pycom16g23140

GPI mannosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
23737885 .. 23741382
3498 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g23140.8

Sequence Viewer

Length: 1638 bp
ATGAGGCAAAGGCAGAGTGCTGCTGTCTCACCAGCAGCAGAATCAGTCAAAACCGAAAACCCAGTTCCTACGAAATTAGGTCCACAGCAAAAGGAATCCCCGCCAGGTGATTTTCTAGGATCCTCCAGGAAGGTCTTTGCACTCTGTTTGGCCTTTCGAATGGTAAATGCTCTGTTGATTCAGACCTATTTTAACCCTGATGAACACTGGCAAGCCCTTGAAGTTGCACATCGCATCACTTTTGGGTATGGCCATTTGACGTGGGAGTGGAAGAAGGGGATTCGTAGCTATTTGCATCCTTTTCTCTTTGCCTTCCTTTACAAAGCTCTTGCAGTGTTGGGTCTTGATACCCCATGGCTCATGGTCAAGGCTCCGCGGCTATTTCAGTCTTTTTTAGCTGCCTTTGGTGATCTATACTTGTATAAACTCTCTGTCATCCTCTTTGGTGACTGCGTTGCTAAATGGGCTCTGTTCTCACAATTGACAAATTGGTTTATGTTTTACTGCATCACTCGTACATTATCAAATAGTTTGGAGACTGTTCTTACCCTTGTGAGCCTGTACTACTGGCCCTGTATGAGGGCTTCTTCCAGCAAACTTCCTTTGGAATCAAGGAAGTGGGGTTTGATTATTGCCGCATTAGCTTGTGCTATCAGACCAACAAGTGCTATCATATGGCTGTATGTTGGGCTTCTTGAGCTATTTTTGACATGTGATAAACTGAGATTCATTTTTCTGGAAGTGGCTCCTATGGGGGTCCTGGTGCTTGGTTTTACATTTTTTTTGGATCGTTTGATGTACGGCTCATGGGTCTTTGTACCTCTTAATTTTATAAGATTCAATTTTCTTTCTGCTGGTGGAGACTATTATGGGACTCACAAGTGGCACTGGTACTTCACTCAGGGATTTACAGTCATGATATTCACTTTCTTACCATTTTCTGTTGCTGGAATCATACAATCCAAAAATTGGAAACTTTCTGGCCTTATTGCATGGGTTTTAGGACTTTATAGTGTGCTAGGGCACAAAGAATTCAGGTTTGTTCTGCCTGTACTTCCTATAGCTTTGATATTCTCTGGACATTCCTTAGCTGCATTAAGAACATCAGTTTCTGCATATGGTAAAGGAAAAGAATCATTAAAGATTCATAGCAAATTCCCTGCAAAAATGCATTTGGCCATCTTTTTCTTGCTCGCTACCAATATTCCAGTGGCCCTGTATATGAGTTTGGTTCATCAGAGAGGAACTGAGGATGTTACTTACTATCTATCCAAAGAAGTACTTCACGGAAAAGTGAGAAATATACTTTTTCTGATGCCTTGCCACGCTACACCTTACTACTCTACGGTGCACCGTGACCTTCCGATGAGATTCCTAGACTGCTCACCAAGTGAAGAAAAAGGAATCCCAGATGAATCAGACCAATTCATGATGGATCCTGTTAGTTTTACATCAGAGCTTGCAAAGAATTGGTCTTTACCTAGTCACATTGTAGTATTTGATTCGGAAGAAAAACAGTTGAGGGATTTTCTGATTTCACATTCTTTCAGAAAGATAAAAAGGTTTTTCCATGCGCACTTCAAAGTGGACCGTGATCTGCAAGCGTCAGTTGTTGTGTACAGTTTGACAGGCGACTGA

Protein Analysis

546

Amino Acids

62.39

Weight (kDa)

9.3

Isoelectric Point (pI)

