Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009041

Physical Location & Seq

Genomic Coordinates Reverse (-)

7236223 .. 7241022

Gene Structure 4800 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46927

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGTCGTTTCTGAGACGGAGAAAGGGGAAGGCGGAGAATTTGGAGCCGGACCACGAGAGTGAGACAGAGAAGGAACACGAACCCGGTGAGGAGAAGAAAACGACGACGCGTCGTCGGAGAAGGAACCCGAACCCGAACCCGAACCGGTGGTCGTGCGTGGCCAACTGCTGCTGGCTCATCGGAGTCATATGCTCGATCTGGTGGTTCCTGCTGTTCTTGCTCAACGCAATGCCGGCGTCGTTTCCTCAGTACGTGACGGAGGCGATAACGGGTCCGGTTTCCGACCCGCCTGGAGTGAAATTGAGGAAGGAGGGCTTGACGGCGAAGCACCCGGTGGTGTTTGTGCCCGGAATTGTCACCGGCGGGCTCGAATTGTGGGAAGGTCATAGCTGCGCCGATGGGTTGTTTAGGAAGAGATTGTGGGGCGGCACATTTGGGGAATTGTATAAAAGACCATTATGCTGGGTTGAACATATGTCTCTGGACAATGAAACTGGACTGGACCCTGCAGGTATAAGGGTTAGGCCTGTATCTGGTCTTGTGGCAGCTGATTACTTTGCCCCTGGTTACTTTGTGTGGGCAGTTTTAATTGCTAATTTGGCTCGCATTGGATATGAGGAGAAGACCATGTATATGGCTTCATATGATTGGAGATTATCGTTTCAGAATACAGAGGTTAGGGACCAAACTTTGAGCAGAATAAAAAGTAATATAGAACTTATGGTAGCTACAAATGGTGGCAACAAGGTGGTTGTTCTCCCACATTCAATGGGTGTTCTGTACTTTCTGCATTTTATGAAATGGGTTGAGGCACCAGCACCAATGGGAGGTGGGGGTGGATCAGATTGGTGTGCTAAGCATATTAAAGCTGTAATGAACATCGGTGGCCCCTTTTTAGGGGTTCCAAAAGCTGTTGCTGGACTTTTCTCTATTGAGGCCAAAGACATTGCTGTTGCCAGGGCTTTTGCACCAGGTGTTTTGGATAAGGATGTTTTTGGTCTCCAAACCTTACAACATATGATGCGGATGACCCGGACATGGGATTCAACTATGTCTATGATACCAAAAGGTGGGGACACAATATGGGGTGGTCTTGACTGGTCACCTGAAGAATACTGCCATTGTGATGCTAAGAAGTTGAAGAATAATGATACCAAAGATGCAGAGCCATATGGAGTAAATTATGGGAGGATTATATCATTTGGGAAAGACGTAGCGGAGACGCATTCCTCCAAGATTGAGAGGATCGATTTTAGGGATGCTGTTAAGGGTAATTTACTTGCGAATGCTACCCATTGTGATGTATGGACAGAGTACCATGACATGGGTGTTGGGGGTGTCAAAGCTGTTTCAGATTACAAAATCTACACAGCTGGATCAATTTTGGATCTGCTTCATTTTGTTGCGCCCAAATTGATGGCACGTGGGGATGCTCATTTTTCGTATGGAATTGCGGACAATTTGGATGACCCCAAGTATGAACACTACAAATATTGGTCAAACCCCCTAGAAACAAGATTACCAAATGCTCCTGATATGGAGATCTATTCTATGTATGGAGTTGGCATCCCTACCGAAAGAGCATACGTGTATAAGTTAACTCCTACTGCTGAATGCTACATTCCCTTTCAAATAGATACCTCAGCAGAGGGTGGAAGCGACAACCCATGTTTAAAAGGTGGAGTGTACTCCGCTGATGGGGATGAAACTGTGCCGGTGTTGAGTGCAGGTTTCATGTGTGCTAAAGCCTGGAGAGGAAAGACCCGTTTCAACCCTTCTGGCATTCGTACTTACTTAAGGGAGTACGATCATGCCCCTCCAGCTAATCTTCTAGAGGGCCGGGGTACCCAAAGTGGTGCTCATGTTGATATAATGGGAAACTTTGCTTTAATTGAGGATGTTTTAAGAGTAGCAGCAGGCGCTACGGGAGATGAATTGGGTGGAGATAAAGTGCACTCTGATATTTTCAAGTGGTCTGAAAGGATCAATATAGATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008080 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046027 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 map00561

