AT5G14850

Mannosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
4801870 .. 4805036
3167 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14850.1

Sequence Viewer

Length: 1647 bp
ATGGATATAAGGAAGCGGAAGAACGCCGGCGGCGATGGCGACGGTGGCGCCGATGGCGCGTCAGTTAATGTCGGAGATGAACCTGATTCGTTTGGTGGTCGAATAGGATCTCCGAGGAGGATATTCTTGTTCTGCTTGGCGTTTCGTGTGGTAAATGCATTGTTGATTCAGACTTATTTCAATCCTGACGAACATTGGCAATCACTTGAAGTAGCTCACCGCACCATATTTGGGTATGGTTATATGACATGGGAGTGGAAAAGAGGAATACGAAGCTATTTGCATCCAATGTTGTTCGCATTCTTGTATAAACTTCTACAAGTTACTGGCCTTGATACTCCCTACATAATGATCAAAGCCCCACGTCTTATGCAATCCATATTTTCAGCTATTGGTGATCTCTATTTGTATAAACTCTCTGATGCTTTATATGGAGGAAATGTTGCAACTTGGTCTCTCTTTTGTCAAATGGCAAACTGGTTCATCTTCTTCTGTTTGAACCGTACCTTTTCAAACTGTTTGGAGACTGTTCTTACCATCATGGGGCTGTACTACTGGCCTTGTATTAGAGATTCTTCAATAGACTATCCCGTGAATCGGAAGTGGGGTTTGGTCATAGCGGCCCTAGCATGTGCCATAAGGCCAACTAGTGCAGTCATATGGTTATACGTTGGGATGCTCGAGCTATTTTTGACACCTAATAAGGTCAAATTCATCATTCTAGAGGTGATCCCGATTGGATCTTTGGTCCTCGGTTTCACCTGTTTGTTGGACCGTCTGATGTACGGCTCGTGGGTCATTGTGCCTCTCAATTTTCTGAAGTTTAATTTCCTTTCGTCTGGTGGAGACTATTACGGAACTCACCCATGGCACTGGTACTTCACCCAGGGATTTCTTGTCATGCTTTTCACTTTCACACCATTCTCCATTGCTGGAATTATCAAGTCTAAGAATCAGAAGCTTTCAGCTCTTATTCTATGGGTCTTAGCAATATACAGCATACTCGGCCATAAGGAATTCAGGTTTGTCCTGCCTGTGCTACCCATAGCTTTGATATTCTCTGGGTATGCATTTGCTCAAATGGAAGTATCTGGTTCATCATCATCATCATCAGTCACTAAAAAGAAGCAAGTCCCTCGACAGAACCATACCAAGTGGTCTCCCAAACTAAGACTTTCAGTCTATTTTTTGCTTGCTACCAATATTCCAATGGCACTATACATGAGTTTATTCCACCAGAGAGGAACTGAGGATGCGATGAATTACTTATCGGATGAAGCATACAAAGGCAGAGTAAAGAGCATTCTCTTTCTCATGCCGTGCCATTCTACTCCCTATTATTCCACTCTCCATCGTAACATTCCAATGCAATTTCTCGACTGCACTCCAAGTGCAGAGAAGGGAGAACTTGATGAGTCGGATCAGTTCTTAGTAAACCCTTTAGGTTTTGCATCAGAGTTAGCTAGAAACTGGTCAGAGCCGCCTAGTCATATTGTATTGTTTGCATCAGAAGAAACAAAACTCAGAGATTTCATGATCCAACATTCCTTTAAAGAGGTAAGGAGGTTTTTCCACGCGCATTTCAAGGTAGATCGAGATCTTCAATCCTCAGTGGTCGTCTATGTTGTAAACCACGCATTCCCATAA

Protein Analysis

548

Amino Acids

62.7

Weight (kDa)

8.99

Isoelectric Point (pI)

