AT5G11350

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005330
Physical Location & Seq
Forward (+)
3621454 .. 3625645
4192 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G11350.1

Sequence Viewer

Length: 2265 bp
ATGCGGCGTTCTCGTTTTGTTGCTCAAGTTTTCTCCGACGTTACCTTCGCTGACGCCTCCACTATCTCTGCTCCAATCTTCACCATGTCTACTCGTGCTCCGTACAGAGGTGCCCGAGGACGAGGACGAGGCCGAGGTGGGAGAAGTTTCTCCGATCGTCCGTACAATGATGACGCGGGAAGAGATCAGTTCGTTACTGGAGATTCTCATTTTCAATCAGTTCATGACGCCAATTTCCGATTCCGGCATGGTGAACCTTATCGACAACATCAGCCTCCGCTTGATCAGCGGCAGCAACCACCGTTCAATCAGAATTACGAATTTCGACCTCCGCCGCCGTCACGAGGTCAGTGGCAACAATTCCGTCAACCTAATCAGTTTCCGTCTAATCAAAACTACGCGGCTTGCCCTCCCCCTCCGTTCTATCAAAACCAGATGTCCCGGCCGCCTCCACAGCAGAGCTTTCGTCAACGGCCACGGTCAAAACCTTCAGATTACCGTGAATGGGAATATGCCAAAACGCCACCGTCTCCTGGCTCCGAAAAGTTTGTTGTTTTATCGTATAATATATTGGCGGATTACCTTGCAAATGATCACTGGAGAAGTCTTTACTTTCACATACCGAGGAATATGTTGAGTTGGGGATGGAGAAAGAGCAAATTAGTGTTCGAGCTTAGCCTATGGTCTGCAGATATAATGTGCCTTCAGGAAGTTGATAAATTTCAGGACTTAGAGGAGGAGATGAAGCACCGGGGATATAGTGCTATTTGGAAGATGCGGACTGGTAATGCTGTTGACGGATGTGCAATATTTTGGCGATCCAATAGATTCAAGTTGGTTCACGAGGAAAGCATCCAGTTCAATCAACTTGGTCTCCGAGATAACGTTGCTCAAATATGTGTGCTTGAGACATTGTTGACTTCACATACAAAAGAAAATGAGACCCCTCCACCTGAAAGCTCTGCTGGTTCCCATCGAGTTGTCATTTGTAACATTCACGTGCTTTTTAATCCTAAAAGAGGAGACTTTAAACTTGGTCAGGTCAGAACACTCTTAGATAAAGCTCATGCTGTTTCAAAACTCTGGGATGATGCGCCTATTGTTCTTTGTGGGGATTTCAATTGTACACCAAAGAGTCCTTTGTACAACTTTATTTCAGACCGGAAGTTGGATTTGTCTGGTTTGGCCAGAGACAAAGTTTCGGGGCAAGTTTCTGCTGAGTTTCGTCCACCAAGGCCAGAAAATTATACAACGAGGTATCAGTCCGCCAACAAATCTCCACAAGGTCAAGTTCAACCACCAAATTTGATCACAAATGCTCATATGGAGAATAACTCCAACATAGATGTTGGAACGGCCCCCTCCGAGAAGACATCTGAGCTTCCATGTGGTGATACAATTCTTGCTGGTCACGAAGCCACCTCCAGCTCTGACCAAGTATTACCATGCGAGAATATGGCCTCAGATTGTCAGTTTGGAATAGAAAACAGAAAACCTGATGATTCCGGGAATCTCTCGACAGCTGAAGATCTTTCTTCACTAACCATATCAGATACAGAACCTCAACATGCTTCCAGTGCTAGAGAAGATTTGAATACAGATCGTTCTGTAAGTTCCGGTTTATCAGAAACAGAGCAAACTCCTGAGGAAATATGTTCCAGTGATCAAGATATTTCATCTAGTCTCTCCACCAAGGTTGACACTTTTGTGGCTGAAATGAAACTAGATGGCTTAAAATTGGACGAACCAGTAGTATTCGCGCAAGATGAAGAAAGTTTAGGTGAAGATGGGGAAACCTTTTTGGCTAAGCTACACGATAACAATGAAAACTTGAGTCAAAAAGGGGAACTTGTGAGTGAAGTTCCACTTAAATGGAGTTCTGAAGCTTTAAATAGTGACAAAATCACTTATAGTCCATCCTCTTGGACTCCAATGGAGATAGCAACTGCAACTGGTGACCCAGAGAGAACTACGGTTGAACATGCTCTGGAGCTTAAAAGCACATACTCAGAAGTGGAGGGTCAAGCAAACACAAGGGATGAAAACGGAGAACCTGTAGTGACCAGTTATCACAGATGTTTCATGGGGACAGTTGACTACATATGGCGGTCGGAAGGTCTTCAAACAGTGCGTGTGCTTGCTCCAATACCAAAGCAAGCAATGCAGTGGACTCCAGGCTTCCCGACTCCTAAATGGGGAAGCGATCACATTGCACTGGTTTCAGAGTTGGCCTTCTGCAGCAGCAAAACTCTGCCCAAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exo_endo_phos

Protein Analysis

754

Amino Acids

84.92

Weight (kDa)

5.55

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 228 - 418 1.4e-12 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 110
AccI GTMKAC 1 cut(s) 89
AccII CGCG 3 cut(s) 176, 401, 1760
AclI AACGTT 1 cut(s) 885
AclWI GGATC 1 cut(s) 813
AcoI YGGCCR 3 cut(s) 443, 473, 1185
AcsI RAATTY 3 cut(s) 320, 719, 1303
AcuI CTGAAG 4 cut(s) 474, 689, 1545, 1902
AcvI CACGTG 1 cut(s) 1000
AcyI GRCGYC 2 cut(s) 54, 228
AfaI GTAC 4 cut(s) 104, 164, 1126, 1145
AfiI CCNNNNNNNGG 7 cut(s) 107, 344, 505, 533, 1019, 1168, 2195
AjnI CCWGG 2 cut(s) 532, 2173
AjuI GAANNNNNNNTTGG 2 cut(s) 224, 256
AleI CACNNNNGTG 1 cut(s) 1706
Alw21I GWGCWC 1 cut(s) 100
Alw26I GTCTC 7 cut(s) 534, 878, 902, 935, 1017, 1185, 1688
AlwI GGATC 1 cut(s) 813
Ama87I CYCGRG 1 cut(s) 114
AoxI GGCC 8 cut(s) 130, 443, 473, 1185, 1235, 1356, 1458, 2229
ApeKI GCWGC 3 cut(s) 292, 2238, 2241
ApoI RAATTY 3 cut(s) 320, 719, 1303
ArsI GACNNNNNNTTYG 2 cut(s) 29, 61
Asp700I GAANNNNTTC 1 cut(s) 2118
AspLEI GCGC 2 cut(s) 1096, 1762
AspS9I GGNCC 1 cut(s) 1357
AsuC2I CCSGG 3 cut(s) 442, 752, 1507
AsuHPI GGTGA 5 cut(s) 73, 263, 1403, 1793, 1967
AvaI CYCGRG 1 cut(s) 114
AxyI CCTNAGG 1 cut(s) 1644
BaeGI GKGCMC 1 cut(s) 115
BalI TGGCCA 1 cut(s) 1187
BanI GGYRCC 1 cut(s) 110
BauI CACGAG 3 cut(s) 93, 342, 842
BbrPI CACGTG 1 cut(s) 1000
BbsI GAAGAC 2 cut(s) 1376, 2111
Bbv12I GWGCWC 1 cut(s) 100
BbvI GCAGC 3 cut(s) 304, 2250, 2253
BccI CCATC 5 cut(s) 639, 981, 1721, 1781, 1924
BceAI ACGGC 3 cut(s) 322, 488, 1371
BcgI CGANNNNNNTGC 4 cut(s) 446, 480, 2192, 2226
BciT130I CCWGG 2 cut(s) 534, 2175
BclI TGATCA 4 cut(s) 283, 592, 1308, 1663
BcnI CCSGG 3 cut(s) 442, 752, 1507
BcoDI GTCTC 7 cut(s) 534, 878, 902, 935, 1017, 1185, 1688
BfaI CTAG 3 cut(s) 1581, 1680, 1724
