Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0009041

Physical Location & Seq

Genomic Coordinates Reverse (-)

6769184 .. 6773675

Gene Structure 4492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1086400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGTCGTTTCTTAGACGGAGGAAGGGAAAAGCCGCTTCCGACTCGGAGCCGCCGTCTCCGCCGATTGGCGACGACAGCCAGACAGAAAAGGAACCCCAAACGCAGAAGGAGGAGCAGCAGCAAAAGCACACTCACAAGAAAAATGGCGGGGAAAAGCAGCAGAGGTGGTCGTGCGTCGACAGCTGCTGCTGGTTCATTGGGTTCATATGCTCGATCTGGTGGTTCCTGCTCTTCCTCTACAACGCAATGCCCGCCTCGTTTCCGCAGTACGTGACGGAGGCGATAACGGGGCCGATGACGGACCCGCCGGGGGTGAAATTGAGGAAGGAGGGGCTCACGGTGAAGCACCCGGTGGTGTTTGTGCCCGGGATTGTCACGGGCGGGCTCGAACTGTGGGAAGGGCATGGTTGTGCAGATGGGTTGTTCAGGAAGCGGCTGTGGGGCGGCACATTTGGTGAAGTGTATAAAAGACCGTTGTGCTGGGTTGAGCACATGTCTCTGGATAATGAGACTGGACTGGACCCTCCAGGTATACGGGTCAGGCCTGTTTCTGGCCTTGTGGCAGCTGATTACTTTGCACCAGGTTATTTCGTCTGGGCAGTTTTGATTGCAAATTTGGCTCGCATTGGATATGAAGAGAAAACAATGTATATGGCGTCATATGATTGGAGACTATCGTTTCAAAATACTGAGGTTAGGGACCAAACTTTAAGCAGGATAAAGAGTAACATAGAGCTTATGGTAGCCACAAATGGTGGTAACAAGGTGGTTGTTATTCCTCACTCAATGGGTGTTCTGTACTTTTTGCATTTCATGAAGTGGGTTGAGGCACCGGGACCAATGGGTGGTGGGGGTGGGTCAGATTGGTGTGCAAAGCATATTAAAGCTGTAATGAACATTGGTGGACCCTTTCTAGGGGTTCCAAAAGCCATTGCGGGAATTTTCTCAATGGAAGCTAGAGATATTGCAGTTGCCAGGGCTTTCGCACCAGGTGTTTTGGATAAGGATGTTTTTGGCCTCCAAACCTTACAACATATGATGCGAATGACCCGTACATGGGATGCAACCATGTCAATGATACCAAAAGGCGGGGACACTATTTGGGGTGGCCTTGATTGGTCACCTGAAGGATACTGCAATTGTAGTGCGAAGAAGGTGAAGAATAACGATACAATCAGTGCAGTTGAAAAGAGAGTAAACTATGGGAGGATTGTATCATTTGGGAAAGATGTAGCGGAGGCAGATTCCTCCAAGATTGAGATGATCGATTTCAGGGACGCTGTGAAGGGTAATTTCCTTGCAAATGCTACCCAGTGTGATGTATGGACGGAGTACCATGAAATGGGTGTCGGTGGTGTCAAGGCCGTTGCAGATTACAAGGTCTACACAGCTGGATCAATTTTGGATCTCTTTCACTTTGTTGCCCCCAAGCTGATGGCACGTGGGGATAATCATTTTTCTTATGGGATTGCTGACAATTTGGATGACCCAAAATATGAACACTACAAGTATTGGTCGAATCCCCTAGAAACAAAATTACCAAATGCTCCGGATATGGAGATCTATTCCATGTATGGAGTTGGAATCCCAACAGAGAGAGCATATGTATACAAGTTAACTCCTAGTGCTGAATGCTACATTCCCTTTCAGATAGATACCTCAGCAGAGGGTGGAAGTGAGGACCCTTGTTTAAAAGGTGGAATATATTCCACTGATGGCGATGAAACTGTTCCTGTTCTGAGTGCGGGTTTCATGTGCGCTAAAGGCTGGAGGGGTAAGACCCGATTCAATCCTGCAGGCATCCCTTCTTACATAAGGGAATATGATCATGCCCCTCCGGCTAATCTTCTTGAGGGACGAGGCACCCAAAGTGGTGCTCATGTTGACATAATGGGAAACTTTGCTTTGATCGAGGATGTTTTAAGAGTGGCAGCAGGTGCTACGGGAGAGGAATTGGGCGGAGACAAAGTGCACTCTGATATTTTCAAATGGTTATCCGGTGCTTCAAGATGCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008080 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046027 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 map00561