34.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_22 PF03901 41 - 451 3.9e-132 Alg9-like mannosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 47
AccII CGCG 2 cut(s) 59, 1577
AciI CCGC 5 cut(s) 16, 30, 220, 620, 1481
AclWI GGATC 5 cut(s) 115, 724, 748, 1428, 1531
AcoI YGGCCR 1 cut(s) 1006
AcsI RAATTY 2 cut(s) 710, 1016
AcuI CTGAAG 1 cut(s) 839
AcyI GRCGYC 1 cut(s) 48
AfaI GTAC 4 cut(s) 505, 551, 785, 878
AfiI CCNNNNNNNGG 3 cut(s) 231, 543, 597
AgsI TTSAA 7 cut(s) 181, 209, 499, 513, 579, 1585, 1604
AhdI GACNNNNNGTC 1 cut(s) 1178
AhlI ACTAGT 1 cut(s) 647
AjiI CACGTC 1 cut(s) 365
AjnI CCWGG 1 cut(s) 885
AjuI GAANNNNNNNTTGG 2 cut(s) 593, 625
AluBI AGCT 8 cut(s) 215, 276, 389, 685, 961, 968, 1049, 1463
AluI AGCT 8 cut(s) 215, 276, 389, 685, 961, 968, 1049, 1463
Alw26I GTCTC 4 cut(s) 459, 518, 840, 1164
AlwI GGATC 5 cut(s) 115, 724, 748, 1428, 1531
Ama87I CYCGRG 1 cut(s) 680
AoxI GGCC 5 cut(s) 328, 557, 621, 641, 1006
ApoI RAATTY 2 cut(s) 710, 1016
AspLEI GCGC 3 cut(s) 50, 59, 1579
AspS9I GGNCC 3 cut(s) 622, 748, 772
AsuHPI GGTGA 6 cut(s) 209, 407, 739, 751, 854, 874
AvaI CYCGRG 1 cut(s) 680
AvaII GGWCC 2 cut(s) 748, 772
BanI GGYRCC 1 cut(s) 47
BauI CACGAG 1 cut(s) 790
BccI CCATC 4 cut(s) 29, 47, 545, 1359
BceAI ACGGC 2 cut(s) 802, 1303
BcgI CGANNNNNNTGC 2 cut(s) 1118, 1152
BciT130I CCWGG 1 cut(s) 887
BclI TGATCA 1 cut(s) 351
BcoDI GTCTC 4 cut(s) 459, 518, 840, 1164
BcuI ACTAGT 1 cut(s) 647
BfaI CTAG 5 cut(s) 626, 648, 722, 1464, 1485
BfoI RGCGCY 1 cut(s) 51
BglII AGATCT 1 cut(s) 1597
BisI GCNGC 3 cut(s) 31, 621, 1481
BlsI GCNGC 3 cut(s) 32, 622, 1482
Bme1390I CCNGG 1 cut(s) 887
Bme18I GGWCC 2 cut(s) 748, 772
BmeRI GACNNNNNGTC 1 cut(s) 1178
BmeT110I CYCGRG 1 cut(s) 680
BmgBI CACGTC 1 cut(s) 365
BmgT120I GGNCC 3 cut(s) 622, 748, 772
BmiI GGNNCC 1 cut(s) 49
BmrFI CCNGG 1 cut(s) 887
BmsI GCATC 6 cut(s) 292, 412, 666, 1243, 1460, 1514
BsaBI GATNNNNATC 1 cut(s) 1596
BsaHI GRCGYC 1 cut(s) 48
BsaI GGTCTC 2 cut(s) 459, 1164
BsaJI CCNNGG 5 cut(s) 113, 751, 866, 885, 886
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 3 cut(s) 231, 543, 597
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 5 cut(s) 331, 482, 560, 878, 1475
