Carbon catabolite repressor protein 4 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11350 AT5G11350 AT5G11350 AT5G11350 AT5G11350 |
| fragaria_vesca | FvH4_2g29760 FvH4_2g29760 FvH4_2g29760 FvH4_2g29760 FvH4_2g29760 FvH4_2g29760 FvH4_2g29760 FvH4_2g29760 |
| malus_domestica | MD15G1118800.v1.1 |
| prunus_persica | Prupe.1G472000_v2.0.a1 Prupe.1G472000_v2.0.a1 |
| pyrus_communis | pycom15g10680 |
| rosa_chinensis | RchiOBHm_Chr6g0298781 |
| rosa_laevigata | RLG00000011486 |
| rosa_multiflora | Rmu_sc0020571.1_g000001 Rmu_sc0020572.1_g000001 Rmu_ssc0000397.1_g000015 |
| rosa_roxburghii | Rroxscaffold_7G00169340 |
| rosa_rugosa | Rorug06G0282900 |
| rosa_samantha | Rh6AG394400 Rh6BG402200 Rh6CG408100 Rh6DG394800 |
| rosa_wichuraiana | Rw6G034500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2220 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1197 |
| Acc36I | ACCTGC | 1 cut(s) | 1201 |
| AccB1I | GGYRCC | 1 cut(s) | 2180 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 728, 1011, 1790, 2343 |
| AccBSI | CCGCTC | 2 cut(s) | 186, 1557 |
| AccII | CGCG | 3 cut(s) | 79, 195, 297 |
| AccIII | TCCGGA | 1 cut(s) | 227 |
| AclI | AACGTT | 1 cut(s) | 1952 |
| AclWI | GGATC | 4 cut(s) | 1486, 1655, 1775, 2057 |
| AcoI | YGGCCR | 4 cut(s) | 332, 386, 410, 964 |
| AcsI | RAATTY | 5 cut(s) | 440, 589, 650, 1149, 1567 |
| AcuI | CTGAAG | 8 cut(s) | 620, 1125, 1797, 1959, 1989, 2159, 2181, 2307 |
| AcyI | GRCGYC | 1 cut(s) | 198 |
| AfaI | GTAC | 5 cut(s) | 329, 689, 898, 1054, 1348 |
| AflII | CTTAAG | 1 cut(s) | 2144 |
| AjnI | CCWGG | 3 cut(s) | 966, 1716, 2205 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 945, 977 |
| Alw21I | GWGCWC | 2 cut(s) | 606, 2153 |
| Alw26I | GTCTC | 4 cut(s) | 165, 1338, 1465, 1750 |
| AlwI | GGATC | 4 cut(s) | 1486, 1655, 1775, 2057 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1670, 1790 |
| Ama87I | CYCGRG | 2 cut(s) | 605, 1252 |
| Aor13HI | TCCGGA | 1 cut(s) | 227 |
| AoxI | GGCC | 6 cut(s) | 332, 350, 386, 404, 410, 964 |
| ApeKI | GCWGC | 4 cut(s) | 41, 307, 394, 872 |
| ApoI | RAATTY | 5 cut(s) | 440, 589, 650, 1149, 1567 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1316, 1348 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1914 |
| AspLEI | GCGC | 1 cut(s) | 81 |
| AspS9I | GGNCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| AsuC2I | CCSGG | 1 cut(s) | 214 |
| AsuHPI | GGTGA | 7 cut(s) | 55, 157, 518, 609, 1519, 2028, 2221 |
| AvaI | CYCGRG | 2 cut(s) | 605, 1252 |
| AvaII | GGWCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| BaeGI | GKGCMC | 1 cut(s) | 2240 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1728, 1761 |