Pfam Domains

Protein Families

LCAT

Protein Analysis

673

Amino Acids

74.23

Weight (kDa)

6.1

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	142 - 632	8.1e-66	Lecithin:cholesterol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13640 AT5G13640 AT5G13640
fragaria_vesca	FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180
malus_domestica	MD02G1086400.v1.1 MD15G1213500.v1.1
prunus_persica	Prupe.7G203400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0094251
rosa_laevigata	RLG00000016471
rosa_multiflora	Rmu_co8505711.1_g000001 Rmu_sc0002193.1_g000017 Rmu_sc0006198.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147320
rosa_rugosa	Rorug02G0042500
rosa_samantha	Rh2AG090100 Rh2BG090100 Rh2CG092600 Rh2DG089000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1925
Acc36I	ACCTGC	1 cut(s)	1925
AccB1I	GGYRCC	2 cut(s)	829, 1862
AccB7I	CCANNNNNTGG	2 cut(s)	845, 1342
AccI	GTMKAC	4 cut(s)	177, 532, 1383, 1608
AccIII	TCCGGA	1 cut(s)	1549
AclWI	GGATC	2 cut(s)	1402, 1413
AcsI	RAATTY	2 cut(s)	613, 939
AcuI	CTGAAG	1 cut(s)	1146
AcvI	CACGTG	1 cut(s)	1442
AcyI	GRCGYC	1 cut(s)	656
AdeI	CACNNNGTG	2 cut(s)	352, 992
AfaI	GTAC	4 cut(s)	269, 800, 1054, 1334
AflIII	ACRYGT	1 cut(s)	492
AgsI	TTSAA	5 cut(s)	683, 1187, 1789, 1987, 2007
AjnI	CCWGG	4 cut(s)	526, 580, 974, 988
AluBI	AGCT	7 cut(s)	183, 566, 736, 887, 956, 1391, 1432
AluI	AGCT	7 cut(s)	183, 566, 736, 887, 956, 1391, 1432
Alw21I	GWGCWC	3 cut(s)	492, 1879, 1974
Alw26I	GTCTC	5 cut(s)	60, 501, 503, 664, 1956
Alw44I	GTGCAC	1 cut(s)	1970
AlwI	GGATC	2 cut(s)	1402, 1413
AlwNI	CAGNNNCTG	1 cut(s)	186
Ama87I	CYCGRG	1 cut(s)	365
Aor13HI	TCCGGA	1 cut(s)	1549
AoxI	GGCC	6 cut(s)	290, 542, 553, 1015, 1108, 1362
ApaLI	GTGCAC	1 cut(s)	1970
ApeKI	GCWGC	7 cut(s)	115, 118, 157, 183, 186, 563, 1931
ApoI	RAATTY	2 cut(s)	613, 939
Asp700I	GAANNNNTTC	2 cut(s)	1705, 1728
AspLEI	GCGC	1 cut(s)	1760
AspS9I	GGNCC	7 cut(s)	290, 301, 520, 700, 836, 905, 1681
AsuC2I	CCSGG	5 cut(s)	309, 350, 366, 367, 834
AsuHPI	GGTGA	5 cut(s)	325, 352, 467, 1113, 1168
AvaI	CYCGRG	1 cut(s)	365
AvaII	GGWCC	6 cut(s)	301, 520, 700, 836, 905, 1681
BaeGI	GKGCMC	2 cut(s)	366, 1974
BanI	GGYRCC	2 cut(s)	829, 1862
BanII	GRGCYC	2 cut(s)	336, 387
BbrPI	CACGTG	1 cut(s)	1442
Bbv12I	GWGCWC	3 cut(s)	492, 1879, 1974
BbvCI	CCTCAGC	1 cut(s)	1660
