Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0008267

Physical Location & Seq

Genomic Coordinates Reverse (-)

2741062 .. 2751120

Gene Structure 10059 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g03620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGACTTCGACGAGTACGATTATCTGGAGAAGACTGTGCAGGAGAACGACGACCGTGACTCCAAGCAGAAAACGAGCAAGAAAGGGACCGAGAAGAGCTACAGGAAGAGAGAGTTTGGCGACGACCTTTCGGTGGGCGGTGAAAAGGACGAAAGGAAGAGCAGTAAGAGGTCAAAGGCGGAGCACGAGAACGGGCGAGAGAAGGATCGGCACCATCGAAGTGGGAGGGAGAGAGACCGGGACAGTGAAAGGGATAAGAACCACGGTCGTGATCGCGAGAGGGAGAGAGACAGAGAGAGGAGTAGCAGAGAGAAGGACAGGGTCAAGGAGAAGGAGAAGGACAAGGAGAGAGAAAAAGAGCGGAGGGAGAGGGATAAGGAGAGGGAAAGAGAGAAGGAAAGAGAGAAGGAAAGGGAAAGAGAGAGGAGAGATAGGAGAGAGAGGGAGGACAGAGAGAGAAGAGAGAAAGAGGAGAATGAGAGGTCTCGGAGGAGTGTGAGTCGCTCCGACCGCGAAGAGAAAGAGAGGCCTCGCAGGAGTAGTGACCGAGAAGAGAGAGAGCGATCTCGCAGAAGTAGGAGCCGCTCTGAACGCGATAGGGAGAGGGAAATTAGAGAAAGAGATCGAGAGCTTGAGTTGAGGGAGAGCAGGAGGTTTAAGGACAAAAAGGAAGCGGTGGAGCCGGAAGCTGATCCAGAAAGGGATCAGAGAACTGTTTTTGCCTACCAGATGCCACTGAAGGCAACTGAACGAGATGTTTATGAATTCTTCTCAAAAGCGGGCAAGGTGAGGGATGTACGCCTGATCATGGACAGGAATTCTAGACGGTCAAAGGGAGTTGGGTATATTGAGTTCTATGATGCAATGTCTGTGCCAATGGCTATAGCTCTTTCTGGCCAACTACTTCTGGGGCAACCTGTAATGGTGAAACCTTCTGAGGCTGAAAAGAATCTTGTTCAGTCCAACACGAGTGGGGCTGCAGGTGTTGTAGGGCCATATGGTGCGGTTGATAGGAAACTGTATGTGGGGAACTTGCATTTTAACATGACTGAGACTCACCTTAGAGAGATTTTTGAACCGTTTGGACCAGTGGAGCTTGTGCAACTTCCCCTTGATCTTGAGACAGGACAGTGCAAGGGTTTTGGCTTTGTTCAATTTGCTCATCTAGAACATGCAAAGGCTGCTCAAAGTTTGAATGGAAAGTTGGAGATTGCTGGTCGAACTATCAAGGTTTCATCTGTTACAGATCATGTTGGATCTCAAGATGCTGGAGCAAAATCTGCAGACTTTGATGATGATGATGGGGGTGGTTTGTCTTTAAATGCCCAATCTAGAGCACTGCTAATGCAGAAGCTGGATCGCACTGGTATTGCCACAAGTGTTGTGGGCTCTCTTGGAGTTCCTGCGCTGAATGGGGCAGCTCCTAATCAACTAGCTGTTGTGTTGCCAATCAATGGTCAAGCTGCAGTCTCTGCTCCTATTCTTCCAGCAGCAGTTGCAGTCAATGAACCTGTTGGAAACCCCAGCGAATGTCTACTACTGAAAAATATGTTCGATCCAGCCACTGAGAGGGAGCCAGATTTTGATATAGACATTAAAGAGGATGTTGAAGAAGAATGTTCGAAATATGGCCAGGTGAAGCATATTTATGTGGACAAAAACAGTGCTGGTTTTGTGTATTTGCGGTTTGAAACTGTGGAAGCAGCAGCCGGAGCTCAACATGCAATGCATTTGAGATGGTTTGCAAGGAGGCTGATTTCAGCCCTGTTCATGCAACCTCAAGTTTACGAGGCCAAGTTTGGAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005815 