Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008267

Physical Location & Seq

Genomic Coordinates Forward (+)

38385238 .. 38393066

Gene Structure 7829 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1339600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGACTTCGACGAGTACGATTACCTGGAGAAGACTGTGCAGGAGAACGACGAGCGGGATCCGAAGAAGAAAACGAAGAAGGAAGGCACCGAGAAGAGCTACAGGAAGAGAGAGGTTGACGACGACGTTTCAGTGGGCGGCGAGGAGGACGATAGGAAGAGCAGTAAGAGGTCAAAGGCTGAGCACGAGAACGGGCGCGAGAAGGATCGGCACCATCGGACTGGAAGGGAGAGGGACCGAGAGAGCGAAAGGGATAAGGAACGGGATCGTGATCGCGGCGAGCGAGAGAGAGACAGAGAGAGGAGTAGCAGAGACAAGGAGAAGGATGCGGATAAGGACAAGGAGAGAGAAAGAGAGCGGAGGGAGAGGGATAAGGAGAGGGAAAGAGAGAAGGAAAAGGAAAGAGAGAGGAGAGATAGGAGAGAGAGGGAGGACAGACACAGAAGAGAGAAAGAGGAGAAAGAGAGGTCTAGGAGGAGCGTAAGCCGCTCCGACCGCGAAGAGAAAGAGAGGCCTCGCAGAAGTAGTGACCGAGAAGATAAAGAGCGGTCTCGCAGAAGTAGGAGCCGCTCGGAGCGTGATAGGGAGAGGGAAATTAGAGAAAGGGAACGAGAGCTTGAGCTGAGGGAGAGCAGGAGGTTTAAAGACAAAAAGGAAGCGATGGAGCCAGAAGCTGATCCGGAAAGGGATCAGAGAACTGTTTTTGCTTACCAGATGCCACTGAAGGCAGCTGAACGAGATGTTTATGAATTCTTCTCAAAAGCGGGCAAGGTGAGGGATGTACGCCTGATCATGGACAGGAATTCTAGACGGTCGAAAGGAGTTGGGTATATTGAGTTCTATGATGCAATGTCTGTGCCAATGGCTATAGCTCTCTCTGGCCAACTACTTCTGGGGCAACCTGTAATGGTGAAACCTTCGGAAGCTGAAAAGAATCTTGTTCAGTCCAACGCCACGAGTGGGGCTGCAGGCGTTGTTGGGCCATATGGTGCGGTTGATAGGAAACTGTATGTGGGGAACTTGCATTTTAACATGACTGAGACTCACCTTAGAGAGATTTTTGAACCATTTGGACCAGTGGAACTTGTGCAACTTCCCCTTGATCTTGAGACAGGACAGTGCAAGGGTTTTGGCTTTGTTCAATTTGCTCATCTAGAACATGCAAAGGCAGCTCAAAGTTTGAATGGAAAGTTGGAGATTGCTGGTCGAACTATCAAGGTTTCATCTGTTACAGATCATGTTGGATCTCAAGAGGCTGGAGCAAAATCTGCAGACTTTGATGATGATGATGGGGGTGGTTTGTCTTTAAATGCCCAATCTAGAGCACTGCTAATGCAGAAGCTGGATCGCTCTGGTATTGCCACAAGTATTGCGGGGTCTATTGGAGTTCCTGGGCTGAATGGGGCAGCTCCTAATCAACGAGCTGTTACGTTGCCTATCAATGGTCAAGCTGCAGTCTCTGCTCCTATTCTTCCAGCAGCAGTTGCAGTCAATGAACCCGTTGGAAACCCCAGCGAATGTCTACTACTGAAGAATATGTTCGATCCAGCCACTGAGAGGGAGCCAGATTTTGATGTAGACATTAAAGAGGATGTCGAAGAAGAATGTTCAAAATATGGCCGGGTGAAGCATATTTATGTGGACAAAAACAGTGCTGGTTTCGTGTACTTGCGGTTTGAAGCTGTGGAAGCAGCTGCTGCAGCTCAACGTGCAATGCATTTGAGATGGTTTGCGGGAAGGCTGATTTCAGCCCTGTTCATGCAACCACAAGTTTACGAGGCCAAGTTTGGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005815 GO:0005856 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010556 GO:0010557 GO:0010604 GO:0015630 GO:0016070 GO:0016604 GO:0016607 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

