Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009041

Physical Location & Seq

Genomic Coordinates Forward (+)

4392937 .. 4397541

Gene Structure 4605 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G13640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGCCCCTTATTCATCGGAAAAAGCCGACGGAGAAACCATCGACGCCGCCATCTGAAGAGGTGGTGCACGATGAGGATTCGCAAAAGAAACCACACGAATCTTCCAAATCCCACCATAAGAAATCGAACGGAGGAGGGAAGTGGTCGTGCATCGATTCTTGTTGTTGGTTCATTGGGTGTGTGTGTGTAACCTGGTGGTTTCTTCTCTTCCTTTACAACGCAATGCCTGCGAGCTTCCCTCAGTATGTAACGGAGCGAATCACGGGTCCTTTGCCTGACCCGCCCGGTGTTAAGCTCAAAAAAGAAGGTCTTAAGGCGAAACATCCTGTTGTCTTCATTCCTGGGATTGTCACCGGTGGGCTCGAGCTTTGGGAAGGCAAACAATGCGCTGATGGTTTATTTAGAAAACGTTTGTGGGGTGGAACTTTTGGTGAAGTCTACAAAAGGCCTCTATGTTGGGTGGAACACATGTCACTTGACAATGAAACTGGGTTGGATCCAGCTGGTATTAGAGTTCGAGCTGTATCAGGACTCGTGGCTGCTGACTACTTTGCTCCTGGCTACTTTGTCTGGGCAGTGCTGATTGCTAACCTTGCACATATTGGATATGAAGAGAAAAATATGTACATGGCTGCATATGACTGGCGGCTTTCGTTTCAGAACACAGAGGTACGTGATCAGACTCTTAGCCGTATGAAAAGTAATATAGAGTTGATGGTTTCTACCAACGGTGGAAAAAAAGCAGTTATAGTTCCGCATTCCATGGGGGTCTTGTATTTTCTACATTTTATGAAGTGGGTTGAGGCACCAGCTCCTCTGGGTGGCGGGGGTGGGCCAGATTGGTGTGCAAAGTATATTAAGGCGGTGATGAACATTGGTGGACCATTTCTTGGTGTTCCAAAAGCTGTTGCAGGGCTTTTCTCTGCTGAAGCAAAGGATGTTGCAGTTGCCAGAGCGATTGCCCCAGGATTCTTAGACACCGATATATTTAGACTTCAGACCTTGCAGCATGTAATGAGAATGACACGCACATGGGACTCAACAATGTCTATGTTACCGAAGGGAGGTGACACGATATGGGGCGGGCTTGATTGGTCACCGGAGAAAGGCCACACCTGTTGTGGGAAAAAGCAAAAGAACAACGAAACTTGTGGTGAAGCAGGTGAAAACGGAGTTTCCAAGAAAAGTCCTGTTAACTATGGAAGGATGATATCTTTTGGGAAAGAAGTAGCAGAGGCTGCGCCATCTGAGATTAATAATATTGATTTTCGAGGTGCTGTCAAAGGTCAGAGTATCCCAAATCACACCTGTCGTGACGTGTGGACAGAGTACCATGACATGGGAATTGCTGGGATCAAAGCTATCGCTGAGTATAAGGTCTACACTGCTGGTGAAGCTATAGATCTACTACATTATGTTGCTCCTAAGATGATGGCGCGTGGTGCCGCTCATTTCTCTTATGGAATTGCTGATGATTTGGATGACACCAAGTATCAAGATCCCAAATACTGGTCAAATCCGTTAGAGACAAAATTACCGAATGCTCCTGAGATGGAAATCTACTCATTATACGGAGTGGGGATACCAACGGAACGAGCATACGTATACAAGCTTAACCAGTCTCCCGACAGTTGCATCCCCTTTCAGATATTCACTTCTGCTCACGAGGAGGACGAAGATAGCTGTCTGAAAGCAGGAGTTTACAATGTGGATGGGGATGAAACAGTACCCGTCCTAAGTGCCGGGTACATGTGTGCAAAAGCGTGGCGTGGCAAGACAAGATTCAACCCTTCCGGAATCAAGACTTATATAAGAGAATACAATCACTCTCCGCCGGCTAACCTGTTGGAAGGGCGCGGGACGCAGAGTGGTGCCCATGTTGATATCATGGGAAACTTTGCTTTGATCGAAGATATCATGAGGGTTGCCGCCGGAGGTAACGGGTCTGATATAGGACATGACCAGGTCCACTCTGGCATATTTGAATGGTCGGAGCGTATTGACCTGAAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008080 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046027 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 map00561

