Rh6CG408100

Carbon catabolite repressor protein 4 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0005330
Physical Location & Seq
Reverse (-)
59349207 .. 59354789
5583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG408100.1

Sequence Viewer

Length: 2403 bp
ATGAAGCGCCCTCCTCCTCCTCTTCAATACGTCGTCGTTTTAGCCACACGCGCCACCGCAATGTCTTCTCGCCCTCCCTTTCGAGGCGGACGGAACCAATGGAAGAGAGGCTACTCGAATCGTCCGTTTTCCGGCGGCGACAGAGCTCAGTACGTCACCGGAGACTCGCACATCCGGTCGGTCCAGGACGCCAATCTCGGATTCCGGCAAGGCGACGCCGGAAGCTTTACCAACCAACCCGGTCATCACCGTCCGTTTAGTCAGAACAATCAGTTCCGCCGACCTCCGCCGGCGGATCACAGCCAACACTACCGGCCTCACCAGCAATTCCGGCCACCTCAGCAGTCGCGGCAGCGGCATCAGAAGCCGTTGGATTATCGGAATTGGGAGTGTGCCAAAACCACACTGCCCTCTAATTCTGAGAAGTTTATAGTGCTTTCTTATAATATACTGGCTGATTACTTGGCCAATGGCCACCGGAGTAAGCTTTACTATCACATTCCCCGGCATATGATGGACTGGCAATGGAGGAAGAAGAATTTGATTTTCGAGCTTGGCTTGTGGTCAGCTGACATAATGTGCCTTCAGGAGGTTGATAGATTTCAGGAACTTCAGGACGAGTTGAGGCCTCGGGGGTACAGTGGCATATGGAAGATGCGAACTGGCAATCCAGTAGATGGCTGTGCGGTTTTTTGGCGGTCATCAAGGTTTAAGCTGCTTCATGAGGAATGCATTGAGTTCAATAAGCTTGGTCTTCGGGATAATGTTGCTCAGATATGTGTGCTGGAGTCGTTGCGTCAAACTTCCAAGGAAAATAATGCAGCTCTACCAACAAGCTCACCAGATTCTAATAAAGTTGTTATTTGTAACATTCATGTTCTTTATAATCCTGGACGAGGAGAAATTAAGCTTGGGCAGGTCAGGGTGCTCCTGGATAAGGCTTGTGCTGTTTCCAAATTGTGGAATGATGCTCCCATTGTTCTTTGTGGGGATTTCAATTGTACTCCAAAGAGTCCATTATATAACTTTATTTCAGAGCAGAAGTTAGATTTGTCTGAAGTGGACAGAGATAAGGTATCAGGGCAAGCTTCAGCTGAAATTGGTCCACCTAGGTCATTTAATCCTAATTATAGGGGTCAGCATGCTAGTAATTTCGTTCAAGGTTCACCAATGGTAGAATGGAAGGAAGTTAACATAAACATGAATGATTTAACCTCGGATCCACAGAACCTGAATAATCCAGAGAGCAGTGTGGAGGATGCCGGTGGGCATGATGCTGAAGCAAACCTGGAATCTAAGCAGAATGCTGTGGATGTCTGTAAGGTTGAAACTGGATCAGCTTTCCATGTTCAGGGTGATGGATTTGAGGAACATCCAAGTGATGGTGACTTGTCTGTAAATTTGAGTGATGAGTTTCATAATTGTTCTCCTGCAGTATCTTCCAATTCTGAAAAGGTTAACTCTGATGTGACTGACATTAGATACAAAGACAGTGTGGAGTACACCTCTAATTCAAATGATGACTCAAATGTTTGTGTAGAAAGAGAAAGCATGAACTGTAGTATCCTTAAACTTTCCTCTACAAAGGACAATGTAACTACTGGCGAGGGTTGTGATACAAATTATGTGGATCCTTTCAGCTCTAAAACTCCTTCGTCTGAGGTCTCTGGTCAGACTTCGTTTGCTGATGCTACTGAAGGCCCCCGATTGGGGAACTTGAGACATTTTCCATCCAAAGAAATTTCTGTTGTTGAGAAGTCAGCCCAACATGAAGTCAATATCACAAGTGCATCTACTAGTGTTGACTTTGAAGTGCAGAAAAATTTGGAAAAAATGTCTCTTACTGAGCTTGATGAAGCCATACCAAAAGGTGGAAACACAGTTGAAGATGATAGTACATTTTTATCTGCATTACACAACACTGGAGATGGCTTCGCATCTGATTTTGCTTCTGATCCTCCTAAGTACATGTTGCCTGCATCAACCGATAGGATTGAGGATGAATTATCTCCAGGATTGGATTCAGAGACAGTTGGTGTGGAGAAAACTATCTATGATCCATCACTATGGACTCCAATGGAGATAGAAACTGCTACAGGCTATGGGGAGTGCACTGTTTTAGAACATCCTTTGAAGCTTAAGAGCACATATACTGAAGTTGAGGATTGTACTGGGACTAGGGACTCAAATGGAGAGCCCCTGGTGACCAGTTATAATAGGTGTTTCTTCGGGACAGTTGATTACATCTGGCGATCTGAAGGTCTGCAAACTGTCAGGGTCCTTGCTCCAATTCCAAAACATGCTATGCAATGGACTTCAGGATTCCCAACCAGGAAATGGGGTAGCGATCACATTGCCTTGGCTACTGAGTTGGTGTTCATGAAGTGCTCTGACCAGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exo_endo_phos

Protein Analysis

800

Amino Acids

89.53

Weight (kDa)

5.48

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos PF03372 188 - 376 8.1e-10 Endonuclease/Exonuclease/phosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 444, 885, 2214
Acc36I ACCTGC 1 cut(s) 907
AccB7I CCANNNNNTGG 5 cut(s) 677, 960, 1382, 1871, 2337
AccII CGCG 2 cut(s) 51, 349
AclWI GGATC 8 cut(s) 303, 1214, 1227, 1342, 1625, 1638, 1949, 2051
AcoI YGGCCR 3 cut(s) 332, 465, 472
AcsI RAATTY 4 cut(s) 538, 1399, 1740, 1822
AcuI CTGAAG 9 cut(s) 569, 596, 1074, 1077, 1299, 1716, 2175, 2277, 2301
AcyI GRCGYC 2 cut(s) 189, 216
AfaI GTAC 7 cut(s) 152, 638, 1003, 1502, 1897, 1967, 2170
AflII CTTAAG 1 cut(s) 2138
AflIII ACRYGT 1 cut(s) 1968
AgsI TTSAA 9 cut(s) 26, 742, 997, 1160, 1328, 1515, 1811, 1886, 2134
AhlI ACTAGT 1 cut(s) 1796
AjnI CCWGG 7 cut(s) 183, 889, 930, 1287, 2011, 2199, 2330
AjuI GAANNNNNNNTTGG 4 cut(s) 185, 217, 894, 926
AloI GAACNNNNNNTCC 2 cut(s) 652, 684
Alw21I GWGCWC 5 cut(s) 148, 930, 2114, 2147, 2390
Alw26I GTCTC 5 cut(s) 156, 1669, 1714, 1842, 2021
Alw44I GTGCAC 1 cut(s) 2110
AlwI GGATC 8 cut(s) 303, 1214, 1227, 1342, 1625, 1638, 1949, 2051
AlwNI CAGNNNCTG 1 cut(s) 1231
Ama87I CYCGRG 1 cut(s) 630
AoxI GGCC 6 cut(s) 314, 332, 465, 472, 626, 1699
ApaLI GTGCAC 1 cut(s) 2110
ApeKI GCWGC 3 cut(s) 352, 715, 821
ApoI RAATTY 4 cut(s) 538, 1399, 1740, 1822
AspA2I CCTAGG 1 cut(s) 1109
AspLEI GCGC 2 cut(s) 9, 53
AspS9I GGNCC 4 cut(s) 181, 1103, 1700, 2278
AsuC2I CCSGG 2 cut(s) 240, 505
AsuHPI GGTGA 8 cut(s) 148, 239, 311, 831, 1158, 1367, 1397, 2215
AvaI CYCGRG 1 cut(s) 630
AvaII GGWCC 3 cut(s) 181, 1103, 2278
AvrII CCTAGG 1 cut(s) 1109