599

Amino Acids

68.87

Weight (kDa)

6.9

Isoelectric Point (pI)

49.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	240 - 301	6.8e-10	RNA recognition motif
RRM_1	PF00076	336 - 406	4.3e-20	RNA recognition motif
RBM39linker	PF15519	426 - 524	4.6e-21	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09880
fragaria_vesca	FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920
malus_domestica	MD01G1009900.v1.1 MD15G1339600.v1.1
prunus_persica	Prupe.6G161000_v2.0.a1
pyrus_communis	pycom01g03620 pycom15g29960
rosa_chinensis	RchiOBHm_Chr2g0119921
rosa_laevigata	RLG00000018502
rosa_multiflora	Rmu_sc0001501.1_g000003
rosa_roxburghii	Rroxscaffold_2G00123990
rosa_rugosa	Rorug02G0225300 Rorug02G0225400
rosa_samantha	Rh2AG282500 Rh2BG293900 Rh2DG307700
rosa_wichuraiana	Rw2G022550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	86, 210
AccBSI	CCGCTC	5 cut(s)	55, 358, 489, 547, 570
AccI	GTMKAC	2 cut(s)	1522, 1578
AccII	CGCG	3 cut(s)	198, 276, 498
AccIII	TCCGGA	1 cut(s)	679
AclWI	GGATC	9 cut(s)	53, 66, 213, 273, 671, 696, 1252, 1353, 1538
AcoI	YGGCCR	2 cut(s)	880, 1618
AcsI	RAATTY	2 cut(s)	749, 802
AcuI	CTGAAG	2 cut(s)	743, 1550
AfaI	GTAC	3 cut(s)	17, 783, 1667
AfiI	CCNNNNNNNGG	4 cut(s)	793, 960, 1442, 1557
AgsI	TTSAA	5 cut(s)	1064, 1142, 1183, 1611, 1679
AjnI	CCWGG	2 cut(s)	24, 1390
AjuI	GAANNNNNNNTTGG	2 cut(s)	1175, 1207
Alw21I	GWGCWC	2 cut(s)	186, 1327
Alw26I	GTCTC	6 cut(s)	285, 306, 555, 1034, 1103, 1462
AlwI	GGATC	9 cut(s)	53, 66, 213, 273, 671, 696, 1252, 1353, 1538
AlwNI	CAGNNNCTG	5 cut(s)	674, 1342, 1460, 1553, 1697
Aor13HI	TCCGGA	1 cut(s)	679
AoxI	GGCC	5 cut(s)	512, 880, 980, 1618, 1779
ApoI	RAATTY	2 cut(s)	749, 802
Asp700I	GAANNNNTTC	1 cut(s)	1538
AspLEI	GCGC	1 cut(s)	198
AspS9I	GGNCC	3 cut(s)	235, 980, 1073
AsuC2I	CCSGG	1 cut(s)	1622
AsuHPI	GGTGA	4 cut(s)	784, 922, 1037, 1636
AvaII	GGWCC	2 cut(s)	235, 1073
BalI	TGGCCA	1 cut(s)	882
BamHI	GGATCC	1 cut(s)	58
BanI	GGYRCC	2 cut(s)	86, 210
BauI	CACGAG	2 cut(s)	185, 955
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	2 cut(s)	186, 1327
BbvCI	CCTCAGC	1 cut(s)	623
BccI	CCATC	4 cut(s)	222, 655, 1283, 1719
BciT130I	CCWGG	2 cut(s)	26, 1392
BclI	TGATCA	1 cut(s)	789
BcnI	CCSGG	1 cut(s)	1622
