s)	74, 231, 1190, 1379, 1715, 1718, 1721, 1724, 1802
ApoI	RAATTY	4 cut(s)	635, 770, 823, 857
Asp718I	GGTACC	1 cut(s)	983
AspLEI	GCGC	1 cut(s)	1729
AspS9I	GGNCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
AsuC2I	CCSGG	1 cut(s)	484
AsuHPI	GGTGA	2 cut(s)	805, 943
AvaII	GGWCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
BanI	GGYRCC	1 cut(s)	983
BanII	GRGCYC	1 cut(s)	1107
BauI	CACGAG	2 cut(s)	176, 1106
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	1 cut(s)	1107
BbvI	GCAGC	9 cut(s)	61, 243, 1202, 1366, 1708, 1727, 1730, 1736, 1814
BccI	CCATC	3 cut(s)	922, 1304, 1743
BceAI	ACGGC	1 cut(s)	528
BciT130I	CCWGG	1 cut(s)	26
BclI	TGATCA	1 cut(s)	810
BcnI	CCSGG	1 cut(s)	484
BcoDI	GTCTC	9 cut(s)	252, 264, 441, 531, 576, 1055, 1124, 1329, 1574
BfaI	CTAG	2 cut(s)	1175, 1341
BfmI	CTRYAG	2 cut(s)	888, 1722
BfuAI	ACCTGC	1 cut(s)	1385
Bme1390I	CCNGG	2 cut(s)	26, 484
Bme18I	GGWCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
BmgT120I	GGNCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
BmiI	GGNNCC	5 cut(s)	482, 587, 985, 1521, 1587
BmrFI	CCNGG	2 cut(s)	26, 484
BmrI	ACTGGG	1 cut(s)	1530
BmsI	GCATC	3 cut(s)	726, 856, 1750
BmuI	ACTGGG	1 cut(s)	1530
BpiI	GAAGAC	1 cut(s)	38
BplI	GAGNNNNNCTC	2 cut(s)	1616, 1648
BpmI	CTGGAG	2 cut(s)	47, 1299
BpuMI	CCSGG	1 cut(s)	484
BsaBI	GATNNNNATC	1 cut(s)	213
BsaI	GGTCTC	4 cut(s)	264, 441, 531, 576
BsaJI	CCNNGG	1 cut(s)	1575
BsaWI	WCCGGW	3 cut(s)	99, 225, 977
BsaXI	ACNNNNNCTCC	4 cut(s)	436, 466, 1398, 1428
Bsc4I	CCNNNNNNNGG	2 cut(s)	193, 1463
Bse118I	RCCGGY	1 cut(s)	498
Bse1I	ACTGG	3 cut(s)	994, 1097, 1536
Bse3DI	GCAATG	4 cut(s)	876, 1218, 1346, 1743
Bse8I	GATNNNNATC	1 cut(s)	213
BseBI	CCWGG	1 cut(s)	26
BseDI	CCNNGG	1 cut(s)	1575
BseGI	GGATG	3 cut(s)	427, 805, 1244
BseJI	GATNNNNATC	1 cut(s)	213
BseLI	CCNNNNNNNGG	2 cut(s)	193, 1463
BseMI	GCAATG	4 cut(s)	876, 1218, 1346, 1743
BseMII	CTCAG	2 cut(s)	1050, 1736
BseNI	ACTGG	3 cut(s)	994, 1097, 1536
BseRI	GAGGAG	8 cut(s)	337, 370, 415, 424, 457, 502, 547, 592
BseXI	GCAGC	9 cut(s)	61, 243, 1202, 1366, 1708, 1727, 1730, 1736, 1814
BsgI	GTGCAG	3 cut(s)	59, 1032, 1467
Bsh1236I	CGCG	5 cut(s)	57, 189, 276, 288, 633
Bsh1285I	CGRYCG	4 cut(s)	55, 280, 753, 836
BshFI	GGCC	2 cut(s)	186, 903
BshNI	GGYRCC	1 cut(s)	983
BsiEI	CGRYCG	4 cut(s)	55, 280, 753, 836
BsiHKAI	GWGCWC	1 cut(s)	1107
BsiSI	CCGG	6 cut(s)	100, 226, 484, 499, 900, 978
BslFI	GGGAC	3 cut(s)	266, 374, 466
BslI	CCNNNNNNNGG	2 cut(s)	193, 1463
BsmAI	GTCTC	9 cut(s)	252, 264, 441, 531, 576, 1055, 1124, 1329, 1574
BsmBI	CGTCTC	2 cut(s)	252, 1574
BsmFI	GGGAC	3 cut(s)	266, 374, 466
