Rh6AG394400

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0005330
Physical Location & Seq
Reverse (-)
59255995 .. 59262183
6189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG394400.1

Sequence Viewer

Length: 2376 bp
ATGAAGCGCCCTCCTCCTCCTCTTCAATACGTCGTCGTTTTAGCCACACGCGCCACCGCAATGTCTTCTCGCCCTCCCTTTCGAGGCGGACGGAACCAATGGAAGAGAGGCTACTCGAATCGTCCGTTTTCCGGCGGCGACAGAGCTCAGTACGTCACCGGAGACTCTCACATCCGGTCGGTCCAGGACGCCAATCTCGGATTCCGGCAAGGCGACGCCGGAAGCTTCACCAACCAACCCGGTCATCACCGTCCGTTTGGTCAGAACAATCAGTTCCGCCGACCTCCGCCGGCGGATCACAGCCAACACTACCGGCCTCACCAGCAATTCCGGCCACCTCAGCAGTCGCGGCAGCGGCATCAGAAGCCGTTGGATTATCGGAATTGGGAGTCTGCCAAAACCACACTGCCCCTTAATTCTGAGAAGTTTATAGTGCTTTCTTATAATATACTGGCTGATTACTTGGCCAATGGCCACCGGAGTAAGCTTTACTATCACATTCCCCGGCATATGATGGACTGGCAATGGAGGAAGAAGAATTTGATTTTCGAGCTTGGCTTGTGGTCAGCTGACATAATGTGCCTTCAGGAGGTTGATAGATTTCAGGAACTTCAGGACGAGTTGAGGCCTCGGGGGTACAGTGGCATATGGAAGATGCGAACTGGCAATCCAGTAGATGGCTGTGCGGTATTTTGGCGGTCATCAAGGTTTAAGCTGCTTCATGAGGAATGCATTGAGTTCAATAAGCTTGGTCTTCGGGATAATGTTGCTCAGATATGTGTGCTGGAGTCGTTGCGTCAAACTTCCAAGGAAAATAATGCAGCTCTACCAACAAGCTCACCAGATTCTAATAAAGTTGTTATTTGTAACATTCATGTTCTTTATAATCCTGGACGAGGAGAAATTAAGCTTGGGCAGGTCAGGGTGCTCCTGGATAAGGCTTGTGCTGTTTCCAAATTCTGGAATGATGCTCCCATTGTTCTTTGTGGGGATTTCAATTGTACTCCAAAGAGTCCATTATATAACTTTATTTCAGAGCAGAAGTTAGATTTGTCTGAAGTGGACAGAGATAAGGTATCAGGGCAAGCCTCAGCTGAAATTGGTCCACCTAGGTCATTTAATCCTAATTATAGGGGTCAGCATGCTAGTAATTTCGTTCGAGGTTCACCAATGGTAGAATGGAAGGAAGTTAACATAAACATGAATGATTTAACCTCAGATCCACAGAACCTGAATAATCCAGAGAGCAGTGTGGAGGATGCCGGTGGGCATGATGCTGAAGCAAACCTGGAATCTAAGCAGAATGCTGTGGATGTCTGTAAGGTTGAAATTGGATTTGAGGAACATCCAAGTGATGGTGACTTGTCTGTAAATTTGAGTGATGAGTTTCATAATTGTTCTCCTGCAGTATCTTCCAATTCTGAAAAGGTTAACTCTGATGTGACTGACATTAGATACAAAGACAGTGTGGAGTACACCTCTAATTCAAATGATGACTCAAATGTTTGTGTAGAAAGAGAAAGCATGAACTGTAGTATCCTTAAACTTTCCTCTACAAAGGACAATGTAACTACTGGCGAGGGTTGTGATACAAATTATGTGGATCCTTTCAGCTCTAAAACTCCTTCGTCTGAGGTCTCTGGTCAGACTTTGTTTGCTGATGCTACTGAAGGCCCCCGATTGGGGAACTTGAGACATTTGCCATCCAAAGAAATTTTTGTTGTTGAGAAGTCAGCCCAACATGAAGTCAATATCACAAGTGCATCTACTAGTGTTGACTTTGAAGTGCAGAAAAATTTGGAAAAAATGTCTCTTACTGAGCTTGATGAAGCCATACCAGAAGGTGGAAACACAGTTGAAGATGATAGTACATTTTTATCTGCATTACACAACACTGGAGATGGCTTCGCATCTGATTTTGCTTCTGATCCTCCTAAGTACATGTTGCCTGCATCAACCGATAGGATTGAGGATGAATTATCTCCAGGATTGGATTCAGAGACAGTTGGTGTGGAGAAAACTATCTATGATCCATCACTATGGACTCCAATGGAGATAGAAACTGCTACAGGCAATGGGGAGTGCACTGATTTAGAACATCCTTTGAAGCTTAAGAGCACATATACTGAAGTTGAGGATTGTACTGGGACTAGGGACTCAAATGGAGAGCCCCTGGTGACCAGTTATAATAGGTGTTTCTTCGGGACAGTTGATTACATCTGGCGATCTGAAGGTCTGCAAACTGTCAGGGTCCTTGCTCCAATTCCAAAACATGCTATGCAATGGACTTCAGGATTCCCAACCAGGAAATGGGGTAGCGATCACATTGCCTTGGCTACTGAGTTGGTGTTCATGAAGTGCTCTGACCAATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exo_endo_phos

Protein Analysis

791

Amino Acids

88.7

Weight (kDa)

5.41

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 188 - 376 3.9e-09 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 444, 885, 2187
Acc36I ACCTGC 1 cut(s) 907
AccB7I CCANNNNNTGG 5 cut(s) 677, 960, 1355, 1844, 2310
AccII CGCG 2 cut(s) 51, 349
AclWI GGATC 6 cut(s) 303, 1214, 1598, 1611, 1922, 2024
AcoI YGGCCR 3 cut(s) 332, 465, 472
AcsI RAATTY 5 cut(s) 538, 956, 1372, 1713, 1795
AcuI CTGAAG 8 cut(s) 569, 596, 1077, 1299, 1689, 2148, 2250, 2274
AcyI GRCGYC 2 cut(s) 189, 216
AfaI GTAC 7 cut(s) 152, 638, 1003, 1475, 1870, 1940, 2143
AflII CTTAAG 1 cut(s) 2111
AflIII ACRYGT 1 cut(s) 1941
AgsI TTSAA 8 cut(s) 26, 742, 997, 1328, 1488, 1784, 1859, 2107
AhlI ACTAGT 1 cut(s) 1769
AjnI CCWGG 7 cut(s) 183, 889, 930, 1287, 1984, 2172, 2303
AjuI GAANNNNNNNTTGG 4 cut(s) 185, 217, 894, 926
AloI GAACNNNNNNTCC 2 cut(s) 652, 684
Alw21I GWGCWC 5 cut(s) 148, 930, 2087, 2120, 2363
Alw26I GTCTC 5 cut(s) 156, 1642, 1687, 1815, 1994
Alw44I GTGCAC 1 cut(s) 2083
AlwI GGATC 6 cut(s) 303, 1214, 1598, 1611, 1922, 2024
AlwNI CAGNNNCTG 1 cut(s) 1231
Ama87I CYCGRG 1 cut(s) 630
AoxI GGCC 6 cut(s) 314, 332, 465, 472, 626, 1672
ApaLI GTGCAC 1 cut(s) 2083
ApeKI GCWGC 3 cut(s) 352, 715, 821
ApoI RAATTY 5 cut(s) 538, 956, 1372, 1713, 1795
AspA2I CCTAGG 1 cut(s) 1109
AspLEI GCGC 2 cut(s) 9, 53
AspS9I GGNCC 4 cut(s) 181, 1103, 1673, 2251
AsuC2I CCSGG 2 cut(s) 240, 505
AsuHPI GGTGA 8 cut(s) 148, 220, 239, 311, 831, 1158, 1370, 2188
AvaI CYCGRG 1 cut(s) 630
AvaII GGWCC 3 cut(s) 181, 1103, 2251
AvrII CCTAGG 1 cut(s) 1109
BaeGI GKGCMC 1 cut(s) 2087
BaeI ACNNNNGTAYC 2 cut(s) 1519, 1552
BalI TGGCCA 2 cut(s) 467, 474