BcoDI	GTCTC	6 cut(s)	285, 306, 555, 1034, 1103, 1462
BfaI	CTAG	4 cut(s)	471, 807, 1154, 1320
BfmI	CTRYAG	6 cut(s)	100, 867, 966, 1269, 1452, 1698
BlpI	GCTNAGC	1 cut(s)	180
Bme1390I	CCNGG	3 cut(s)	26, 1392, 1622
Bme18I	GGWCC	2 cut(s)	235, 1073
BmgT120I	GGNCC	3 cut(s)	235, 980, 1073
BmiI	GGNNCC	7 cut(s)	60, 88, 212, 236, 566, 666, 1563
BmrFI	CCNGG	3 cut(s)	26, 1392, 1622
BmsI	GCATC	3 cut(s)	316, 705, 835
BpiI	GAAGAC	1 cut(s)	38
BpmI	CTGGAG	2 cut(s)	47, 1278
Bpu10I	CCTNAGC	1 cut(s)	623
Bpu1102I	GCTNAGC	1 cut(s)	180
BpuEI	CTTGAG	3 cut(s)	638, 1127, 1233
BpuMI	CCSGG	1 cut(s)	1622
BsaBI	GATNNNNATC	1 cut(s)	270
BsaI	GGTCTC	1 cut(s)	555
BsaJI	CCNNGG	1 cut(s)	1391
BsaWI	WCCGGW	1 cut(s)	679
Bsc4I	CCNNNNNNNGG	4 cut(s)	793, 960, 1442, 1557
Bse1I	ACTGG	2 cut(s)	226, 1076
Bse3DI	GCAATG	2 cut(s)	855, 1719
Bse8I	GATNNNNATC	1 cut(s)	270
BseAI	TCCGGA	1 cut(s)	679
BseBI	CCWGG	2 cut(s)	26, 1392
BseDI	CCNNGG	1 cut(s)	1391
BseGI	GGATG	3 cut(s)	331, 784, 1597
BseJI	GATNNNNATC	1 cut(s)	270
BseLI	CCNNNNNNNGG	4 cut(s)	793, 960, 1442, 1557
BseMI	GCAATG	2 cut(s)	855, 1719
BseMII	CTCAG	4 cut(s)	171, 614, 1029, 1545
BseNI	ACTGG	2 cut(s)	226, 1076
BseRI	GAGGAG	5 cut(s)	158, 316, 424, 470, 490
BseYI	CCCAGC	1 cut(s)	1511
BsgI	GTGCAG	1 cut(s)	59
Bsh1236I	CGCG	3 cut(s)	198, 276, 498
Bsh1285I	CGRYCG	2 cut(s)	496, 815
BshFI	GGCC	5 cut(s)	514, 882, 982, 1620, 1781
BshNI	GGYRCC	2 cut(s)	86, 210
BsiEI	CGRYCG	2 cut(s)	496, 815
BsiHKAI	GWGCWC	2 cut(s)	186, 1327
BsiSI	CCGG	2 cut(s)	680, 1621
BslFI	GGGAC	1 cut(s)	248
BslI	CCNNNNNNNGG	4 cut(s)	793, 960, 1442, 1557
BsmAI	GTCTC	6 cut(s)	285, 306, 555, 1034, 1103, 1462
BsmFI	GGGAC	1 cut(s)	248
BsnI	GGCC	5 cut(s)	514, 882, 982, 1620, 1781
Bso31I	GGTCTC	1 cut(s)	555
Bsp1286I	GDGCHC	2 cut(s)	186, 1327
Bsp13I	TCCGGA	1 cut(s)	679
Bsp1720I	GCTNAGC	1 cut(s)	180
BspANI	GGCC	5 cut(s)	514, 882, 982, 1620, 1781
BspCNI	CTCAG	4 cut(s)	172, 615, 1030, 1546
BspEI	TCCGGA	1 cut(s)	679
BspFNI	CGCG	3 cut(s)	198, 276, 498
BspLI	GGNNCC	7 cut(s)	60, 88, 212, 236, 566, 666, 1563
BspMAI	CTGCAG	4 cut(s)	970, 1273, 1456, 1702
BspPI	GGATC	9 cut(s)	53, 66, 213, 273, 671, 696, 1252, 1353, 1538
BspQI	GCTCTTC	2 cut(s)	89, 152
BspT107I	GGYRCC	2 cut(s)	86, 210