Pfam Domains

Protein Families

LCAT

Protein Analysis

671

Amino Acids

74.16

Weight (kDa)

6.5

Isoelectric Point (pI)

35.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	134 - 369	3.6e-44	Lecithin:cholesterol acyltransferase
LCAT	PF02450	471 - 631	2e-18	Lecithin:cholesterol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13640 AT5G13640 AT5G13640
fragaria_vesca	FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180
malus_domestica	MD02G1086400.v1.1 MD15G1213500.v1.1
prunus_persica	Prupe.7G203400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0094251
rosa_laevigata	RLG00000016471
rosa_multiflora	Rmu_co8505711.1_g000001 Rmu_sc0002193.1_g000017 Rmu_sc0006198.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147320
rosa_rugosa	Rorug02G0042500
rosa_samantha	Rh2AG090100 Rh2BG090100 Rh2CG092600 Rh2DG089000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1151
Acc36I	ACCTGC	1 cut(s)	1151
AccB1I	GGYRCC	3 cut(s)	805, 1442, 1871
AccB7I	CCANNNNNTGG	3 cut(s)	890, 1339, 1509
AccBSI	CCGCTC	1 cut(s)	1448
AccI	GTMKAC	3 cut(s)	438, 1380, 1605
AccII	CGCG	2 cut(s)	1438, 1857
AccIII	TCCGGA	1 cut(s)	1793
AclI	AACGTT	1 cut(s)	409
AclWI	GGATC	4 cut(s)	491, 504, 1361, 1493
AcuI	CTGAAG	3 cut(s)	75, 948, 980
AcyI	GRCGYC	1 cut(s)	44
AfaI	GTAC	5 cut(s)	626, 672, 1331, 1728, 1748
AfiI	CCNNNNNNNGG	7 cut(s)	821, 890, 1064, 1106, 1122, 1339, 1509
AflII	CTTAAG	1 cut(s)	311
AflIII	ACRYGT	3 cut(s)	468, 1317, 1749
AgeI	ACCGGT	1 cut(s)	353
AgsI	TTSAA	2 cut(s)	1786, 1985
AjiI	CACGTC	1 cut(s)	1318
AjnI	CCWGG	5 cut(s)	191, 340, 556, 964, 1962
Alw21I	GWGCWC	1 cut(s)	69
Alw26I	GTCTC	2 cut(s)	1520, 1626
Alw44I	GTGCAC	1 cut(s)	65
AlwI	GGATC	4 cut(s)	491, 504, 1361, 1493
AlwNI	CAGNNNCTG	1 cut(s)	1238
Ama87I	CYCGRG	1 cut(s)	362
Aor13HI	TCCGGA	1 cut(s)	1793
AoxI	GGCC	3 cut(s)	446, 833, 1108
ApaLI	GTGCAC	1 cut(s)	65
ApeKI	GCWGC	4 cut(s)	539, 632, 1006, 1238
ArsI	GACNNNNNNTTYG	2 cut(s)	250, 282
AseI	ATTAAT	1 cut(s)	1254
AsiGI	ACCGGT	1 cut(s)	353
AspLEI	GCGC	4 cut(s)	389, 1243, 1438, 1857
AspS9I	GGNCC	4 cut(s)	266, 833, 881, 1966
AsuC2I	CCSGG	2 cut(s)	285, 1744
AsuHPI	GGTGA	8 cut(s)	343, 443, 877, 1079, 1089, 1166, 1175, 1403
AvaI	CYCGRG	1 cut(s)	362