BfmI CTRYAG 3 cut(s) 687, 2055, 2236
BglII AGATCT 1 cut(s) 1528
BisI GCNGC 8 cut(s) 5, 290, 293, 335, 402, 446, 2239, 2242
BlpI GCTNAGC 2 cut(s) 674, 1806
BlsI GCNGC 8 cut(s) 6, 291, 294, 336, 403, 447, 2240, 2243
Bme1390I CCNGG 5 cut(s) 442, 534, 752, 1507, 2175
BmeT110I CYCGRG 1 cut(s) 114
BmgT120I GGNCC 1 cut(s) 1357
BmiI GGNNCC 4 cut(s) 112, 538, 970, 1359
BmrFI CCNGG 5 cut(s) 442, 534, 752, 1507, 2175
BmsI GCATC 3 cut(s) 765, 861, 1081
BpiI GAAGAC 2 cut(s) 1376, 2111
BplI GAGNNNNNCTC 2 cut(s) 1319, 1351
BpmI CTGGAG 5 cut(s) 219, 619, 1408, 2009, 2157
Bpu1102I GCTNAGC 2 cut(s) 674, 1806
BpuEI CTTGAG 3 cut(s) 9, 926, 1852
BpuMI CCSGG 3 cut(s) 442, 752, 1507
BsaAI YACGTR 1 cut(s) 1000
BsaHI GRCGYC 2 cut(s) 54, 228
BsaI GGTCTC 2 cut(s) 878, 935
BsaJI CCNNGG 7 cut(s) 115, 133, 476, 623, 751, 1232, 1692
BsaWI WCCGGW 2 cut(s) 1161, 1616
BsaXI ACNNNNNCTCC 6 cut(s) 82, 112, 858, 888, 2040, 2070
Bsc4I CCNNNNNNNGG 7 cut(s) 107, 344, 505, 533, 1019, 1168, 2195
Bse21I CCTNAGG 1 cut(s) 1644
Bse3DI GCAATG 2 cut(s) 2166, 2208
BseBI CCWGG 2 cut(s) 534, 2175
BseDI CCNNGG 7 cut(s) 115, 133, 476, 623, 751, 1232, 1692
BseGI GGATG 6 cut(s) 650, 806, 852, 1093, 1916, 2044
BseLI CCNNNNNNNGG 7 cut(s) 107, 344, 505, 533, 1019, 1168, 2195
BseMI GCAATG 2 cut(s) 2166, 2208
BseMII CTCAG 5 cut(s) 1209, 1368, 1476, 1635, 2022
BseRI GAGGAG 3 cut(s) 749, 752, 1035
BseSI GKGCMC 1 cut(s) 115
BseX3I CGGCCG 1 cut(s) 443
BseXI GCAGC 3 cut(s) 304, 2250, 2253
Bsh1236I CGCG 3 cut(s) 176, 401, 1760
Bsh1285I CGRYCG 3 cut(s) 157, 446, 2111
BshFI GGCC 8 cut(s) 132, 445, 475, 1187, 1237, 1358, 1460, 2231
BshNI GGYRCC 1 cut(s) 110
BsiEI CGRYCG 3 cut(s) 157, 446, 2111
BsiHKAI GWGCWC 1 cut(s) 100
BsiHKCI CYCGRG 1 cut(s) 114
BsiSI CCGG 6 cut(s) 244, 442, 751, 1162, 1506, 1617
BslFI GGGAC 2 cut(s) 424, 2101
BslI CCNNNNNNNGG 7 cut(s) 107, 344, 505, 533, 1019, 1168, 2195
BsmAI GTCTC 7 cut(s) 534, 878, 902, 935, 1017, 1185, 1688
BsmBI CGTCTC 1 cut(s) 534
BsmFI GGGAC 2 cut(s) 424, 2101
BsnI GGCC 8 cut(s) 132, 445, 475, 1187, 1237, 1358, 1460, 2231
Bso31I GGTCTC 2 cut(s) 878, 935
BsoBI CYCGRG 1 cut(s) 114
Bsp1286I GDGCHC 2 cut(s) 100, 115
Bsp1407I TGTACA 2 cut(s) 1124, 1143
Bsp1720I GCTNAGC 2 cut(s) 674, 1806