BspTNI	GGTCTC	1 cut(s)	555
BsrBI	CCGCTC	5 cut(s)	55, 358, 489, 547, 570
BsrDI	GCAATG	2 cut(s)	855, 1719
BsrI	ACTGG	2 cut(s)	226, 1076
BssECI	CCNNGG	1 cut(s)	1391
BssSI	CACGAG	2 cut(s)	185, 955
Bst2BI	CACGAG	2 cut(s)	185, 955
Bst2UI	CCWGG	2 cut(s)	26, 1392
Bst4CI	ACNGT	6 cut(s)	37, 700, 813, 1008, 1119, 1652
Bst6I	CTCTTC	5 cut(s)	89, 101, 152, 439, 495
BstAPI	GCANNNNNTGC	4 cut(s)	1268, 1460, 1484, 1697
BstC8I	GCNNGC	3 cut(s)	281, 766, 970
BstDEI	CTNAG	5 cut(s)	180, 623, 1038, 1049, 1554
BstF5I	GGATG	3 cut(s)	331, 784, 1597
BstFNI	CGCG	3 cut(s)	198, 276, 498
BstHHI	GCGC	1 cut(s)	198
BstMAI	GTCTC	6 cut(s)	285, 306, 555, 1034, 1103, 1462
BstMCI	CGRYCG	2 cut(s)	496, 815
BstNI	CCWGG	2 cut(s)	26, 1392
BstNSI	RCATGY	1 cut(s)	1163
BstSCI	CCNGG	3 cut(s)	24, 1390, 1620
BstSFI	CTRYAG	6 cut(s)	100, 867, 966, 1269, 1452, 1698
BstUI	CGCG	3 cut(s)	198, 276, 498
BstV2I	GAAGAC	1 cut(s)	38
BstX2I	RGATCY	2 cut(s)	58, 1244
BstXI	CCANNNNNNTGG	1 cut(s)	221
BstYI	RGATCY	2 cut(s)	58, 1244
BsuRI	GGCC	5 cut(s)	514, 882, 982, 1620, 1781
BtgZI	GCGATG	1 cut(s)	674
BtsCI	GGATG	3 cut(s)	331, 784, 1597
BtsI	GCAGTG	1 cut(s)	1325
BtsIMutI	CAGTG	7 cut(s)	138, 719, 1083, 1124, 1325, 1551, 1657
Cac8I	GCNNGC	3 cut(s)	281, 766, 970
CaiI	CAGNNNCTG	5 cut(s)	674, 1342, 1460, 1553, 1697
CfoI	GCGC	1 cut(s)	198
Cfr13I	GGNCC	3 cut(s)	235, 980, 1073
Csp6I	GTAC	3 cut(s)	16, 782, 1666
CspCI	CAANNNNNGTGG	2 cut(s)	1351, 1386
CviAII	CATG	5 cut(s)	793, 1033, 1160, 1238, 1759
CviQI	GTAC	3 cut(s)	16, 782, 1666
DdeI	CTNAG	5 cut(s)	180, 623, 1038, 1049, 1554
DraI	TTTAAA	2 cut(s)	643, 1308
EaeI	YGGCCR	2 cut(s)	880, 1618
Eam1104I	CTCTTC	5 cut(s)	89, 101, 152, 439, 495
EarI	CTCTTC	5 cut(s)	89, 101, 152, 439, 495
Eco147I	AGGCCT	1 cut(s)	514
Eco31I	GGTCTC	1 cut(s)	555
Eco47I	GGWCC	2 cut(s)	235, 1073
Eco57I	CTGAAG	2 cut(s)	743, 1550
EcoRI	GAATTC	2 cut(s)	749, 802
EcoRII	CCWGG	2 cut(s)	24, 1390
EcoT22I	ATGCAT	1 cut(s)	1719
FaeI	CATG	5 cut(s)	796, 1036, 1163, 1241, 1762
FaqI	GGGAC	1 cut(s)	248
FatI	CATG	5 cut(s)	792, 1032, 1159, 1237, 1758
FauI	CCCGC	4 cut(s)	48, 757, 1366, 1726
FauNDI	CATATG	1 cut(s)	985
FbaI	TGATCA	1 cut(s)	789
FblI	GTMKAC	2 cut(s)	1522, 1578
FokI	GGATG	3 cut(s)	338, 791, 1604