AvaII	GGWCC	3 cut(s)	266, 881, 1966
BaeGI	GKGCMC	2 cut(s)	69, 1876
BaeI	ACNNNNGTAYC	2 cut(s)	1738, 1771
BamHI	GGATCC	1 cut(s)	496
BanI	GGYRCC	3 cut(s)	805, 1442, 1871
BanII	GRGCYC	1 cut(s)	363
BauI	CACGAG	2 cut(s)	533, 1664
BbsI	GAAGAC	1 cut(s)	325
Bbv12I	GWGCWC	1 cut(s)	69
BbvI	GCAGC	4 cut(s)	526, 619, 1018, 1225
BccI	CCATC	8 cut(s)	46, 58, 386, 709, 1252, 1426, 1546, 1706
BceAI	ACGGC	1 cut(s)	675
BciT130I	CCWGG	5 cut(s)	193, 342, 558, 966, 1964
BciVI	GTATCC	2 cut(s)	1304, 1575
BclI	TGATCA	1 cut(s)	676
BcnI	CCSGG	2 cut(s)	285, 1744
BcoDI	GTCTC	2 cut(s)	1520, 1626
BfmI	CTRYAG	1 cut(s)	1398
BfrI	CTTAAG	1 cut(s)	311
BfuAI	ACCTGC	1 cut(s)	1151
BfuI	GTATCC	2 cut(s)	1304, 1575
BglII	AGATCT	1 cut(s)	1402
BisI	GCNGC	8 cut(s)	47, 540, 633, 647, 1007, 1239, 1446, 1929
BlsI	GCNGC	8 cut(s)	48, 541, 634, 648, 1008, 1240, 1447, 1930
Bme1390I	CCNGG	7 cut(s)	193, 285, 342, 558, 966, 1744, 1964
Bme18I	GGWCC	3 cut(s)	266, 881, 1966
BmeT110I	CYCGRG	1 cut(s)	362
BmgBI	CACGTC	1 cut(s)	1318
BmgT120I	GGNCC	4 cut(s)	266, 833, 881, 1966
BmiI	GGNNCC	5 cut(s)	267, 498, 807, 1444, 1873
BmrFI	CCNGG	7 cut(s)	193, 285, 342, 558, 966, 1744, 1964
BmrI	ACTGGG	1 cut(s)	498
BmsI	GCATC	2 cut(s)	159, 1644
BmuI	ACTGGG	1 cut(s)	498
BpiI	GAAGAC	1 cut(s)	325
BplI	GAGNNNNNCTC	2 cut(s)	223, 255
BpuMI	CCSGG	2 cut(s)	285, 1744
Bsa29I	ATCGAT	1 cut(s)	153
BsaAI	YACGTR	2 cut(s)	674, 1603
BsaBI	GATNNNNATC	1 cut(s)	1556
BsaHI	GRCGYC	1 cut(s)	44
BsaJI	CCNNGG	3 cut(s)	341, 762, 964
BsaWI	WCCGGW	3 cut(s)	353, 1099, 1793
Bsc4I	CCNNNNNNNGG	7 cut(s)	821, 890, 1064, 1106, 1122, 1339, 1509
Bse118I	RCCGGY	2 cut(s)	353, 1834
Bse1I	ACTGG	4 cut(s)	493, 647, 1514, 1618
Bse3DI	GCAATG	1 cut(s)	228
Bse8I	GATNNNNATC	1 cut(s)	1556
BseAI	TCCGGA	1 cut(s)	1793
BseBI	CCWGG	5 cut(s)	193, 342, 558, 966, 1964
BseCI	ATCGAT	1 cut(s)	153
BseDI	CCNNGG	3 cut(s)	341, 762, 964
BseGI	GGATG	7 cut(s)	322, 943, 1212, 1486, 1635, 1717, 1723
BseJI	GATNNNNATC	1 cut(s)	1556
BseLI	CCNNNNNNNGG	7 cut(s)	821, 890, 1064, 1106, 1122, 1339, 1509
BseMI	GCAATG	1 cut(s)	228
BseMII	CTCAG	4 cut(s)	254, 1239, 1359, 1539
BseNI	ACTGG	4 cut(s)	493, 647, 1514, 1618
BseRI	GAGGAG	3 cut(s)	147, 804, 1682
BseSI	GKGCMC	2 cut(s)	69, 1876
BseXI	GCAGC	4 cut(s)	526, 619, 1018, 1225
