Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0009041

Physical Location & Seq

Genomic Coordinates Reverse (-)

4326855 .. 4331845

Gene Structure 4991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g08180.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGTCGTTTTTGAGGCGGAGAAAGGGGAGGGAGGAGAAAGCGGCGGAGGTTTCGCAGGCGGAAGACGACAGCGAGGAGACGGAGAAGGAGCACGAGAGCGGGAAGAAAACGGCGCGTCGTAAAAGGAAGGAGGCGAGGGCGAACCGGTGGTCGTGCGTTTCGAATTGCTGCTGGCTCATCGGAGTCATATGCTCGATCTGGTGGTTTCTTCTGTTCTTGCTCAACGCAATGCCGGCTTCGTTTCCTCAGTACGTGACGGAGGCGATCACCGGTCCGGTGCCGGACCCGCCGGGAGTGAAATTGAGGAAGGAGGGGCTGGCGGCGAAGCATCCGGTGGTGTTTGTGCCCGGAATTGTCACCGGCGGGCTGGAATTGTGGGAAGGGCATAGCTGCGCCGATGGGTTGTTTCGGAAGAGACTCTGGGGCGGCACGTTTGGGGAGTTGTATAAAAGACCGTTGTGCTGGGTTGAACATATGTCTCTGGACAATGAAACTGGACTGGACCCTGAAGGTATAAGGGTTAGGCCTGTATCTGGTCTTGTGGCAGCTGATTACTTTGCCCCCGGTTACTTTGTTTGGGCAGTTTTAATTGCTAATTTGGCTCGCATTGGATATGAGGAGAAAACCATGTATATGGCTTCATACGATTGGAGATTATCGTTCCAGAATACAGAGGTTAGGGACCAATCTTTAAGCAGAATAAAAAGTAATATAGAACTTATGGTATCTACAAATGGTGGTAACAAGGTGGTTGTTCTCCCACACTCAATGGGTGTTCTATACTTTTTGCATTTTATGAAATGGGTTGAGGCACCAGCACCGATGGGAGGTGGCGGTGGATCAGATTGGTGTGCCAAGCATATTAAAGCTGTAATGAACATCGGTGGACCCTTTTTAGGGGTTCCAAAAGCTGTTGCAGGACTTTTCTCCATTGAGGCCAAAGACATTGCGGTTGCCAGGGCTTTTGCACCAGGTGTTTTGGATAAGGATGTTTTTGGTCTCCAAACCTTGCAACATATGATGCGGATGACCCGGACATGGGATTCAACTATGTCTATGCTACCAAAAGGCGGGGACACAATTTGGGGTGGTCTTGACTGGTCACCTGAAGGCAACTGTAATTGCAATGTGAAGAAGGTGAAGAATAATGATACCAACGTTGCAGAACCATATAGAGTAAATTATGGGAGGATGATATCATTTGGGAAAGACGTGGCGGAGACACATTCCTCCAAGATTGAGAGGATCGATTTTAGGGATGCTGTGAAGGGTCATTTACTAGCGAATGCTACCCATTGTGATGTATGGACAGAGTACCATGAAATGGGTGTCGGGGGTGTCAAAGCCGTTGCAGATTACAAAATCTACACAGCTGGATCAATTTTGGATCTGCTTCATTTTGTTGCGCCCAAATTGATGACACGTGGGGATGCTCATTTTTCATATGGAATTGCGGACAATTTGGATGACCCCAAGTATGAACACTACAAATATTGGTCAAACCCCCTAGAAACAAGATTACCAAATGCTCCTGAAATGGAGATGTATTCTCTGTATGGAGTGGGAATCCCAACGGAAAGAGCGTATGTGTATAAGTTAACTCCTGCTGCTGAATGCTACATTCCCTTTCAAATAGATACCTCAGCAGATGGTGGAAGTGACAACCCATGTTTAAAAGGTGGAGTGTACTCTGCTGATGGGGATGAAACTGTCCCCGTCTTGAGTGCAGGTTTTATGTGTGCTAAAGCCTGGAGAGGAAAAACCCGATTCAACCCTTTTGGCATTCGTACTTACTTAAGGGAATATGATCATGCTCCTCCAGCTAATCTTCTAGAGGGCCGGGGTACCCAAAGCGGTGCTCATGTTGATATAATGGGGAACTTTGCATTAATTGAGGATGTTTTAAGAGTAGCAGCAGGCGCTACTGGAGATGAATTGGGTGGAGATAAAGTGCACTCTGATATTTTCAAGTGGTCTGAAAGGATCAATTTAGATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008080 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046027 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 map00561