FspBI	CTAG	4 cut(s)	471, 807, 1154, 1320
GlaI	GCGC	1 cut(s)	197
GsaI	CCCAGC	1 cut(s)	1515
GsuI	CTGGAG	2 cut(s)	47, 1278
HaeIII	GGCC	5 cut(s)	514, 882, 982, 1620, 1781
HapII	CCGG	2 cut(s)	680, 1621
HhaI	GCGC	1 cut(s)	198
Hin1II	CATG	5 cut(s)	796, 1036, 1163, 1241, 1762
Hin6I	GCGC	1 cut(s)	196
HinP1I	GCGC	1 cut(s)	196
HincII	GTYRAC	1 cut(s)	118
HindII	GTYRAC	1 cut(s)	118
HinfI	GANTC	2 cut(s)	934, 1042
HpaII	CCGG	2 cut(s)	680, 1621
HphI	GGTGA	4 cut(s)	784, 922, 1037, 1636
Hpy166II	GTNNAC	6 cut(s)	118, 1523, 1579, 1642, 1666, 1774
Hpy188I	TCNGA	6 cut(s)	63, 219, 493, 574, 693, 922
Hpy188III	TCNNGA	7 cut(s)	269, 680, 807, 1106, 1154, 1250, 1320
Hpy8I	GTNNAC	6 cut(s)	118, 1523, 1579, 1642, 1666, 1774
Hpy99I	CGWCG	4 cut(s)	14, 53, 125, 128
HpyAV	CCTTC	9 cut(s)	73, 77, 196, 219, 316, 385, 718, 927, 1731
HpyCH4III	ACNGT	6 cut(s)	37, 700, 813, 1008, 1119, 1652
HpyCH4IV	ACGT	3 cut(s)	126, 1430, 1708
HpyF3I	CTNAG	5 cut(s)	180, 623, 1038, 1049, 1554
HpySE526I	ACGT	3 cut(s)	126, 1430, 1708
Hsp92II	CATG	5 cut(s)	796, 1036, 1163, 1241, 1762
HspAI	GCGC	1 cut(s)	196
Kpn2I	TCCGGA	1 cut(s)	679
Ksp22I	TGATCA	1 cut(s)	789
LguI	GCTCTTC	2 cut(s)	89, 152
LweI	GCATC	3 cut(s)	316, 705, 835
MaeI	CTAG	4 cut(s)	471, 807, 1154, 1320
MaeII	ACGT	3 cut(s)	126, 1430, 1708
MaeIII	GTNAC	3 cut(s)	527, 1228, 1426
MbiI	CCGCTC	5 cut(s)	55, 358, 489, 547, 570
MflI	RGATCY	2 cut(s)	58, 1244
MhlI	GDGCHC	2 cut(s)	186, 1327
MlsI	TGGCCA	1 cut(s)	882
MluCI	AATT	4 cut(s)	594, 749, 802, 1142
MluNI	TGGCCA	1 cut(s)	882
MlyI	GAGTC	1 cut(s)	1036
MmeI	TCCRAC	5 cut(s)	516, 972, 1173, 1222, 1483
Mox20I	TGGCCA	1 cut(s)	882
Mph1103I	ATGCAT	1 cut(s)	1719
MroI	TCCGGA	1 cut(s)	679
MroXI	GAANNNNTTC	1 cut(s)	1538
MscI	TGGCCA	1 cut(s)	882
MseI	TTAA	5 cut(s)	642, 1029, 1307, 1584, 1795
MslI	CAYNNNNRTG	1 cut(s)	1635
Msp20I	TGGCCA	1 cut(s)	882
MspA1I	CMGCKG	2 cut(s)	731, 1694
MspI	CCGG	2 cut(s)	680, 1621
MspR9I	CCNGG	3 cut(s)	26, 1392, 1622
MvaI	CCWGG	2 cut(s)	26, 1392
MvnI	CGCG	3 cut(s)	198, 276, 498
NciI	CCSGG	1 cut(s)	1622
NdeI	CATATG	1 cut(s)	985
NlaIII	CATG	5 cut(s)	796, 1036, 1163, 1241, 1762
NlaIV	GGNNCC	7 cut(s)	60, 88, 212, 236, 566, 666, 1563
NmuCI	GTSAC	1 cut(s)	527
NsiI	ATGCAT	1 cut(s)	1719
NspI	RCATGY	1 cut(s)	1163