GO:0005856 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010556 GO:0010557 GO:0010604 GO:0015630 GO:0016070 GO:0016604 GO:0016607 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044464 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

603

Amino Acids

69.52

Weight (kDa)

7.7

Isoelectric Point (pI)

51.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	244 - 306	6.3e-11	RNA recognition motif
RRM_1	PF00076	340 - 410	4.4e-20	RNA recognition motif
RBM39linker	PF15519	430 - 528	5.3e-21	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09880
fragaria_vesca	FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920 FvH4_1g23920
malus_domestica	MD01G1009900.v1.1 MD15G1339600.v1.1
prunus_persica	Prupe.6G161000_v2.0.a1
pyrus_communis	pycom01g03620 pycom15g29960
rosa_chinensis	RchiOBHm_Chr2g0119921
rosa_laevigata	RLG00000018502
rosa_multiflora	Rmu_sc0001501.1_g000003
rosa_roxburghii	Rroxscaffold_2G00123990
rosa_rugosa	Rorug02G0225300 Rorug02G0225400
rosa_samantha	Rh2AG282500 Rh2BG293900 Rh2DG307700
rosa_wichuraiana	Rw2G022550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	971
Acc36I	ACCTGC	1 cut(s)	971
AccB1I	GGYRCC	1 cut(s)	210
AccB7I	CCANNNNNTGG	1 cut(s)	1454
AccBSI	CCGCTC	2 cut(s)	361, 585
AccI	GTMKAC	1 cut(s)	1534
AccII	CGCG	3 cut(s)	276, 513, 594
AciI	CCGC	9 cut(s)	138, 179, 361, 511, 583, 674, 779, 1004, 1684
AclWI	GGATC	6 cut(s)	213, 686, 711, 1264, 1365, 1550
AcoI	YGGCCR	2 cut(s)	895, 1630
AcsI	RAATTY	2 cut(s)	764, 817
AcuI	CTGAAG	1 cut(s)	758
AfaI	GTAC	2 cut(s)	17, 798
AfiI	CCNNNNNNNGG	4 cut(s)	133, 808, 1454, 1569
AgsI	TTSAA	5 cut(s)	1076, 1154, 1195, 1610, 1691
AjnI	CCWGG	1 cut(s)	1632
AjuI	GAANNNNNNNTTGG	2 cut(s)	1187, 1219
AleI	CACNNNNGTG	1 cut(s)	267
Alw21I	GWGCWC	3 cut(s)	186, 1339, 1717
Alw26I	GTCTC	6 cut(s)	228, 282, 489, 1046, 1115, 1474
AlwI	GGATC	6 cut(s)	213, 686, 711, 1264, 1365, 1550
AlwNI	CAGNNNCTG	3 cut(s)	1354, 1472, 1565
AoxI	GGCC	5 cut(s)	527, 895, 992, 1630, 1791
ApeKI	GCWGC	7 cut(s)	977, 1181, 1418, 1463, 1490, 1703, 1706