BamHI GGATCC 1 cut(s) 1603
BanII GRGCYC 2 cut(s) 148, 2172
BarI GAAGNNNNNNTAC 2 cut(s) 95, 127
BbsI GAAGAC 2 cut(s) 57, 746
Bbv12I GWGCWC 5 cut(s) 148, 930, 2087, 2120, 2363
BbvCI CCTCAGC 2 cut(s) 339, 1090
BbvI GCAGC 3 cut(s) 364, 702, 833
BccI CCATC 6 cut(s) 508, 671, 1349, 1711, 1895, 2041
BceAI ACGGC 1 cut(s) 352
BcgI CGANNNNNNTGC 2 cut(s) 2309, 2343
BciT130I CCWGG 7 cut(s) 185, 891, 932, 1289, 1986, 2174, 2305
BciVI GTATCC 1 cut(s) 1547
BcnI CCSGG 2 cut(s) 240, 505
BcoDI GTCTC 5 cut(s) 156, 1642, 1687, 1815, 1994
BcuI ACTAGT 1 cut(s) 1769
BfaI CTAG 4 cut(s) 1110, 1146, 1770, 2151
BfmI CTRYAG 3 cut(s) 1404, 1531, 2067
BfoI RGCGCY 1 cut(s) 10
BfrI CTTAAG 1 cut(s) 2111
BfuAI ACCTGC 1 cut(s) 907
BfuI GTATCC 1 cut(s) 1547
BisI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
BlnI CCTAGG 1 cut(s) 1109
BlsI GCNGC 6 cut(s) 137, 351, 354, 357, 717, 823
Bme1390I CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 1986, 2174, 2305
Bme18I GGWCC 3 cut(s) 181, 1103, 2251
BmeT110I CYCGRG 1 cut(s) 630
BmgT120I GGNCC 4 cut(s) 181, 1103, 1673, 2251
BmiI GGNNCC 4 cut(s) 95, 1605, 1675, 2252
BmrFI CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 1986, 2174, 2305
BmrI ACTGGG 1 cut(s) 2154
BmsI GCATC 9 cut(s) 367, 645, 958, 1249, 1264, 1651, 1772, 1919, 1961
BmuI ACTGGG 1 cut(s) 2154
BpiI GAAGAC 2 cut(s) 57, 746
BplI GAGNNNNNCTC 2 cut(s) 1463, 1495
BpmI CTGGAG 3 cut(s) 806, 1917, 1968
Bpu10I CCTNAGC 2 cut(s) 339, 1090
BpuEI CTTGAG 1 cut(s) 1711
BpuMI CCSGG 2 cut(s) 240, 505
BsaHI GRCGYC 2 cut(s) 189, 216
BsaI GGTCTC 1 cut(s) 1642
BsaJI CCNNGG 6 cut(s) 503, 629, 807, 1109, 2172, 2331
BsaWI WCCGGW 3 cut(s) 158, 174, 477
Bse118I RCCGGY 3 cut(s) 289, 312, 1262
Bse1I ACTGG 8 cut(s) 456, 524, 667, 671, 1579, 1900, 2149, 2181
Bse3DI GCAATG 5 cut(s) 66, 530, 2080, 2288, 2325
BseBI CCWGG 7 cut(s) 185, 891, 932, 1289, 1986, 2174, 2305
BseDI CCNNGG 6 cut(s) 503, 629, 807, 1109, 2172, 2331
BseGI GGATG 7 cut(s) 171, 1264, 1318, 1345, 1703, 1978, 2098
BseMI GCAATG 5 cut(s) 66, 530, 2080, 2288, 2325
BseMII CTCAG 9 cut(s) 161, 353, 411, 785, 1104, 1230, 1623, 1809, 2331
BseNI ACTGG 8 cut(s) 456, 524, 667, 671, 1579, 1900, 2149, 2181