Pfam Domains

Protein Families

LCAT

Protein Analysis

667

Amino Acids

73.95

Weight (kDa)

6.34

Isoelectric Point (pI)

38.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LCAT	PF02450	3 - 468	3e-57	Lecithin:cholesterol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13640 AT5G13640 AT5G13640
fragaria_vesca	FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180 FvH4_1g08180
malus_domestica	MD02G1086400.v1.1 MD15G1213500.v1.1
prunus_persica	Prupe.7G203400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0094251
rosa_laevigata	RLG00000016471
rosa_multiflora	Rmu_co8505711.1_g000001 Rmu_sc0002193.1_g000017 Rmu_sc0006198.1_g000006
rosa_roxburghii	Rroxscaffold_2G00147320
rosa_rugosa	Rorug02G0042500
rosa_samantha	Rh2AG090100 Rh2BG090100 Rh2CG092600 Rh2DG089000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1718
Acc65I	GGTACC	1 cut(s)	1844
AccB1I	GGYRCC	3 cut(s)	277, 811, 1844
AccB7I	CCANNNNNTGG	1 cut(s)	1324
AccBSI	CCGCTC	1 cut(s)	99
AccII	CGCG	1 cut(s)	115
AclI	AACGTT	1 cut(s)	1158
AclWI	GGATC	5 cut(s)	847, 1253, 1384, 1395, 1991
AcuI	CTGAAG	2 cut(s)	528, 1128
AcvI	CACGTG	1 cut(s)	1424
AdeI	CACNNNGTG	1 cut(s)	974
AfaI	GTAC	5 cut(s)	251, 1316, 1688, 1789, 1846
AfiI	CCNNNNNNNGG	8 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324
AflII	CTTAAG	1 cut(s)	1795
AflIII	ACRYGT	1 cut(s)	1421
AgeI	ACCGGT	2 cut(s)	144, 269
AgsI	TTSAA	5 cut(s)	470, 1047, 1631, 1771, 1969
AjiI	CACGTC	1 cut(s)	1213
AjnI	CCWGG	3 cut(s)	956, 970, 1748
AluBI	AGCT	6 cut(s)	390, 548, 869, 911, 1373, 1823
AluI	AGCT	6 cut(s)	390, 548, 869, 911, 1373, 1823
Alw21I	GWGCWC	3 cut(s)	93, 1861, 1956
Alw26I	GTCTC	5 cut(s)	71, 409, 483, 1004, 1214
Alw44I	GTGCAC	1 cut(s)	1952
AlwI	GGATC	5 cut(s)	847, 1253, 1384, 1395, 1991
AoxI	GGCC	3 cut(s)	524, 936, 1837
ApaLI	GTGCAC	1 cut(s)	1952
ApeKI	GCWGC	5 cut(s)	168, 390, 545, 1607, 1913
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
AseI	ATTAAT	1 cut(s)	1889
AsiGI	ACCGGT	2 cut(s)	144, 269
Asp718I	GGTACC	1 cut(s)	1844
AspLEI	GCGC	4 cut(s)	115, 395, 1408, 1922
AspS9I	GGNCC	6 cut(s)	272, 283, 502, 682, 887, 1837
AsuC2I	CCSGG	5 cut(s)	291, 348, 564, 1033, 1841
AsuHPI	GGTGA	4 cut(s)	259, 349, 1095, 1150
AsuII	TTCGAA	1 cut(s)	161
AvaII	GGWCC	5 cut(s)	272, 283, 502, 682, 887
BaeGI	GKGCMC	2 cut(s)	348, 1956
BaeI	ACNNNNGTAYC	2 cut(s)	1143, 1176
BanI	GGYRCC	3 cut(s)	277, 811, 1844
BauI	CACGAG	1 cut(s)	92