BbvI	GCAGC	7 cut(s)	127, 130, 169, 170, 173, 575, 1943
BccI	CCATC	3 cut(s)	410, 1429, 1709
BceAI	ACGGC	2 cut(s)	37, 1349
BciT130I	CCWGG	4 cut(s)	528, 582, 976, 990
BciVI	GTATCC	1 cut(s)	1124
BclI	TGATCA	1 cut(s)	1825
BcnI	CCSGG	5 cut(s)	309, 350, 366, 367, 834
BcoDI	GTCTC	5 cut(s)	60, 501, 503, 664, 1956
BfaI	CTAG	4 cut(s)	914, 957, 1526, 1623
BfmI	CTRYAG	1 cut(s)	1794
BfuAI	ACCTGC	1 cut(s)	1925
BfuI	GTATCC	1 cut(s)	1124
BglI	GCCNNNNNGGC	1 cut(s)	1838
BglII	AGATCT	1 cut(s)	1560
Bme1390I	CCNGG	9 cut(s)	309, 350, 366, 367, 528, 582, 834, 976, 990
Bme18I	GGWCC	6 cut(s)	301, 520, 700, 836, 905, 1681
BmeT110I	CYCGRG	1 cut(s)	365
BmgT120I	GGNCC	7 cut(s)	290, 301, 520, 700, 836, 905, 1681
BmrFI	CCNGG	9 cut(s)	309, 350, 366, 367, 528, 582, 834, 976, 990
BmrI	ACTGGG	1 cut(s)	1306
BmsI	GCATC	4 cut(s)	1029, 1051, 1809, 2000
BmuI	ACTGGG	1 cut(s)	1306
BpmI	CTGGAG	2 cut(s)	510, 1789
Bpu10I	CCTNAGC	1 cut(s)	1660
BpuEI	CTTGAG	1 cut(s)	1871
BpuMI	CCSGG	5 cut(s)	309, 350, 366, 367, 834
Bsa29I	ATCGAT	1 cut(s)	1266
BsaAI	YACGTR	2 cut(s)	271, 1442
BsaHI	GRCGYC	1 cut(s)	656
BsaJI	CCNNGG	3 cut(s)	308, 365, 975
BsaWI	WCCGGW	2 cut(s)	1549, 1997
BsaXI	ACNNNNNCTCC	4 cut(s)	38, 68, 1953, 1983
Bse1I	ACTGG	3 cut(s)	517, 522, 1312
Bse3DI	GCAATG	2 cut(s)	252, 930
BseAI	TCCGGA	1 cut(s)	1549
BseBI	CCWGG	4 cut(s)	528, 582, 976, 990
BseCI	ATCGAT	1 cut(s)	1266
BseDI	CCNNGG	3 cut(s)	308, 365, 975
BseGI	GGATG	5 cut(s)	1012, 1066, 1489, 1800, 1921
BseMI	GCAATG	2 cut(s)	252, 930
BseMII	CTCAG	3 cut(s)	681, 1674, 1730
BseNI	ACTGG	3 cut(s)	517, 522, 1312
BseRI	GAGGAG	1 cut(s)	125
BseSI	GKGCMC	2 cut(s)	366, 1974
BseXI	GCAGC	7 cut(s)	127, 130, 169, 170, 173, 575, 1943
BseYI	CCCAGC	1 cut(s)	480
BsgI	GTGCAG	2 cut(s)	432, 1200
BshFI	GGCC	6 cut(s)	292, 544, 555, 1017, 1110, 1364
BshNI	GGYRCC	2 cut(s)	829, 1862
BshVI	ATCGAT	1 cut(s)	1266
BsiHKAI	GWGCWC	3 cut(s)	492, 1879, 1974
BsiHKCI	CYCGRG	1 cut(s)	365
BsiSI	CCGG	7 cut(s)	308, 350, 366, 833, 1550, 1838, 1998
BslFI	GGGAC	5 cut(s)	713, 849, 1106, 1289, 1869
BsmAI	GTCTC	5 cut(s)	60, 501, 503, 664, 1956
BsmBI	CGTCTC	1 cut(s)	60
BsmFI	GGGAC	5 cut(s)	713, 849, 1106, 1289, 1869
BsmI	GAATGC	1 cut(s)	1637
BsnI	GGCC	6 cut(s)	292, 544, 555, 1017, 1110, 1364
BsoBI	CYCGRG	1 cut(s)	365
Bsp1286I	GDGCHC	6 cut(s)	336, 366, 387, 492, 1879, 1974