| BalI | TGGCCA | 1 cut(s) | 966 |
| BanI | GGYRCC | 1 cut(s) | 2180 |
| BanII | GRGCYC | 3 cut(s) | 606, 994, 2205 |
| BbsI | GAAGAC | 2 cut(s) | 66, 1767 |
| Bbv12I | GWGCWC | 2 cut(s) | 606, 2153 |
| BbvCI | CCTCAGC | 1 cut(s) | 375 |
| BbvI | GCAGC | 4 cut(s) | 28, 319, 406, 884 |
| BceAI | ACGGC | 2 cut(s) | 44, 256 |
| BciT130I | CCWGG | 3 cut(s) | 968, 1718, 2207 |
| BciVI | GTATCC | 1 cut(s) | 1499 |
| BclI | TGATCA | 2 cut(s) | 1171, 2353 |
| BcnI | CCSGG | 1 cut(s) | 214 |
| BcoDI | GTCTC | 4 cut(s) | 165, 1338, 1465, 1750 |
| BfaI | CTAG | 7 cut(s) | 206, 503, 942, 1197, 1583, 1851, 1904 |
| BfmI | CTRYAG | 1 cut(s) | 2270 |
| BfrI | CTTAAG | 1 cut(s) | 2144 |
| BfuAI | ACCTGC | 1 cut(s) | 1201 |
| BfuI | GTATCC | 1 cut(s) | 1499 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1919 |
| BmcAI | AGTACT | 1 cut(s) | 1348 |
| Bme1390I | CCNGG | 4 cut(s) | 214, 968, 1718, 2207 |
| Bme18I | GGWCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| BmeT110I | CYCGRG | 2 cut(s) | 605, 1252 |
| BmgT120I | GGNCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| BmiI | GGNNCC | 8 cut(s) | 211, 212, 232, 1411, 1677, 2182, 2202, 2330 |
| BmrFI | CCNGG | 4 cut(s) | 214, 968, 1718, 2207 |
| BmrI | ACTGGG | 1 cut(s) | 445 |
| BmsI | GCATC | 3 cut(s) | 1009, 1972, 2042 |
| BmuI | ACTGGG | 1 cut(s) | 445 |
| BpiI | GAAGAC | 2 cut(s) | 66, 1767 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 27 |
| BpmI | CTGGAG | 3 cut(s) | 857, 1128, 1341 |
| Bpu10I | CCTNAGC | 1 cut(s) | 375 |
| BpuEI | CTTGAG | 2 cut(s) | 683, 1194 |
| BpuMI | CCSGG | 1 cut(s) | 214 |
| BsaBI | GATNNNNATC | 1 cut(s) | 318 |
| BsaHI | GRCGYC | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 7 cut(s) | 91, 107, 295, 407, 420, 1160, 2205 |
| BsaWI | WCCGGW | 3 cut(s) | 167, 227, 528 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 233, 263, 1339, 1369 |
| Bse118I | RCCGGY | 1 cut(s) | 330 |
| Bse1I | ACTGG | 7 cut(s) | 440, 575, 718, 722, 1480, 1784, 2214 |
| Bse3DI | GCAATG | 1 cut(s) | 2113 |
| Bse8I | GATNNNNATC | 1 cut(s) | 318 |
| BseAI | TCCGGA | 1 cut(s) | 227 |
| BseBI | CCWGG | 3 cut(s) | 968, 1718, 2207 |
| BseDI | CCNNGG | 7 cut(s) | 91, 107, 295, 407, 420, 1160, 2205 |
| BseGI | GGATG | 2 cut(s) | 737, 2131 |
| BseJI | GATNNNNATC | 1 cut(s) | 318 |
| BseMI | GCAATG | 1 cut(s) | 2113 |
| BseMII | CTCAG | 9 cut(s) | 153, 201, 389, 1349, 1455, 1488, 1701, 2034, 2364 |
| BseNI | ACTGG | 7 cut(s) | 440, 575, 718, 722, 1480, 1784, 2214 |
| BseRI | GAGGAG | 3 cut(s) | 6, 680, 683 |
| BseSI | GKGCMC | 1 cut(s) | 2240 |
| BseX3I | CGGCCG | 3 cut(s) | 332, 386, 410 |
| BseXI | GCAGC | 4 cut(s) | 28, 319, 406, 884 |