BseRI GAGGAG 3 cut(s) 6, 9, 912
BseSI GKGCMC 1 cut(s) 2087
BseXI GCAGC 3 cut(s) 364, 702, 833
BsgI GTGCAG 1 cut(s) 1808
Bsh1236I CGCG 2 cut(s) 51, 349
Bsh1285I CGRYCG 1 cut(s) 179
BshFI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1674
BsiEI CGRYCG 1 cut(s) 179
BsiHKAI GWGCWC 5 cut(s) 148, 930, 2087, 2120, 2363
BsiHKCI CYCGRG 1 cut(s) 630
BslFI GGGAC 3 cut(s) 2161, 2168, 2218
BsmAI GTCTC 5 cut(s) 156, 1642, 1687, 1815, 1994
BsmFI GGGAC 3 cut(s) 2161, 2168, 2218
BsmI GAATGC 2 cut(s) 734, 1309
BsnI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1674
Bso31I GGTCTC 1 cut(s) 1642
BsoBI CYCGRG 1 cut(s) 630
Bsp1286I GDGCHC 6 cut(s) 148, 930, 2087, 2120, 2172, 2363
Bsp143I GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
BspANI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1674
BspCNI CTCAG 9 cut(s) 160, 352, 412, 784, 1103, 1229, 1624, 1810, 2332
BspFNI CGCG 2 cut(s) 51, 349
BspHI TCATGA 2 cut(s) 721, 2352
BspLI GGNNCC 4 cut(s) 95, 1605, 1675, 2252
BspMAI CTGCAG 1 cut(s) 1408
BspMI ACCTGC 1 cut(s) 907
BspPI GGATC 6 cut(s) 303, 1214, 1598, 1611, 1922, 2024
BspTI CTTAAG 1 cut(s) 2111
BspTNI GGTCTC 1 cut(s) 1642
BsrDI GCAATG 5 cut(s) 66, 530, 2080, 2288, 2325
BsrFI RCCGGY 3 cut(s) 289, 312, 1262
BsrI ACTGG 8 cut(s) 456, 524, 667, 671, 1579, 1900, 2149, 2181
BssAI RCCGGY 3 cut(s) 289, 312, 1262
BssECI CCNNGG 6 cut(s) 503, 629, 807, 1109, 2172, 2331
BssMI GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
BssNI GRCGYC 2 cut(s) 189, 216
BssT1I CCWWGG 3 cut(s) 807, 1109, 2331
Bst2UI CCWGG 7 cut(s) 185, 891, 932, 1289, 1986, 2174, 2305
Bst4CI ACNGT 8 cut(s) 251, 641, 1466, 1532, 1855, 2005, 2209, 2245
Bst6I CTCTTC 2 cut(s) 27, 98
BstACI GRCGYC 2 cut(s) 189, 216
BstAFI CTTAAG 1 cut(s) 2111
BstC8I GCNNGC 4 cut(s) 291, 1086, 1143, 1950
BstEII GGTNACC 1 cut(s) 2176
BstENI CCTNNNNNAGG 3 cut(s) 587, 894, 935
BstF5I GGATG 7 cut(s) 171, 1264, 1318, 1345, 1703, 1978, 2098
BstFNI CGCG 2 cut(s) 51, 349
BstH2I RGCGCY 1 cut(s) 10
BstHHI GCGC 2 cut(s) 9, 53
BstKTI GATC 7 cut(s) 298, 1222, 1606, 1930, 2032, 2228, 2323
BstMAI GTCTC 5 cut(s) 156, 1642, 1687, 1815, 1994
BstMBI GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