ApoI	RAATTY	2 cut(s)	764, 817
AspLEI	GCGC	1 cut(s)	1408
AspS9I	GGNCC	3 cut(s)	87, 992, 1085
AsuC2I	CCSGG	1 cut(s)	239
AsuHPI	GGTGA	5 cut(s)	152, 799, 937, 1049, 1648
AsuII	TTCGAA	1 cut(s)	1622
AvaII	GGWCC	2 cut(s)	87, 1085
BalI	TGGCCA	2 cut(s)	897, 1632
BanI	GGYRCC	1 cut(s)	210
BanII	GRGCYC	2 cut(s)	1391, 1717
BauI	CACGAG	2 cut(s)	185, 967
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	3 cut(s)	186, 1339, 1717
BbvI	GCAGC	7 cut(s)	964, 1168, 1430, 1450, 1502, 1715, 1718
BccI	CCATC	3 cut(s)	222, 1295, 1731
BciT130I	CCWGG	1 cut(s)	1634
BclI	TGATCA	1 cut(s)	804
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	6 cut(s)	228, 282, 489, 1046, 1115, 1474
BfaI	CTAG	4 cut(s)	822, 1166, 1332, 1433
BfmI	CTRYAG	5 cut(s)	100, 882, 978, 1281, 1464
BfuAI	ACCTGC	1 cut(s)	971
BisI	GCNGC	8 cut(s)	583, 978, 1182, 1419, 1464, 1491, 1704, 1707
BlsI	GCNGC	8 cut(s)	584, 979, 1183, 1420, 1465, 1492, 1705, 1708
Bme1390I	CCNGG	2 cut(s)	239, 1634
Bme18I	GGWCC	2 cut(s)	87, 1085
BmgT120I	GGNCC	3 cut(s)	87, 992, 1085
BmiI	GGNNCC	5 cut(s)	88, 212, 581, 681, 1575
BmrFI	CCNGG	2 cut(s)	239, 1634
BmsI	GCATC	3 cut(s)	720, 850, 1255
BpiI	GAAGAC	1 cut(s)	38
BpmI	CTGGAG	2 cut(s)	47, 1290
Bpu14I	TTCGAA	1 cut(s)	1622
BpuEI	CTTGAG	4 cut(s)	653, 1139, 1245, 1764
BpuMI	CCSGG	1 cut(s)	239
BsaI	GGTCTC	2 cut(s)	228, 489
BsaJI	CCNNGG	1 cut(s)	262
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 484, 514
Bsc4I	CCNNNNNNNGG	4 cut(s)	133, 808, 1454, 1569
Bse1I	ACTGG	2 cut(s)	1088, 1369
Bse3DI	GCAATG	2 cut(s)	870, 1731
BseBI	CCWGG	1 cut(s)	1634
BseDI	CCNNGG	1 cut(s)	262
BseGI	GGATG	2 cut(s)	799, 1609
BseLI	CCNNNNNNNGG	4 cut(s)	133, 808, 1454, 1569
BseMI	GCAATG	2 cut(s)	870, 1731
BseMII	CTCAG	3 cut(s)	927, 1041, 1557
BseNI	ACTGG	2 cut(s)	1088, 1369
BseRI	GAGGAG	4 cut(s)	313, 439, 485, 505
BseXI	GCAGC	7 cut(s)	964, 1168, 1430, 1450, 1502, 1715, 1718
BseYI	CCCAGC	1 cut(s)	1523
BsgI	GTGCAG	1 cut(s)	59
Bsh1236I	CGCG	3 cut(s)	276, 513, 594
Bsh1285I	CGRYCG	3 cut(s)	55, 268, 511
BshFI	GGCC	5 cut(s)	529, 897, 994, 1632, 1793
BshNI	GGYRCC	1 cut(s)	210
BsiEI	CGRYCG	3 cut(s)	55, 268, 511