BspANI GGCC 8 cut(s) 132, 445, 475, 1187, 1237, 1358, 1460, 2231
BspCNI CTCAG 5 cut(s) 1210, 1369, 1475, 1636, 2021
BspFNI CGCG 3 cut(s) 176, 401, 1760
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 4 cut(s) 112, 538, 970, 1359
BspMAI CTGCAG 2 cut(s) 691, 2240
BspPI GGATC 1 cut(s) 813
BspT107I GGYRCC 1 cut(s) 110
BspTNI GGTCTC 2 cut(s) 878, 935
BsrDI GCAATG 2 cut(s) 2166, 2208
BsrGI TGTACA 2 cut(s) 1124, 1143
BssECI CCNNGG 7 cut(s) 115, 133, 476, 623, 751, 1232, 1692
BssNI GRCGYC 2 cut(s) 54, 228
BssSI CACGAG 3 cut(s) 93, 342, 842
BssT1I CCWWGG 2 cut(s) 1232, 1692
Bst2BI CACGAG 3 cut(s) 93, 342, 842
Bst2UI CCWGG 2 cut(s) 534, 2175
Bst4CI ACNGT 7 cut(s) 303, 480, 500, 528, 1975, 2092, 2128
Bst6I CTCTTC 1 cut(s) 175
BstACI GRCGYC 2 cut(s) 54, 228
BstAPI GCANNNNNTGC 1 cut(s) 2161
BstAUI TGTACA 2 cut(s) 1124, 1143
BstBAI YACGTR 1 cut(s) 1000
BstC8I GCNNGC 3 cut(s) 406, 2139, 2157
BstDEI CTNAG 9 cut(s) 674, 730, 1054, 1218, 1377, 1462, 1644, 1806, 2008
BstDSI CCRYGG 1 cut(s) 476
BstEII GGTNACC 1 cut(s) 1955
BstENI CCTNNNNNAGG 1 cut(s) 1017
BstF5I GGATG 6 cut(s) 650, 806, 852, 1093, 1916, 2044
BstFNI CGCG 3 cut(s) 176, 401, 1760
BstHHI GCGC 2 cut(s) 1096, 1762
BstMAI GTCTC 7 cut(s) 534, 878, 902, 935, 1017, 1185, 1688
BstMCI CGRYCG 3 cut(s) 157, 446, 2111
BstMWI GCNNNNNNNGC 4 cut(s) 286, 454, 1577, 2161
BstNI CCWGG 2 cut(s) 534, 2175
BstNSI RCATGY 2 cut(s) 1571, 1985
BstPI GGTNACC 1 cut(s) 1955
BstSCI CCNGG 5 cut(s) 440, 532, 750, 1505, 2173
BstSFI CTRYAG 3 cut(s) 687, 2055, 2236
BstSLI GKGCMC 1 cut(s) 115
BstUI CGCG 3 cut(s) 176, 401, 1760
BstV1I GCAGC 3 cut(s) 304, 2250, 2253
BstV2I GAAGAC 2 cut(s) 1376, 2111
BstX2I RGATCY 1 cut(s) 1528
BstXI CCANNNNNNTGG 2 cut(s) 1872, 1923
BstYI RGATCY 1 cut(s) 1528
BstZI CGGCCG 1 cut(s) 443
Bsu36I CCTNAGG 1 cut(s) 1644
BsuRI GGCC 8 cut(s) 132, 445, 475, 1187, 1237, 1358, 1460, 2231
BtgI CCRYGG 1 cut(s) 476
BtsCI GGATG 6 cut(s) 650, 806, 852, 1093, 1916, 2044
BtsI GCAGTG 1 cut(s) 2171
BtsIMutI CAGTG 7 cut(s) 356, 595, 1582, 1666, 2133, 2171, 2213
Cac8I GCNNGC 3 cut(s) 406, 2139, 2157
CciI TCATGA 1 cut(s) 223
CfoI GCGC 2 cut(s) 1096, 1762
Cfr13I GGNCC 1 cut(s) 1357
CseI GACGC 3 cut(s) 62, 182, 236