Pfam Domains

Protein Families

LCAT

Protein Analysis

666

Amino Acids

73.99

Weight (kDa)

6.2

Isoelectric Point (pI)

40.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	136 - 626	1.3e-62	Lecithin:cholesterol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13640 AT5G13640 AT5G13640
fragaria_vesca	FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180
malus_domestica	MD02G1086400.v1.1 MD15G1213500.v1.1
prunus_persica	Prupe.7G203400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0094251
rosa_laevigata	RLG00000016471
rosa_multiflora	Rmu_co8505711.1_g000001 Rmu_sc0002193.1_g000017 Rmu_sc0006198.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147320
rosa_rugosa	Rorug02G0042500
rosa_samantha	Rh2AG090100 Rh2BG090100 Rh2CG092600 Rh2DG089000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	500, 1718
Acc65I	GGTACC	1 cut(s)	1844
AccB1I	GGYRCC	2 cut(s)	811, 1844
AccB7I	CCANNNNNTGG	2 cut(s)	1070, 1324
AccII	CGCG	1 cut(s)	109
AciI	CCGC	8 cut(s)	32, 287, 363, 426, 1024, 1217, 1454, 1692
AclWI	GGATC	5 cut(s)	847, 1253, 1384, 1395, 1991
AcoI	YGGCCR	1 cut(s)	159
AcsI	RAATTY	1 cut(s)	37
AcuI	CTGAAG	1 cut(s)	1128
AcvI	CACGTG	1 cut(s)	1424
AcyI	GRCGYC	1 cut(s)	236
AdeI	CACNNNGTG	2 cut(s)	334, 974
AfaI	GTAC	7 cut(s)	251, 782, 1316, 1688, 1789, 1805, 1846
AfiI	CCNNNNNNNGG	9 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324, 1698
AflII	CTTAAG	1 cut(s)	1795
AflIII	ACRYGT	2 cut(s)	107, 1587
AgeI	ACCGGT	1 cut(s)	144
AgsI	TTSAA	7 cut(s)	470, 768, 1047, 1141, 1631, 1771, 1969
AhdI	GACNNNNNGTC	2 cut(s)	108, 111
AjnI	CCWGG	5 cut(s)	289, 562, 956, 970, 1748
AleI	CACNNNNGTG	1 cut(s)	57
AluBI	AGCT	8 cut(s)	390, 548, 728, 869, 911, 1346, 1373, 1823
AluI	AGCT	8 cut(s)	390, 548, 728, 869, 911, 1346, 1373, 1823
Alw21I	GWGCWC	2 cut(s)	1861, 1956
Alw26I	GTCTC	5 cut(s)	7, 56, 483, 1004, 1214
Alw44I	GTGCAC	1 cut(s)	1952
AlwI	GGATC	5 cut(s)	847, 1253, 1384, 1395, 1991
AoxI	GGCC	5 cut(s)	159, 524, 886, 936, 1837
ApaLI	GTGCAC	1 cut(s)	1952
ApeKI	GCWGC	4 cut(s)	168, 390, 545, 1913
ApoI	RAATTY	1 cut(s)	37
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
AsiGI	ACCGGT	1 cut(s)	144
Asp718I	GGTACC	1 cut(s)	1844
AspLEI	GCGC	3 cut(s)	395, 1408, 1922
AspS9I	GGNCC	6 cut(s)	49, 272, 502, 682, 887, 1837
AsuC2I	CCSGG	5 cut(s)	84, 332, 348, 1033, 1841
AsuHPI	GGTGA	3 cut(s)	98, 349, 1095
AvaII	GGWCC	4 cut(s)	49, 272, 502, 682