BseYI	CCCAGC	1 cut(s)	1349
Bsh1236I	CGCG	2 cut(s)	1438, 1857
BshFI	GGCC	3 cut(s)	448, 835, 1110
BshNI	GGYRCC	3 cut(s)	805, 1442, 1871
BshTI	ACCGGT	1 cut(s)	353
BshVI	ATCGAT	1 cut(s)	153
BsiHKAI	GWGCWC	1 cut(s)	69
BsiHKCI	CYCGRG	1 cut(s)	362
BsiSI	CCGG	7 cut(s)	285, 354, 1100, 1743, 1794, 1835, 1932
BslFI	GGGAC	2 cut(s)	1049, 1873
BslI	CCNNNNNNNGG	7 cut(s)	821, 890, 1064, 1106, 1122, 1339, 1509
BsmAI	GTCTC	2 cut(s)	1520, 1626
BsmFI	GGGAC	2 cut(s)	1049, 1873
BsmI	GAATGC	2 cut(s)	757, 1546
BsnI	GGCC	3 cut(s)	448, 835, 1110
BsoBI	CYCGRG	1 cut(s)	362
Bsp1286I	GDGCHC	3 cut(s)	69, 363, 1876
Bsp13I	TCCGGA	1 cut(s)	1793
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
Bsp19I	CCATGG	1 cut(s)	762
BspANI	GGCC	3 cut(s)	448, 835, 1110
BspCNI	CTCAG	4 cut(s)	253, 1240, 1360, 1540
BspDI	ATCGAT	1 cut(s)	153
BspEI	TCCGGA	1 cut(s)	1793
BspFNI	CGCG	2 cut(s)	1438, 1857
BspHI	TCATGA	1 cut(s)	1917
BspLI	GGNNCC	5 cut(s)	267, 498, 807, 1444, 1873
BspMI	ACCTGC	1 cut(s)	1151
BspPI	GGATC	4 cut(s)	491, 504, 1361, 1493
BspT107I	GGYRCC	3 cut(s)	805, 1442, 1871
BspTI	CTTAAG	1 cut(s)	311
BsrBI	CCGCTC	1 cut(s)	1448
BsrDI	GCAATG	1 cut(s)	228
BsrFI	RCCGGY	2 cut(s)	353, 1834
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	4 cut(s)	493, 647, 1514, 1618
BssAI	RCCGGY	2 cut(s)	353, 1834
BssECI	CCNNGG	3 cut(s)	341, 762, 964
BssMI	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
BssNAI	GTATAC	1 cut(s)	1606
BssNI	GRCGYC	1 cut(s)	44
BssSI	CACGAG	2 cut(s)	533, 1664
BssT1I	CCWWGG	1 cut(s)	762
Bst1107I	GTATAC	1 cut(s)	1606
Bst2BI	CACGAG	2 cut(s)	533, 1664
Bst2UI	CCWGG	5 cut(s)	193, 342, 558, 966, 1964
Bst4CI	ACNGT	3 cut(s)	731, 1631, 1726
Bst6I	CTCTTC	3 cut(s)	51, 212, 606
BstACI	GRCGYC	1 cut(s)	44
BstAFI	CTTAAG	1 cut(s)	311
BstAPI	GCANNNNNTGC	3 cut(s)	227, 384, 1238
BstAUI	TGTACA	1 cut(s)	624
BstBAI	YACGTR	2 cut(s)	674, 1603
BstC8I	GCNNGC	4 cut(s)	228, 232, 1085, 1836
BstDEI	CTNAG	8 cut(s)	240, 686, 973, 1248, 1368, 1425, 1548, 1736
BstDSI	CCRYGG	1 cut(s)	762
BstEII	GGTNACC	1 cut(s)	1095
BstF5I	GGATG	7 cut(s)	322, 943, 1212, 1486, 1635, 1717, 1723
BstFNI	CGCG	2 cut(s)	1438, 1857
BstHHI	GCGC	4 cut(s)	389, 1243, 1438, 1857
BstKTI	GATC	6 cut(s)	499, 679, 1356, 1405, 1501, 1908