Csp6I GTAC 4 cut(s) 103, 163, 1125, 1144
CspCI CAANNNNNGTGG 4 cut(s) 1287, 1322, 1678, 1713
CviAII CATG 9 cut(s) 85, 224, 248, 1067, 1386, 1446, 1568, 1982, 2083
CviQI GTAC 4 cut(s) 103, 163, 1125, 1144
DdeI CTNAG 9 cut(s) 674, 730, 1054, 1218, 1377, 1462, 1644, 1806, 2008
DraI TTTAAA 2 cut(s) 1030, 1890
EaeI YGGCCR 3 cut(s) 443, 473, 1185
EagI CGGCCG 1 cut(s) 443
Eam1104I CTCTTC 1 cut(s) 175
EarI CTCTTC 1 cut(s) 175
EciI GGCGGA 3 cut(s) 321, 590, 1255
EclXI CGGCCG 1 cut(s) 443
Eco130I CCWWGG 2 cut(s) 1232, 1692
Eco31I GGTCTC 2 cut(s) 878, 935
Eco52I CGGCCG 1 cut(s) 443
Eco57I CTGAAG 4 cut(s) 474, 689, 1545, 1902
Eco72I CACGTG 1 cut(s) 1000
Eco81I CCTNAGG 1 cut(s) 1644
Eco88I CYCGRG 1 cut(s) 114
Eco91I GGTNACC 1 cut(s) 1955
EcoNI CCTNNNNNAGG 1 cut(s) 1017
EcoO65I GGTNACC 1 cut(s) 1955
EcoRII CCWGG 2 cut(s) 532, 2173
EcoT14I CCWWGG 2 cut(s) 1232, 1692
ErhI CCWWGG 2 cut(s) 1232, 1692
Esp3I CGTCTC 1 cut(s) 534
FaeI CATG 9 cut(s) 88, 227, 251, 1070, 1389, 1449, 1571, 1985, 2086
FalI AAGNNNNNCTT 4 cut(s) 1833, 1865, 1851, 1883
FaqI GGGAC 2 cut(s) 424, 2101
FatI CATG 9 cut(s) 84, 223, 247, 1066, 1385, 1445, 1567, 1981, 2082
FauI CCCGC 1 cut(s) 169
FauNDI CATATG 2 cut(s) 1323, 2102
FbaI TGATCA 4 cut(s) 283, 592, 1308, 1663
FblI GTMKAC 1 cut(s) 89
Fnu4HI GCNGC 8 cut(s) 5, 290, 293, 335, 402, 446, 2239, 2242
FokI GGATG 6 cut(s) 657, 813, 839, 1100, 1903, 2051
Fsp4HI GCNGC 8 cut(s) 5, 290, 293, 335, 402, 446, 2239, 2242
FspBI CTAG 3 cut(s) 1581, 1680, 1724
GlaI GCGC 2 cut(s) 1095, 1761
GluI GCNGC 8 cut(s) 5, 290, 293, 335, 402, 446, 2239, 2242
GsuI CTGGAG 5 cut(s) 219, 619, 1408, 2009, 2157
HaeIII GGCC 8 cut(s) 132, 445, 475, 1187, 1237, 1358, 1460, 2231
HapII CCGG 6 cut(s) 244, 442, 751, 1162, 1506, 1617
HgaI GACGC 3 cut(s) 62, 182, 236
HhaI GCGC 2 cut(s) 1096, 1762
Hin1I GRCGYC 2 cut(s) 54, 228
Hin1II CATG 9 cut(s) 88, 227, 251, 1070, 1389, 1449, 1571, 1985, 2086
Hin6I GCGC 2 cut(s) 1094, 1760
HinP1I GCGC 2 cut(s) 1094, 1760
HincII GTYRAC 6 cut(s) 368, 470, 796, 918, 1699, 2095
HindII GTYRAC 6 cut(s) 368, 470, 796, 918, 1699, 2095
HindIII AAGCTT 1 cut(s) 1884
HpaII CCGG 6 cut(s) 244, 442, 751, 1162, 1506, 1617