BstMCI CGRYCG 1 cut(s) 179
BstMWI GCNNNNNNNGC 7 cut(s) 50, 322, 331, 340, 349, 355, 364
BstNI CCWGG 7 cut(s) 185, 891, 932, 1289, 1986, 2174, 2305
BstNSI RCATGY 3 cut(s) 1145, 1945, 2276
BstPI GGTNACC 1 cut(s) 2176
BstSCI CCNGG 9 cut(s) 183, 238, 503, 889, 930, 1287, 1984, 2172, 2303
BstSFI CTRYAG 3 cut(s) 1404, 1531, 2067
BstSLI GKGCMC 1 cut(s) 2087
BstUI CGCG 2 cut(s) 51, 349
BstV1I GCAGC 3 cut(s) 364, 702, 833
BstV2I GAAGAC 2 cut(s) 57, 746
BstX2I RGATCY 2 cut(s) 1219, 1603
BstXI CCANNNNNNTGG 1 cut(s) 2040
BstYI RGATCY 2 cut(s) 1219, 1603
BsuI GTATCC 1 cut(s) 1547
BsuRI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1674
BtsCI GGATG 7 cut(s) 171, 1264, 1318, 1345, 1703, 1978, 2098
BtsI GCAGTG 2 cut(s) 404, 1255
BtsIMutI CAGTG 6 cut(s) 404, 646, 1255, 1471, 1893, 2085
BveI ACCTGC 1 cut(s) 907
Cac8I GCNNGC 4 cut(s) 291, 1086, 1143, 1950
CaiI CAGNNNCTG 1 cut(s) 1231
CciI TCATGA 2 cut(s) 721, 2352
CfoI GCGC 2 cut(s) 9, 53
Cfr10I RCCGGY 3 cut(s) 289, 312, 1262
Cfr13I GGNCC 4 cut(s) 181, 1103, 1673, 2251
CseI GACGC 3 cut(s) 197, 224, 785
Csp6I GTAC 7 cut(s) 151, 637, 1002, 1474, 1869, 1939, 2142
CspCI CAANNNNNGTGG 2 cut(s) 1581, 1616
CviQI GTAC 7 cut(s) 151, 637, 1002, 1474, 1869, 1939, 2142
DpnI GATC 7 cut(s) 297, 1221, 1605, 1929, 2031, 2227, 2322
DpnII GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
EaeI YGGCCR 3 cut(s) 332, 465, 472
Eam1104I CTCTTC 2 cut(s) 27, 98
EarI CTCTTC 2 cut(s) 27, 98
EciI GGCGGA 4 cut(s) 102, 266, 276, 308
Ecl136II GAGCTC 1 cut(s) 146
Eco130I CCWWGG 3 cut(s) 807, 1109, 2331
Eco147I AGGCCT 1 cut(s) 628
Eco24I GRGCYC 2 cut(s) 148, 2172
Eco31I GGTCTC 1 cut(s) 1642
Eco47I GGWCC 3 cut(s) 181, 1103, 2251
Eco53kI GAGCTC 1 cut(s) 146
Eco57I CTGAAG 8 cut(s) 569, 596, 1077, 1299, 1689, 2148, 2250, 2274
Eco88I CYCGRG 1 cut(s) 630
Eco91I GGTNACC 1 cut(s) 2176
EcoICRI GAGCTC 1 cut(s) 146
EcoNI CCTNNNNNAGG 3 cut(s) 587, 894, 935
EcoO109I RGGNCCY 2 cut(s) 1673, 2251
EcoO65I GGTNACC 1 cut(s) 2176
EcoRII CCWGG 7 cut(s) 183, 889, 930, 1287, 1984, 2172, 2303
EcoT14I CCWWGG 3 cut(s) 807, 1109, 2331
EcoT22I ATGCAT 1 cut(s) 734
EcoT38I GRGCYC 2 cut(s) 148, 2172
ErhI CCWWGG 3 cut(s) 807, 1109, 2331
FaqI GGGAC 3 cut(s) 2161, 2168, 2218