BaeGI GKGCMC 1 cut(s) 2114
BaeI ACNNNNGTAYC 2 cut(s) 1546, 1579
BalI TGGCCA 2 cut(s) 467, 474
BamHI GGATCC 2 cut(s) 1219, 1630
BanII GRGCYC 2 cut(s) 148, 2199
BarI GAAGNNNNNNTAC 2 cut(s) 95, 127
BbsI GAAGAC 2 cut(s) 57, 746
Bbv12I GWGCWC 5 cut(s) 148, 930, 2114, 2147, 2390
BbvCI CCTCAGC 1 cut(s) 339
BbvI GCAGC 3 cut(s) 364, 702, 833
BccI CCATC 7 cut(s) 508, 671, 1352, 1376, 1738, 1922, 2068
BceAI ACGGC 1 cut(s) 352
BcgI CGANNNNNNTGC 2 cut(s) 2336, 2370
BciT130I CCWGG 7 cut(s) 185, 891, 932, 1289, 2013, 2201, 2332
BciVI GTATCC 1 cut(s) 1574
BcnI CCSGG 2 cut(s) 240, 505
BcoDI GTCTC 5 cut(s) 156, 1669, 1714, 1842, 2021
BcuI ACTAGT 1 cut(s) 1796
BfaI CTAG 4 cut(s) 1110, 1146, 1797, 2178
BfmI CTRYAG 3 cut(s) 1431, 1558, 2094
BfoI RGCGCY 1 cut(s) 10
BfrI CTTAAG 1 cut(s) 2138
BfuAI ACCTGC 1 cut(s) 907
BfuI GTATCC 1 cut(s) 1574
BisI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
BlnI CCTAGG 1 cut(s) 1109
BlsI GCNGC 6 cut(s) 137, 351, 354, 357, 717, 823
Bme1390I CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 2013, 2201, 2332
Bme18I GGWCC 3 cut(s) 181, 1103, 2278
BmeT110I CYCGRG 1 cut(s) 630
BmgT120I GGNCC 4 cut(s) 181, 1103, 1700, 2278
BmiI GGNNCC 5 cut(s) 95, 1221, 1632, 1702, 2279
BmrFI CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 2013, 2201, 2332
BmrI ACTGGG 1 cut(s) 2181
BmsI GCATC 9 cut(s) 367, 645, 958, 1249, 1264, 1678, 1799, 1946, 1988
BmuI ACTGGG 1 cut(s) 2181
BpiI GAAGAC 2 cut(s) 57, 746
BplI GAGNNNNNCTC 2 cut(s) 1490, 1522
BpmI CTGGAG 3 cut(s) 806, 1944, 1995
Bpu10I CCTNAGC 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 1738
BpuMI CCSGG 2 cut(s) 240, 505
BsaHI GRCGYC 2 cut(s) 189, 216
BsaI GGTCTC 1 cut(s) 1669
BsaJI CCNNGG 7 cut(s) 503, 629, 807, 1109, 1215, 2199, 2358
BsaWI WCCGGW 3 cut(s) 158, 174, 477
Bse118I RCCGGY 3 cut(s) 289, 312, 1262
Bse3DI GCAATG 4 cut(s) 66, 530, 2315, 2352
BseBI CCWGG 7 cut(s) 185, 891, 932, 1289, 2013, 2201, 2332
BseDI CCNNGG 7 cut(s) 503, 629, 807, 1109, 1215, 2199, 2358
BseGI GGATG 7 cut(s) 171, 1264, 1318, 1372, 1730, 2005, 2125
BseMI GCAATG 4 cut(s) 66, 530, 2315, 2352
BseMII CTCAG 7 cut(s) 161, 353, 411, 785, 1650, 1836, 2358
BseRI GAGGAG 3 cut(s) 6, 9, 912
BseSI GKGCMC 1 cut(s) 2114
