Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0009041

Physical Location & Seq

Genomic Coordinates Reverse (-)

7536674 .. 7541868

Gene Structure 5195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG090100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGTCGTTTCTGAGACGGAGAAAGGGGAAGGCGGAGAATTTGGAGCCGGACGAGAGTGAGACGGAGAAGGAACCCGAACCCGGTGAGGAGAAGAAAACGACAACGACGACGACGCGTCGTCGGAGAAGGAACCCGAACCGGTGGTCGTGCGTGGCCAACTGCTGCTGGCTCATCGGAGTCATATGCTCGATCTGGTGGTTCCTGCTGTTCTTGCTCAACGCAATGCCGGCGTCGTTTCCTCAGTACGTGACGGAGGCGATAACGGGTCCGGTTTCCGACCCGCCCGGAGTGAAATTGAGGAAGGAGGGCTTGACGGCGAAGCACCCGGTGGTGTTTGTGCCCGGAATTGTCACCGGCGGGCTCGAATTGTGGGAAGGTCATAGCTGCGCCGATGGGTTGTTTAGGAAGAGATTGTGGGGCGGCACATTTGGGGAATTGTATAAAAGACCATTATGCTGGGTTGAACATATGTCTCTGGACAATGAAACTGGACTGGACCCTGCAGGTATAAGGGTTAGGCCTGTATCTGGTCTTGTGGCGGCTGATTACTTTGCCCCTGGTTACTTTGTGTGGGCAGTTTTAATTGCTAATTTGGCTCGCATTGGATATGAGGAGAAAACCATGTATATGGCTTCATATGATTGGAGATTATCGTTTCAGAATACAGAGGTTAGGGACCAAACTTTGAGCAGAATAAAAAGTAATATAGAACTTATGGTAGCTACAAATGGTGGCAACAAGGTGGTTGTTCTCCCACATTCAATGGGTGTTCTGTACTTTCTGCATTTTATGAAATGGGTTGAGGCACCAGCACCAATGGGAGGTGGGGGTGGATCAGATTGGTGTGCTAAGCATATTAAAGCTGTAATGAACATCGGTGGCCCCTTTTTAGGGGTTCCAAAAGCTGTTGCTGGACTTTTCTCTATTGAGGCCAAAGACATTGCTGTTGCCAGGGCTTTTGCACCAGGTGTTTTGGATAAGGATGTTTTTGGTCTCCAAACCTTACAACATATGATGCGGATGACCCGGACATGGGATTCAACTATGTCTATGATACCAAAAGGCGGGGACACAATATGGGGTGGTCTTGACCGGTCACCTGAAGAATACTGCCATTGTGATGCAAAGAAGTTGAAGAATAATGATACCAAAGATGCAGAGCCATATGGAGTGAATTATGGGAGGATTATATCATTTGGGAAAGACGTAGCGGAGACGCATTCCTCCAAGATTGAGAGGATCGATTTTAGGGATGCTGTTAAGGGTAATTTACTTGCGAATGCTACCCATTGTGATGTATGGACAGAGTACCATGACATGGGTGTTGGGGGTGTCAAAGCTGTTTCAGATTACAAAATCTACACAGCTGGATCAATTTTGGATCTGCTTCATTTTGTTGCGCCCAAATTGATGGCACGTGGGGATGCTCATTTTTCGTATGGAATTGCGGACAATTTGGATGACCCCAAGTATGAACACTACAAATATTGGTCAAATCCCCTAGAAACAAGATTACCAAATGCTCCTGATATGGAGATCTATTCTATGTATGGAGTTGGCATCCCTACCGAAAGAGCATATGTGTATAAGTTAACTCCTACTGCTGAATGCTACATTCCCTTTCAAATAGATACCTCAGCAGAGGGTGGAAGCGACAACCCGTGTTTAAAAGGTGGAGTGTACTCCGCTGATGGGGATGAAACTGTGCCGGTGTTGAGTGCAGGTTTCATGTGTGCTAAAGCCTGGAGAGGAAAGACCCGTTTCAACCCTTCTGGCATTCGTACTTACTTAAGGGAGTACGACCATGCCCCTCCAGCTAATCTTCTAGAGGGCCGGGGTACCCAAAGTGGTGCTCATGTTGATATAATGGGAAACTTTGCTTTAATTGAGGATGTTTTAAGAGTAGCAGCAGGCGCTACGGGAGATGAATTGGGTGGAGATAAAGTGCACTCTGATATTTTCAAGTGGTCTGAAAGGATCAATATAGATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008080 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046027 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 map00561