BsiHKAI	GWGCWC	3 cut(s)	186, 1339, 1717
BsiSI	CCGG	3 cut(s)	238, 683, 1710
BslFI	GGGAC	2 cut(s)	100, 254
BslI	CCNNNNNNNGG	4 cut(s)	133, 808, 1454, 1569
BsmAI	GTCTC	6 cut(s)	228, 282, 489, 1046, 1115, 1474
BsmFI	GGGAC	2 cut(s)	100, 254
BsnI	GGCC	5 cut(s)	529, 897, 994, 1632, 1793
Bso31I	GGTCTC	2 cut(s)	228, 489
Bsp119I	TTCGAA	1 cut(s)	1622
Bsp1286I	GDGCHC	4 cut(s)	186, 1339, 1391, 1717
Bsp68I	TCGCGA	1 cut(s)	276
BspACI	CCGC	9 cut(s)	138, 179, 361, 511, 583, 674, 779, 1004, 1684
BspANI	GGCC	5 cut(s)	529, 897, 994, 1632, 1793
BspCNI	CTCAG	3 cut(s)	928, 1042, 1558
BspFNI	CGCG	3 cut(s)	276, 513, 594
BspLI	GGNNCC	5 cut(s)	88, 212, 581, 681, 1575
BspMAI	CTGCAG	3 cut(s)	982, 1285, 1468
BspMI	ACCTGC	1 cut(s)	971
BspPI	GGATC	6 cut(s)	213, 686, 711, 1264, 1365, 1550
BspQI	GCTCTTC	2 cut(s)	89, 152
BspT104I	TTCGAA	1 cut(s)	1622
BspT107I	GGYRCC	1 cut(s)	210
BspTNI	GGTCTC	2 cut(s)	228, 489
BsrBI	CCGCTC	2 cut(s)	361, 585
BsrDI	GCAATG	2 cut(s)	870, 1731
BsrI	ACTGG	2 cut(s)	1088, 1369
BssECI	CCNNGG	1 cut(s)	262
BssSI	CACGAG	2 cut(s)	185, 967
Bst2BI	CACGAG	2 cut(s)	185, 967
Bst2UI	CCWGG	1 cut(s)	1634
Bst6I	CTCTTC	6 cut(s)	89, 101, 152, 454, 510, 546
BstAPI	GCANNNNNTGC	4 cut(s)	1181, 1280, 1472, 1496
BstBI	TTCGAA	1 cut(s)	1622
BstC8I	GCNNGC	1 cut(s)	781
BstDEI	CTNAG	4 cut(s)	936, 1050, 1061, 1566
BstDSI	CCRYGG	1 cut(s)	262
BstF5I	GGATG	2 cut(s)	799, 1609
BstFNI	CGCG	3 cut(s)	276, 513, 594
BstHHI	GCGC	1 cut(s)	1408
BstMAI	GTCTC	6 cut(s)	228, 282, 489, 1046, 1115, 1474
BstMCI	CGRYCG	3 cut(s)	55, 268, 511
BstMWI	GCNNNNNNNGC	8 cut(s)	510, 591, 1181, 1280, 1472, 1496, 1712, 1721
BstNI	CCWGG	1 cut(s)	1634
BstNSI	RCATGY	2 cut(s)	1175, 1724
BstSCI	CCNGG	2 cut(s)	237, 1632
BstSFI	CTRYAG	5 cut(s)	100, 882, 978, 1281, 1464
BstUI	CGCG	3 cut(s)	276, 513, 594
BstV1I	GCAGC	7 cut(s)	964, 1168, 1430, 1450, 1502, 1715, 1718
BstV2I	GAAGAC	1 cut(s)	38
BstX2I	RGATCY	1 cut(s)	1256
BstXI	CCANNNNNNTGG	1 cut(s)	221
BstYI	RGATCY	1 cut(s)	1256
BsuRI	GGCC	5 cut(s)	529, 897, 994, 1632, 1793
BtgI	CCRYGG	1 cut(s)	262
BtsCI	GGATG	2 cut(s)	799, 1609
BtsI	GCAGTG	1 cut(s)	1337