BsmI	GAATGC	1 cut(s)	1634
BsnI	GGCC	2 cut(s)	186, 903
Bso31I	GGTCTC	4 cut(s)	264, 441, 531, 576
Bsp1286I	GDGCHC	1 cut(s)	1107
BspANI	GGCC	2 cut(s)	186, 903
BspCNI	CTCAG	2 cut(s)	1051, 1737
BspFNI	CGCG	5 cut(s)	57, 189, 276, 288, 633
BspLI	GGNNCC	5 cut(s)	482, 587, 985, 1521, 1587
BspMAI	CTGCAG	1 cut(s)	1726
BspMI	ACCTGC	1 cut(s)	1385
BspPI	GGATC	5 cut(s)	222, 468, 692, 717, 1562
BspQI	GCTCTTC	1 cut(s)	86
BspT107I	GGYRCC	1 cut(s)	983
BspTNI	GGTCTC	4 cut(s)	264, 441, 531, 576
BsrDI	GCAATG	4 cut(s)	876, 1218, 1346, 1743
BsrFI	RCCGGY	1 cut(s)	498
BsrI	ACTGG	3 cut(s)	994, 1097, 1536
BssAI	RCCGGY	1 cut(s)	498
BssECI	CCNNGG	1 cut(s)	1575
BssSI	CACGAG	2 cut(s)	176, 1106
Bst2BI	CACGAG	2 cut(s)	176, 1106
Bst2UI	CCWGG	1 cut(s)	26
Bst4CI	ACNGT	7 cut(s)	37, 281, 721, 1010, 1140, 1676, 1708
Bst6I	CTCTTC	8 cut(s)	81, 86, 98, 238, 462, 507, 552, 1617
BstAPI	GCANNNNNTGC	2 cut(s)	1289, 1721
BstC8I	GCNNGC	5 cut(s)	296, 787, 905, 1759, 1763
BstDEI	CTNAG	4 cut(s)	63, 1059, 1070, 1745
BstDSI	CCRYGG	1 cut(s)	1575
BstF5I	GGATG	3 cut(s)	427, 805, 1244
BstFNI	CGCG	5 cut(s)	57, 189, 276, 288, 633
BstHHI	GCGC	1 cut(s)	1729
BstMAI	GTCTC	9 cut(s)	252, 264, 441, 531, 576, 1055, 1124, 1329, 1574
BstMCI	CGRYCG	4 cut(s)	55, 280, 753, 836
BstMWI	GCNNNNNNNGC	6 cut(s)	237, 1190, 1289, 1721, 1724, 1733
BstNI	CCWGG	1 cut(s)	26
BstNSI	RCATGY	2 cut(s)	878, 1184
BstSCI	CCNGG	2 cut(s)	24, 482
BstSFI	CTRYAG	2 cut(s)	888, 1722
BstUI	CGCG	5 cut(s)	57, 189, 276, 288, 633
BstV1I	GCAGC	9 cut(s)	61, 243, 1202, 1366, 1708, 1727, 1730, 1736, 1814
BstV2I	GAAGAC	1 cut(s)	38
BstXI	CCANNNNNNTGG	1 cut(s)	182
BsuRI	GGCC	2 cut(s)	186, 903
BtgI	CCRYGG	1 cut(s)	1575
BtsCI	GGATG	3 cut(s)	427, 805, 1244
BtsIMutI	CAGTG	7 cut(s)	591, 740, 987, 1104, 1145, 1543, 1681
BveI	ACCTGC	1 cut(s)	1385
Cac8I	GCNNGC	5 cut(s)	296, 787, 905, 1759, 1763
CaiI	CAGNNNCTG	3 cut(s)	689, 1379, 1721
CfoI	GCGC	1 cut(s)	1729
Cfr10I	RCCGGY	1 cut(s)	498
Cfr13I	GGNCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
CpoI	CGGWCCG	1 cut(s)	501
Csp6I	GTAC	2 cut(s)	16, 984
CspCI	CAANNNNNGTGG	2 cut(s)	1372, 1407
CspI	CGGWCCG	1 cut(s)	501
CviAII	CATG	6 cut(s)	814, 875, 1054, 1181, 1259, 1783
CviQI	GTAC	2 cut(s)	16, 984
DdeI	CTNAG	4 cut(s)	63, 1059, 1070, 1745
DraI	TTTAAA	1 cut(s)	664
EaeI	YGGCCR	2 cut(s)	184, 901
Eam1104I	CTCTTC	8 cut(s)	81, 86, 98, 238, 462, 507, 552, 1617
EarI	CTCTTC	8 cut(s)	81, 86, 98, 238, 462, 507, 552, 1617
EciI	GGCGGA	1 cut(s)	255
Ecl136II	GAGCTC	1 cut(s)	1105
Eco24I	GRGCYC	1 cut(s)	1107
Eco31I	GGTCTC	4 cut(s)	264, 441, 531, 576
Eco47I	GGWCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