Pfam Domains

Protein Families

LCAT

Protein Analysis

664

Amino Acids

73.67

Weight (kDa)

6.22

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	134 - 624	7.9e-62	Lecithin:cholesterol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13640 AT5G13640 AT5G13640
fragaria_vesca	FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180
malus_domestica	MD02G1086400.v1.1 MD15G1213500.v1.1
prunus_persica	Prupe.7G203400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0094251
rosa_laevigata	RLG00000016471
rosa_multiflora	Rmu_co8505711.1_g000001 Rmu_sc0002193.1_g000017 Rmu_sc0006198.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147320
rosa_rugosa	Rorug02G0042500
rosa_samantha	Rh2AG090100 Rh2BG090100 Rh2CG092600 Rh2DG089000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	494, 1712
Acc65I	GGTACC	1 cut(s)	1838
AccB1I	GGYRCC	2 cut(s)	805, 1838
AccB7I	CCANNNNNTGG	1 cut(s)	1318
AccII	CGCG	1 cut(s)	115
AclWI	GGATC	5 cut(s)	841, 1247, 1378, 1389, 1985
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	1 cut(s)	37
AcuI	CTGAAG	1 cut(s)	1122
AcvI	CACGTG	1 cut(s)	1418
AcyI	GRCGYC	1 cut(s)	230
AdeI	CACNNNGTG	2 cut(s)	328, 968
AfaI	GTAC	7 cut(s)	245, 776, 1310, 1682, 1783, 1799, 1840
AflII	CTTAAG	1 cut(s)	1789
AflIII	ACRYGT	1 cut(s)	113
AgeI	ACCGGT	2 cut(s)	138, 1092
AgsI	TTSAA	7 cut(s)	464, 762, 1041, 1135, 1625, 1765, 1963
AhdI	GACNNNNNGTC	2 cut(s)	114, 117
AjnI	CCWGG	4 cut(s)	556, 950, 964, 1742
AluBI	AGCT	7 cut(s)	384, 722, 863, 905, 1340, 1367, 1817
AluI	AGCT	7 cut(s)	384, 722, 863, 905, 1340, 1367, 1817
Alw21I	GWGCWC	2 cut(s)	1855, 1950
Alw26I	GTCTC	5 cut(s)	7, 53, 477, 998, 1208
Alw44I	GTGCAC	1 cut(s)	1946
AlwI	GGATC	5 cut(s)	841, 1247, 1378, 1389, 1985
AoxI	GGCC	5 cut(s)	153, 518, 880, 930, 1831
ApaLI	GTGCAC	1 cut(s)	1946
ApeKI	GCWGC	3 cut(s)	162, 384, 1907
ApoI	RAATTY	1 cut(s)	37
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AsiGI	ACCGGT	2 cut(s)	138, 1092
Asp718I	GGTACC	1 cut(s)	1838
AspLEI	GCGC	3 cut(s)	389, 1402, 1916
AspS9I	GGNCC	5 cut(s)	266, 496, 676, 881, 1831
AsuC2I	CCSGG	6 cut(s)	81, 285, 326, 342, 1027, 1835
AsuHPI	GGTGA	3 cut(s)	95, 343, 1089
AvaII	GGWCC	3 cut(s)	266, 496, 676
BaeGI	GKGCMC	2 cut(s)	342, 1950
BalI	TGGCCA	1 cut(s)	155