BtsIMutI	CAGTG	8 cut(s)	250, 734, 1095, 1136, 1337, 1362, 1563, 1669
BtuMI	TCGCGA	1 cut(s)	276
BveI	ACCTGC	1 cut(s)	971
Cac8I	GCNNGC	1 cut(s)	781
CaiI	CAGNNNCTG	3 cut(s)	1354, 1472, 1565
CfoI	GCGC	1 cut(s)	1408
Cfr13I	GGNCC	3 cut(s)	87, 992, 1085
Csp6I	GTAC	2 cut(s)	16, 797
CspCI	CAANNNNNGTGG	6 cut(s)	952, 987, 1363, 1365, 1398, 1400
CviAII	CATG	6 cut(s)	808, 1045, 1172, 1250, 1721, 1771
CviQI	GTAC	2 cut(s)	16, 797
DdeI	CTNAG	4 cut(s)	936, 1050, 1061, 1566
DraI	TTTAAA	1 cut(s)	1320
EaeI	YGGCCR	2 cut(s)	895, 1630
Eam1104I	CTCTTC	6 cut(s)	89, 101, 152, 454, 510, 546
EarI	CTCTTC	6 cut(s)	89, 101, 152, 454, 510, 546
EciI	GGCGGA	1 cut(s)	194
Ecl136II	GAGCTC	1 cut(s)	1715
Eco147I	AGGCCT	1 cut(s)	529
Eco24I	GRGCYC	2 cut(s)	1391, 1717
Eco31I	GGTCTC	2 cut(s)	228, 489
Eco47I	GGWCC	2 cut(s)	87, 1085
Eco53kI	GAGCTC	1 cut(s)	1715
Eco57I	CTGAAG	1 cut(s)	758
EcoICRI	GAGCTC	1 cut(s)	1715
EcoRI	GAATTC	2 cut(s)	764, 817
EcoRII	CCWGG	1 cut(s)	1632
EcoT22I	ATGCAT	1 cut(s)	1731
EcoT38I	GRGCYC	2 cut(s)	1391, 1717
FaeI	CATG	6 cut(s)	811, 1048, 1175, 1253, 1724, 1774
FaqI	GGGAC	2 cut(s)	100, 254
FatI	CATG	6 cut(s)	807, 1044, 1171, 1249, 1720, 1770
FauI	CCCGC	1 cut(s)	772
FauNDI	CATATG	1 cut(s)	997
FbaI	TGATCA	1 cut(s)	804
FblI	GTMKAC	1 cut(s)	1534
Fnu4HI	GCNGC	8 cut(s)	583, 978, 1182, 1419, 1464, 1491, 1704, 1707
FokI	GGATG	2 cut(s)	806, 1616
FriOI	GRGCYC	2 cut(s)	1391, 1717
Fsp4HI	GCNGC	8 cut(s)	583, 978, 1182, 1419, 1464, 1491, 1704, 1707
FspBI	CTAG	4 cut(s)	822, 1166, 1332, 1433
GlaI	GCGC	1 cut(s)	1407
GluI	GCNGC	8 cut(s)	583, 978, 1182, 1419, 1464, 1491, 1704, 1707
GsaI	CCCAGC	1 cut(s)	1527
GsuI	CTGGAG	2 cut(s)	47, 1290
HaeIII	GGCC	5 cut(s)	529, 897, 994, 1632, 1793
HapII	CCGG	3 cut(s)	238, 683, 1710
HhaI	GCGC	1 cut(s)	1408
Hin1II	CATG	6 cut(s)	811, 1048, 1175, 1253, 1724, 1774
Hin6I	GCGC	1 cut(s)	1406
HinP1I	GCGC	1 cut(s)	1406
HinfI	GANTC	4 cut(s)	59, 499, 949, 1054
HpaII	CCGG	3 cut(s)	238, 683, 1710
HphI	GGTGA	5 cut(s)	152, 799, 937, 1049, 1648
Hpy166II	GTNNAC	3 cut(s)	1535, 1654, 1786
Hpy188I	TCNGA	5 cut(s)	489, 508, 589, 708, 937
Hpy8I	GTNNAC	3 cut(s)	1535, 1654, 1786