FauNDI CATATG 2 cut(s) 510, 647
Fnu4HI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
FokI GGATG 7 cut(s) 158, 1271, 1325, 1332, 1690, 1985, 2085
FriOI GRGCYC 2 cut(s) 148, 2172
Fsp4HI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
FspBI CTAG 4 cut(s) 1110, 1146, 1770, 2151
GlaI GCGC 2 cut(s) 8, 52
GluI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
GsuI CTGGAG 3 cut(s) 806, 1917, 1968
HaeII RGCGCY 1 cut(s) 10
HaeIII GGCC 6 cut(s) 316, 334, 467, 474, 628, 1674
HgaI GACGC 3 cut(s) 197, 224, 785
HhaI GCGC 2 cut(s) 9, 53
Hin1I GRCGYC 2 cut(s) 189, 216
Hin6I GCGC 2 cut(s) 7, 51
HinP1I GCGC 2 cut(s) 7, 51
HincII GTYRAC 3 cut(s) 1192, 1432, 1777
HindII GTYRAC 3 cut(s) 1192, 1432, 1777
HindIII AAGCTT 5 cut(s) 223, 485, 746, 908, 2108
HpaI GTTAAC 2 cut(s) 1192, 1432
HphI GGTGA 8 cut(s) 148, 220, 239, 311, 831, 1158, 1370, 2188
Hpy166II GTNNAC 8 cut(s) 1063, 1106, 1166, 1192, 1432, 1476, 1777, 2085
Hpy8I GTNNAC 8 cut(s) 1063, 1106, 1166, 1192, 1432, 1476, 1777, 2085
Hpy99I CGWCG 3 cut(s) 35, 38, 218
HpyAV CCTTC 6 cut(s) 593, 1177, 1635, 1664, 1835, 2225
HpyCH4III ACNGT 8 cut(s) 251, 641, 1466, 1532, 1855, 2005, 2209, 2245
HpyCH4IV ACGT 2 cut(s) 30, 153
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 322, 331, 340, 349, 355, 364
HpySE526I ACGT 2 cut(s) 30, 153
Hsp92I GRCGYC 2 cut(s) 189, 216
HspAI GCGC 2 cut(s) 7, 51
KroI GCCGGC 1 cut(s) 289
KroNI GCCGGC 1 cut(s) 291
KspAI GTTAAC 2 cut(s) 1192, 1432
Kzo9I GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
LmnI GCTCC 3 cut(s) 933, 976, 2263
Lsp1109I GCAGC 3 cut(s) 364, 702, 833
LweI GCATC 9 cut(s) 367, 645, 958, 1249, 1264, 1651, 1772, 1919, 1961
MaeI CTAG 4 cut(s) 1110, 1146, 1770, 2151
MaeII ACGT 2 cut(s) 30, 153
MaeIII GTNAC 6 cut(s) 154, 866, 1358, 1441, 1567, 2176
MalI GATC 7 cut(s) 297, 1221, 1605, 1929, 2031, 2227, 2322
MboI GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
MfeI CAATTG 1 cut(s) 997
MflI RGATCY 2 cut(s) 1219, 1603
MhlI GDGCHC 6 cut(s) 148, 930, 2087, 2120, 2172, 2363
MlsI TGGCCA 2 cut(s) 467, 474
MluNI TGGCCA 2 cut(s) 467, 474
MlyI GAGTC 7 cut(s) 158, 398, 797, 1021, 1490, 2038, 2150
MmeI TCCRAC 1 cut(s) 351