BbrPI	CACGTG	1 cut(s)	1424
BbsI	GAAGAC	1 cut(s)	69
Bbv12I	GWGCWC	3 cut(s)	93, 1861, 1956
BbvCI	CCTCAGC	1 cut(s)	1642
BbvI	GCAGC	5 cut(s)	155, 377, 557, 1594, 1925
BccI	CCATC	4 cut(s)	392, 817, 1643, 1691
BceAI	ACGGC	2 cut(s)	126, 1331
BciT130I	CCWGG	3 cut(s)	958, 972, 1750
BclI	TGATCA	1 cut(s)	1807
BcnI	CCSGG	5 cut(s)	291, 348, 564, 1033, 1841
BcoDI	GTCTC	5 cut(s)	71, 409, 483, 1004, 1214
BfaI	CTAG	3 cut(s)	1280, 1508, 1832
BfoI	RGCGCY	1 cut(s)	1923
BfrI	CTTAAG	1 cut(s)	1795
BfuAI	ACCTGC	1 cut(s)	1718
BglII	AGATCT	1 cut(s)	1993
BisI	GCNGC	8 cut(s)	42, 169, 321, 391, 427, 546, 1608, 1914
BlsI	GCNGC	8 cut(s)	43, 170, 322, 392, 428, 547, 1609, 1915
Bme1390I	CCNGG	8 cut(s)	291, 348, 564, 958, 972, 1033, 1750, 1841
Bme18I	GGWCC	5 cut(s)	272, 283, 502, 682, 887
BmgBI	CACGTC	1 cut(s)	1213
BmgT120I	GGNCC	6 cut(s)	272, 283, 502, 682, 887, 1837
BmiI	GGNNCC	8 cut(s)	279, 285, 504, 683, 813, 889, 903, 1846
BmrFI	CCNGG	8 cut(s)	291, 348, 564, 958, 972, 1033, 1750, 1841
BmsI	GCATC	4 cut(s)	337, 1011, 1249, 1420
BpiI	GAAGAC	1 cut(s)	69
BpmI	CTGGAG	3 cut(s)	1771, 1803, 1947
Bpu10I	CCTNAGC	1 cut(s)	1642
Bpu14I	TTCGAA	1 cut(s)	161
BpuEI	CTTGAG	1 cut(s)	1741
BpuMI	CCSGG	5 cut(s)	291, 348, 564, 1033, 1841
Bsa29I	ATCGAT	1 cut(s)	1248
BsaAI	YACGTR	2 cut(s)	253, 1424
BsaI	GGTCTC	1 cut(s)	1004
BsaJI	CCNNGG	3 cut(s)	562, 957, 1840
BsaWI	WCCGGW	4 cut(s)	144, 269, 274, 331
BsaXI	ACNNNNNCTCC	2 cut(s)	1935, 1965
Bsc4I	CCNNNNNNNGG	8 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324
Bse118I	RCCGGY	4 cut(s)	144, 232, 269, 359
Bse1I	ACTGG	4 cut(s)	499, 504, 1103, 1930
Bse3DI	GCAATG	3 cut(s)	234, 945, 1132
BseBI	CCWGG	3 cut(s)	958, 972, 1750
BseCI	ATCGAT	1 cut(s)	1248
BseDI	CCNNGG	3 cut(s)	562, 957, 1840
BseGI	GGATG	9 cut(s)	328, 994, 1032, 1197, 1264, 1435, 1471, 1708, 1903
BseLI	CCNNNNNNNGG	8 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324
BseMI	GCAATG	3 cut(s)	234, 945, 1132
BseMII	CTCAG	2 cut(s)	260, 1656
BseNI	ACTGG	4 cut(s)	499, 504, 1103, 1930
BseRI	GAGGAG	4 cut(s)	47, 89, 632, 1806
BseSI	GKGCMC	2 cut(s)	348, 1956
BseXI	GCAGC	5 cut(s)	155, 377, 557, 1594, 1925
BseYI	CCCAGC	1 cut(s)	462
BsgI	GTGCAG	1 cut(s)	1746
Bsh1236I	CGCG	1 cut(s)	115
BshFI	GGCC	3 cut(s)	526, 938, 1839
BshNI	GGYRCC	3 cut(s)	277, 811, 1844
BshTI	ACCGGT	2 cut(s)	144, 269
BshVI	ATCGAT	1 cut(s)	1248
BsiHKAI	GWGCWC	3 cut(s)	93, 1861, 1956
BslFI	GGGAC	3 cut(s)	695, 1088, 1697