BseXI GCAGC 3 cut(s) 364, 702, 833
BsgI GTGCAG 1 cut(s) 1835
Bsh1236I CGCG 2 cut(s) 51, 349
Bsh1285I CGRYCG 1 cut(s) 179
BshFI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1701
BsiEI CGRYCG 1 cut(s) 179
BsiHKAI GWGCWC 5 cut(s) 148, 930, 2114, 2147, 2390
BsiHKCI CYCGRG 1 cut(s) 630
BslFI GGGAC 3 cut(s) 2188, 2195, 2245
BsmAI GTCTC 5 cut(s) 156, 1669, 1714, 1842, 2021
BsmFI GGGAC 3 cut(s) 2188, 2195, 2245
BsmI GAATGC 2 cut(s) 734, 1309
BsnI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1701
Bso31I GGTCTC 1 cut(s) 1669
BsoBI CYCGRG 1 cut(s) 630
Bsp1286I GDGCHC 6 cut(s) 148, 930, 2114, 2147, 2199, 2390
Bsp143I GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
BspANI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1701
BspCNI CTCAG 7 cut(s) 160, 352, 412, 784, 1651, 1837, 2359
BspFNI CGCG 2 cut(s) 51, 349
BspHI TCATGA 2 cut(s) 721, 2379
BspLI GGNNCC 5 cut(s) 95, 1221, 1632, 1702, 2279
BspMAI CTGCAG 1 cut(s) 1435
BspMI ACCTGC 1 cut(s) 907
BspPI GGATC 8 cut(s) 303, 1214, 1227, 1342, 1625, 1638, 1949, 2051
BspTI CTTAAG 1 cut(s) 2138
BspTNI GGTCTC 1 cut(s) 1669
BsrDI GCAATG 4 cut(s) 66, 530, 2315, 2352
BsrFI RCCGGY 3 cut(s) 289, 312, 1262
BssAI RCCGGY 3 cut(s) 289, 312, 1262
BssECI CCNNGG 7 cut(s) 503, 629, 807, 1109, 1215, 2199, 2358
BssMI GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
BssNI GRCGYC 2 cut(s) 189, 216
BssT1I CCWWGG 3 cut(s) 807, 1109, 2358
Bst2UI CCWGG 7 cut(s) 185, 891, 932, 1289, 2013, 2201, 2332
Bst4CI ACNGT 9 cut(s) 251, 641, 1493, 1559, 1882, 2032, 2116, 2236, 2272
Bst6I CTCTTC 2 cut(s) 27, 98
BstACI GRCGYC 2 cut(s) 189, 216
BstAFI CTTAAG 1 cut(s) 2138
BstC8I GCNNGC 4 cut(s) 291, 1086, 1143, 1977
BstDEI CTNAG 9 cut(s) 147, 339, 420, 771, 1296, 1659, 1845, 1962, 2367
BstEII GGTNACC 1 cut(s) 2203
BstENI CCTNNNNNAGG 3 cut(s) 587, 894, 935
BstF5I GGATG 7 cut(s) 171, 1264, 1318, 1372, 1730, 2005, 2125
BstFNI CGCG 2 cut(s) 51, 349
BstH2I RGCGCY 1 cut(s) 10
BstHHI GCGC 2 cut(s) 9, 53
BstKTI GATC 8 cut(s) 298, 1222, 1337, 1633, 1957, 2059, 2255, 2350
BstMAI GTCTC 5 cut(s) 156, 1669, 1714, 1842, 2021
BstMBI GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
BstMCI CGRYCG 1 cut(s) 179
BstMWI GCNNNNNNNGC 7 cut(s) 50, 322, 331, 340, 349, 355, 364