BaeGI	GKGCMC	2 cut(s)	348, 1956
BalI	TGGCCA	1 cut(s)	161
BanI	GGYRCC	2 cut(s)	811, 1844
BanII	GRGCYC	1 cut(s)	369
BauI	CACGAG	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	1424
BbsI	GAAGAC	1 cut(s)	629
Bbv12I	GWGCWC	2 cut(s)	1861, 1956
BbvCI	CCTCAGC	1 cut(s)	1642
BbvI	GCAGC	4 cut(s)	155, 377, 557, 1925
BccI	CCATC	3 cut(s)	392, 1411, 1691
BceAI	ACGGC	1 cut(s)	336
BciT130I	CCWGG	5 cut(s)	291, 564, 958, 972, 1750
BcnI	CCSGG	5 cut(s)	84, 332, 348, 1033, 1841
BcoDI	GTCTC	5 cut(s)	7, 56, 483, 1004, 1214
BfaI	CTAG	2 cut(s)	1508, 1832
BfmI	CTRYAG	1 cut(s)	507
BfoI	RGCGCY	1 cut(s)	1923
BfrI	CTTAAG	1 cut(s)	1795
BfuAI	ACCTGC	2 cut(s)	500, 1718
BglII	AGATCT	2 cut(s)	1542, 1993
BisI	GCNGC	5 cut(s)	169, 391, 427, 546, 1914
BlpI	GCTNAGC	1 cut(s)	855
BlsI	GCNGC	5 cut(s)	170, 392, 428, 547, 1915
Bme18I	GGWCC	4 cut(s)	49, 272, 502, 682
BmeRI	GACNNNNNGTC	2 cut(s)	108, 111
BmgT120I	GGNCC	6 cut(s)	49, 272, 502, 682, 887, 1837
BmsI	GCATC	6 cut(s)	1011, 1117, 1150, 1249, 1420, 1575
BpiI	GAAGAC	1 cut(s)	629
BpmI	CTGGAG	3 cut(s)	312, 1771, 1803
Bpu10I	CCTNAGC	1 cut(s)	1642
Bpu1102I	GCTNAGC	1 cut(s)	855
BpuMI	CCSGG	5 cut(s)	84, 332, 348, 1033, 1841
Bsa29I	ATCGAT	1 cut(s)	1248
BsaAI	YACGTR	3 cut(s)	253, 1424, 1588
BsaHI	GRCGYC	1 cut(s)	236
BsaI	GGTCTC	1 cut(s)	1004
BsaJI	CCNNGG	3 cut(s)	562, 957, 1840
BsaWI	WCCGGW	2 cut(s)	144, 274
BsaXI	ACNNNNNCTCC	2 cut(s)	1935, 1965
Bsc4I	CCNNNNNNNGG	9 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324, 1698
Bse118I	RCCGGY	4 cut(s)	144, 232, 359, 1714
Bse1I	ACTGG	3 cut(s)	499, 504, 1103
Bse3DI	GCAATG	2 cut(s)	234, 945
BseBI	CCWGG	5 cut(s)	291, 564, 958, 972, 1750
BseCI	ATCGAT	1 cut(s)	1248
BseDI	CCNNGG	3 cut(s)	562, 957, 1840
BseGI	GGATG	8 cut(s)	994, 1032, 1264, 1435, 1471, 1566, 1708, 1903
BseLI	CCNNNNNNNGG	9 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324, 1698
BseMI	GCAATG	2 cut(s)	234, 945
BseMII	CTCAG	2 cut(s)	260, 1656
BseNI	ACTGG	3 cut(s)	499, 504, 1103
BseRI	GAGGAG	2 cut(s)	104, 632
BseSI	GKGCMC	2 cut(s)	348, 1956
BseXI	GCAGC	4 cut(s)	155, 377, 557, 1925
BseYI	CCCAGC	1 cut(s)	462
BsgI	GTGCAG	1 cut(s)	1746
Bsh1236I	CGCG	1 cut(s)	109
BshFI	GGCC	5 cut(s)	161, 526, 888, 938, 1839
BshNI	GGYRCC	2 cut(s)	811, 1844
BshTI	ACCGGT	1 cut(s)	144
BshVI	ATCGAT	1 cut(s)	1248
BsiHKAI	GWGCWC	2 cut(s)	1861, 1956
BslFI	GGGAC	2 cut(s)	695, 1088
BslI	CCNNNNNNNGG	9 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324, 1698