Bse3DI GCAATG 1 cut(s) 927
Bse8I GATNNNNATC 1 cut(s) 1596
BseBI CCWGG 1 cut(s) 887
BseDI CCNNGG 5 cut(s) 113, 751, 866, 885, 886
BseGI GGATG 4 cut(s) 283, 681, 1258, 1279
BseJI GATNNNNATC 1 cut(s) 1596
BseLI CCNNNNNNNGG 3 cut(s) 231, 543, 597
BseMI GCAATG 1 cut(s) 927
BseMII CTCAG 3 cut(s) 1239, 1537, 1623
BseNI ACTGG 5 cut(s) 331, 482, 560, 878, 1475
BseRI GAGGAG 1 cut(s) 130
BsgI GTGCAG 3 cut(s) 672, 1366, 1413
Bsh1236I CGCG 2 cut(s) 59, 1577
BshFI GGCC 5 cut(s) 330, 559, 623, 643, 1008
BshNI GGYRCC 1 cut(s) 47
BsiHKCI CYCGRG 1 cut(s) 680
BsiSI CCGG 1 cut(s) 27
BslFI GGGAC 1 cut(s) 1118
BslI CCNNNNNNNGG 3 cut(s) 231, 543, 597
BsmAI GTCTC 4 cut(s) 459, 518, 840, 1164
BsmFI GGGAC 1 cut(s) 1118
BsmI GAATGC 3 cut(s) 299, 1302, 1637
BsnI GGCC 5 cut(s) 330, 559, 623, 643, 1008
Bso31I GGTCTC 2 cut(s) 459, 1164
BsoBI CYCGRG 1 cut(s) 680
Bsp143I GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
Bsp19I CCATGG 1 cut(s) 866
BspACI CCGC 5 cut(s) 16, 30, 220, 620, 1481
BspANI GGCC 5 cut(s) 330, 559, 623, 643, 1008
BspCNI CTCAG 3 cut(s) 1240, 1536, 1622
BspFNI CGCG 2 cut(s) 59, 1577
BspHI TCATGA 1 cut(s) 1533
BspLI GGNNCC 1 cut(s) 49
BspPI GGATC 5 cut(s) 115, 724, 748, 1428, 1531
BspT107I GGYRCC 1 cut(s) 47
BspTNI GGTCTC 2 cut(s) 459, 1164
BsrDI GCAATG 1 cut(s) 927
BsrFI RCCGGY 1 cut(s) 26
BsrI ACTGG 5 cut(s) 331, 482, 560, 878, 1475
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 5 cut(s) 113, 751, 866, 885, 886
BssMI GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
BssNI GRCGYC 1 cut(s) 48
BssSI CACGAG 1 cut(s) 790
BssT1I CCWWGG 1 cut(s) 866
Bst2BI CACGAG 1 cut(s) 790
Bst2UI CCWGG 1 cut(s) 887
Bst4CI ACNGT 5 cut(s) 44, 503, 518, 529, 776
BstACI GRCGYC 1 cut(s) 48
BstC8I GCNNGC 2 cut(s) 28, 1194
BstDEI CTNAG 7 cut(s) 948, 985, 1169, 1248, 1429, 1523, 1609
BstDSI CCRYGG 1 cut(s) 866
BstF5I GGATG 4 cut(s) 283, 681, 1258, 1279
BstFNI CGCG 2 cut(s) 59, 1577
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 3 cut(s) 50, 59, 1579
BstKTI GATC 9 cut(s) 110, 354, 400, 732, 743, 1423, 1539, 1594, 1600
BstMAI GTCTC 4 cut(s) 459, 518, 840, 1164
BstMBI GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
BstMWI GCNNNNNNNGC 6 cut(s) 36, 45, 54, 56, 626, 1005