BanI	GGYRCC	2 cut(s)	805, 1838
BanII	GRGCYC	1 cut(s)	363
BbrPI	CACGTG	1 cut(s)	1418
Bbv12I	GWGCWC	2 cut(s)	1855, 1950
BbvCI	CCTCAGC	1 cut(s)	1636
BbvI	GCAGC	3 cut(s)	149, 371, 1919
BccI	CCATC	3 cut(s)	386, 1405, 1685
BceAI	ACGGC	1 cut(s)	330
BciT130I	CCWGG	4 cut(s)	558, 952, 966, 1744
BcnI	CCSGG	6 cut(s)	81, 285, 326, 342, 1027, 1835
BcoDI	GTCTC	5 cut(s)	7, 53, 477, 998, 1208
BfaI	CTAG	2 cut(s)	1502, 1826
BfmI	CTRYAG	1 cut(s)	501
BfoI	RGCGCY	1 cut(s)	1917
BfrI	CTTAAG	1 cut(s)	1789
BfuAI	ACCTGC	2 cut(s)	494, 1712
BglII	AGATCT	2 cut(s)	1536, 1987
BisI	GCNGC	5 cut(s)	163, 385, 421, 540, 1908
BlpI	GCTNAGC	1 cut(s)	849
BlsI	GCNGC	5 cut(s)	164, 386, 422, 541, 1909
Bme18I	GGWCC	3 cut(s)	266, 496, 676
BmeRI	GACNNNNNGTC	2 cut(s)	114, 117
BmgT120I	GGNCC	5 cut(s)	266, 496, 676, 881, 1831
BmsI	GCATC	6 cut(s)	1005, 1111, 1144, 1243, 1414, 1569
BpmI	CTGGAG	2 cut(s)	1765, 1797
Bpu10I	CCTNAGC	1 cut(s)	1636
Bpu1102I	GCTNAGC	1 cut(s)	849
BpuMI	CCSGG	6 cut(s)	81, 285, 326, 342, 1027, 1835
Bsa29I	ATCGAT	1 cut(s)	1242
BsaAI	YACGTR	2 cut(s)	247, 1418
BsaHI	GRCGYC	1 cut(s)	230
BsaI	GGTCTC	1 cut(s)	998
BsaJI	CCNNGG	3 cut(s)	556, 951, 1834
BsaWI	WCCGGW	3 cut(s)	138, 268, 1092
BsaXI	ACNNNNNCTCC	2 cut(s)	1929, 1959
Bse118I	RCCGGY	5 cut(s)	138, 226, 353, 1092, 1708
Bse1I	ACTGG	2 cut(s)	493, 498
Bse3DI	GCAATG	2 cut(s)	228, 939
BseBI	CCWGG	4 cut(s)	558, 952, 966, 1744
BseCI	ATCGAT	1 cut(s)	1242
BseDI	CCNNGG	3 cut(s)	556, 951, 1834
BseGI	GGATG	8 cut(s)	988, 1026, 1258, 1429, 1465, 1560, 1702, 1897
BseMI	GCAATG	2 cut(s)	228, 939
BseMII	CTCAG	2 cut(s)	254, 1650
BseNI	ACTGG	2 cut(s)	493, 498
BseRI	GAGGAG	2 cut(s)	101, 626
BseSI	GKGCMC	2 cut(s)	342, 1950
BseXI	GCAGC	3 cut(s)	149, 371, 1919
BseYI	CCCAGC	1 cut(s)	456
BsgI	GTGCAG	1 cut(s)	1740
Bsh1236I	CGCG	1 cut(s)	115
BshFI	GGCC	5 cut(s)	155, 520, 882, 932, 1833
BshNI	GGYRCC	2 cut(s)	805, 1838
BshTI	ACCGGT	2 cut(s)	138, 1092
BshVI	ATCGAT	1 cut(s)	1242
BsiHKAI	GWGCWC	2 cut(s)	1855, 1950
BslFI	GGGAC	2 cut(s)	689, 1082
BsmAI	GTCTC	5 cut(s)	7, 53, 477, 998, 1208
BsmBI	CGTCTC	3 cut(s)	7, 53, 1208
BsmFI	GGGAC	2 cut(s)	689, 1082
BsmI	GAATGC	4 cut(s)	1219, 1285, 1613, 1776
BsnI	GGCC	5 cut(s)	155, 520, 882, 932, 1833
Bso31I	GGTCTC	1 cut(s)	998
Bsp1286I	GDGCHC	4 cut(s)	342, 363, 1855, 1950