HphI GGTGA 5 cut(s) 73, 263, 1403, 1793, 1967
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 5 cut(s) 55, 498, 713, 2108, 2242
HpyCH4III ACNGT 7 cut(s) 303, 480, 500, 528, 1975, 2092, 2128
HpyCH4IV ACGT 3 cut(s) 39, 885, 999
HpyCH4V TGCA 7 cut(s) 587, 689, 806, 1949, 2164, 2213, 2238
HpyF10VI GCNNNNNNNGC 4 cut(s) 286, 454, 1577, 2161
HpyF3I CTNAG 9 cut(s) 674, 730, 1054, 1218, 1377, 1462, 1644, 1806, 2008
HpySE526I ACGT 3 cut(s) 39, 885, 999
Hsp92I GRCGYC 2 cut(s) 54, 228
Hsp92II CATG 9 cut(s) 88, 227, 251, 1070, 1389, 1449, 1571, 1985, 2086
HspAI GCGC 2 cut(s) 1094, 1760
Ksp22I TGATCA 4 cut(s) 283, 592, 1308, 1663
LmnI GCTCC 5 cut(s) 76, 103, 542, 1990, 2146
Lsp1109I GCAGC 3 cut(s) 304, 2250, 2253
LweI GCATC 3 cut(s) 765, 861, 1081
MaeI CTAG 3 cut(s) 1581, 1680, 1724
MaeII ACGT 3 cut(s) 39, 885, 999
MaeIII GTNAC 8 cut(s) 40, 193, 339, 989, 1409, 1895, 1955, 2059
MfeI CAATTG 1 cut(s) 1120
MflI RGATCY 1 cut(s) 1528
MhlI GDGCHC 2 cut(s) 100, 115
MlsI TGGCCA 1 cut(s) 1187
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 5 cut(s) 1144, 1843, 1921, 2164, 2179
MmeI TCCRAC 5 cut(s) 60, 1149, 1330, 1362, 2091
Mox20I TGGCCA 1 cut(s) 1187
MroXI GAANNNNTTC 1 cut(s) 2118
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 6 cut(s) 1008, 1029, 1733, 1869, 1889, 1995
MslI CAYNNNNRTG 3 cut(s) 998, 1706, 1870
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 2 cut(s) 289, 1523
MspI CCGG 6 cut(s) 244, 442, 751, 1162, 1506, 1617
MspR9I CCNGG 5 cut(s) 442, 534, 752, 1507, 2175
MunI CAATTG 1 cut(s) 1120
MvaI CCWGG 2 cut(s) 534, 2175
MvnI CGCG 3 cut(s) 176, 401, 1760
MwoI GCNNNNNNNGC 4 cut(s) 286, 454, 1577, 2161
NciI CCSGG 3 cut(s) 442, 752, 1507
NdeI CATATG 2 cut(s) 1323, 2102
NlaIII CATG 9 cut(s) 88, 227, 251, 1070, 1389, 1449, 1571, 1985, 2086
NlaIV GGNNCC 4 cut(s) 112, 538, 970, 1359
NmeAIII GCCGAG 1 cut(s) 158
NmuCI GTSAC 5 cut(s) 339, 1409, 1895, 1955, 2059
NspI RCATGY 2 cut(s) 1571, 1985
OliI CACNNNNGTG 1 cut(s) 1706
PagI TCATGA 1 cut(s) 223
PdmI GAANNNNTTC 1 cut(s) 2118
PfeI GAWTC 5 cut(s) 203, 240, 828, 1502, 1510
PfoI TCCNGGA 1 cut(s) 1505
PkrI GCNGC 8 cut(s) 6, 291, 294, 336, 403, 447, 2240, 2243
Ple19I CGATCG 1 cut(s) 157
PleI GAGTC 5 cut(s) 1143, 1842, 1921, 2164, 2179