BstNI CCWGG 1 cut(s) 887
BstNSI RCATGY 1 cut(s) 633
BstSCI CCNGG 1 cut(s) 885
BstUI CGCG 2 cut(s) 59, 1577
BstX2I RGATCY 3 cut(s) 107, 740, 1597
BstXI CCANNNNNNTGG 1 cut(s) 873
BstYI RGATCY 3 cut(s) 107, 740, 1597
BsuRI GGCC 5 cut(s) 330, 559, 623, 643, 1008
BtgI CCRYGG 1 cut(s) 866
BtgZI GCGATG 2 cut(s) 48, 1271
BtrI CACGTC 1 cut(s) 365
BtsCI GGATG 4 cut(s) 283, 681, 1258, 1279
BtsIMutI CAGTG 2 cut(s) 871, 1617
Cac8I GCNNGC 2 cut(s) 28, 1194
CciI TCATGA 1 cut(s) 1533
CfoI GCGC 3 cut(s) 50, 59, 1579
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 3 cut(s) 622, 748, 772
CseI GACGC 1 cut(s) 48
Csp6I GTAC 4 cut(s) 504, 550, 784, 877
CviAII CATG 8 cut(s) 249, 541, 630, 867, 901, 1222, 1315, 1534
CviQI GTAC 4 cut(s) 504, 550, 784, 877
DdeI CTNAG 7 cut(s) 948, 985, 1169, 1248, 1429, 1523, 1609
DinI GGCGCC 1 cut(s) 49
DpnI GATC 9 cut(s) 109, 353, 399, 731, 742, 1422, 1538, 1593, 1599
DpnII GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
DraI TTTAAA 1 cut(s) 1552
DriI GACNNNNNGTC 1 cut(s) 1178
EaeI YGGCCR 1 cut(s) 1006
Eam1105I GACNNNNNGTC 1 cut(s) 1178
Eco130I CCWWGG 1 cut(s) 866
Eco31I GGTCTC 2 cut(s) 459, 1164
Eco47I GGWCC 2 cut(s) 748, 772
Eco57I CTGAAG 1 cut(s) 839
Eco88I CYCGRG 1 cut(s) 680
EcoRI GAATTC 1 cut(s) 1016
EcoRII CCWGG 1 cut(s) 885
EcoT14I CCWWGG 1 cut(s) 866
EcoT22I ATGCAT 2 cut(s) 160, 1072
EgeI GGCGCC 1 cut(s) 49
EheI GGCGCC 1 cut(s) 49
ErhI CCWWGG 1 cut(s) 866
FaeI CATG 8 cut(s) 252, 544, 633, 870, 904, 1225, 1318, 1537
FaqI GGGAC 1 cut(s) 1118
FatI CATG 8 cut(s) 248, 540, 629, 866, 900, 1221, 1314, 1533
FauNDI CATATG 1 cut(s) 659
FbaI TGATCA 1 cut(s) 351
Fnu4HI GCNGC 3 cut(s) 31, 621, 1481
FokI GGATG 4 cut(s) 270, 688, 1265, 1286
Fsp4HI GCNGC 3 cut(s) 31, 621, 1481
FspBI CTAG 5 cut(s) 626, 648, 722, 1464, 1485
GlaI GCGC 3 cut(s) 49, 58, 1578
GluI GCNGC 3 cut(s) 31, 621, 1481
HaeII RGCGCY 1 cut(s) 51
HaeIII GGCC 5 cut(s) 330, 559, 623, 643, 1008
HapII CCGG 1 cut(s) 27
HgaI GACGC 1 cut(s) 48
HhaI GCGC 3 cut(s) 50, 59, 1579
Hin1I GRCGYC 1 cut(s) 48
Hin1II CATG 8 cut(s) 252, 544, 633, 870, 904, 1225, 1318, 1537
Hin6I GCGC 3 cut(s) 48, 57, 1577
HinP1I GCGC 3 cut(s) 48, 57, 1577