Hpy99I	CGWCG	3 cut(s)	14, 53, 125
HpyAV	CCTTC	8 cut(s)	196, 307, 325, 331, 388, 400, 733, 942
HpyF10VI	GCNNNNNNNGC	8 cut(s)	510, 591, 1181, 1280, 1472, 1496, 1712, 1721
HpyF3I	CTNAG	4 cut(s)	936, 1050, 1061, 1566
Hsp92II	CATG	6 cut(s)	811, 1048, 1175, 1253, 1724, 1774
HspAI	GCGC	1 cut(s)	1406
Ksp22I	TGATCA	1 cut(s)	804
LguI	GCTCTTC	2 cut(s)	89, 152
Lsp1109I	GCAGC	7 cut(s)	964, 1168, 1430, 1450, 1502, 1715, 1718
LweI	GCATC	3 cut(s)	720, 850, 1255
MaeI	CTAG	4 cut(s)	822, 1166, 1332, 1433
MaeIII	GTNAC	3 cut(s)	56, 542, 1240
MbiI	CCGCTC	2 cut(s)	361, 585
MflI	RGATCY	1 cut(s)	1256
MhlI	GDGCHC	4 cut(s)	186, 1339, 1391, 1717
MlsI	TGGCCA	2 cut(s)	897, 1632
MluCI	AATT	4 cut(s)	609, 764, 817, 1154
MluNI	TGGCCA	2 cut(s)	897, 1632
MlyI	GAGTC	3 cut(s)	53, 508, 1048
MmeI	TCCRAC	5 cut(s)	531, 987, 1185, 1234, 1495
Mox20I	TGGCCA	2 cut(s)	897, 1632
Mph1103I	ATGCAT	1 cut(s)	1731
MscI	TGGCCA	2 cut(s)	897, 1632
MseI	TTAA	5 cut(s)	657, 1041, 1319, 1596, 1807
MslI	CAYNNNNRTG	3 cut(s)	219, 267, 1647
Msp20I	TGGCCA	2 cut(s)	897, 1632
MspI	CCGG	3 cut(s)	238, 683, 1710
MspR9I	CCNGG	2 cut(s)	239, 1634
MvaI	CCWGG	1 cut(s)	1634
MvnI	CGCG	3 cut(s)	276, 513, 594
MwoI	GCNNNNNNNGC	8 cut(s)	510, 591, 1181, 1280, 1472, 1496, 1712, 1721
NciI	CCSGG	1 cut(s)	239
NdeI	CATATG	1 cut(s)	997
NlaIII	CATG	6 cut(s)	811, 1048, 1175, 1253, 1724, 1774
NlaIV	GGNNCC	5 cut(s)	88, 212, 581, 681, 1575
NmuCI	GTSAC	2 cut(s)	56, 542
NruI	TCGCGA	1 cut(s)	276
NsiI	ATGCAT	1 cut(s)	1731
NspI	RCATGY	2 cut(s)	1175, 1724
NspV	TTCGAA	1 cut(s)	1622
OliI	CACNNNNGTG	1 cut(s)	267
PaqCI	CACCTGC	1 cut(s)	971
PceI	AGGCCT	1 cut(s)	529
PciSI	GCTCTTC	2 cut(s)	89, 152
PcsI	WCGNNNNNNNCGW	2 cut(s)	15, 214
PfeI	GAWTC	1 cut(s)	949
PflFI	GACNNNGTC	1 cut(s)	320
PflMI	CCANNNNNTGG	1 cut(s)	1454
PkrI	GCNGC	8 cut(s)	584, 979, 1183, 1420, 1465, 1492, 1705, 1708
PleI	GAGTC	3 cut(s)	53, 507, 1048
PpsI	GAGTC	3 cut(s)	53, 507, 1048
Psp124BI	GAGCTC	1 cut(s)	1717
Psp6I	CCWGG	1 cut(s)	1632
PspFI	CCCAGC	1 cut(s)	1523
PspGI	CCWGG	1 cut(s)	1632
PspN4I	GGNNCC	5 cut(s)	88, 212, 581, 681, 1575
PspPI	GGNCC	3 cut(s)	87, 992, 1085