BstNI CCWGG 7 cut(s) 185, 891, 932, 1289, 2013, 2201, 2332
BstNSI RCATGY 3 cut(s) 1145, 1972, 2303
BstPI GGTNACC 1 cut(s) 2203
BstSCI CCNGG 9 cut(s) 183, 238, 503, 889, 930, 1287, 2011, 2199, 2330
BstSFI CTRYAG 3 cut(s) 1431, 1558, 2094
BstSLI GKGCMC 1 cut(s) 2114
BstUI CGCG 2 cut(s) 51, 349
BstV1I GCAGC 3 cut(s) 364, 702, 833
BstV2I GAAGAC 2 cut(s) 57, 746
BstX2I RGATCY 2 cut(s) 1219, 1630
BstXI CCANNNNNNTGG 1 cut(s) 2067
BstYI RGATCY 2 cut(s) 1219, 1630
BsuI GTATCC 1 cut(s) 1574
BsuRI GGCC 6 cut(s) 316, 334, 467, 474, 628, 1701
BtsCI GGATG 7 cut(s) 171, 1264, 1318, 1372, 1730, 2005, 2125
BtsI GCAGTG 2 cut(s) 404, 1255
BtsIMutI CAGTG 6 cut(s) 404, 646, 1255, 1498, 1920, 2112
BveI ACCTGC 1 cut(s) 907
Cac8I GCNNGC 4 cut(s) 291, 1086, 1143, 1977
CaiI CAGNNNCTG 1 cut(s) 1231
CciI TCATGA 2 cut(s) 721, 2379
CfoI GCGC 2 cut(s) 9, 53
Cfr10I RCCGGY 3 cut(s) 289, 312, 1262
Cfr13I GGNCC 4 cut(s) 181, 1103, 1700, 2278
CseI GACGC 3 cut(s) 197, 224, 785
Csp6I GTAC 7 cut(s) 151, 637, 1002, 1501, 1896, 1966, 2169
CspCI CAANNNNNGTGG 2 cut(s) 1608, 1643
CviQI GTAC 7 cut(s) 151, 637, 1002, 1501, 1896, 1966, 2169
DdeI CTNAG 9 cut(s) 147, 339, 420, 771, 1296, 1659, 1845, 1962, 2367
DpnI GATC 8 cut(s) 297, 1221, 1336, 1632, 1956, 2058, 2254, 2349
DpnII GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
EaeI YGGCCR 3 cut(s) 332, 465, 472
Eam1104I CTCTTC 2 cut(s) 27, 98
EarI CTCTTC 2 cut(s) 27, 98
EciI GGCGGA 4 cut(s) 102, 266, 276, 308
Ecl136II GAGCTC 1 cut(s) 146
Eco130I CCWWGG 3 cut(s) 807, 1109, 2358
Eco147I AGGCCT 1 cut(s) 628
Eco24I GRGCYC 2 cut(s) 148, 2199
Eco31I GGTCTC 1 cut(s) 1669
Eco47I GGWCC 3 cut(s) 181, 1103, 2278
Eco53kI GAGCTC 1 cut(s) 146
Eco57I CTGAAG 9 cut(s) 569, 596, 1074, 1077, 1299, 1716, 2175, 2277, 2301
Eco88I CYCGRG 1 cut(s) 630
Eco91I GGTNACC 1 cut(s) 2203
EcoICRI GAGCTC 1 cut(s) 146
EcoNI CCTNNNNNAGG 3 cut(s) 587, 894, 935
EcoO109I RGGNCCY 2 cut(s) 1700, 2278
EcoO65I GGTNACC 1 cut(s) 2203
EcoRII CCWGG 7 cut(s) 183, 889, 930, 1287, 2011, 2199, 2330
EcoT14I CCWWGG 3 cut(s) 807, 1109, 2358
EcoT22I ATGCAT 1 cut(s) 734
EcoT38I GRGCYC 2 cut(s) 148, 2199
ErhI CCWWGG 3 cut(s) 807, 1109, 2358
FaqI GGGAC 3 cut(s) 2188, 2195, 2245