BsmAI	GTCTC	5 cut(s)	7, 56, 483, 1004, 1214
BsmBI	CGTCTC	2 cut(s)	7, 1214
BsmFI	GGGAC	2 cut(s)	695, 1088
BsmI	GAATGC	4 cut(s)	1225, 1291, 1619, 1782
BsnI	GGCC	5 cut(s)	161, 526, 888, 938, 1839
Bso31I	GGTCTC	1 cut(s)	1004
Bsp1286I	GDGCHC	4 cut(s)	348, 369, 1861, 1956
Bsp143I	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
Bsp1720I	GCTNAGC	1 cut(s)	855
BspACI	CCGC	8 cut(s)	32, 287, 363, 426, 1024, 1217, 1454, 1692
BspANI	GGCC	5 cut(s)	161, 526, 888, 938, 1839
BspCNI	CTCAG	2 cut(s)	259, 1655
BspDI	ATCGAT	1 cut(s)	1248
BspFNI	CGCG	1 cut(s)	109
BspMAI	CTGCAG	1 cut(s)	511
BspMI	ACCTGC	2 cut(s)	500, 1718
BspPI	GGATC	5 cut(s)	847, 1253, 1384, 1395, 1991
BspT107I	GGYRCC	2 cut(s)	811, 1844
BspTI	CTTAAG	1 cut(s)	1795
BspTNI	GGTCTC	1 cut(s)	1004
BsrDI	GCAATG	2 cut(s)	234, 945
BsrFI	RCCGGY	4 cut(s)	144, 232, 359, 1714
BsrI	ACTGG	3 cut(s)	499, 504, 1103
BssAI	RCCGGY	4 cut(s)	144, 232, 359, 1714
BssECI	CCNNGG	3 cut(s)	562, 957, 1840
BssMI	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
BssNI	GRCGYC	1 cut(s)	236
BssSI	CACGAG	1 cut(s)	53
Bst2BI	CACGAG	1 cut(s)	53
Bst2UI	CCWGG	5 cut(s)	291, 564, 958, 972, 1750
Bst4CI	ACNGT	1 cut(s)	1711
Bst6I	CTCTTC	1 cut(s)	407
BstACI	GRCGYC	1 cut(s)	236
BstAFI	CTTAAG	1 cut(s)	1795
BstBAI	YACGTR	3 cut(s)	253, 1424, 1588
BstC8I	GCNNGC	5 cut(s)	173, 234, 365, 604, 1918
BstDEI	CTNAG	5 cut(s)	11, 246, 855, 1131, 1642
BstEII	GGTNACC	1 cut(s)	1101
BstF5I	GGATG	8 cut(s)	994, 1032, 1264, 1435, 1471, 1566, 1708, 1903
BstFNI	CGCG	1 cut(s)	109
BstH2I	RGCGCY	1 cut(s)	1923
BstHHI	GCGC	3 cut(s)	395, 1408, 1922
BstKTI	GATC	9 cut(s)	198, 842, 1248, 1379, 1390, 1545, 1810, 1986, 1996
BstMAI	GTCTC	5 cut(s)	7, 56, 483, 1004, 1214
BstMBI	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
BstMWI	GCNNNNNNNGC	5 cut(s)	217, 233, 599, 1820, 1919
BstNI	CCWGG	5 cut(s)	291, 564, 958, 972, 1750
BstPI	GGTNACC	1 cut(s)	1101
BstSFI	CTRYAG	1 cut(s)	507
BstSLI	GKGCMC	2 cut(s)	348, 1956
BstUI	CGCG	1 cut(s)	109
BstV1I	GCAGC	4 cut(s)	155, 377, 557, 1925
BstV2I	GAAGAC	1 cut(s)	629
BstX2I	RGATCY	3 cut(s)	1387, 1542, 1993
BstXI	CCANNNNNNTGG	3 cut(s)	462, 634, 1417
BstYI	RGATCY	3 cut(s)	1387, 1542, 1993
Bsu15I	ATCGAT	1 cut(s)	1248
BsuRI	GGCC	5 cut(s)	161, 526, 888, 938, 1839
BsuTUI	ATCGAT	1 cut(s)	1248
BtsCI	GGATG	8 cut(s)	994, 1032, 1264, 1435, 1471, 1566, 1708, 1903