| BsgI | GTGCAG | 1 cut(s) | 1323 |
| Bsh1236I | CGCG | 3 cut(s) | 79, 195, 297 |
| Bsh1285I | CGRYCG | 3 cut(s) | 335, 389, 413 |
| BshFI | GGCC | 6 cut(s) | 334, 352, 388, 406, 412, 966 |
| BshNI | GGYRCC | 1 cut(s) | 2180 |
| BsiEI | CGRYCG | 3 cut(s) | 335, 389, 413 |
| BsiHKAI | GWGCWC | 2 cut(s) | 606, 2153 |
| BsiHKCI | CYCGRG | 2 cut(s) | 605, 1252 |
| BsiSI | CCGG | 7 cut(s) | 168, 214, 228, 331, 403, 529, 1919 |
| BslFI | GGGAC | 4 cut(s) | 196, 445, 1646, 1669 |
| BsmAI | GTCTC | 4 cut(s) | 165, 1338, 1465, 1750 |
| BsmFI | GGGAC | 4 cut(s) | 196, 445, 1646, 1669 |
| BsnI | GGCC | 6 cut(s) | 334, 352, 388, 406, 412, 966 |
| BsoBI | CYCGRG | 2 cut(s) | 605, 1252 |
| Bsp1286I | GDGCHC | 5 cut(s) | 606, 994, 2153, 2205, 2240 |
| Bsp13I | TCCGGA | 1 cut(s) | 227 |
| Bsp1407I | TGTACA | 1 cut(s) | 1052 |
| Bsp143I | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| Bsp19I | CCATGG | 1 cut(s) | 107 |
| BspANI | GGCC | 6 cut(s) | 334, 352, 388, 406, 412, 966 |
| BspCNI | CTCAG | 9 cut(s) | 152, 200, 388, 1348, 1456, 1489, 1700, 2033, 2365 |
| BspEI | TCCGGA | 1 cut(s) | 227 |
| BspFNI | CGCG | 3 cut(s) | 79, 195, 297 |
| BspLI | GGNNCC | 8 cut(s) | 211, 212, 232, 1411, 1677, 2182, 2202, 2330 |
| BspMAI | CTGCAG | 1 cut(s) | 2274 |
| BspMI | ACCTGC | 1 cut(s) | 1201 |
| BspPI | GGATC | 4 cut(s) | 1486, 1655, 1775, 2057 |
| BspT107I | GGYRCC | 1 cut(s) | 2180 |
| BspTI | CTTAAG | 1 cut(s) | 2144 |
| BsrBI | CCGCTC | 2 cut(s) | 186, 1557 |
| BsrDI | GCAATG | 1 cut(s) | 2113 |
| BsrFI | RCCGGY | 1 cut(s) | 330 |
| BsrGI | TGTACA | 1 cut(s) | 1052 |
| BsrI | ACTGG | 7 cut(s) | 440, 575, 718, 722, 1480, 1784, 2214 |
| BssAI | RCCGGY | 1 cut(s) | 330 |
| BssECI | CCNNGG | 7 cut(s) | 91, 107, 295, 407, 420, 1160, 2205 |
| BssMI | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| BssNI | GRCGYC | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 3 cut(s) | 107, 420, 1160 |
| Bst2UI | CCWGG | 3 cut(s) | 968, 1718, 2207 |
| Bst4CI | ACNGT | 7 cut(s) | 327, 459, 484, 1409, 1604, 2242, 2278 |
| Bst6I | CTCTTC | 1 cut(s) | 1753 |
| BstACI | GRCGYC | 1 cut(s) | 198 |
| BstAFI | CTTAAG | 1 cut(s) | 2144 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2311 |
| BstAUI | TGTACA | 1 cut(s) | 1052 |
| BstC8I | GCNNGC | 4 cut(s) | 833, 1486, 2289, 2307 |
| BstDSI | CCRYGG | 2 cut(s) | 107, 295 |
| BstEII | GGTNACC | 2 cut(s) | 615, 2209 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 90, 665 |
| BstF5I | GGATG | 2 cut(s) | 737, 2131 |
| BstFNI | CGCG | 3 cut(s) | 79, 195, 297 |
| BstHHI | GCGC | 1 cut(s) | 81 |
| BstKTI | GATC | 9 cut(s) | 316, 526, 752, 1174, 1481, 1663, 1783, 2065, 2356 |