FauNDI CATATG 2 cut(s) 510, 647
Fnu4HI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
FokI GGATG 7 cut(s) 158, 1271, 1325, 1359, 1717, 2012, 2112
FriOI GRGCYC 2 cut(s) 148, 2199
Fsp4HI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
FspBI CTAG 4 cut(s) 1110, 1146, 1797, 2178
GlaI GCGC 2 cut(s) 8, 52
GluI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
GsuI CTGGAG 3 cut(s) 806, 1944, 1995
HaeII RGCGCY 1 cut(s) 10
HaeIII GGCC 6 cut(s) 316, 334, 467, 474, 628, 1701
HgaI GACGC 3 cut(s) 197, 224, 785
HhaI GCGC 2 cut(s) 9, 53
Hin1I GRCGYC 2 cut(s) 189, 216
Hin6I GCGC 2 cut(s) 7, 51
HinP1I GCGC 2 cut(s) 7, 51
HincII GTYRAC 3 cut(s) 1192, 1459, 1804
HindII GTYRAC 3 cut(s) 1192, 1459, 1804
HindIII AAGCTT 6 cut(s) 223, 485, 746, 908, 1086, 2135
HpaI GTTAAC 2 cut(s) 1192, 1459
HphI GGTGA 8 cut(s) 148, 239, 311, 831, 1158, 1367, 1397, 2215
Hpy166II GTNNAC 8 cut(s) 1063, 1106, 1166, 1192, 1459, 1503, 1804, 2112
Hpy188III TCNNGA 9 cut(s) 587, 605, 614, 722, 758, 1241, 2230, 2319, 2380
Hpy8I GTNNAC 8 cut(s) 1063, 1106, 1166, 1192, 1459, 1503, 1804, 2112
Hpy99I CGWCG 3 cut(s) 35, 38, 218
HpyAV CCTTC 5 cut(s) 593, 1177, 1662, 1691, 2252
HpyCH4III ACNGT 9 cut(s) 251, 641, 1493, 1559, 1882, 2032, 2116, 2236, 2272
HpyCH4IV ACGT 2 cut(s) 30, 153
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 322, 331, 340, 349, 355, 364
HpyF3I CTNAG 9 cut(s) 147, 339, 420, 771, 1296, 1659, 1845, 1962, 2367
HpySE526I ACGT 2 cut(s) 30, 153
Hsp92I GRCGYC 2 cut(s) 189, 216
HspAI GCGC 2 cut(s) 7, 51
KroI GCCGGC 1 cut(s) 289
KroNI GCCGGC 1 cut(s) 291
KspAI GTTAAC 2 cut(s) 1192, 1459
Kzo9I GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
LmnI GCTCC 3 cut(s) 933, 976, 2290
Lsp1109I GCAGC 3 cut(s) 364, 702, 833
LweI GCATC 9 cut(s) 367, 645, 958, 1249, 1264, 1678, 1799, 1946, 1988
MaeI CTAG 4 cut(s) 1110, 1146, 1797, 2178
MaeII ACGT 2 cut(s) 30, 153
MaeIII GTNAC 6 cut(s) 154, 866, 1385, 1468, 1594, 2203
MalI GATC 8 cut(s) 297, 1221, 1336, 1632, 1956, 2058, 2254, 2349
MboI GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
MfeI CAATTG 1 cut(s) 997
MflI RGATCY 2 cut(s) 1219, 1630
MhlI GDGCHC 6 cut(s) 148, 930, 2114, 2147, 2199, 2390
MlsI TGGCCA 2 cut(s) 467, 474
MluNI TGGCCA 2 cut(s) 467, 474