PsrI	GAACNNNNNNTAC	2 cut(s)	836, 868
PstI	CTGCAG	3 cut(s)	982, 1285, 1468
PstNI	CAGNNNCTG	3 cut(s)	1354, 1472, 1565
PsuI	RGATCY	1 cut(s)	1256
PsyI	GACNNNGTC	1 cut(s)	320
RruI	TCGCGA	1 cut(s)	276
RsaI	GTAC	2 cut(s)	17, 798
RsaNI	GTAC	2 cut(s)	16, 797
RseI	CAYNNNNRTG	3 cut(s)	219, 267, 1647
SacI	GAGCTC	1 cut(s)	1717
SapI	GCTCTTC	2 cut(s)	89, 152
SaqAI	TTAA	5 cut(s)	657, 1041, 1319, 1596, 1807
SatI	GCNGC	8 cut(s)	583, 978, 1182, 1419, 1464, 1491, 1704, 1707
Sau96I	GGNCC	3 cut(s)	87, 992, 1085
SchI	GAGTC	3 cut(s)	53, 508, 1048
ScrFI	CCNGG	2 cut(s)	239, 1634
SduI	GDGCHC	4 cut(s)	186, 1339, 1391, 1717
SfaNI	GCATC	3 cut(s)	720, 850, 1255
SfcI	CTRYAG	5 cut(s)	100, 882, 978, 1281, 1464
SfuI	TTCGAA	1 cut(s)	1622
SinI	GGWCC	2 cut(s)	87, 1085
SmiMI	CAYNNNNRTG	3 cut(s)	219, 267, 1647
SmlI	CTYRAG	4 cut(s)	632, 1118, 1260, 1779
SmoI	CTYRAG	4 cut(s)	632, 1118, 1260, 1779
Sse9I	AATT	4 cut(s)	609, 764, 817, 1154
SseBI	AGGCCT	1 cut(s)	529
SsiI	CCGC	9 cut(s)	138, 179, 361, 511, 583, 674, 779, 1004, 1684
SspMI	CTAG	4 cut(s)	822, 1166, 1332, 1433
SstI	GAGCTC	1 cut(s)	1717
StuI	AGGCCT	1 cut(s)	529
StyD4I	CCNGG	2 cut(s)	237, 1632
TaqI	TCGA	6 cut(s)	9, 217, 625, 1219, 1554, 1622
TaqII	GACCGA	2 cut(s)	104, 561
TasI	AATT	4 cut(s)	609, 764, 817, 1154
TauI	GCSGC	1 cut(s)	585
TfiI	GAWTC	1 cut(s)	949
Tru1I	TTAA	5 cut(s)	657, 1041, 1319, 1596, 1807
Tru9I	TTAA	5 cut(s)	657, 1041, 1319, 1596, 1807
TscAI	CASTG	8 cut(s)	250, 741, 1095, 1136, 1344, 1369, 1570, 1669
TseFI	GTSAC	2 cut(s)	56, 542
TseI	GCWGC	7 cut(s)	977, 1181, 1418, 1463, 1490, 1703, 1706
Tsp45I	GTSAC	2 cut(s)	56, 542
TspDTI	ATGAA	4 cut(s)	777, 1224, 1521, 1759
TspRI	CASTG	8 cut(s)	250, 741, 1095, 1136, 1344, 1369, 1570, 1669
Tth111I	GACNNNGTC	1 cut(s)	320
Van91I	CCANNNNNTGG	1 cut(s)	1454
VpaK11BI	GGWCC	2 cut(s)	87, 1085
XapI	RAATTY	2 cut(s)	764, 817
XbaI	TCTAGA	3 cut(s)	821, 1165, 1331
XceI	RCATGY	2 cut(s)	1175, 1724
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1381
XmiI	GTMKAC	1 cut(s)	1534
XspI	CTAG	4 cut(s)	822, 1166, 1332, 1433
Zsp2I	ATGCAT	1 cut(s)	1731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.