| BstMAI | GTCTC | 4 cut(s) | 165, 1338, 1465, 1750 |
| BstMBI | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| BstMCI | CGRYCG | 3 cut(s) | 335, 389, 413 |
| BstNI | CCWGG | 3 cut(s) | 968, 1718, 2207 |
| BstNSI | RCATGY | 1 cut(s) | 1488 |
| BstPI | GGTNACC | 2 cut(s) | 615, 2209 |
| BstSCI | CCNGG | 4 cut(s) | 212, 966, 1716, 2205 |
| BstSFI | CTRYAG | 1 cut(s) | 2270 |
| BstSLI | GKGCMC | 1 cut(s) | 2240 |
| BstUI | CGCG | 3 cut(s) | 79, 195, 297 |
| BstV1I | GCAGC | 4 cut(s) | 28, 319, 406, 884 |
| BstV2I | GAAGAC | 2 cut(s) | 66, 1767 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2073 |
| BstZI | CGGCCG | 3 cut(s) | 332, 386, 410 |
| BsuI | GTATCC | 1 cut(s) | 1499 |
| BsuRI | GGCC | 6 cut(s) | 334, 352, 388, 406, 412, 966 |
| BtgI | CCRYGG | 2 cut(s) | 107, 295 |
| BtsCI | GGATG | 2 cut(s) | 737, 2131 |
| BtsI | GCAGTG | 1 cut(s) | 2321 |
| BtsIMutI | CAGTG | 1 cut(s) | 2321 |
| BveI | ACCTGC | 1 cut(s) | 1201 |
| Cac8I | GCNNGC | 4 cut(s) | 833, 1486, 2289, 2307 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1670, 1790 |
| CfoI | GCGC | 1 cut(s) | 81 |
| Cfr10I | RCCGGY | 1 cut(s) | 330 |
| Cfr13I | GGNCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| Cfr42I | CCGCGG | 1 cut(s) | 298 |
| CseI | GACGC | 1 cut(s) | 206 |
| Csp6I | GTAC | 5 cut(s) | 328, 688, 897, 1053, 1347 |
| CviAII | CATG | 9 cut(s) | 70, 108, 773, 926, 995, 1485, 1490, 1544, 1839 |
| CviQI | GTAC | 5 cut(s) | 328, 688, 897, 1053, 1347 |
| DpnI | GATC | 9 cut(s) | 315, 525, 751, 1173, 1480, 1662, 1782, 2064, 2355 |
| DpnII | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1197 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1197 |
| EaeI | YGGCCR | 4 cut(s) | 332, 386, 410, 964 |
| EagI | CGGCCG | 3 cut(s) | 332, 386, 410 |
| Eam1104I | CTCTTC | 1 cut(s) | 1753 |
| EarI | CTCTTC | 1 cut(s) | 1753 |
| EciI | GGCGGA | 2 cut(s) | 46, 255 |
| Ecl136II | GAGCTC | 1 cut(s) | 604 |
| EclXI | CGGCCG | 3 cut(s) | 332, 386, 410 |
| Eco130I | CCWWGG | 3 cut(s) | 107, 420, 1160 |
| Eco24I | GRGCYC | 3 cut(s) | 606, 994, 2205 |
| Eco32I | GATATC | 2 cut(s) | 1273, 1609 |
| Eco47I | GGWCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| Eco52I | CGGCCG | 3 cut(s) | 332, 386, 410 |
| Eco53kI | GAGCTC | 1 cut(s) | 604 |
| Eco57I | CTGAAG | 8 cut(s) | 620, 1125, 1797, 1959, 1989, 2159, 2181, 2307 |
| Eco88I | CYCGRG | 2 cut(s) | 605, 1252 |
| Eco91I | GGTNACC | 2 cut(s) | 615, 2209 |
| EcoICRI | GAGCTC | 1 cut(s) | 604 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 90, 665 |
| EcoO109I | RGGNCCY | 2 cut(s) | 210, 658 |
| EcoO65I | GGTNACC | 2 cut(s) | 615, 2209 |
| EcoRI | GAATTC | 1 cut(s) | 1567 |