Bsp13I	TCCGGA	1 cut(s)	1549
Bsp143I	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
BspANI	GGCC	6 cut(s)	292, 544, 555, 1017, 1110, 1364
BspCNI	CTCAG	3 cut(s)	682, 1673, 1731
BspDI	ATCGAT	1 cut(s)	1266
BspEI	TCCGGA	1 cut(s)	1549
BspHI	TCATGA	1 cut(s)	813
BspMAI	CTGCAG	1 cut(s)	1798
BspMI	ACCTGC	1 cut(s)	1925
BspPI	GGATC	2 cut(s)	1402, 1413
BspQI	GCTCTTC	1 cut(s)	236
BspT107I	GGYRCC	2 cut(s)	829, 1862
BsrDI	GCAATG	2 cut(s)	252, 930
BsrI	ACTGG	3 cut(s)	517, 522, 1312
BssECI	CCNNGG	3 cut(s)	308, 365, 975
BssMI	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
BssNAI	GTATAC	2 cut(s)	533, 1609
BssNI	GRCGYC	1 cut(s)	656
Bst1107I	GTATAC	2 cut(s)	533, 1609
Bst2UI	CCWGG	4 cut(s)	528, 582, 976, 990
Bst4CI	ACNGT	4 cut(s)	340, 393, 474, 1729
Bst6I	CTCTTC	2 cut(s)	236, 630
BstACI	GRCGYC	1 cut(s)	656
BstAPI	GCANNNNNTGC	1 cut(s)	1937
BstBAI	YACGTR	2 cut(s)	271, 1442
BstC8I	GCNNGC	4 cut(s)	252, 383, 622, 1798
BstDEI	CTNAG	4 cut(s)	11, 690, 1660, 1739
BstEII	GGTNACC	1 cut(s)	1119
BstF5I	GGATG	5 cut(s)	1012, 1066, 1489, 1800, 1921
BstHHI	GCGC	1 cut(s)	1760
BstKTI	GATC	7 cut(s)	216, 1266, 1397, 1408, 1563, 1828, 1911
BstMAI	GTCTC	5 cut(s)	60, 501, 503, 664, 1956
BstMBI	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
BstMWI	GCNNNNNNNGC	9 cut(s)	58, 75, 124, 180, 251, 617, 1764, 1838, 1937
BstNI	CCWGG	4 cut(s)	528, 582, 976, 990
BstNSI	RCATGY	1 cut(s)	496
BstPI	GGTNACC	1 cut(s)	1119
BstSCI	CCNGG	9 cut(s)	307, 348, 364, 365, 526, 580, 832, 974, 988
BstSFI	CTRYAG	1 cut(s)	1794
BstSLI	GKGCMC	2 cut(s)	366, 1974
BstV1I	GCAGC	7 cut(s)	127, 130, 169, 170, 173, 575, 1943
BstX2I	RGATCY	2 cut(s)	1405, 1560
BstXI	CCANNNNNNTGG	1 cut(s)	1435
BstYI	RGATCY	2 cut(s)	1405, 1560
BstZ17I	GTATAC	2 cut(s)	533, 1609
Bsu15I	ATCGAT	1 cut(s)	1266
BsuI	GTATCC	1 cut(s)	1124
BsuRI	GGCC	6 cut(s)	292, 544, 555, 1017, 1110, 1364
BsuTUI	ATCGAT	1 cut(s)	1266
BtgZI	GCGATG	1 cut(s)	1734
BtsCI	GGATG	5 cut(s)	1012, 1066, 1489, 1800, 1921
BtsIMutI	CAGTG	3 cut(s)	1183, 1319, 1710
BveI	ACCTGC	1 cut(s)	1925
Cac8I	GCNNGC	4 cut(s)	252, 383, 622, 1798
CaiI	CAGNNNCTG	1 cut(s)	186
CciI	TCATGA	1 cut(s)	813
CfoI	GCGC	1 cut(s)	1760
Cfr13I	GGNCC	7 cut(s)	290, 301, 520, 700, 836, 905, 1681
Cfr9I	CCCGGG	1 cut(s)	365
ClaI	ATCGAT	1 cut(s)	1266
CseI	GACGC	3 cut(s)	163, 645, 1286
CsiI	ACCWGGT	2 cut(s)	580, 988