Eco53kI	GAGCTC	1 cut(s)	1105
Eco57I	CTGAAG	2 cut(s)	711, 764
EcoICRI	GAGCTC	1 cut(s)	1105
EcoO109I	RGGNCCY	1 cut(s)	480
EcoRI	GAATTC	3 cut(s)	635, 770, 823
EcoRII	CCWGG	1 cut(s)	24
EcoT22I	ATGCAT	2 cut(s)	876, 1743
EcoT38I	GRGCYC	1 cut(s)	1107
Esp3I	CGTCTC	2 cut(s)	252, 1574
FaeI	CATG	6 cut(s)	817, 878, 1057, 1184, 1262, 1786
FaqI	GGGAC	3 cut(s)	266, 374, 466
FatI	CATG	6 cut(s)	813, 874, 1053, 1180, 1258, 1782
FauI	CCCGC	1 cut(s)	778
FbaI	TGATCA	1 cut(s)	810
FblI	GTMKAC	2 cut(s)	114, 1602
FokI	GGATG	3 cut(s)	434, 812, 1231
FriOI	GRGCYC	1 cut(s)	1107
FspBI	CTAG	2 cut(s)	1175, 1341
GlaI	GCGC	1 cut(s)	1728
GsuI	CTGGAG	2 cut(s)	47, 1299
HaeIII	GGCC	2 cut(s)	186, 903
HapII	CCGG	6 cut(s)	100, 226, 484, 499, 900, 978
HhaI	GCGC	1 cut(s)	1729
Hin1II	CATG	6 cut(s)	817, 878, 1057, 1184, 1262, 1786
Hin6I	GCGC	1 cut(s)	1727
HinP1I	GCGC	1 cut(s)	1727
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HinfI	GANTC	3 cut(s)	59, 955, 1063
HpaII	CCGG	6 cut(s)	100, 226, 484, 499, 900, 978
HphI	GGTGA	2 cut(s)	805, 943
Hpy166II	GTNNAC	4 cut(s)	115, 1018, 1603, 1798
Hpy188I	TCNGA	9 cut(s)	441, 460, 505, 531, 550, 576, 714, 943, 1746
Hpy188III	TCNNGA	8 cut(s)	162, 464, 599, 640, 701, 828, 1175, 1341
Hpy8I	GTNNAC	4 cut(s)	115, 1018, 1603, 1798
Hpy99I	CGWCG	5 cut(s)	14, 53, 122, 125, 137
HpyCH4III	ACNGT	7 cut(s)	37, 281, 721, 1010, 1140, 1676, 1708
HpyCH4IV	ACGT	2 cut(s)	123, 1732
HpyF10VI	GCNNNNNNNGC	6 cut(s)	237, 1190, 1289, 1721, 1724, 1733
HpyF3I	CTNAG	4 cut(s)	63, 1059, 1070, 1745
HpySE526I	ACGT	2 cut(s)	123, 1732
Hsp92II	CATG	6 cut(s)	817, 878, 1057, 1184, 1262, 1786
HspAI	GCGC	1 cut(s)	1727
KpnI	GGTACC	1 cut(s)	987
Ksp22I	TGATCA	1 cut(s)	810
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	7 cut(s)	228, 324, 585, 1102, 1280, 1376, 1814
Lsp1109I	GCAGC	9 cut(s)	61, 243, 1202, 1366, 1708, 1727, 1730, 1736, 1814
LweI	GCATC	3 cut(s)	726, 856, 1750
MaeI	CTAG	2 cut(s)	1175, 1341
MaeII	ACGT	2 cut(s)	123, 1732
MaeIII	GTNAC	2 cut(s)	599, 1249
MhlI	GDGCHC	1 cut(s)	1107
MluCI	AATT	6 cut(s)	635, 770, 823, 857, 1163, 1450
MlyI	GAGTC	2 cut(s)	53, 1057
MmeI	TCCRAC	1 cut(s)	1194
Mph1103I	ATGCAT	2 cut(s)	876, 1743
MseI	TTAA	5 cut(s)	663, 1050, 1449, 1608, 1819
MslI	CAYNNNNRTG	3 cut(s)	180, 1138, 1659
MspA1I	CMGCKG	2 cut(s)	234, 1721
MspI	CCGG	6 cut(s)	100, 226, 484, 499, 900, 978
MspR9I	CCNGG	2 cut(s)	26, 484
Mva1269I	GAATGC	1 cut(s)	1634
MvaI	CCWGG	1 cut(s)	26
MvnI	CGCG	5 cut(s)	57, 189, 276, 288, 633
MwoI	GCNNNNNNNGC	6 cut(s)	237, 1190, 1289, 1721, 1724, 1733
NciI	CCSGG	1 cut(s)	484
NlaIII	CATG	6 cut(s)	817, 878, 1057, 1184, 1262, 1786