| EcoRII | CCWGG | 3 cut(s) | 966, 1716, 2205 |
| EcoRV | GATATC | 2 cut(s) | 1273, 1609 |
| EcoT14I | CCWWGG | 3 cut(s) | 107, 420, 1160 |
| EcoT38I | GRGCYC | 3 cut(s) | 606, 994, 2205 |
| ErhI | CCWWGG | 3 cut(s) | 107, 420, 1160 |
| FaeI | CATG | 9 cut(s) | 73, 111, 776, 929, 998, 1488, 1493, 1547, 1842 |
| FaqI | GGGAC | 4 cut(s) | 196, 445, 1646, 1669 |
| FatI | CATG | 9 cut(s) | 69, 107, 772, 925, 994, 1484, 1489, 1543, 1838 |
| FauNDI | CATATG | 2 cut(s) | 561, 1168 |
| FbaI | TGATCA | 2 cut(s) | 1171, 2353 |
| FokI | GGATG | 2 cut(s) | 744, 2118 |
| FriOI | GRGCYC | 3 cut(s) | 606, 994, 2205 |
| FspBI | CTAG | 7 cut(s) | 206, 503, 942, 1197, 1583, 1851, 1904 |
| GlaI | GCGC | 1 cut(s) | 80 |
| GsuI | CTGGAG | 3 cut(s) | 857, 1128, 1341 |
| HaeIII | GGCC | 6 cut(s) | 334, 352, 388, 406, 412, 966 |
| HapII | CCGG | 7 cut(s) | 168, 214, 228, 331, 403, 529, 1919 |
| HgaI | GACGC | 1 cut(s) | 206 |
| HhaI | GCGC | 1 cut(s) | 81 |
| Hin1I | GRCGYC | 1 cut(s) | 198 |
| Hin1II | CATG | 9 cut(s) | 73, 111, 776, 929, 998, 1488, 1493, 1547, 1842 |
| Hin6I | GCGC | 1 cut(s) | 79 |
| HinP1I | GCGC | 1 cut(s) | 79 |
| HincII | GTYRAC | 2 cut(s) | 286, 1114 |
| HindII | GTYRAC | 2 cut(s) | 286, 1114 |
| HindIII | AAGCTT | 5 cut(s) | 677, 797, 959, 1137, 2141 |
| HpaII | CCGG | 7 cut(s) | 168, 214, 228, 331, 403, 529, 1919 |
| HphI | GGTGA | 7 cut(s) | 55, 157, 518, 609, 1519, 2028, 2221 |
| Hpy166II | GTNNAC | 7 cut(s) | 286, 480, 1055, 1114, 1217, 1429, 2319 |
| Hpy8I | GTNNAC | 7 cut(s) | 286, 480, 1055, 1114, 1217, 1429, 2319 |
| Hpy99I | CGWCG | 2 cut(s) | 200, 261 |
| HpyAV | CCTTC | 6 cut(s) | 30, 244, 644, 1646, 1821, 2258 |
| HpyCH4III | ACNGT | 7 cut(s) | 327, 459, 484, 1409, 1604, 2242, 2278 |
| HpyCH4IV | ACGT | 4 cut(s) | 162, 847, 1362, 1952 |
| HpySE526I | ACGT | 4 cut(s) | 162, 847, 1362, 1952 |
| Hsp92I | GRCGYC | 1 cut(s) | 198 |
| Hsp92II | CATG | 9 cut(s) | 73, 111, 776, 929, 998, 1488, 1493, 1547, 1842 |
| HspAI | GCGC | 1 cut(s) | 79 |
| KflI | GGGWCCC | 1 cut(s) | 210 |
| Kpn2I | TCCGGA | 1 cut(s) | 227 |
| Ksp22I | TGATCA | 2 cut(s) | 1171, 2353 |
| KspI | CCGCGG | 1 cut(s) | 298 |
| Kzo9I | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| LmnI | GCTCC | 4 cut(s) | 16, 1027, 2200, 2296 |
| Lsp1109I | GCAGC | 4 cut(s) | 28, 319, 406, 884 |
| LweI | GCATC | 3 cut(s) | 1009, 1972, 2042 |
| MaeI | CTAG | 7 cut(s) | 206, 503, 942, 1197, 1583, 1851, 1904 |
| MaeII | ACGT | 4 cut(s) | 162, 847, 1362, 1952 |
| MaeIII | GTNAC | 8 cut(s) | 61, 163, 363, 615, 917, 1492, 2008, 2209 |
| MalI | GATC | 9 cut(s) | 315, 525, 751, 1173, 1480, 1662, 1782, 2064, 2355 |
| MbiI | CCGCTC | 2 cut(s) | 186, 1557 |