Csp6I	GTAC	4 cut(s)	268, 799, 1053, 1333
CviQI	GTAC	4 cut(s)	268, 799, 1053, 1333
DdeI	CTNAG	4 cut(s)	11, 690, 1660, 1739
DpnI	GATC	7 cut(s)	215, 1265, 1396, 1407, 1562, 1827, 1910
DpnII	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
DraI	TTTAAA	1 cut(s)	1692
DraIII	CACNNNGTG	2 cut(s)	352, 992
Eam1104I	CTCTTC	2 cut(s)	236, 630
EarI	CTCTTC	2 cut(s)	236, 630
EciI	GGCGGA	2 cut(s)	48, 1974
Eco147I	AGGCCT	1 cut(s)	544
Eco24I	GRGCYC	2 cut(s)	336, 387
Eco47I	GGWCC	6 cut(s)	301, 520, 700, 836, 905, 1681
Eco57I	CTGAAG	1 cut(s)	1146
Eco72I	CACGTG	1 cut(s)	1442
Eco88I	CYCGRG	1 cut(s)	365
Eco91I	GGTNACC	1 cut(s)	1119
EcoO109I	RGGNCCY	1 cut(s)	1681
EcoO65I	GGTNACC	1 cut(s)	1119
EcoRII	CCWGG	4 cut(s)	526, 580, 974, 988
EcoT38I	GRGCYC	2 cut(s)	336, 387
Esp3I	CGTCTC	1 cut(s)	60
FaqI	GGGAC	5 cut(s)	713, 849, 1106, 1289, 1869
FauI	CCCGC	7 cut(s)	140, 259, 312, 374, 928, 1082, 1738
FauNDI	CATATG	4 cut(s)	206, 661, 1035, 1603
FbaI	TGATCA	1 cut(s)	1825
FblI	GTMKAC	4 cut(s)	177, 532, 1383, 1608
FokI	GGATG	5 cut(s)	1019, 1073, 1496, 1787, 1928
FriOI	GRGCYC	2 cut(s)	336, 387
FspBI	CTAG	4 cut(s)	914, 957, 1526, 1623
GlaI	GCGC	1 cut(s)	1759
GsaI	CCCAGC	1 cut(s)	484
GsuI	CTGGAG	2 cut(s)	510, 1789
HaeIII	GGCC	6 cut(s)	292, 544, 555, 1017, 1110, 1364
HapII	CCGG	7 cut(s)	308, 350, 366, 833, 1550, 1838, 1998
HgaI	GACGC	3 cut(s)	163, 645, 1286
HhaI	GCGC	1 cut(s)	1760
Hin1I	GRCGYC	1 cut(s)	656
Hin6I	GCGC	1 cut(s)	1758
HinP1I	GCGC	1 cut(s)	1758
HincII	GTYRAC	3 cut(s)	178, 1617, 1885
HindII	GTYRAC	3 cut(s)	178, 1617, 1885
HinfI	GANTC	5 cut(s)	41, 1244, 1519, 1584, 1785
HpaI	GTTAAC	1 cut(s)	1617
HpaII	CCGG	7 cut(s)	308, 350, 366, 833, 1550, 1838, 1998
HphI	GGTGA	5 cut(s)	325, 352, 467, 1113, 1168
Hpy166II	GTNNAC	9 cut(s)	178, 533, 905, 1198, 1384, 1609, 1617, 1885, 1972
Hpy188I	TCNGA	6 cut(s)	40, 46, 862, 1650, 1740, 1978
Hpy188III	TCNNGA	6 cut(s)	427, 500, 814, 1550, 1850, 2007
Hpy8I	GTNNAC	9 cut(s)	178, 533, 905, 1198, 1384, 1609, 1617, 1885, 1972
Hpy99I	CGWCG	2 cut(s)	74, 179
HpyAV	CCTTC	8 cut(s)	16, 100, 319, 392, 1121, 1147, 1279, 1815
HpyCH4III	ACNGT	4 cut(s)	340, 393, 474, 1729
HpyCH4IV	ACGT	2 cut(s)	270, 1441
HpyF10VI	GCNNNNNNNGC	9 cut(s)	58, 75, 124, 180, 251, 617, 1764, 1838, 1937
HpyF3I	CTNAG	4 cut(s)	11, 690, 1660, 1739
HpySE526I	ACGT	2 cut(s)	270, 1441