BveI	ACCTGC	2 cut(s)	500, 1718
Cac8I	GCNNGC	5 cut(s)	173, 234, 365, 604, 1918
CfoI	GCGC	3 cut(s)	395, 1408, 1922
Cfr10I	RCCGGY	4 cut(s)	144, 232, 359, 1714
Cfr13I	GGNCC	6 cut(s)	49, 272, 502, 682, 887, 1837
ClaI	ATCGAT	1 cut(s)	1248
CseI	GACGC	4 cut(s)	98, 115, 225, 1231
CsiI	ACCWGGT	1 cut(s)	970
Csp6I	GTAC	7 cut(s)	250, 781, 1315, 1687, 1788, 1804, 1845
CspAI	ACCGGT	1 cut(s)	144
CviAII	CATG	8 cut(s)	628, 1038, 1319, 1324, 1668, 1735, 1811, 1862
CviQI	GTAC	7 cut(s)	250, 781, 1315, 1687, 1788, 1804, 1845
DdeI	CTNAG	5 cut(s)	11, 246, 855, 1131, 1642
DpnI	GATC	9 cut(s)	197, 841, 1247, 1378, 1389, 1544, 1809, 1985, 1995
DpnII	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
DraI	TTTAAA	1 cut(s)	1674
DraIII	CACNNNGTG	2 cut(s)	334, 974
DriI	GACNNNNNGTC	2 cut(s)	108, 111
EaeI	YGGCCR	1 cut(s)	159
Eam1104I	CTCTTC	1 cut(s)	407
Eam1105I	GACNNNNNGTC	2 cut(s)	108, 111
EarI	CTCTTC	1 cut(s)	407
EciI	GGCGGA	1 cut(s)	47
Eco147I	AGGCCT	1 cut(s)	526
Eco24I	GRGCYC	1 cut(s)	369
Eco31I	GGTCTC	1 cut(s)	1004
Eco47I	GGWCC	4 cut(s)	49, 272, 502, 682
Eco57I	CTGAAG	1 cut(s)	1128
Eco72I	CACGTG	1 cut(s)	1424
Eco91I	GGTNACC	1 cut(s)	1101
EcoO65I	GGTNACC	1 cut(s)	1101
EcoRII	CCWGG	5 cut(s)	289, 562, 956, 970, 1748
EcoT38I	GRGCYC	1 cut(s)	369
Esp3I	CGTCTC	2 cut(s)	7, 1214
FaeI	CATG	8 cut(s)	631, 1041, 1322, 1327, 1671, 1738, 1814, 1865
FalI	AAGNNNNNCTT	2 cut(s)	299, 331
FaqI	GGGAC	2 cut(s)	695, 1088
FatI	CATG	8 cut(s)	627, 1037, 1318, 1323, 1667, 1734, 1810, 1861
FauI	CCCGC	2 cut(s)	294, 356
FauNDI	CATATG	5 cut(s)	188, 474, 643, 1017, 1171
Fnu4HI	GCNGC	5 cut(s)	169, 391, 427, 546, 1914
FokI	GGATG	8 cut(s)	1001, 1039, 1271, 1442, 1478, 1553, 1715, 1910
FriOI	GRGCYC	1 cut(s)	369
Fsp4HI	GCNGC	5 cut(s)	169, 391, 427, 546, 1914
FspBI	CTAG	2 cut(s)	1508, 1832
GlaI	GCGC	3 cut(s)	394, 1407, 1921
GluI	GCNGC	5 cut(s)	169, 391, 427, 546, 1914
GsaI	CCCAGC	1 cut(s)	466
GsuI	CTGGAG	3 cut(s)	312, 1771, 1803
HaeII	RGCGCY	1 cut(s)	1923
HaeIII	GGCC	5 cut(s)	161, 526, 888, 938, 1839
HgaI	GACGC	4 cut(s)	98, 115, 225, 1231
HhaI	GCGC	3 cut(s)	395, 1408, 1922
Hin1I	GRCGYC	1 cut(s)	236
Hin1II	CATG	8 cut(s)	631, 1041, 1322, 1327, 1671, 1738, 1814, 1865
Hin6I	GCGC	3 cut(s)	393, 1406, 1920
HinP1I	GCGC	3 cut(s)	393, 1406, 1920
HincII	GTYRAC	1 cut(s)	1599
HindII	GTYRAC	1 cut(s)	1599
HinfI	GANTC	2 cut(s)	183, 1043
HpaI	GTTAAC	1 cut(s)	1599
HphI	GGTGA	3 cut(s)	98, 349, 1095