BstMAI	GTCTC	2 cut(s)	1520, 1626
BstMBI	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
BstMWI	GCNNNNNNNGC	8 cut(s)	227, 280, 384, 593, 1238, 1394, 1442, 1861
BstNI	CCWGG	5 cut(s)	193, 342, 558, 966, 1964
BstNSI	RCATGY	3 cut(s)	472, 1013, 1753
BstPI	GGTNACC	1 cut(s)	1095
BstSCI	CCNGG	7 cut(s)	191, 283, 340, 556, 964, 1742, 1962
BstSFI	CTRYAG	1 cut(s)	1398
BstSLI	GKGCMC	2 cut(s)	69, 1876
BstSNI	TACGTA	1 cut(s)	1603
BstUI	CGCG	2 cut(s)	1438, 1857
BstV1I	GCAGC	4 cut(s)	526, 619, 1018, 1225
BstV2I	GAAGAC	1 cut(s)	325
BstX2I	RGATCY	3 cut(s)	496, 1402, 1498
BstYI	RGATCY	3 cut(s)	496, 1402, 1498
BstZ17I	GTATAC	1 cut(s)	1606
Bsu15I	ATCGAT	1 cut(s)	153
BsuI	GTATCC	2 cut(s)	1304, 1575
BsuRI	GGCC	3 cut(s)	448, 835, 1110
BsuTUI	ATCGAT	1 cut(s)	153
BtgI	CCRYGG	1 cut(s)	762
BtrI	CACGTC	1 cut(s)	1318
BtsCI	GGATG	7 cut(s)	322, 943, 1212, 1486, 1635, 1717, 1723
BtsI	GCAGTG	2 cut(s)	582, 1383
BtsIMutI	CAGTG	2 cut(s)	582, 1383
BveI	ACCTGC	1 cut(s)	1151
Cac8I	GCNNGC	4 cut(s)	228, 232, 1085, 1836
CaiI	CAGNNNCTG	1 cut(s)	1238
CciI	TCATGA	1 cut(s)	1917
CfoI	GCGC	4 cut(s)	389, 1243, 1438, 1857
Cfr10I	RCCGGY	2 cut(s)	353, 1834
Cfr13I	GGNCC	4 cut(s)	266, 833, 881, 1966
ClaI	ATCGAT	1 cut(s)	153
CseI	GACGC	2 cut(s)	52, 1870
CsiI	ACCWGGT	2 cut(s)	191, 1962
Csp6I	GTAC	5 cut(s)	625, 671, 1330, 1727, 1747
CspAI	ACCGGT	1 cut(s)	353
CspCI	CAANNNNNGTGG	2 cut(s)	1100, 1135
CviQI	GTAC	5 cut(s)	625, 671, 1330, 1727, 1747
DdeI	CTNAG	8 cut(s)	240, 686, 973, 1248, 1368, 1425, 1548, 1736
DpnI	GATC	6 cut(s)	498, 678, 1355, 1404, 1500, 1907
DpnII	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
Eam1104I	CTCTTC	3 cut(s)	51, 212, 606
EarI	CTCTTC	3 cut(s)	51, 212, 606
EciI	GGCGGA	1 cut(s)	1821
Eco105I	TACGTA	1 cut(s)	1603
Eco130I	CCWWGG	1 cut(s)	762
Eco147I	AGGCCT	1 cut(s)	448
Eco24I	GRGCYC	1 cut(s)	363
Eco32I	GATATC	3 cut(s)	1212, 1885, 1915
Eco47I	GGWCC	3 cut(s)	266, 881, 1966
Eco57I	CTGAAG	3 cut(s)	75, 948, 980
Eco88I	CYCGRG	1 cut(s)	362
Eco91I	GGTNACC	1 cut(s)	1095
EcoO109I	RGGNCCY	1 cut(s)	266
EcoO65I	GGTNACC	1 cut(s)	1095
EcoRII	CCWGG	5 cut(s)	191, 340, 556, 964, 1962
EcoRV	GATATC	3 cut(s)	1212, 1885, 1915
EcoT14I	CCWWGG	1 cut(s)	762
EcoT38I	GRGCYC	1 cut(s)	363
ErhI	CCWWGG	1 cut(s)	762