Bsp143I	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
Bsp1720I	GCTNAGC	1 cut(s)	849
BspANI	GGCC	5 cut(s)	155, 520, 882, 932, 1833
BspCNI	CTCAG	2 cut(s)	253, 1649
BspDI	ATCGAT	1 cut(s)	1242
BspFNI	CGCG	1 cut(s)	115
BspMAI	CTGCAG	1 cut(s)	505
BspMI	ACCTGC	2 cut(s)	494, 1712
BspPI	GGATC	5 cut(s)	841, 1247, 1378, 1389, 1985
BspT107I	GGYRCC	2 cut(s)	805, 1838
BspTI	CTTAAG	1 cut(s)	1789
BspTNI	GGTCTC	1 cut(s)	998
BsrDI	GCAATG	2 cut(s)	228, 939
BsrFI	RCCGGY	5 cut(s)	138, 226, 353, 1092, 1708
BsrI	ACTGG	2 cut(s)	493, 498
BssAI	RCCGGY	5 cut(s)	138, 226, 353, 1092, 1708
BssECI	CCNNGG	3 cut(s)	556, 951, 1834
BssMI	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
BssNI	GRCGYC	1 cut(s)	230
Bst2UI	CCWGG	4 cut(s)	558, 952, 966, 1744
Bst4CI	ACNGT	1 cut(s)	1705
Bst6I	CTCTTC	1 cut(s)	401
BstACI	GRCGYC	1 cut(s)	230
BstAFI	CTTAAG	1 cut(s)	1789
BstBAI	YACGTR	2 cut(s)	247, 1418
BstC8I	GCNNGC	5 cut(s)	167, 228, 359, 598, 1912
BstDEI	CTNAG	4 cut(s)	11, 240, 849, 1636
BstEII	GGTNACC	1 cut(s)	1095
BstF5I	GGATG	8 cut(s)	988, 1026, 1258, 1429, 1465, 1560, 1702, 1897
BstFNI	CGCG	1 cut(s)	115
BstH2I	RGCGCY	1 cut(s)	1917
BstHHI	GCGC	3 cut(s)	389, 1402, 1916
BstKTI	GATC	8 cut(s)	192, 836, 1242, 1373, 1384, 1539, 1980, 1990
BstMAI	GTCTC	5 cut(s)	7, 53, 477, 998, 1208
BstMBI	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
BstMWI	GCNNNNNNNGC	5 cut(s)	211, 227, 593, 1814, 1913
BstNI	CCWGG	4 cut(s)	558, 952, 966, 1744
BstPI	GGTNACC	1 cut(s)	1095
BstSFI	CTRYAG	1 cut(s)	501
BstSLI	GKGCMC	2 cut(s)	342, 1950
BstUI	CGCG	1 cut(s)	115
BstV1I	GCAGC	3 cut(s)	149, 371, 1919
BstX2I	RGATCY	3 cut(s)	1381, 1536, 1987
BstXI	CCANNNNNNTGG	3 cut(s)	456, 628, 1411
BstYI	RGATCY	3 cut(s)	1381, 1536, 1987
Bsu15I	ATCGAT	1 cut(s)	1242
BsuRI	GGCC	5 cut(s)	155, 520, 882, 932, 1833
BsuTUI	ATCGAT	1 cut(s)	1242
BtsCI	GGATG	8 cut(s)	988, 1026, 1258, 1429, 1465, 1560, 1702, 1897
BveI	ACCTGC	2 cut(s)	494, 1712
Cac8I	GCNNGC	5 cut(s)	167, 228, 359, 598, 1912
CfoI	GCGC	3 cut(s)	389, 1402, 1916
Cfr10I	RCCGGY	5 cut(s)	138, 226, 353, 1092, 1708
Cfr13I	GGNCC	5 cut(s)	266, 496, 676, 881, 1831
ClaI	ATCGAT	1 cut(s)	1242
CseI	GACGC	4 cut(s)	104, 121, 219, 1225
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	7 cut(s)	244, 775, 1309, 1681, 1782, 1798, 1839