Hpy166II	GTNNAC	3 cut(s)	1599, 1687, 1954
Hpy188III	TCNNGA	4 cut(s)	482, 1094, 1532, 1832
Hpy8I	GTNNAC	3 cut(s)	1599, 1687, 1954
Hpy99I	CGWCG	5 cut(s)	106, 109, 114, 117, 241
HpyAV	CCTTC	6 cut(s)	22, 64, 114, 301, 374, 1785
HpyCH4III	ACNGT	1 cut(s)	1711
HpyCH4IV	ACGT	4 cut(s)	252, 1212, 1423, 1587
HpyCH4V	TGCA	6 cut(s)	509, 790, 968, 1163, 1727, 1954
HpyF10VI	GCNNNNNNNGC	5 cut(s)	217, 233, 599, 1820, 1919
HpyF3I	CTNAG	5 cut(s)	11, 246, 855, 1131, 1642
HpySE526I	ACGT	4 cut(s)	252, 1212, 1423, 1587
Hsp92I	GRCGYC	1 cut(s)	236
Hsp92II	CATG	8 cut(s)	631, 1041, 1322, 1327, 1671, 1738, 1814, 1865
HspAI	GCGC	3 cut(s)	393, 1406, 1920
KpnI	GGTACC	1 cut(s)	1848
KroI	GCCGGC	1 cut(s)	232
KroNI	GCCGGC	1 cut(s)	234
KspAI	GTTAAC	1 cut(s)	1599
Kzo9I	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
LmnI	GCTCC	2 cut(s)	43, 1534
Lsp1109I	GCAGC	4 cut(s)	155, 377, 557, 1925
LweI	GCATC	6 cut(s)	1011, 1117, 1150, 1249, 1420, 1575
MabI	ACCWGGT	1 cut(s)	970
MaeI	CTAG	2 cut(s)	1508, 1832
MaeII	ACGT	4 cut(s)	252, 1212, 1423, 1587
MaeIII	GTNAC	4 cut(s)	253, 355, 566, 1101
MalI	GATC	9 cut(s)	197, 841, 1247, 1378, 1389, 1544, 1809, 1985, 1995
MboI	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
MboII	GAAGA	6 cut(s)	106, 424, 634, 1121, 1153, 1820
MflI	RGATCY	3 cut(s)	1387, 1542, 1993
MhlI	GDGCHC	4 cut(s)	348, 369, 1861, 1956
MlsI	TGGCCA	1 cut(s)	161
MluI	ACGCGT	1 cut(s)	107
MluNI	TGGCCA	1 cut(s)	161
MlyI	GAGTC	1 cut(s)	192
MmeI	TCCRAC	2 cut(s)	95, 306
Mox20I	TGGCCA	1 cut(s)	161
MroNI	GCCGGC	1 cut(s)	232
MscI	TGGCCA	1 cut(s)	161
MseI	TTAA	8 cut(s)	587, 864, 1266, 1598, 1673, 1796, 1889, 1904
MslI	CAYNNNNRTG	4 cut(s)	57, 632, 1125, 1299
Msp20I	TGGCCA	1 cut(s)	161
MspA1I	CMGCKG	3 cut(s)	548, 1373, 1694
MspCI	CTTAAG	1 cut(s)	1795
Mva1269I	GAATGC	4 cut(s)	1225, 1291, 1619, 1782
MvaI	CCWGG	5 cut(s)	291, 564, 958, 972, 1750
MvnI	CGCG	1 cut(s)	109
MwoI	GCNNNNNNNGC	5 cut(s)	217, 233, 599, 1820, 1919
NaeI	GCCGGC	1 cut(s)	234
NciI	CCSGG	5 cut(s)	84, 332, 348, 1033, 1841
NdeI	CATATG	5 cut(s)	188, 474, 643, 1017, 1171
NdeII	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
NgoMIV	GCCGGC	1 cut(s)	232
NlaIII	CATG	8 cut(s)	631, 1041, 1322, 1327, 1671, 1738, 1814, 1865
NmuCI	GTSAC	3 cut(s)	253, 355, 1101
OliI	CACNNNNGTG	1 cut(s)	57
PceI	AGGCCT	1 cut(s)	526
PctI	GAATGC	4 cut(s)	1225, 1291, 1619, 1782
PdiI	GCCGGC	1 cut(s)	234
PfeI	GAWTC	1 cut(s)	1043