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 6 cut(s) 86, 166, 572, 595, 952, 1415
HpaII CCGG 1 cut(s) 27
HphI GGTGA 6 cut(s) 209, 407, 739, 751, 854, 874
Hpy166II GTNNAC 2 cut(s) 1435, 1630
Hpy188III TCNNGA 6 cut(s) 185, 722, 733, 1376, 1534, 1595
Hpy8I GTNNAC 2 cut(s) 1435, 1630
Hpy99I CGWCG 1 cut(s) 44
HpyAV CCTTC 1 cut(s) 1393
HpyCH4III ACNGT 5 cut(s) 44, 503, 518, 529, 776
HpyCH4IV ACGT 2 cut(s) 364, 669
HpyF10VI GCNNNNNNNGC 6 cut(s) 36, 45, 54, 56, 626, 1005
HpyF3I CTNAG 7 cut(s) 948, 985, 1169, 1248, 1429, 1523, 1609
HpySE526I ACGT 2 cut(s) 364, 669
Hsp92I GRCGYC 1 cut(s) 48
Hsp92II CATG 8 cut(s) 252, 544, 633, 870, 904, 1225, 1318, 1537
HspAI GCGC 3 cut(s) 48, 57, 1577
KasI GGCGCC 1 cut(s) 47
KroI GCCGGC 1 cut(s) 26
KroNI GCCGGC 1 cut(s) 28
Ksp22I TGATCA 1 cut(s) 351
Kzo9I GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
LweI GCATC 6 cut(s) 292, 412, 666, 1243, 1460, 1514
MaeI CTAG 5 cut(s) 626, 648, 722, 1464, 1485
MaeII ACGT 2 cut(s) 364, 669
MaeIII GTNAC 3 cut(s) 322, 1114, 1355
MalI GATC 9 cut(s) 109, 353, 399, 731, 742, 1422, 1538, 1593, 1599
MboI GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
MboII GAAGA 6 cut(s) 31, 478, 481, 567, 1523, 1592
MflI RGATCY 3 cut(s) 107, 740, 1597
MluCI AATT 7 cut(s) 710, 811, 826, 936, 1016, 1261, 1370
Mly113I GGCGCC 1 cut(s) 48
MlyI GAGTC 1 cut(s) 1424
MmeI TCCRAC 4 cut(s) 52, 750, 1398, 1564
Mph1103I ATGCAT 2 cut(s) 160, 1072
MreI CGCCGGCG 1 cut(s) 26
MroNI GCCGGC 1 cut(s) 26
MseI TTAA 3 cut(s) 66, 825, 1551
MslI CAYNNNNRTG 2 cut(s) 253, 1364
MspI CCGG 1 cut(s) 27
MspR9I CCNGG 1 cut(s) 887
Mva1269I GAATGC 3 cut(s) 299, 1302, 1637
MvaI CCWGG 1 cut(s) 887
MvnI CGCG 2 cut(s) 59, 1577
MwoI GCNNNNNNNGC 6 cut(s) 36, 45, 54, 56, 626, 1005
NaeI GCCGGC 1 cut(s) 28
NarI GGCGCC 1 cut(s) 48
NcoI CCATGG 1 cut(s) 866
NdeI CATATG 1 cut(s) 659
NdeII GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
NgoMIV GCCGGC 1 cut(s) 26
NlaIII CATG 8 cut(s) 252, 544, 633, 870, 904, 1225, 1318, 1537
NlaIV GGNNCC 1 cut(s) 49
NmeAIII GCCGAG 1 cut(s) 984
NmuCI GTSAC 1 cut(s) 1114
NsiI ATGCAT 2 cut(s) 160, 1072
NspI RCATGY 1 cut(s) 633
PaeR7I CTCGAG 1 cut(s) 680
PagI TCATGA 1 cut(s) 1533
PasI CCCWGGG 1 cut(s) 886