PmaCI CACGTG 1 cut(s) 1000
PmlI CACGTG 1 cut(s) 1000
PpsI GAGTC 5 cut(s) 1143, 1842, 1921, 2164, 2179
Ppu21I YACGTR 1 cut(s) 1000
Psp1406I AACGTT 1 cut(s) 885
Psp6I CCWGG 2 cut(s) 532, 2173
PspCI CACGTG 1 cut(s) 1000
PspEI GGTNACC 1 cut(s) 1955
PspGI CCWGG 2 cut(s) 532, 2173
PspN4I GGNNCC 4 cut(s) 112, 538, 970, 1359
PspPI GGNCC 1 cut(s) 1357
PstI CTGCAG 2 cut(s) 691, 2240
PsuI RGATCY 1 cut(s) 1528
PvuI CGATCG 1 cut(s) 157
PvuII CAGCTG 1 cut(s) 1523
RsaI GTAC 4 cut(s) 104, 164, 1126, 1145
RsaNI GTAC 4 cut(s) 103, 163, 1125, 1144
RseI CAYNNNNRTG 3 cut(s) 998, 1706, 1870
SaqAI TTAA 6 cut(s) 1008, 1029, 1733, 1869, 1889, 1995
SatI GCNGC 8 cut(s) 5, 290, 293, 335, 402, 446, 2239, 2242
Sau96I GGNCC 1 cut(s) 1357
SchI GAGTC 5 cut(s) 1144, 1843, 1921, 2164, 2179
ScrFI CCNGG 5 cut(s) 442, 534, 752, 1507, 2175
SduI GDGCHC 2 cut(s) 100, 115
SfaNI GCATC 3 cut(s) 765, 861, 1081
SfcI CTRYAG 3 cut(s) 687, 2055, 2236
SmiMI CAYNNNNRTG 3 cut(s) 998, 1706, 1870
SmlI CTYRAG 3 cut(s) 24, 905, 1831
SmoI CTYRAG 3 cut(s) 24, 905, 1831
SspI AATATT 1 cut(s) 810
SspMI CTAG 3 cut(s) 1581, 1680, 1724
StyD4I CCNGG 5 cut(s) 440, 532, 750, 1505, 2173
StyI CCWWGG 2 cut(s) 1232, 1692
TaaI ACNGT 7 cut(s) 303, 480, 500, 528, 1975, 2092, 2128
TaiI ACGT 3 cut(s) 42, 888, 1002
TaqI TCGA 5 cut(s) 262, 325, 669, 976, 1517
TatI WGTACW 2 cut(s) 1124, 1143
TauI GCSGC 5 cut(s) 7, 292, 337, 404, 448
TfiI GAWTC 5 cut(s) 203, 240, 828, 1502, 1510
Tru1I TTAA 6 cut(s) 1008, 1029, 1733, 1869, 1889, 1995
Tru9I TTAA 6 cut(s) 1008, 1029, 1733, 1869, 1889, 1995
TscAI CASTG 7 cut(s) 356, 602, 1582, 1666, 2133, 2171, 2220
TseFI GTSAC 5 cut(s) 339, 1409, 1895, 1955, 2059
TseI GCWGC 3 cut(s) 292, 2238, 2241
Tsp45I GTSAC 5 cut(s) 339, 1409, 1895, 1955, 2059
TspDTI ATGAA 8 cut(s) 212, 758, 1665, 1733, 1782, 1839, 2055, 2071
TspGWI ACGGA 7 cut(s) 90, 150, 353, 372, 408, 813, 2061
TspRI CASTG 7 cut(s) 356, 602, 1582, 1666, 2133, 2171, 2220
XagI CCTNNNNNAGG 1 cut(s) 1017
XapI RAATTY 3 cut(s) 320, 719, 1303
XceI RCATGY 2 cut(s) 1571, 1985
XmiI GTMKAC 1 cut(s) 89
XmnI GAANNNNTTC 1 cut(s) 2118
XspI CTAG 3 cut(s) 1581, 1680, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.