CspAI	ACCGGT	2 cut(s)	138, 1092
CviAII	CATG	7 cut(s)	622, 1032, 1313, 1318, 1729, 1805, 1856
CviQI	GTAC	7 cut(s)	244, 775, 1309, 1681, 1782, 1798, 1839
DdeI	CTNAG	4 cut(s)	11, 240, 849, 1636
DpnI	GATC	8 cut(s)	191, 835, 1241, 1372, 1383, 1538, 1979, 1989
DpnII	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
DraI	TTTAAA	1 cut(s)	1668
DraIII	CACNNNGTG	2 cut(s)	328, 968
DriI	GACNNNNNGTC	2 cut(s)	114, 117
EaeI	YGGCCR	1 cut(s)	153
Eam1104I	CTCTTC	1 cut(s)	401
Eam1105I	GACNNNNNGTC	2 cut(s)	114, 117
EarI	CTCTTC	1 cut(s)	401
EciI	GGCGGA	1 cut(s)	47
Eco147I	AGGCCT	1 cut(s)	520
Eco24I	GRGCYC	1 cut(s)	363
Eco31I	GGTCTC	1 cut(s)	998
Eco47I	GGWCC	3 cut(s)	266, 496, 676
Eco57I	CTGAAG	1 cut(s)	1122
Eco72I	CACGTG	1 cut(s)	1418
Eco91I	GGTNACC	1 cut(s)	1095
EcoO65I	GGTNACC	1 cut(s)	1095
EcoRII	CCWGG	4 cut(s)	556, 950, 964, 1742
EcoT38I	GRGCYC	1 cut(s)	363
Esp3I	CGTCTC	3 cut(s)	7, 53, 1208
FaeI	CATG	7 cut(s)	625, 1035, 1316, 1321, 1732, 1808, 1859
FalI	AAGNNNNNCTT	2 cut(s)	293, 325
FaqI	GGGAC	2 cut(s)	689, 1082
FatI	CATG	7 cut(s)	621, 1031, 1312, 1317, 1728, 1804, 1855
FauI	CCCGC	3 cut(s)	288, 350, 1058
FauNDI	CATATG	6 cut(s)	182, 468, 637, 1011, 1165, 1579
Fnu4HI	GCNGC	5 cut(s)	163, 385, 421, 540, 1908
FokI	GGATG	8 cut(s)	995, 1033, 1265, 1436, 1472, 1547, 1709, 1904
FriOI	GRGCYC	1 cut(s)	363
Fsp4HI	GCNGC	5 cut(s)	163, 385, 421, 540, 1908
FspBI	CTAG	2 cut(s)	1502, 1826
GlaI	GCGC	3 cut(s)	388, 1401, 1915
GluI	GCNGC	5 cut(s)	163, 385, 421, 540, 1908
GsaI	CCCAGC	1 cut(s)	460
GsuI	CTGGAG	2 cut(s)	1765, 1797
HaeII	RGCGCY	1 cut(s)	1917
HaeIII	GGCC	5 cut(s)	155, 520, 882, 932, 1833
HgaI	GACGC	4 cut(s)	104, 121, 219, 1225
HhaI	GCGC	3 cut(s)	389, 1402, 1916
Hin1I	GRCGYC	1 cut(s)	230
Hin1II	CATG	7 cut(s)	625, 1035, 1316, 1321, 1732, 1808, 1859
Hin6I	GCGC	3 cut(s)	387, 1400, 1914
HinP1I	GCGC	3 cut(s)	387, 1400, 1914
HincII	GTYRAC	1 cut(s)	1593
HindII	GTYRAC	1 cut(s)	1593
HinfI	GANTC	2 cut(s)	177, 1037
HpaI	GTTAAC	1 cut(s)	1593
HphI	GGTGA	3 cut(s)	95, 343, 1089
Hpy166II	GTNNAC	3 cut(s)	1593, 1681, 1948
Hpy188III	TCNNGA	4 cut(s)	476, 1088, 1526, 1826
Hpy8I	GTNNAC	3 cut(s)	1593, 1681, 1948
Hpy99I	CGWCG	6 cut(s)	109, 112, 115, 120, 123, 235