FalI	AAGNNNNNCTT	2 cut(s)	294, 326
FaqI	GGGAC	2 cut(s)	1049, 1873
FauI	CCCGC	4 cut(s)	288, 818, 1076, 1850
FauNDI	CATATG	1 cut(s)	637
FbaI	TGATCA	1 cut(s)	676
FblI	GTMKAC	3 cut(s)	438, 1380, 1605
Fnu4HI	GCNGC	8 cut(s)	47, 540, 633, 647, 1007, 1239, 1446, 1929
FokI	GGATG	7 cut(s)	309, 950, 1219, 1493, 1622, 1724, 1730
FriOI	GRGCYC	1 cut(s)	363
Fsp4HI	GCNGC	8 cut(s)	47, 540, 633, 647, 1007, 1239, 1446, 1929
GlaI	GCGC	4 cut(s)	388, 1242, 1437, 1856
GluI	GCNGC	8 cut(s)	47, 540, 633, 647, 1007, 1239, 1446, 1929
GsaI	CCCAGC	1 cut(s)	1353
HaeIII	GGCC	3 cut(s)	448, 835, 1110
HapII	CCGG	7 cut(s)	285, 354, 1100, 1743, 1794, 1835, 1932
HgaI	GACGC	2 cut(s)	52, 1870
HhaI	GCGC	4 cut(s)	389, 1243, 1438, 1857
Hin1I	GRCGYC	1 cut(s)	44
Hin6I	GCGC	4 cut(s)	387, 1241, 1436, 1855
HinP1I	GCGC	4 cut(s)	387, 1241, 1436, 1855
HincII	GTYRAC	1 cut(s)	1195
HindII	GTYRAC	1 cut(s)	1195
HindIII	AAGCTT	1 cut(s)	1610
HpaI	GTTAAC	1 cut(s)	1195
HpaII	CCGG	7 cut(s)	285, 354, 1100, 1743, 1794, 1835, 1932
HphI	GGTGA	8 cut(s)	343, 443, 877, 1079, 1089, 1166, 1175, 1403
Hpy166II	GTNNAC	9 cut(s)	67, 439, 881, 1195, 1323, 1381, 1606, 1702, 1969
Hpy188III	TCNNGA	9 cut(s)	528, 1313, 1496, 1547, 1625, 1664, 1794, 1801, 1918
Hpy8I	GTNNAC	9 cut(s)	67, 439, 881, 1195, 1323, 1381, 1606, 1702, 1969
Hpy99I	CGWCG	2 cut(s)	31, 46
HpyAV	CCTTC	6 cut(s)	299, 368, 1054, 1197, 1800, 1844
HpyCH4III	ACNGT	3 cut(s)	731, 1631, 1726
HpyCH4IV	ACGT	4 cut(s)	409, 673, 1317, 1602
HpyF10VI	GCNNNNNNNGC	8 cut(s)	227, 280, 384, 593, 1238, 1394, 1442, 1861
HpyF3I	CTNAG	8 cut(s)	240, 686, 973, 1248, 1368, 1425, 1548, 1736
HpySE526I	ACGT	4 cut(s)	409, 673, 1317, 1602
Hsp92I	GRCGYC	1 cut(s)	44
HspAI	GCGC	4 cut(s)	387, 1241, 1436, 1855
Kpn2I	TCCGGA	1 cut(s)	1793
KroI	GCCGGC	1 cut(s)	1834
KroNI	GCCGGC	1 cut(s)	1836
Ksp22I	TGATCA	1 cut(s)	676
KspAI	GTTAAC	1 cut(s)	1195
Kzo9I	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
LmnI	GCTCC	6 cut(s)	253, 559, 817, 1426, 1549, 1993
Lsp1109I	GCAGC	4 cut(s)	526, 619, 1018, 1225
LweI	GCATC	2 cut(s)	159, 1644
MabI	ACCWGGT	2 cut(s)	191, 1962
MaeII	ACGT	4 cut(s)	409, 673, 1317, 1602
MaeIII	GTNAC	9 cut(s)	187, 247, 349, 471, 1053, 1067, 1095, 1313, 1937