BslI	CCNNNNNNNGG	8 cut(s)	533, 827, 896, 897, 1038, 1039, 1070, 1324
BsmAI	GTCTC	5 cut(s)	71, 409, 483, 1004, 1214
BsmBI	CGTCTC	1 cut(s)	71
BsmFI	GGGAC	3 cut(s)	695, 1088, 1697
BsmI	GAATGC	3 cut(s)	1291, 1619, 1782
BsnI	GGCC	3 cut(s)	526, 938, 1839
Bso31I	GGTCTC	1 cut(s)	1004
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	4 cut(s)	93, 348, 1861, 1956
Bsp143I	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
BspANI	GGCC	3 cut(s)	526, 938, 1839
BspCNI	CTCAG	2 cut(s)	259, 1655
BspDI	ATCGAT	1 cut(s)	1248
BspFNI	CGCG	1 cut(s)	115
BspLI	GGNNCC	8 cut(s)	279, 285, 504, 683, 813, 889, 903, 1846
BspMI	ACCTGC	1 cut(s)	1718
BspPI	GGATC	5 cut(s)	847, 1253, 1384, 1395, 1991
BspT104I	TTCGAA	1 cut(s)	161
BspT107I	GGYRCC	3 cut(s)	277, 811, 1844
BspTI	CTTAAG	1 cut(s)	1795
BspTNI	GGTCTC	1 cut(s)	1004
BsrBI	CCGCTC	1 cut(s)	99
BsrDI	GCAATG	3 cut(s)	234, 945, 1132
BsrFI	RCCGGY	4 cut(s)	144, 232, 269, 359
BsrI	ACTGG	4 cut(s)	499, 504, 1103, 1930
BssAI	RCCGGY	4 cut(s)	144, 232, 269, 359
BssECI	CCNNGG	3 cut(s)	562, 957, 1840
BssMI	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
BssSI	CACGAG	1 cut(s)	92
Bst2BI	CACGAG	1 cut(s)	92
Bst2UI	CCWGG	3 cut(s)	958, 972, 1750
Bst4CI	ACNGT	3 cut(s)	456, 1118, 1711
Bst6I	CTCTTC	1 cut(s)	407
BstAFI	CTTAAG	1 cut(s)	1795
BstBAI	YACGTR	2 cut(s)	253, 1424
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	7 cut(s)	57, 173, 234, 318, 365, 604, 1918
BstDEI	CTNAG	2 cut(s)	246, 1642
BstEII	GGTNACC	1 cut(s)	1101
BstF5I	GGATG	9 cut(s)	328, 994, 1032, 1197, 1264, 1435, 1471, 1708, 1903
BstFNI	CGCG	1 cut(s)	115
BstH2I	RGCGCY	1 cut(s)	1923
BstHHI	GCGC	4 cut(s)	115, 395, 1408, 1922
BstKTI	GATC	9 cut(s)	198, 267, 842, 1248, 1379, 1390, 1810, 1986, 1996
BstMAI	GTCTC	5 cut(s)	71, 409, 483, 1004, 1214
BstMBI	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
BstMWI	GCNNNNNNNGC	5 cut(s)	233, 286, 599, 1820, 1919
BstNI	CCWGG	3 cut(s)	958, 972, 1750
BstPI	GGTNACC	1 cut(s)	1101
BstSCI	CCNGG	8 cut(s)	289, 346, 562, 956, 970, 1031, 1748, 1839
BstSLI	GKGCMC	2 cut(s)	348, 1956
BstUI	CGCG	1 cut(s)	115
BstV1I	GCAGC	5 cut(s)	155, 377, 557, 1594, 1925
BstV2I	GAAGAC	1 cut(s)	69
BstX2I	RGATCY	2 cut(s)	1387, 1993
BstXI	CCANNNNNNTGG	1 cut(s)	634
BstYI	RGATCY	2 cut(s)	1387, 1993
Bsu15I	ATCGAT	1 cut(s)	1248
BsuRI	GGCC	3 cut(s)	526, 938, 1839
BsuTUI	ATCGAT	1 cut(s)	1248
BtrI	CACGTC	1 cut(s)	1213