NlaIV	GGNNCC	5 cut(s)	482, 587, 985, 1521, 1587
NmuCI	GTSAC	1 cut(s)	599
NsiI	ATGCAT	2 cut(s)	876, 1743
NspI	RCATGY	2 cut(s)	878, 1184
PciSI	GCTCTTC	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	3 cut(s)	15, 54, 129
PctI	GAATGC	1 cut(s)	1634
PfeI	GAWTC	1 cut(s)	955
PfoI	TCCNGGA	1 cut(s)	482
Ple19I	CGATCG	1 cut(s)	836
PleI	GAGTC	2 cut(s)	53, 1057
PpsI	GAGTC	2 cut(s)	53, 1057
PpuMI	RGGWCCY	1 cut(s)	480
Psp124BI	GAGCTC	1 cut(s)	1107
Psp5II	RGGWCCY	1 cut(s)	480
Psp6I	CCWGG	1 cut(s)	24
PspGI	CCWGG	1 cut(s)	24
PspN4I	GGNNCC	5 cut(s)	482, 587, 985, 1521, 1587
PspPI	GGNCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
PspPPI	RGGWCCY	1 cut(s)	480
PsrI	GAACNNNNNNTAC	2 cut(s)	1381, 1413
PstI	CTGCAG	1 cut(s)	1726
PstNI	CAGNNNCTG	3 cut(s)	689, 1379, 1721
PvuI	CGATCG	1 cut(s)	836
PvuII	CAGCTG	1 cut(s)	1721
RsaI	GTAC	2 cut(s)	17, 985
RsaNI	GTAC	2 cut(s)	16, 984
RseI	CAYNNNNRTG	3 cut(s)	180, 1138, 1659
Rsr2I	CGGWCCG	1 cut(s)	501
RsrII	CGGWCCG	1 cut(s)	501
SacI	GAGCTC	1 cut(s)	1107
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	5 cut(s)	663, 1050, 1449, 1608, 1819
Sau96I	GGNCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
SchI	GAGTC	2 cut(s)	53, 1057
ScrFI	CCNGG	2 cut(s)	26, 484
SduI	GDGCHC	1 cut(s)	1107
SfaNI	GCATC	3 cut(s)	726, 856, 1750
SfcI	CTRYAG	2 cut(s)	888, 1722
SinI	GGWCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
SmiMI	CAYNNNNRTG	3 cut(s)	180, 1138, 1659
Sse9I	AATT	6 cut(s)	635, 770, 823, 857, 1163, 1450
SspMI	CTAG	2 cut(s)	1175, 1341
SstI	GAGCTC	1 cut(s)	1107
StyD4I	CCNGG	2 cut(s)	24, 482
TaaI	ACNGT	7 cut(s)	37, 281, 721, 1010, 1140, 1676, 1708
TaiI	ACGT	2 cut(s)	126, 1735
TaqI	TCGA	5 cut(s)	9, 639, 836, 1228, 1620
TaqII	GACCGA	1 cut(s)	767
TasI	AATT	6 cut(s)	635, 770, 823, 857, 1163, 1450
TauI	GCSGC	7 cut(s)	171, 189, 237, 240, 291, 294, 808
TfiI	GAWTC	1 cut(s)	955
Tru1I	TTAA	5 cut(s)	663, 1050, 1449, 1608, 1819
Tru9I	TTAA	5 cut(s)	663, 1050, 1449, 1608, 1819
TscAI	CASTG	7 cut(s)	598, 747, 994, 1104, 1145, 1543, 1681
TseFI	GTSAC	1 cut(s)	599
TseI	GCWGC	9 cut(s)	74, 231, 1190, 1379, 1715, 1718, 1721, 1724, 1802
Tsp45I	GTSAC	1 cut(s)	599
TspDTI	ATGAA	5 cut(s)	659, 783, 1233, 1475, 1771
TspGWI	ACGGA	3 cut(s)	1237, 1592, 1598
TspRI	CASTG	7 cut(s)	598, 747, 994, 1104, 1145, 1543, 1681
VpaK11BI	GGWCC	6 cut(s)	159, 480, 501, 1001, 1094, 1366
XapI	RAATTY	4 cut(s)	635, 770, 823, 857
XbaI	TCTAGA	2 cut(s)	1174, 1340
XceI	RCATGY	2 cut(s)	878, 1184
XcmI	CCANNNNNNNNNTGG	1 cut(s)	911
XmiI	GTMKAC	2 cut(s)	114, 1602
XspI	CTAG	2 cut(s)	1175, 1341
Zsp2I	ATGCAT	2 cut(s)	876, 1743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.