PceI	AGGCCT	1 cut(s)	514
PciSI	GCTCTTC	2 cut(s)	89, 152
PcsI	WCGNNNNNNNCGW	2 cut(s)	15, 280
PdmI	GAANNNNTTC	1 cut(s)	1538
PfeI	GAWTC	1 cut(s)	934
PleI	GAGTC	1 cut(s)	1036
PpsI	GAGTC	1 cut(s)	1036
Psp6I	CCWGG	2 cut(s)	24, 1390
PspFI	CCCAGC	1 cut(s)	1511
PspGI	CCWGG	2 cut(s)	24, 1390
PspN4I	GGNNCC	7 cut(s)	60, 88, 212, 236, 566, 666, 1563
PspPI	GGNCC	3 cut(s)	235, 980, 1073
PsrI	GAACNNNNNNTAC	2 cut(s)	821, 853
PstI	CTGCAG	4 cut(s)	970, 1273, 1456, 1702
PstNI	CAGNNNCTG	5 cut(s)	674, 1342, 1460, 1553, 1697
PsuI	RGATCY	2 cut(s)	58, 1244
PvuII	CAGCTG	2 cut(s)	731, 1694
RsaI	GTAC	3 cut(s)	17, 783, 1667
RsaNI	GTAC	3 cut(s)	16, 782, 1666
RseI	CAYNNNNRTG	1 cut(s)	1635
SapI	GCTCTTC	2 cut(s)	89, 152
SaqAI	TTAA	5 cut(s)	642, 1029, 1307, 1584, 1795
Sau96I	GGNCC	3 cut(s)	235, 980, 1073
SchI	GAGTC	1 cut(s)	1036
ScrFI	CCNGG	3 cut(s)	26, 1392, 1622
SduI	GDGCHC	2 cut(s)	186, 1327
SfaNI	GCATC	3 cut(s)	316, 705, 835
SfcI	CTRYAG	6 cut(s)	100, 867, 966, 1269, 1452, 1698
SinI	GGWCC	2 cut(s)	235, 1073
SmiMI	CAYNNNNRTG	1 cut(s)	1635
SmlI	CTYRAG	3 cut(s)	617, 1106, 1248
SmoI	CTYRAG	3 cut(s)	617, 1106, 1248
Sse9I	AATT	4 cut(s)	594, 749, 802, 1142
SseBI	AGGCCT	1 cut(s)	514
SspMI	CTAG	4 cut(s)	471, 807, 1154, 1320
StuI	AGGCCT	1 cut(s)	514
StyD4I	CCNGG	3 cut(s)	24, 1390, 1620
TaaI	ACNGT	6 cut(s)	37, 700, 813, 1008, 1119, 1652
TaiI	ACGT	3 cut(s)	129, 1433, 1711
TaqI	TCGA	5 cut(s)	9, 815, 1207, 1542, 1596
TaqII	GACCGA	2 cut(s)	252, 546
TasI	AATT	4 cut(s)	594, 749, 802, 1142
TatI	WGTACW	1 cut(s)	1665
TauI	GCSGC	4 cut(s)	141, 279, 489, 570
TfiI	GAWTC	1 cut(s)	934
Tru1I	TTAA	5 cut(s)	642, 1029, 1307, 1584, 1795
Tru9I	TTAA	5 cut(s)	642, 1029, 1307, 1584, 1795
TscAI	CASTG	7 cut(s)	138, 726, 1083, 1124, 1332, 1558, 1657
TseFI	GTSAC	1 cut(s)	527
Tsp45I	GTSAC	1 cut(s)	527
TspDTI	ATGAA	4 cut(s)	762, 1212, 1509, 1747
TspRI	CASTG	7 cut(s)	138, 726, 1083, 1124, 1332, 1558, 1657
VpaK11BI	GGWCC	2 cut(s)	235, 1073
XapI	RAATTY	2 cut(s)	749, 802
XbaI	TCTAGA	3 cut(s)	806, 1153, 1319
XceI	RCATGY	1 cut(s)	1163
XmiI	GTMKAC	2 cut(s)	1522, 1578
XmnI	GAANNNNTTC	1 cut(s)	1538
XspI	CTAG	4 cut(s)	471, 807, 1154, 1320
Zsp2I	ATGCAT	1 cut(s)	1719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.