BtsCI	GGATG	9 cut(s)	328, 994, 1032, 1197, 1264, 1435, 1471, 1708, 1903
BveI	ACCTGC	1 cut(s)	1718
Cac8I	GCNNGC	7 cut(s)	57, 173, 234, 318, 365, 604, 1918
CfoI	GCGC	4 cut(s)	115, 395, 1408, 1922
Cfr10I	RCCGGY	4 cut(s)	144, 232, 269, 359
Cfr13I	GGNCC	6 cut(s)	272, 283, 502, 682, 887, 1837
ClaI	ATCGAT	1 cut(s)	1248
CpoI	CGGWCCG	1 cut(s)	272
CseI	GACGC	1 cut(s)	104
CsiI	ACCWGGT	1 cut(s)	970
Csp6I	GTAC	5 cut(s)	250, 1315, 1687, 1788, 1845
CspAI	ACCGGT	2 cut(s)	144, 269
CspI	CGGWCCG	1 cut(s)	272
CviAII	CATG	6 cut(s)	628, 1038, 1319, 1668, 1811, 1862
CviQI	GTAC	5 cut(s)	250, 1315, 1687, 1788, 1845
DdeI	CTNAG	2 cut(s)	246, 1642
DpnI	GATC	9 cut(s)	197, 266, 841, 1247, 1378, 1389, 1809, 1985, 1995
DpnII	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
DraI	TTTAAA	1 cut(s)	1674
DraIII	CACNNNGTG	1 cut(s)	974
Eam1104I	CTCTTC	1 cut(s)	407
EarI	CTCTTC	1 cut(s)	407
EciI	GGCGGA	4 cut(s)	31, 59, 74, 1232
Eco147I	AGGCCT	1 cut(s)	526
Eco31I	GGTCTC	1 cut(s)	1004
Eco32I	GATATC	1 cut(s)	1197
Eco47I	GGWCC	5 cut(s)	272, 283, 502, 682, 887
Eco57I	CTGAAG	2 cut(s)	528, 1128
Eco72I	CACGTG	1 cut(s)	1424
Eco91I	GGTNACC	1 cut(s)	1101
EcoO65I	GGTNACC	1 cut(s)	1101
EcoRII	CCWGG	3 cut(s)	956, 970, 1748
EcoRV	GATATC	1 cut(s)	1197
Esp3I	CGTCTC	1 cut(s)	71
FaeI	CATG	6 cut(s)	631, 1041, 1322, 1671, 1814, 1865
FaqI	GGGAC	3 cut(s)	695, 1088, 1697
FatI	CATG	6 cut(s)	627, 1037, 1318, 1667, 1810, 1861
FauI	CCCGC	4 cut(s)	92, 294, 356, 1064
FauNDI	CATATG	4 cut(s)	188, 474, 1017, 1444
FbaI	TGATCA	1 cut(s)	1807
Fnu4HI	GCNGC	8 cut(s)	42, 169, 321, 391, 427, 546, 1608, 1914
FokI	GGATG	9 cut(s)	315, 1001, 1039, 1204, 1271, 1442, 1478, 1715, 1910
Fsp4HI	GCNGC	8 cut(s)	42, 169, 321, 391, 427, 546, 1608, 1914
FspBI	CTAG	3 cut(s)	1280, 1508, 1832
GlaI	GCGC	4 cut(s)	114, 394, 1407, 1921
GluI	GCNGC	8 cut(s)	42, 169, 321, 391, 427, 546, 1608, 1914
GsaI	CCCAGC	1 cut(s)	466
GsuI	CTGGAG	3 cut(s)	1771, 1803, 1947
HaeII	RGCGCY	1 cut(s)	1923
HaeIII	GGCC	3 cut(s)	526, 938, 1839
HgaI	GACGC	1 cut(s)	104
HhaI	GCGC	4 cut(s)	115, 395, 1408, 1922
Hin1II	CATG	6 cut(s)	631, 1041, 1322, 1671, 1814, 1865
Hin6I	GCGC	4 cut(s)	113, 393, 1406, 1920
HinP1I	GCGC	4 cut(s)	113, 393, 1406, 1920
HincII	GTYRAC	1 cut(s)	1599
HindII	GTYRAC	1 cut(s)	1599
HinfI	GANTC	5 cut(s)	183, 417, 1043, 1566, 1767
HpaI	GTTAAC	1 cut(s)	1599
HphI	GGTGA	4 cut(s)	259, 349, 1095, 1150
Hpy166II	GTNNAC	4 cut(s)	887, 1599, 1687, 1954