MlyI GAGTC 6 cut(s) 158, 797, 1021, 1517, 2065, 2177
MmeI TCCRAC 1 cut(s) 351
Mox20I TGGCCA 2 cut(s) 467, 474
Mph1103I ATGCAT 1 cut(s) 734
MreI CGCCGGCG 1 cut(s) 289
MroNI GCCGGC 1 cut(s) 289
MscI TGGCCA 2 cut(s) 467, 474
MseI TTAA 8 cut(s) 711, 906, 1119, 1191, 1211, 1458, 1569, 2139
MslI CAYNNNNRTG 4 cut(s) 59, 1199, 1377, 2065
Msp20I TGGCCA 2 cut(s) 467, 474
MspA1I CMGCKG 3 cut(s) 355, 569, 1094
MspCI CTTAAG 1 cut(s) 2138
MspR9I CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 2013, 2201, 2332
MunI CAATTG 1 cut(s) 997
Mva1269I GAATGC 2 cut(s) 734, 1309
MvaI CCWGG 7 cut(s) 185, 891, 932, 1289, 2013, 2201, 2332
MvnI CGCG 2 cut(s) 51, 349
MwoI GCNNNNNNNGC 7 cut(s) 50, 322, 331, 340, 349, 355, 364
NaeI GCCGGC 1 cut(s) 291
NciI CCSGG 2 cut(s) 240, 505
NdeI CATATG 2 cut(s) 510, 647
NdeII GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
NgoMIV GCCGGC 1 cut(s) 289
NlaIV GGNNCC 5 cut(s) 95, 1221, 1632, 1702, 2279
NmuCI GTSAC 4 cut(s) 154, 1385, 1468, 2203
NsiI ATGCAT 1 cut(s) 734
NspI RCATGY 3 cut(s) 1145, 1972, 2303
PaeI GCATGC 1 cut(s) 1145
PagI TCATGA 2 cut(s) 721, 2379
PceI AGGCCT 1 cut(s) 628
PciI ACATGT 1 cut(s) 1968
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PctI GAATGC 2 cut(s) 734, 1309
PdiI GCCGGC 1 cut(s) 291
PfeI GAWTC 6 cut(s) 118, 201, 845, 1292, 2021, 2322
PflMI CCANNNNNTGG 5 cut(s) 677, 960, 1382, 1871, 2337
PfoI TCCNGGA 4 cut(s) 183, 889, 930, 2011
PkrI GCNGC 6 cut(s) 137, 351, 354, 357, 717, 823
PleI GAGTC 6 cut(s) 158, 796, 1020, 1517, 2065, 2177
PpsI GAGTC 6 cut(s) 158, 796, 1020, 1517, 2065, 2177
PpuMI RGGWCCY 1 cut(s) 2278
PscI ACATGT 1 cut(s) 1968
PsiI TTATAA 3 cut(s) 444, 885, 2214
Psp124BI GAGCTC 1 cut(s) 148
Psp5II RGGWCCY 1 cut(s) 2278
Psp6I CCWGG 7 cut(s) 183, 889, 930, 1287, 2011, 2199, 2330
PspEI GGTNACC 1 cut(s) 2203
PspGI CCWGG 7 cut(s) 183, 889, 930, 1287, 2011, 2199, 2330
PspN4I GGNNCC 5 cut(s) 95, 1221, 1632, 1702, 2279
PspPI GGNCC 4 cut(s) 181, 1103, 1700, 2278
PspPPI RGGWCCY 1 cut(s) 2278
PstI CTGCAG 1 cut(s) 1435
PstNI CAGNNNCTG 1 cut(s) 1231
PsuI RGATCY 2 cut(s) 1219, 1630
PvuII CAGCTG 2 cut(s) 569, 1094
RsaI GTAC 7 cut(s) 152, 638, 1003, 1502, 1897, 1967, 2170
RsaNI GTAC 7 cut(s) 151, 637, 1002, 1501, 1896, 1966, 2169