PflMI	CCANNNNNTGG	2 cut(s)	1070, 1324
PinAI	ACCGGT	1 cut(s)	144
PkrI	GCNGC	5 cut(s)	170, 392, 428, 547, 1915
PleI	GAGTC	1 cut(s)	191
PmaCI	CACGTG	1 cut(s)	1424
PmlI	CACGTG	1 cut(s)	1424
PpsI	GAGTC	1 cut(s)	191
Ppu21I	YACGTR	3 cut(s)	253, 1424, 1588
Psp6I	CCWGG	5 cut(s)	289, 562, 956, 970, 1748
PspCI	CACGTG	1 cut(s)	1424
PspEI	GGTNACC	1 cut(s)	1101
PspFI	CCCAGC	1 cut(s)	462
PspGI	CCWGG	5 cut(s)	289, 562, 956, 970, 1748
PspPI	GGNCC	6 cut(s)	49, 272, 502, 682, 887, 1837
PstI	CTGCAG	1 cut(s)	511
PsuI	RGATCY	3 cut(s)	1387, 1542, 1993
PvuII	CAGCTG	2 cut(s)	548, 1373
RsaI	GTAC	7 cut(s)	251, 782, 1316, 1688, 1789, 1805, 1846
RsaNI	GTAC	7 cut(s)	250, 781, 1315, 1687, 1788, 1804, 1845
RseI	CAYNNNNRTG	4 cut(s)	57, 632, 1125, 1299
SaqAI	TTAA	8 cut(s)	587, 864, 1266, 1598, 1673, 1796, 1889, 1904
SatI	GCNGC	5 cut(s)	169, 391, 427, 546, 1914
Sau3AI	GATC	9 cut(s)	195, 839, 1245, 1376, 1387, 1542, 1807, 1983, 1993
Sau96I	GGNCC	6 cut(s)	49, 272, 502, 682, 887, 1837
SbfI	CCTGCAGG	1 cut(s)	511
SchI	GAGTC	1 cut(s)	192
SdaI	CCTGCAGG	1 cut(s)	511
SduI	GDGCHC	4 cut(s)	348, 369, 1861, 1956
SexAI	ACCWGGT	1 cut(s)	970
SfaNI	GCATC	6 cut(s)	1011, 1117, 1150, 1249, 1420, 1575
SfcI	CTRYAG	1 cut(s)	507
SgrAI	CRCCGGYG	1 cut(s)	359
SinI	GGWCC	4 cut(s)	49, 272, 502, 682
SmiMI	CAYNNNNRTG	4 cut(s)	57, 632, 1125, 1299
SmlI	CTYRAG	1 cut(s)	1795
SmoI	CTYRAG	1 cut(s)	1795
Sse8387I	CCTGCAGG	1 cut(s)	511
SseBI	AGGCCT	1 cut(s)	526
SsiI	CCGC	8 cut(s)	32, 287, 363, 426, 1024, 1217, 1454, 1692
SspI	AATATT	1 cut(s)	1493
SspMI	CTAG	2 cut(s)	1508, 1832
StuI	AGGCCT	1 cut(s)	526
TaaI	ACNGT	1 cut(s)	1711
TaiI	ACGT	4 cut(s)	255, 1215, 1426, 1590
TaqI	TCGA	3 cut(s)	194, 369, 1248
TatI	WGTACW	2 cut(s)	780, 1686
TauI	GCSGC	1 cut(s)	429
TfiI	GAWTC	1 cut(s)	1043
Tru1I	TTAA	8 cut(s)	587, 864, 1266, 1598, 1673, 1796, 1889, 1904
Tru9I	TTAA	8 cut(s)	587, 864, 1266, 1598, 1673, 1796, 1889, 1904
TseFI	GTSAC	3 cut(s)	253, 355, 1101
TseI	GCWGC	4 cut(s)	168, 390, 545, 1913
Tsp45I	GTSAC	3 cut(s)	253, 355, 1101
TspDTI	ATGAA	9 cut(s)	504, 630, 812, 890, 1385, 1494, 1719, 1723, 1947
TspGWI	ACGGA	2 cut(s)	31, 272
Van91I	CCANNNNNTGG	2 cut(s)	1070, 1324
Vha464I	CTTAAG	1 cut(s)	1795
VneI	GTGCAC	1 cut(s)	1952
VpaK11BI	GGWCC	4 cut(s)	49, 272, 502, 682
XapI	RAATTY	1 cut(s)	37
XbaI	TCTAGA	1 cut(s)	1831
XspI	CTAG	2 cut(s)	1508, 1832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.