Mox20I TGGCCA 2 cut(s) 467, 474
Mph1103I ATGCAT 1 cut(s) 734
MreI CGCCGGCG 1 cut(s) 289
MroNI GCCGGC 1 cut(s) 289
MscI TGGCCA 2 cut(s) 467, 474
MseI TTAA 9 cut(s) 414, 711, 906, 1119, 1191, 1211, 1431, 1542, 2112
MslI CAYNNNNRTG 4 cut(s) 59, 1199, 1350, 2038
Msp20I TGGCCA 2 cut(s) 467, 474
MspA1I CMGCKG 3 cut(s) 355, 569, 1094
MspCI CTTAAG 1 cut(s) 2111
MspR9I CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 1986, 2174, 2305
MunI CAATTG 1 cut(s) 997
Mva1269I GAATGC 2 cut(s) 734, 1309
MvaI CCWGG 7 cut(s) 185, 891, 932, 1289, 1986, 2174, 2305
MvnI CGCG 2 cut(s) 51, 349
MwoI GCNNNNNNNGC 7 cut(s) 50, 322, 331, 340, 349, 355, 364
NaeI GCCGGC 1 cut(s) 291
NciI CCSGG 2 cut(s) 240, 505
NdeI CATATG 2 cut(s) 510, 647
NdeII GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
NgoMIV GCCGGC 1 cut(s) 289
NlaIV GGNNCC 4 cut(s) 95, 1605, 1675, 2252
NmuCI GTSAC 4 cut(s) 154, 1358, 1441, 2176
NsiI ATGCAT 1 cut(s) 734
NspI RCATGY 3 cut(s) 1145, 1945, 2276
PaeI GCATGC 1 cut(s) 1145
PagI TCATGA 2 cut(s) 721, 2352
PceI AGGCCT 1 cut(s) 628
PciI ACATGT 1 cut(s) 1941
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PctI GAATGC 2 cut(s) 734, 1309
PdiI GCCGGC 1 cut(s) 291
PfeI GAWTC 6 cut(s) 118, 201, 845, 1292, 1994, 2295
PflMI CCANNNNNTGG 5 cut(s) 677, 960, 1355, 1844, 2310
PfoI TCCNGGA 4 cut(s) 183, 889, 930, 1984
PkrI GCNGC 6 cut(s) 137, 351, 354, 357, 717, 823
PleI GAGTC 7 cut(s) 158, 397, 796, 1020, 1490, 2038, 2150
PpsI GAGTC 7 cut(s) 158, 397, 796, 1020, 1490, 2038, 2150
PpuMI RGGWCCY 1 cut(s) 2251
PscI ACATGT 1 cut(s) 1941
PsiI TTATAA 3 cut(s) 444, 885, 2187
Psp124BI GAGCTC 1 cut(s) 148
Psp5II RGGWCCY 1 cut(s) 2251
Psp6I CCWGG 7 cut(s) 183, 889, 930, 1287, 1984, 2172, 2303
PspEI GGTNACC 1 cut(s) 2176
PspGI CCWGG 7 cut(s) 183, 889, 930, 1287, 1984, 2172, 2303
PspN4I GGNNCC 4 cut(s) 95, 1605, 1675, 2252
PspPI GGNCC 4 cut(s) 181, 1103, 1673, 2251
PspPPI RGGWCCY 1 cut(s) 2251
PstI CTGCAG 1 cut(s) 1408
PstNI CAGNNNCTG 1 cut(s) 1231
PsuI RGATCY 2 cut(s) 1219, 1603
PvuII CAGCTG 2 cut(s) 569, 1094
RsaI GTAC 7 cut(s) 152, 638, 1003, 1475, 1870, 1940, 2143
RsaNI GTAC 7 cut(s) 151, 637, 1002, 1474, 1869, 1939, 2142
RseI CAYNNNNRTG 4 cut(s) 59, 1199, 1350, 2038