HpyAV	CCTTC	6 cut(s)	22, 61, 120, 295, 368, 1779
HpyCH4III	ACNGT	1 cut(s)	1705
HpyCH4IV	ACGT	3 cut(s)	246, 1206, 1417
HpyCH4V	TGCA	7 cut(s)	503, 784, 962, 1124, 1157, 1721, 1948
HpyF10VI	GCNNNNNNNGC	5 cut(s)	211, 227, 593, 1814, 1913
HpyF3I	CTNAG	4 cut(s)	11, 240, 849, 1636
HpySE526I	ACGT	3 cut(s)	246, 1206, 1417
Hsp92I	GRCGYC	1 cut(s)	230
Hsp92II	CATG	7 cut(s)	625, 1035, 1316, 1321, 1732, 1808, 1859
HspAI	GCGC	3 cut(s)	387, 1400, 1914
KpnI	GGTACC	1 cut(s)	1842
KroI	GCCGGC	1 cut(s)	226
KroNI	GCCGGC	1 cut(s)	228
KspAI	GTTAAC	1 cut(s)	1593
Kzo9I	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
LmnI	GCTCC	2 cut(s)	43, 1528
Lsp1109I	GCAGC	3 cut(s)	149, 371, 1919
LweI	GCATC	6 cut(s)	1005, 1111, 1144, 1243, 1414, 1569
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	2 cut(s)	1502, 1826
MaeII	ACGT	3 cut(s)	246, 1206, 1417
MaeIII	GTNAC	4 cut(s)	247, 349, 560, 1095
MalI	GATC	8 cut(s)	191, 835, 1241, 1372, 1383, 1538, 1979, 1989
MboI	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
MboII	GAAGA	5 cut(s)	103, 418, 1115, 1147, 1814
MflI	RGATCY	3 cut(s)	1381, 1536, 1987
MhlI	GDGCHC	4 cut(s)	342, 363, 1855, 1950
MlsI	TGGCCA	1 cut(s)	155
MluI	ACGCGT	1 cut(s)	113
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	1 cut(s)	186
MmeI	TCCRAC	2 cut(s)	101, 300
Mox20I	TGGCCA	1 cut(s)	155
MroNI	GCCGGC	1 cut(s)	226
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	8 cut(s)	581, 858, 1260, 1592, 1667, 1790, 1883, 1898
MslI	CAYNNNNRTG	3 cut(s)	626, 1119, 1293
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	2 cut(s)	1367, 1688
MspCI	CTTAAG	1 cut(s)	1789
Mva1269I	GAATGC	4 cut(s)	1219, 1285, 1613, 1776
MvaI	CCWGG	4 cut(s)	558, 952, 966, 1744
MvnI	CGCG	1 cut(s)	115
MwoI	GCNNNNNNNGC	5 cut(s)	211, 227, 593, 1814, 1913
NaeI	GCCGGC	1 cut(s)	228
NciI	CCSGG	6 cut(s)	81, 285, 326, 342, 1027, 1835
NdeI	CATATG	6 cut(s)	182, 468, 637, 1011, 1165, 1579
NdeII	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
NgoMIV	GCCGGC	1 cut(s)	226
NlaIII	CATG	7 cut(s)	625, 1035, 1316, 1321, 1732, 1808, 1859
NmuCI	GTSAC	3 cut(s)	247, 349, 1095
PceI	AGGCCT	1 cut(s)	520
PcsI	WCGNNNNNNNCGW	1 cut(s)	104
PctI	GAATGC	4 cut(s)	1219, 1285, 1613, 1776
PdiI	GCCGGC	1 cut(s)	228
PfeI	GAWTC	1 cut(s)	1037
PflMI	CCANNNNNTGG	1 cut(s)	1318