Hsp92I	GRCGYC	1 cut(s)	656
HspAI	GCGC	1 cut(s)	1758
Kpn2I	TCCGGA	1 cut(s)	1549
Ksp22I	TGATCA	1 cut(s)	1825
KspAI	GTTAAC	1 cut(s)	1617
Kzo9I	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
LguI	GCTCTTC	1 cut(s)	236
LmnI	GCTCC	3 cut(s)	46, 112, 1552
Lsp1109I	GCAGC	7 cut(s)	127, 130, 169, 170, 173, 575, 1943
LweI	GCATC	4 cut(s)	1029, 1051, 1809, 2000
MabI	ACCWGGT	2 cut(s)	580, 988
MaeI	CTAG	4 cut(s)	914, 957, 1526, 1623
MaeII	ACGT	2 cut(s)	270, 1441
MaeIII	GTNAC	5 cut(s)	271, 373, 725, 758, 1119
MalI	GATC	7 cut(s)	215, 1265, 1396, 1407, 1562, 1827, 1910
MboI	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
MboII	GAAGA	5 cut(s)	223, 647, 1162, 1171, 1838
MfeI	CAATTG	1 cut(s)	1138
MflI	RGATCY	2 cut(s)	1405, 1560
MhlI	GDGCHC	6 cut(s)	336, 366, 387, 492, 1879, 1974
MluCI	AATT	9 cut(s)	317, 613, 939, 1138, 1291, 1398, 1477, 1535, 1952
MlyI	GAGTC	1 cut(s)	35
MmeI	TCCRAC	2 cut(s)	63, 1561
MroI	TCCGGA	1 cut(s)	1549
MroXI	GAANNNNTTC	2 cut(s)	1705, 1728
MseI	TTAA	5 cut(s)	710, 882, 1616, 1691, 1922
MslI	CAYNNNNRTG	2 cut(s)	408, 1073
MspA1I	CMGCKG	3 cut(s)	183, 566, 1391
MspI	CCGG	7 cut(s)	308, 350, 366, 833, 1550, 1838, 1998
MspR9I	CCNGG	9 cut(s)	309, 350, 366, 367, 528, 582, 834, 976, 990
MunI	CAATTG	1 cut(s)	1138
Mva1269I	GAATGC	1 cut(s)	1637
MvaI	CCWGG	4 cut(s)	528, 582, 976, 990
MwoI	GCNNNNNNNGC	9 cut(s)	58, 75, 124, 180, 251, 617, 1764, 1838, 1937
NciI	CCSGG	5 cut(s)	309, 350, 366, 367, 834
NdeI	CATATG	4 cut(s)	206, 661, 1035, 1603
NdeII	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
NmuCI	GTSAC	3 cut(s)	271, 373, 1119
NspI	RCATGY	1 cut(s)	496
PagI	TCATGA	1 cut(s)	813
PaqCI	CACCTGC	1 cut(s)	1925
PceI	AGGCCT	1 cut(s)	544
PciI	ACATGT	1 cut(s)	492
PciSI	GCTCTTC	1 cut(s)	236
PcsI	WCGNNNNNNNCGW	1 cut(s)	50
PctI	GAATGC	1 cut(s)	1637
PdmI	GAANNNNTTC	2 cut(s)	1705, 1728
PfeI	GAWTC	4 cut(s)	1244, 1519, 1584, 1785
PflMI	CCANNNNNTGG	2 cut(s)	845, 1342
PleI	GAGTC	1 cut(s)	35
PmaCI	CACGTG	1 cut(s)	1442
PmlI	CACGTG	1 cut(s)	1442
PpsI	GAGTC	1 cut(s)	35
Ppu21I	YACGTR	2 cut(s)	271, 1442
PpuMI	RGGWCCY	1 cut(s)	1681
PscI	ACATGT	1 cut(s)	492
Psp5II	RGGWCCY	1 cut(s)	1681
Psp6I	CCWGG	4 cut(s)	526, 580, 974, 988
PspCI	CACGTG	1 cut(s)	1442
PspEI	GGTNACC	1 cut(s)	1119
PspFI	CCCAGC	1 cut(s)	480
PspGI	CCWGG	4 cut(s)	526, 580, 974, 988
PspPI	GGNCC	7 cut(s)	290, 301, 520, 700, 836, 905, 1681