SacI GAGCTC 1 cut(s) 148
SaqAI TTAA 9 cut(s) 414, 711, 906, 1119, 1191, 1211, 1431, 1542, 2112
SatI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
Sau3AI GATC 7 cut(s) 295, 1219, 1603, 1927, 2029, 2225, 2320
Sau96I GGNCC 4 cut(s) 181, 1103, 1673, 2251
SchI GAGTC 7 cut(s) 158, 398, 797, 1021, 1490, 2038, 2150
ScrFI CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 1986, 2174, 2305
SduI GDGCHC 6 cut(s) 148, 930, 2087, 2120, 2172, 2363
SfaNI GCATC 9 cut(s) 367, 645, 958, 1249, 1264, 1651, 1772, 1919, 1961
SfcI CTRYAG 3 cut(s) 1404, 1531, 2067
SgrAI CRCCGGYG 1 cut(s) 289
SinI GGWCC 3 cut(s) 181, 1103, 2251
SmiMI CAYNNNNRTG 4 cut(s) 59, 1199, 1350, 2038
SmlI CTYRAG 2 cut(s) 1690, 2111
SmoI CTYRAG 2 cut(s) 1690, 2111
SpeI ACTAGT 1 cut(s) 1769
SphI GCATGC 1 cut(s) 1145
SseBI AGGCCT 1 cut(s) 628
SspMI CTAG 4 cut(s) 1110, 1146, 1770, 2151
SstI GAGCTC 1 cut(s) 148
StuI AGGCCT 1 cut(s) 628
StyD4I CCNGG 9 cut(s) 183, 238, 503, 889, 930, 1287, 1984, 2172, 2303
StyI CCWWGG 3 cut(s) 807, 1109, 2331
TaaI ACNGT 8 cut(s) 251, 641, 1466, 1532, 1855, 2005, 2209, 2245
TaiI ACGT 2 cut(s) 33, 156
TaqI TCGA 4 cut(s) 82, 116, 549, 1159
TaqII GACCGA 1 cut(s) 169
TatI WGTACW 5 cut(s) 1001, 1473, 1868, 1938, 2141
TauI GCSGC 3 cut(s) 138, 352, 358
TfiI GAWTC 6 cut(s) 118, 201, 845, 1292, 1994, 2295
Tru1I TTAA 9 cut(s) 414, 711, 906, 1119, 1191, 1211, 1431, 1542, 2112
Tru9I TTAA 9 cut(s) 414, 711, 906, 1119, 1191, 1211, 1431, 1542, 2112
TscAI CASTG 6 cut(s) 411, 646, 1255, 1471, 1900, 2092
TseFI GTSAC 4 cut(s) 154, 1358, 1441, 2176
TseI GCWGC 3 cut(s) 352, 715, 821
Tsp45I GTSAC 4 cut(s) 154, 1358, 1441, 2176
TspGWI ACGGA 3 cut(s) 106, 114, 243
TspRI CASTG 6 cut(s) 411, 646, 1255, 1471, 1900, 2092
Van91I CCANNNNNTGG 5 cut(s) 677, 960, 1355, 1844, 2310
Vha464I CTTAAG 1 cut(s) 2111
VneI GTGCAC 1 cut(s) 2083
VpaK11BI GGWCC 3 cut(s) 181, 1103, 2251
XagI CCTNNNNNAGG 3 cut(s) 587, 894, 935
XapI RAATTY 5 cut(s) 538, 956, 1372, 1713, 1795
XceI RCATGY 3 cut(s) 1145, 1945, 2276
XcmI CCANNNNNNNNNTGG 2 cut(s) 1176, 2307
XmaJI CCTAGG 1 cut(s) 1109
XspI CTAG 4 cut(s) 1110, 1146, 1770, 2151
Zsp2I ATGCAT 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.