PinAI	ACCGGT	2 cut(s)	138, 1092
PkrI	GCNGC	5 cut(s)	164, 386, 422, 541, 1909
PleI	GAGTC	1 cut(s)	185
PmaCI	CACGTG	1 cut(s)	1418
PmlI	CACGTG	1 cut(s)	1418
PpsI	GAGTC	1 cut(s)	185
Ppu21I	YACGTR	2 cut(s)	247, 1418
Psp6I	CCWGG	4 cut(s)	556, 950, 964, 1742
PspCI	CACGTG	1 cut(s)	1418
PspEI	GGTNACC	1 cut(s)	1095
PspFI	CCCAGC	1 cut(s)	456
PspGI	CCWGG	4 cut(s)	556, 950, 964, 1742
PspPI	GGNCC	5 cut(s)	266, 496, 676, 881, 1831
PstI	CTGCAG	1 cut(s)	505
PsuI	RGATCY	3 cut(s)	1381, 1536, 1987
PvuII	CAGCTG	1 cut(s)	1367
RsaI	GTAC	7 cut(s)	245, 776, 1310, 1682, 1783, 1799, 1840
RsaNI	GTAC	7 cut(s)	244, 775, 1309, 1681, 1782, 1798, 1839
RseI	CAYNNNNRTG	3 cut(s)	626, 1119, 1293
SaqAI	TTAA	8 cut(s)	581, 858, 1260, 1592, 1667, 1790, 1883, 1898
SatI	GCNGC	5 cut(s)	163, 385, 421, 540, 1908
Sau3AI	GATC	8 cut(s)	189, 833, 1239, 1370, 1381, 1536, 1977, 1987
Sau96I	GGNCC	5 cut(s)	266, 496, 676, 881, 1831
SbfI	CCTGCAGG	1 cut(s)	505
SchI	GAGTC	1 cut(s)	186
SdaI	CCTGCAGG	1 cut(s)	505
SduI	GDGCHC	4 cut(s)	342, 363, 1855, 1950
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	6 cut(s)	1005, 1111, 1144, 1243, 1414, 1569
SfcI	CTRYAG	1 cut(s)	501
SgrAI	CRCCGGYG	1 cut(s)	353
SinI	GGWCC	3 cut(s)	266, 496, 676
SmiMI	CAYNNNNRTG	3 cut(s)	626, 1119, 1293
SmlI	CTYRAG	1 cut(s)	1789
SmoI	CTYRAG	1 cut(s)	1789
Sse8387I	CCTGCAGG	1 cut(s)	505
SseBI	AGGCCT	1 cut(s)	520
SspI	AATATT	1 cut(s)	1487
SspMI	CTAG	2 cut(s)	1502, 1826
StuI	AGGCCT	1 cut(s)	520
TaaI	ACNGT	1 cut(s)	1705
TaiI	ACGT	3 cut(s)	249, 1209, 1420
TaqI	TCGA	3 cut(s)	188, 363, 1242
TatI	WGTACW	2 cut(s)	774, 1680
TauI	GCSGC	2 cut(s)	423, 542
TfiI	GAWTC	1 cut(s)	1037
Tru1I	TTAA	8 cut(s)	581, 858, 1260, 1592, 1667, 1790, 1883, 1898
Tru9I	TTAA	8 cut(s)	581, 858, 1260, 1592, 1667, 1790, 1883, 1898
TseFI	GTSAC	3 cut(s)	247, 349, 1095
TseI	GCWGC	3 cut(s)	162, 384, 1907
Tsp45I	GTSAC	3 cut(s)	247, 349, 1095
TspDTI	ATGAA	9 cut(s)	498, 624, 806, 884, 1379, 1488, 1713, 1717, 1941
TspGWI	ACGGA	3 cut(s)	31, 77, 266
Van91I	CCANNNNNTGG	1 cut(s)	1318
Vha464I	CTTAAG	1 cut(s)	1789
VneI	GTGCAC	1 cut(s)	1946
VpaK11BI	GGWCC	3 cut(s)	266, 496, 676
XapI	RAATTY	1 cut(s)	37
XbaI	TCTAGA	1 cut(s)	1825
XspI	CTAG	2 cut(s)	1502, 1826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.