PspPPI	RGGWCCY	1 cut(s)	1681
PstI	CTGCAG	1 cut(s)	1798
PstNI	CAGNNNCTG	1 cut(s)	186
PsuI	RGATCY	2 cut(s)	1405, 1560
PvuII	CAGCTG	3 cut(s)	183, 566, 1391
RsaI	GTAC	4 cut(s)	269, 800, 1054, 1334
RsaNI	GTAC	4 cut(s)	268, 799, 1053, 1333
RseI	CAYNNNNRTG	2 cut(s)	408, 1073
SalI	GTCGAC	1 cut(s)	176
SapI	GCTCTTC	1 cut(s)	236
SaqAI	TTAA	5 cut(s)	710, 882, 1616, 1691, 1922
Sau3AI	GATC	7 cut(s)	213, 1263, 1394, 1405, 1560, 1825, 1908
Sau96I	GGNCC	7 cut(s)	290, 301, 520, 700, 836, 905, 1681
SbfI	CCTGCAGG	1 cut(s)	1798
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	9 cut(s)	309, 350, 366, 367, 528, 582, 834, 976, 990
SdaI	CCTGCAGG	1 cut(s)	1798
SduI	GDGCHC	6 cut(s)	336, 366, 387, 492, 1879, 1974
SexAI	ACCWGGT	2 cut(s)	580, 988
SfaNI	GCATC	4 cut(s)	1029, 1051, 1809, 2000
SfcI	CTRYAG	1 cut(s)	1794
SinI	GGWCC	6 cut(s)	301, 520, 700, 836, 905, 1681
SmaI	CCCGGG	1 cut(s)	367
SmiMI	CAYNNNNRTG	2 cut(s)	408, 1073
SmlI	CTYRAG	1 cut(s)	1850
SmoI	CTYRAG	1 cut(s)	1850
Sse8387I	CCTGCAGG	1 cut(s)	1798
Sse9I	AATT	9 cut(s)	317, 613, 939, 1138, 1291, 1398, 1477, 1535, 1952
SseBI	AGGCCT	1 cut(s)	544
SspMI	CTAG	4 cut(s)	914, 957, 1526, 1623
StuI	AGGCCT	1 cut(s)	544
StyD4I	CCNGG	9 cut(s)	307, 348, 364, 365, 526, 580, 832, 974, 988
TaaI	ACNGT	4 cut(s)	340, 393, 474, 1729
TaiI	ACGT	2 cut(s)	273, 1444
TaqI	TCGA	6 cut(s)	177, 212, 387, 1266, 1517, 1911
TasI	AATT	9 cut(s)	317, 613, 939, 1138, 1291, 1398, 1477, 1535, 1952
TatI	WGTACW	1 cut(s)	798
TauI	GCSGC	4 cut(s)	35, 52, 436, 447
TfiI	GAWTC	4 cut(s)	1244, 1519, 1584, 1785
Tru1I	TTAA	5 cut(s)	710, 882, 1616, 1691, 1922
Tru9I	TTAA	5 cut(s)	710, 882, 1616, 1691, 1922
TscAI	CASTG	3 cut(s)	1183, 1319, 1717
TseFI	GTSAC	3 cut(s)	271, 373, 1119
TseI	GCWGC	7 cut(s)	115, 118, 157, 183, 186, 563, 1931
Tsp45I	GTSAC	3 cut(s)	271, 373, 1119
TspGWI	ACGGA	4 cut(s)	31, 290, 314, 1343
TspMI	CCCGGG	1 cut(s)	365
TspRI	CASTG	3 cut(s)	1183, 1319, 1717
Van91I	CCANNNNNTGG	2 cut(s)	845, 1342
VneI	GTGCAC	1 cut(s)	1970
VpaK11BI	GGWCC	6 cut(s)	301, 520, 700, 836, 905, 1681
XapI	RAATTY	2 cut(s)	613, 939
XceI	RCATGY	1 cut(s)	496
XmaI	CCCGGG	1 cut(s)	365
XmiI	GTMKAC	4 cut(s)	177, 532, 1383, 1608
XmnI	GAANNNNTTC	2 cut(s)	1705, 1728
XspI	CTAG	4 cut(s)	914, 957, 1526, 1623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.