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 48
PctI GAATGC 3 cut(s) 299, 1302, 1637
PdiI GCCGGC 1 cut(s) 28
PfeI GAWTC 5 cut(s) 86, 166, 572, 595, 952
PkrI GCNGC 3 cut(s) 32, 622, 1482
PleI GAGTC 1 cut(s) 1423
PluTI GGCGCC 1 cut(s) 51
PpsI GAGTC 1 cut(s) 1423
Psp6I CCWGG 1 cut(s) 885
PspGI CCWGG 1 cut(s) 885
PspN4I GGNNCC 1 cut(s) 49
PspPI GGNCC 3 cut(s) 622, 748, 772
PspXI VCTCGAGB 1 cut(s) 680
PsuI RGATCY 3 cut(s) 107, 740, 1597
RsaI GTAC 4 cut(s) 505, 551, 785, 878
RsaNI GTAC 4 cut(s) 504, 550, 784, 877
RseI CAYNNNNRTG 2 cut(s) 253, 1364
SaqAI TTAA 3 cut(s) 66, 825, 1551
SatI GCNGC 3 cut(s) 31, 621, 1481
Sau3AI GATC 9 cut(s) 107, 351, 397, 729, 740, 1420, 1536, 1591, 1597
Sau96I GGNCC 3 cut(s) 622, 748, 772
SchI GAGTC 1 cut(s) 1424
ScrFI CCNGG 1 cut(s) 887
SfaNI GCATC 6 cut(s) 292, 412, 666, 1243, 1460, 1514
SfoI GGCGCC 1 cut(s) 49
Sfr274I CTCGAG 1 cut(s) 680
SgrAI CRCCGGYG 1 cut(s) 26
SinI GGWCC 2 cut(s) 748, 772
SlaI CTCGAG 1 cut(s) 680
SmiMI CAYNNNNRTG 2 cut(s) 253, 1364
SmlI CTYRAG 1 cut(s) 680
SmoI CTYRAG 1 cut(s) 680
SpeI ACTAGT 1 cut(s) 647
Sse9I AATT 7 cut(s) 710, 811, 826, 936, 1016, 1261, 1370
SsiI CCGC 5 cut(s) 16, 30, 220, 620, 1481
SspDI GGCGCC 1 cut(s) 47
SspI AATATT 1 cut(s) 1204
SspMI CTAG 5 cut(s) 626, 648, 722, 1464, 1485
StyD4I CCNGG 1 cut(s) 885
StyI CCWWGG 1 cut(s) 866
TaaI ACNGT 5 cut(s) 44, 503, 518, 529, 776
TaiI ACGT 2 cut(s) 367, 672
TaqI TCGA 5 cut(s) 100, 681, 1138, 1377, 1594
TasI AATT 7 cut(s) 710, 811, 826, 936, 1016, 1261, 1370
TatI WGTACW 1 cut(s) 549
TauI GCSGC 3 cut(s) 33, 623, 1483
TfiI GAWTC 5 cut(s) 86, 166, 572, 595, 952
Tru1I TTAA 3 cut(s) 66, 825, 1551
Tru9I TTAA 3 cut(s) 66, 825, 1551
TscAI CASTG 2 cut(s) 878, 1617
TseFI GTSAC 1 cut(s) 1114
Tsp45I GTSAC 1 cut(s) 1114
TspDTI ATGAA 7 cut(s) 93, 472, 703, 1086, 1274, 1290, 1522
TspGWI ACGGA 1 cut(s) 870
TspRI CASTG 2 cut(s) 878, 1617
VpaK11BI GGWCC 2 cut(s) 748, 772
XapI RAATTY 2 cut(s) 710, 1016
XbaI TCTAGA 1 cut(s) 721
XceI RCATGY 1 cut(s) 633
XcmI CCANNNNNNNNNTGG 1 cut(s) 1207
XhoI CTCGAG 1 cut(s) 680
XspI CTAG 5 cut(s) 626, 648, 722, 1464, 1485
Zsp2I ATGCAT 2 cut(s) 160, 1072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.