Hpy188I	TCNGA	6 cut(s)	182, 411, 844, 1960, 1978, 2000
Hpy188III	TCNNGA	6 cut(s)	482, 664, 1094, 1532, 1720, 1832
Hpy8I	GTNNAC	4 cut(s)	887, 1599, 1687, 1954
Hpy99I	CGWCG	1 cut(s)	120
HpyAV	CCTTC	8 cut(s)	79, 121, 301, 374, 503, 1103, 1129, 1261
HpyCH4III	ACNGT	3 cut(s)	456, 1118, 1711
HpyCH4IV	ACGT	5 cut(s)	252, 431, 1158, 1212, 1423
HpyF10VI	GCNNNNNNNGC	5 cut(s)	233, 286, 599, 1820, 1919
HpyF3I	CTNAG	2 cut(s)	246, 1642
HpySE526I	ACGT	5 cut(s)	252, 431, 1158, 1212, 1423
Hsp92II	CATG	6 cut(s)	631, 1041, 1322, 1671, 1814, 1865
HspAI	GCGC	4 cut(s)	113, 393, 1406, 1920
KpnI	GGTACC	1 cut(s)	1848
KroI	GCCGGC	1 cut(s)	232
KroNI	GCCGGC	1 cut(s)	234
Ksp22I	TGATCA	1 cut(s)	1807
KspAI	GTTAAC	1 cut(s)	1599
Kzo9I	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
LmnI	GCTCC	3 cut(s)	88, 1534, 1819
Lsp1109I	GCAGC	5 cut(s)	155, 377, 557, 1594, 1925
LweI	GCATC	4 cut(s)	337, 1011, 1249, 1420
MabI	ACCWGGT	1 cut(s)	970
MaeI	CTAG	3 cut(s)	1280, 1508, 1832
MaeII	ACGT	5 cut(s)	252, 431, 1158, 1212, 1423
MaeIII	GTNAC	6 cut(s)	253, 355, 566, 740, 1101, 1658
MalI	GATC	9 cut(s)	197, 266, 841, 1247, 1378, 1389, 1809, 1985, 1995
MbiI	CCGCTC	1 cut(s)	99
MboI	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
MboII	GAAGA	7 cut(s)	74, 115, 200, 424, 1144, 1153, 1820
MflI	RGATCY	2 cut(s)	1387, 1993
MhlI	GDGCHC	4 cut(s)	93, 348, 1861, 1956
MlyI	GAGTC	2 cut(s)	192, 411
MroNI	GCCGGC	1 cut(s)	232
MseI	TTAA	8 cut(s)	587, 692, 864, 1598, 1673, 1796, 1889, 1904
MslI	CAYNNNNRTG	2 cut(s)	632, 1299
MspA1I	CMGCKG	2 cut(s)	548, 1373
MspCI	CTTAAG	1 cut(s)	1795
MspR9I	CCNGG	8 cut(s)	291, 348, 564, 958, 972, 1033, 1750, 1841
Mva1269I	GAATGC	3 cut(s)	1291, 1619, 1782
MvaI	CCWGG	3 cut(s)	958, 972, 1750
MvnI	CGCG	1 cut(s)	115
MwoI	GCNNNNNNNGC	5 cut(s)	233, 286, 599, 1820, 1919
NaeI	GCCGGC	1 cut(s)	234
NciI	CCSGG	5 cut(s)	291, 348, 564, 1033, 1841
NdeI	CATATG	4 cut(s)	188, 474, 1017, 1444
NdeII	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
NgoMIV	GCCGGC	1 cut(s)	232
NlaIII	CATG	6 cut(s)	631, 1041, 1322, 1671, 1814, 1865
NlaIV	GGNNCC	8 cut(s)	279, 285, 504, 683, 813, 889, 903, 1846
NmuCI	GTSAC	4 cut(s)	253, 355, 1101, 1658
NspV	TTCGAA	1 cut(s)	161
PceI	AGGCCT	1 cut(s)	526
PcsI	WCGNNNNNNNCGW	2 cut(s)	158, 1580
PctI	GAATGC	3 cut(s)	1291, 1619, 1782
PdiI	GCCGGC	1 cut(s)	234
PfeI	GAWTC	3 cut(s)	1043, 1566, 1767
PflMI	CCANNNNNTGG	1 cut(s)	1324
PinAI	ACCGGT	2 cut(s)	144, 269