RseI CAYNNNNRTG 4 cut(s) 59, 1199, 1377, 2065
SacI GAGCTC 1 cut(s) 148
SaqAI TTAA 8 cut(s) 711, 906, 1119, 1191, 1211, 1458, 1569, 2139
SatI GCNGC 6 cut(s) 136, 350, 353, 356, 716, 822
Sau3AI GATC 8 cut(s) 295, 1219, 1334, 1630, 1954, 2056, 2252, 2347
Sau96I GGNCC 4 cut(s) 181, 1103, 1700, 2278
SchI GAGTC 6 cut(s) 158, 797, 1021, 1517, 2065, 2177
ScrFI CCNGG 9 cut(s) 185, 240, 505, 891, 932, 1289, 2013, 2201, 2332
SduI GDGCHC 6 cut(s) 148, 930, 2114, 2147, 2199, 2390
SfaNI GCATC 9 cut(s) 367, 645, 958, 1249, 1264, 1678, 1799, 1946, 1988
SfcI CTRYAG 3 cut(s) 1431, 1558, 2094
SgrAI CRCCGGYG 1 cut(s) 289
SinI GGWCC 3 cut(s) 181, 1103, 2278
SmiMI CAYNNNNRTG 4 cut(s) 59, 1199, 1377, 2065
SmlI CTYRAG 2 cut(s) 1717, 2138
SmoI CTYRAG 2 cut(s) 1717, 2138
SpeI ACTAGT 1 cut(s) 1796
SphI GCATGC 1 cut(s) 1145
SseBI AGGCCT 1 cut(s) 628
SspMI CTAG 4 cut(s) 1110, 1146, 1797, 2178
SstI GAGCTC 1 cut(s) 148
StuI AGGCCT 1 cut(s) 628
StyD4I CCNGG 9 cut(s) 183, 238, 503, 889, 930, 1287, 2011, 2199, 2330
StyI CCWWGG 3 cut(s) 807, 1109, 2358
TaaI ACNGT 9 cut(s) 251, 641, 1493, 1559, 1882, 2032, 2116, 2236, 2272
TaiI ACGT 2 cut(s) 33, 156
TaqI TCGA 3 cut(s) 82, 116, 549
TaqII GACCGA 1 cut(s) 169
TatI WGTACW 5 cut(s) 1001, 1500, 1895, 1965, 2168
TauI GCSGC 3 cut(s) 138, 352, 358
TfiI GAWTC 6 cut(s) 118, 201, 845, 1292, 2021, 2322
Tru1I TTAA 8 cut(s) 711, 906, 1119, 1191, 1211, 1458, 1569, 2139
Tru9I TTAA 8 cut(s) 711, 906, 1119, 1191, 1211, 1458, 1569, 2139
TscAI CASTG 6 cut(s) 411, 646, 1255, 1498, 1927, 2119
TseFI GTSAC 4 cut(s) 154, 1385, 1468, 2203
TseI GCWGC 3 cut(s) 352, 715, 821
Tsp45I GTSAC 4 cut(s) 154, 1385, 1468, 2203
TspGWI ACGGA 3 cut(s) 106, 114, 243
TspRI CASTG 6 cut(s) 411, 646, 1255, 1498, 1927, 2119
Van91I CCANNNNNTGG 5 cut(s) 677, 960, 1382, 1871, 2337
Vha464I CTTAAG 1 cut(s) 2138
VneI GTGCAC 1 cut(s) 2110
VpaK11BI GGWCC 3 cut(s) 181, 1103, 2278
XagI CCTNNNNNAGG 3 cut(s) 587, 894, 935
XapI RAATTY 4 cut(s) 538, 1399, 1740, 1822
XceI RCATGY 3 cut(s) 1145, 1972, 2303
XcmI CCANNNNNNNNNTGG 2 cut(s) 1176, 2334
XmaJI CCTAGG 1 cut(s) 1109
XspI CTAG 4 cut(s) 1110, 1146, 1797, 2178
Zsp2I ATGCAT 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.