MalI	GATC	6 cut(s)	498, 678, 1355, 1404, 1500, 1907
MbiI	CCGCTC	1 cut(s)	1448
MboI	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
MboII	GAAGA	8 cut(s)	68, 93, 194, 199, 325, 623, 1688, 1922
MflI	RGATCY	3 cut(s)	496, 1402, 1498
MhlI	GDGCHC	3 cut(s)	69, 363, 1876
MluCI	AATT	3 cut(s)	1344, 1464, 1532
MlyI	GAGTC	3 cut(s)	525, 676, 1031
MmeI	TCCRAC	3 cut(s)	474, 1827, 1971
MroI	TCCGGA	1 cut(s)	1793
MroNI	GCCGGC	1 cut(s)	1834
MseI	TTAA	6 cut(s)	291, 312, 858, 1194, 1254, 1614
MslI	CAYNNNNRTG	1 cut(s)	1030
MspA1I	CMGCKG	1 cut(s)	503
MspCI	CTTAAG	1 cut(s)	311
MspI	CCGG	7 cut(s)	285, 354, 1100, 1743, 1794, 1835, 1932
MspR9I	CCNGG	7 cut(s)	193, 285, 342, 558, 966, 1744, 1964
Mva1269I	GAATGC	2 cut(s)	757, 1546
MvaI	CCWGG	5 cut(s)	193, 342, 558, 966, 1964
MvnI	CGCG	2 cut(s)	1438, 1857
MwoI	GCNNNNNNNGC	8 cut(s)	227, 280, 384, 593, 1238, 1394, 1442, 1861
NaeI	GCCGGC	1 cut(s)	1836
NciI	CCSGG	2 cut(s)	285, 1744
NcoI	CCATGG	1 cut(s)	762
NdeI	CATATG	1 cut(s)	637
NdeII	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
NgoMIV	GCCGGC	1 cut(s)	1834
NlaIV	GGNNCC	5 cut(s)	267, 498, 807, 1444, 1873
NmuCI	GTSAC	5 cut(s)	349, 471, 1067, 1095, 1313
NspI	RCATGY	3 cut(s)	472, 1013, 1753
PaeR7I	CTCGAG	1 cut(s)	362
PagI	TCATGA	1 cut(s)	1917
PaqCI	CACCTGC	1 cut(s)	1151
PceI	AGGCCT	1 cut(s)	448
PciI	ACATGT	2 cut(s)	468, 1749
PcsI	WCGNNNNNNNCGW	1 cut(s)	1671
PctI	GAATGC	2 cut(s)	757, 1546
PdiI	GCCGGC	1 cut(s)	1836
PfeI	GAWTC	7 cut(s)	77, 98, 155, 258, 969, 1782, 1797
PflFI	GACNNNGTC	1 cut(s)	1964
PflMI	CCANNNNNTGG	3 cut(s)	890, 1339, 1509
PinAI	ACCGGT	1 cut(s)	353
PkrI	GCNGC	8 cut(s)	48, 541, 634, 648, 1008, 1240, 1447, 1930
PleI	GAGTC	3 cut(s)	525, 676, 1031
PpsI	GAGTC	3 cut(s)	525, 676, 1031
Ppu21I	YACGTR	2 cut(s)	674, 1603
PpuMI	RGGWCCY	1 cut(s)	266
PscI	ACATGT	2 cut(s)	468, 1749
PshBI	ATTAAT	1 cut(s)	1254
Psp1406I	AACGTT	1 cut(s)	409
Psp5II	RGGWCCY	1 cut(s)	266
Psp6I	CCWGG	5 cut(s)	191, 340, 556, 964, 1962
PspEI	GGTNACC	1 cut(s)	1095
PspFI	CCCAGC	1 cut(s)	1349
PspGI	CCWGG	5 cut(s)	191, 340, 556, 964, 1962
PspN4I	GGNNCC	5 cut(s)	267, 498, 807, 1444, 1873
PspPI	GGNCC	4 cut(s)	266, 833, 881, 1966
PspPPI	RGGWCCY	1 cut(s)	266
PspXI	VCTCGAGB	1 cut(s)	362
PstNI	CAGNNNCTG	1 cut(s)	1238