PkrI	GCNGC	8 cut(s)	43, 170, 322, 392, 428, 547, 1609, 1915
PleI	GAGTC	2 cut(s)	191, 411
PmaCI	CACGTG	1 cut(s)	1424
PmlI	CACGTG	1 cut(s)	1424
PpsI	GAGTC	2 cut(s)	191, 411
Ppu21I	YACGTR	2 cut(s)	253, 1424
PshBI	ATTAAT	1 cut(s)	1889
Psp1406I	AACGTT	1 cut(s)	1158
Psp6I	CCWGG	3 cut(s)	956, 970, 1748
PspCI	CACGTG	1 cut(s)	1424
PspEI	GGTNACC	1 cut(s)	1101
PspFI	CCCAGC	1 cut(s)	462
PspGI	CCWGG	3 cut(s)	956, 970, 1748
PspN4I	GGNNCC	8 cut(s)	279, 285, 504, 683, 813, 889, 903, 1846
PspPI	GGNCC	6 cut(s)	272, 283, 502, 682, 887, 1837
PsuI	RGATCY	2 cut(s)	1387, 1993
PvuII	CAGCTG	2 cut(s)	548, 1373
RsaI	GTAC	5 cut(s)	251, 1316, 1688, 1789, 1846
RsaNI	GTAC	5 cut(s)	250, 1315, 1687, 1788, 1845
RseI	CAYNNNNRTG	2 cut(s)	632, 1299
Rsr2I	CGGWCCG	1 cut(s)	272
RsrII	CGGWCCG	1 cut(s)	272
SaqAI	TTAA	8 cut(s)	587, 692, 864, 1598, 1673, 1796, 1889, 1904
SatI	GCNGC	8 cut(s)	42, 169, 321, 391, 427, 546, 1608, 1914
Sau3AI	GATC	9 cut(s)	195, 264, 839, 1245, 1376, 1387, 1807, 1983, 1993
Sau96I	GGNCC	6 cut(s)	272, 283, 502, 682, 887, 1837
SchI	GAGTC	2 cut(s)	192, 411
ScrFI	CCNGG	8 cut(s)	291, 348, 564, 958, 972, 1033, 1750, 1841
SduI	GDGCHC	4 cut(s)	93, 348, 1861, 1956
SexAI	ACCWGGT	1 cut(s)	970
SfaNI	GCATC	4 cut(s)	337, 1011, 1249, 1420
SfuI	TTCGAA	1 cut(s)	161
SgrAI	CRCCGGYG	1 cut(s)	359
SinI	GGWCC	5 cut(s)	272, 283, 502, 682, 887
SmiMI	CAYNNNNRTG	2 cut(s)	632, 1299
SmlI	CTYRAG	2 cut(s)	1720, 1795
SmoI	CTYRAG	2 cut(s)	1720, 1795
SseBI	AGGCCT	1 cut(s)	526
SspI	AATATT	1 cut(s)	1493
SspMI	CTAG	3 cut(s)	1280, 1508, 1832
StuI	AGGCCT	1 cut(s)	526
StyD4I	CCNGG	8 cut(s)	289, 346, 562, 956, 970, 1031, 1748, 1839
TaaI	ACNGT	3 cut(s)	456, 1118, 1711
TaiI	ACGT	5 cut(s)	255, 434, 1161, 1215, 1426
TaqI	TCGA	3 cut(s)	161, 194, 1248
TatI	WGTACW	1 cut(s)	1686
TauI	GCSGC	3 cut(s)	44, 323, 429
TfiI	GAWTC	3 cut(s)	1043, 1566, 1767
Tru1I	TTAA	8 cut(s)	587, 692, 864, 1598, 1673, 1796, 1889, 1904
Tru9I	TTAA	8 cut(s)	587, 692, 864, 1598, 1673, 1796, 1889, 1904
TseFI	GTSAC	4 cut(s)	253, 355, 1101, 1658
TseI	GCWGC	5 cut(s)	168, 390, 545, 1607, 1913
Tsp45I	GTSAC	4 cut(s)	253, 355, 1101, 1658
TspGWI	ACGGA	3 cut(s)	95, 272, 1589
Van91I	CCANNNNNTGG	1 cut(s)	1324
Vha464I	CTTAAG	1 cut(s)	1795
VneI	GTGCAC	1 cut(s)	1952
VpaK11BI	GGWCC	5 cut(s)	272, 283, 502, 682, 887
VspI	ATTAAT	1 cut(s)	1889
XbaI	TCTAGA	1 cut(s)	1831
XspI	CTAG	3 cut(s)	1280, 1508, 1832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.