| MboI | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| MboII | GAAGA | 7 cut(s) | 66, 715, 1523, 1740, 1767, 1952, 1991 |
| MfeI | CAATTG | 3 cut(s) | 1026, 1048, 1221 |
| MhlI | GDGCHC | 5 cut(s) | 606, 994, 2153, 2205, 2240 |
| MlsI | TGGCCA | 1 cut(s) | 966 |
| MluNI | TGGCCA | 1 cut(s) | 966 |
| MlyI | GAGTC | 7 cut(s) | 167, 256, 848, 1072, 1679, 1811, 2071 |
| MmeI | TCCRAC | 3 cut(s) | 150, 239, 1168 |
| Mox20I | TGGCCA | 1 cut(s) | 966 |
| MroI | TCCGGA | 1 cut(s) | 227 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1914 |
| MscI | TGGCCA | 1 cut(s) | 966 |
| MseI | TTAA | 4 cut(s) | 681, 957, 1896, 2145 |
| MslI | CAYNNNNRTG | 4 cut(s) | 68, 926, 1179, 2071 |
| Msp20I | TGGCCA | 1 cut(s) | 966 |
| MspA1I | CMGCKG | 3 cut(s) | 41, 297, 1937 |
| MspCI | CTTAAG | 1 cut(s) | 2144 |
| MspI | CCGG | 7 cut(s) | 168, 214, 228, 331, 403, 529, 1919 |
| MspR9I | CCNGG | 4 cut(s) | 214, 968, 1718, 2207 |
| MunI | CAATTG | 3 cut(s) | 1026, 1048, 1221 |
| MvaI | CCWGG | 3 cut(s) | 968, 1718, 2207 |
| MvnI | CGCG | 3 cut(s) | 79, 195, 297 |
| NciI | CCSGG | 1 cut(s) | 214 |
| NcoI | CCATGG | 1 cut(s) | 107 |
| NdeI | CATATG | 2 cut(s) | 561, 1168 |
| NdeII | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| NlaIII | CATG | 9 cut(s) | 73, 111, 776, 929, 998, 1488, 1493, 1547, 1842 |
| NlaIV | GGNNCC | 8 cut(s) | 211, 212, 232, 1411, 1677, 2182, 2202, 2330 |
| NmeAIII | GCCGAG | 1 cut(s) | 388 |
| NmuCI | GTSAC | 5 cut(s) | 61, 163, 615, 1492, 2209 |
| NspI | RCATGY | 1 cut(s) | 1488 |
| PaeI | GCATGC | 1 cut(s) | 1488 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1914 |
| PfeI | GAWTC | 7 cut(s) | 224, 337, 759, 779, 1640, 1667, 2189 |
| PflFI | GACNNNGTC | 1 cut(s) | 457 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 728, 1011, 1790, 2343 |
| PleI | GAGTC | 7 cut(s) | 167, 256, 847, 1071, 1679, 1811, 2071 |
| PpsI | GAGTC | 7 cut(s) | 167, 256, 847, 1071, 1679, 1811, 2071 |
| PpuMI | RGGWCCY | 2 cut(s) | 210, 658 |
| PsiI | TTATAA | 1 cut(s) | 2220 |
| Psp124BI | GAGCTC | 1 cut(s) | 606 |
| Psp1406I | AACGTT | 1 cut(s) | 1952 |
| Psp5II | RGGWCCY | 2 cut(s) | 210, 658 |
| Psp6I | CCWGG | 3 cut(s) | 966, 1716, 2205 |
| PspEI | GGTNACC | 2 cut(s) | 615, 2209 |
| PspGI | CCWGG | 3 cut(s) | 966, 1716, 2205 |
| PspN4I | GGNNCC | 8 cut(s) | 211, 212, 232, 1411, 1677, 2182, 2202, 2330 |
| PspPI | GGNCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| PspPPI | RGGWCCY | 2 cut(s) | 210, 658 |
| PstI | CTGCAG | 1 cut(s) | 2274 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1670, 1790 |
| PsyI | GACNNNGTC | 1 cut(s) | 457 |
| PvuII | CAGCTG | 1 cut(s) | 1937 |