PsuI	RGATCY	3 cut(s)	496, 1402, 1498
PsyI	GACNNNGTC	1 cut(s)	1964
PvuII	CAGCTG	1 cut(s)	503
RsaI	GTAC	5 cut(s)	626, 672, 1331, 1728, 1748
RsaNI	GTAC	5 cut(s)	625, 671, 1330, 1727, 1747
RseI	CAYNNNNRTG	1 cut(s)	1030
SaqAI	TTAA	6 cut(s)	291, 312, 858, 1194, 1254, 1614
SatI	GCNGC	8 cut(s)	47, 540, 633, 647, 1007, 1239, 1446, 1929
Sau3AI	GATC	6 cut(s)	496, 676, 1353, 1402, 1498, 1905
Sau96I	GGNCC	4 cut(s)	266, 833, 881, 1966
SchI	GAGTC	3 cut(s)	525, 676, 1031
ScrFI	CCNGG	7 cut(s)	193, 285, 342, 558, 966, 1744, 1964
SduI	GDGCHC	3 cut(s)	69, 363, 1876
SexAI	ACCWGGT	2 cut(s)	191, 1962
SfaNI	GCATC	2 cut(s)	159, 1644
SfcI	CTRYAG	1 cut(s)	1398
Sfr274I	CTCGAG	1 cut(s)	362
SgrAI	CRCCGGYG	1 cut(s)	353
SinI	GGWCC	3 cut(s)	266, 881, 1966
SlaI	CTCGAG	1 cut(s)	362
SmiMI	CAYNNNNRTG	1 cut(s)	1030
SmlI	CTYRAG	2 cut(s)	311, 362
SmoI	CTYRAG	2 cut(s)	311, 362
SnaBI	TACGTA	1 cut(s)	1603
Sse9I	AATT	3 cut(s)	1344, 1464, 1532
SseBI	AGGCCT	1 cut(s)	448
SspI	AATATT	1 cut(s)	1261
StuI	AGGCCT	1 cut(s)	448
StyD4I	CCNGG	7 cut(s)	191, 283, 340, 556, 964, 1742, 1962
StyI	CCWWGG	1 cut(s)	762
TaaI	ACNGT	3 cut(s)	731, 1631, 1726
TaiI	ACGT	4 cut(s)	412, 676, 1320, 1605
TaqI	TCGA	7 cut(s)	41, 125, 153, 363, 517, 1270, 1908
TasI	AATT	3 cut(s)	1344, 1464, 1532
TatI	WGTACW	1 cut(s)	624
TauI	GCSGC	4 cut(s)	49, 649, 1448, 1931
TfiI	GAWTC	7 cut(s)	77, 98, 155, 258, 969, 1782, 1797
Tru1I	TTAA	6 cut(s)	291, 312, 858, 1194, 1254, 1614
Tru9I	TTAA	6 cut(s)	291, 312, 858, 1194, 1254, 1614
TscAI	CASTG	2 cut(s)	582, 1390
TseFI	GTSAC	5 cut(s)	349, 471, 1067, 1095, 1313
TseI	GCWGC	4 cut(s)	539, 632, 1006, 1238
Tsp45I	GTSAC	5 cut(s)	349, 471, 1067, 1095, 1313
TspDTI	ATGAA	8 cut(s)	160, 325, 498, 624, 710, 806, 884, 1734
TspGWI	ACGGA	7 cut(s)	44, 144, 266, 1185, 1509, 1587, 1604
TspRI	CASTG	2 cut(s)	582, 1390
Tth111I	GACNNNGTC	1 cut(s)	1964
Van91I	CCANNNNNTGG	3 cut(s)	890, 1339, 1509
Vha464I	CTTAAG	1 cut(s)	311
VneI	GTGCAC	1 cut(s)	65
VpaK11BI	GGWCC	3 cut(s)	266, 881, 1966
VspI	ATTAAT	1 cut(s)	1254
XceI	RCATGY	3 cut(s)	472, 1013, 1753
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1118, 1970
XhoI	CTCGAG	1 cut(s)	362
XmiI	GTMKAC	3 cut(s)	438, 1380, 1605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.