| RsaI | GTAC | 5 cut(s) | 329, 689, 898, 1054, 1348 |
| RsaNI | GTAC | 5 cut(s) | 328, 688, 897, 1053, 1347 |
| RseI | CAYNNNNRTG | 4 cut(s) | 68, 926, 1179, 2071 |
| SacI | GAGCTC | 1 cut(s) | 606 |
| SacII | CCGCGG | 1 cut(s) | 298 |
| SaqAI | TTAA | 4 cut(s) | 681, 957, 1896, 2145 |
| Sau3AI | GATC | 9 cut(s) | 313, 523, 749, 1171, 1478, 1660, 1780, 2062, 2353 |
| Sau96I | GGNCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| ScaI | AGTACT | 1 cut(s) | 1348 |
| SchI | GAGTC | 7 cut(s) | 167, 256, 848, 1072, 1679, 1811, 2071 |
| ScrFI | CCNGG | 4 cut(s) | 214, 968, 1718, 2207 |
| SduI | GDGCHC | 5 cut(s) | 606, 994, 2153, 2205, 2240 |
| SfaNI | GCATC | 3 cut(s) | 1009, 1972, 2042 |
| SfcI | CTRYAG | 1 cut(s) | 2270 |
| Sfr303I | CCGCGG | 1 cut(s) | 298 |
| SgrBI | CCGCGG | 1 cut(s) | 298 |
| SinI | GGWCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 68, 926, 1179, 2071 |
| SmlI | CTYRAG | 3 cut(s) | 662, 1209, 2144 |
| SmoI | CTYRAG | 3 cut(s) | 662, 1209, 2144 |
| SphI | GCATGC | 1 cut(s) | 1488 |
| SspI | AATATT | 1 cut(s) | 868 |
| SspMI | CTAG | 7 cut(s) | 206, 503, 942, 1197, 1583, 1851, 1904 |
| SstI | GAGCTC | 1 cut(s) | 606 |
| StyD4I | CCNGG | 4 cut(s) | 212, 966, 1716, 2205 |
| StyI | CCWWGG | 3 cut(s) | 107, 420, 1160 |
| TaaI | ACNGT | 7 cut(s) | 327, 459, 484, 1409, 1604, 2242, 2278 |
| TaiI | ACGT | 4 cut(s) | 165, 850, 1365, 1955 |
| TaqI | TCGA | 7 cut(s) | 100, 279, 312, 600, 786, 1553, 1683 |
| TatI | WGTACW | 2 cut(s) | 1052, 1346 |
| TauI | GCSGC | 6 cut(s) | 41, 47, 147, 271, 391, 394 |
| TfiI | GAWTC | 7 cut(s) | 224, 337, 759, 779, 1640, 1667, 2189 |
| Tru1I | TTAA | 4 cut(s) | 681, 957, 1896, 2145 |
| Tru9I | TTAA | 4 cut(s) | 681, 957, 1896, 2145 |
| TscAI | CASTG | 1 cut(s) | 2321 |
| TseFI | GTSAC | 5 cut(s) | 61, 163, 615, 1492, 2209 |
| TseI | GCWGC | 4 cut(s) | 41, 307, 394, 872 |
| Tsp45I | GTSAC | 5 cut(s) | 61, 163, 615, 1492, 2209 |
| TspDTI | ATGAA | 5 cut(s) | 914, 1740, 1923, 1941, 2374 |
| TspGWI | ACGGA | 1 cut(s) | 1056 |
| TspRI | CASTG | 1 cut(s) | 2321 |
| Tth111I | GACNNNGTC | 1 cut(s) | 457 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 728, 1011, 1790, 2343 |
| Vha464I | CTTAAG | 1 cut(s) | 2144 |
| VpaK11BI | GGWCC | 7 cut(s) | 210, 230, 299, 658, 769, 1190, 1214 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 90, 665 |
| XapI | RAATTY | 5 cut(s) | 440, 589, 650, 1149, 1567 |
| XceI | RCATGY | 1 cut(s) | 1488 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2340 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1914 |
| XspI | CTAG | 7 cut(s) | 206, 503, 942, 1197, 1583, 1851, 1904 |
| ZrmI | AGTACT | 1 cut(s) | 1348 |