37.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 833
Acc16I TGCGCA 1 cut(s) 1575
AccB7I CCANNNNNTGG 1 cut(s) 969
AccII CGCG 1 cut(s) 376
AciI CCGC 4 cut(s) 101, 374, 376, 636
AclWI GGATC 5 cut(s) 114, 127, 795, 1430, 1443
AcoI YGGCCR 2 cut(s) 250, 1176
AcsI RAATTY 2 cut(s) 1031, 1154
AdeI CACNNNGTG 1 cut(s) 1391
AfaI GTAC 8 cut(s) 517, 563, 800, 819, 893, 1053, 1281, 1619
AfiI CCNNNNNNNGG 2 cut(s) 579, 969
AflIII ACRYGT 1 cut(s) 710
AgsI TTSAA 3 cut(s) 221, 841, 1582
AjiI CACGTC 1 cut(s) 261
AjnI CCWGG 3 cut(s) 103, 125, 759
AluBI AGCT 8 cut(s) 288, 326, 398, 644, 700, 1064, 1091, 1459
AluI AGCT 8 cut(s) 288, 326, 398, 644, 700, 1064, 1091, 1459
Alw21I GWGCWC 1 cut(s) 1353
Alw26I GTCTC 3 cut(s) 31, 530, 855
Alw44I GTGCAC 1 cut(s) 1349
AlwI GGATC 5 cut(s) 114, 127, 795, 1430, 1443
AlwNI CAGNNNCTG 1 cut(s) 1112
AoxI GGCC 6 cut(s) 150, 250, 569, 982, 1176, 1212
ApaLI GTGCAC 1 cut(s) 1349
ApeKI GCWGC 4 cut(s) 20, 35, 398, 1091
ApoI RAATTY 2 cut(s) 1031, 1154
ArsI GACNNNNNNTTYG 2 cut(s) 1457, 1489
Asp700I GAANNNNTTC 1 cut(s) 1281
AspLEI GCGC 1 cut(s) 1576
AspS9I GGNCC 5 cut(s) 80, 570, 757, 1213, 1588
AsuHPI GGTGA 5 cut(s) 21, 119, 419, 458, 1377
AsuII TTCGAA 1 cut(s) 157
AvaII GGWCC 3 cut(s) 80, 757, 1588
BaeGI GKGCMC 2 cut(s) 1026, 1353
BalI TGGCCA 2 cut(s) 252, 1178
BamHI GGATCC 2 cut(s) 119, 1435
BanII GRGCYC 1 cut(s) 469
BarI GAAGNNNNNNTAC 2 cut(s) 568, 600
Bbv12I GWGCWC 1 cut(s) 1353
BbvI GCAGC 4 cut(s) 7, 47, 385, 1078
BccI CCATC 2 cut(s) 1187, 1426
BceAI ACGGC 1 cut(s) 817
BciT130I CCWGG 3 cut(s) 105, 127, 761
BcoDI GTCTC 3 cut(s) 31, 530, 855
BfaI CTAG 4 cut(s) 116, 1019, 1376, 1482
BfmI CTRYAG 1 cut(s) 1059
BisI GCNGC 6 cut(s) 21, 36, 377, 399, 636, 1092
BlsI GCNGC 6 cut(s) 22, 37, 378, 400, 637, 1093
BmcAI AGTACT 1 cut(s) 1281
Bme1390I CCNGG 3 cut(s) 105, 127, 761
Bme18I GGWCC 3 cut(s) 80, 757, 1588
BmgBI CACGTC 1 cut(s) 261
BmgT120I GGNCC 5 cut(s) 80, 570, 757, 1213, 1588
BmiI GGNNCC 5 cut(s) 121, 372, 747, 758, 1437
BmrFI CCNGG 3 cut(s) 105, 127, 761
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 4 cut(s) 243, 304, 516, 1305
BmuI ACTGGG 1 cut(s) 56
BpmI CTGGAG 1 cut(s) 109
Bpu10I CCTNAGC 1 cut(s) 1087
Bpu14I TTCGAA 1 cut(s) 157
BpuEI CTTGAG 1 cut(s) 716
BsaJI CCNNGG 2 cut(s) 353, 374
Bsc4I CCNNNNNNNGG 2 cut(s) 579, 969
Bse1I ACTGG 5 cut(s) 62, 212, 572, 893, 1208
BseBI CCWGG 3 cut(s) 105, 127, 761
BseDI CCNNGG 2 cut(s) 353, 374
BseGI GGATG 3 cut(s) 295, 435, 1258
BseLI CCNNNNNNNGG 2 cut(s) 579, 969
BseMII CTCAG 3 cut(s) 713, 914, 1239
BseNI ACTGG 5 cut(s) 62, 212, 572, 893, 1208
BseSI GKGCMC 2 cut(s) 1026, 1353
BseXI GCAGC 4 cut(s) 7, 47, 385, 1078
Bsh1236I CGCG 1 cut(s) 376
BshFI GGCC 6 cut(s) 152, 252, 571, 984, 1178, 1214
BsiHKAI GWGCWC 1 cut(s) 1353
BslFI GGGAC 1 cut(s) 886
BslI CCNNNNNNNGG 2 cut(s) 579, 969
BsmAI GTCTC 3 cut(s) 31, 530, 855
BsmFI GGGAC 1 cut(s) 886
BsnI GGCC 6 cut(s) 152, 252, 571, 984, 1178, 1214
Bsp119I TTCGAA 1 cut(s) 157
Bsp1286I GDGCHC 3 cut(s) 469, 1026, 1353
Bsp1407I TGTACA 1 cut(s) 1617
Bsp143I GATC 5 cut(s) 119, 409, 787, 1435, 1594
Bsp19I CCATGG 1 cut(s) 353
BspACI CCGC 4 cut(s) 101, 374, 376, 636
BspANI GGCC 6 cut(s) 152, 252, 571, 984, 1178, 1214
BspCNI CTCAG 3 cut(s) 714, 913, 1240
BspFNI CGCG 1 cut(s) 376
BspHI TCATGA 2 cut(s) 915, 1428
BspLI GGNNCC 5 cut(s) 121, 372, 747, 758, 1437
BspPI GGATC 5 cut(s) 114, 127, 795, 1430, 1443
BspT104I TTCGAA 1 cut(s) 157
BsrGI TGTACA 1 cut(s) 1617
BsrI ACTGG 5 cut(s) 62, 212, 572, 893, 1208
BssECI CCNNGG 2 cut(s) 353, 374
BssMI GATC 5 cut(s) 119, 409, 787, 1435, 1594
BssT1I CCWWGG 1 cut(s) 353
Bst2UI CCWGG 3 cut(s) 105, 127, 761
Bst4CI ACNGT 7 cut(s) 541, 913, 1348, 1355, 1518, 1592, 1622
BstAUI TGTACA 1 cut(s) 1617
BstBI TTCGAA 1 cut(s) 157
BstC8I GCNNGC 4 cut(s) 213, 1194, 1461, 1602
BstDEI CTNAG 4 cut(s) 722, 900, 1087, 1248
BstDSI CCRYGG 2 cut(s) 353, 374
BstENI CCTNNNNNAGG 1 cut(s) 577
BstF5I GGATG 3 cut(s) 295, 435, 1258
BstFNI CGCG 1 cut(s) 376
BstHHI GCGC 1 cut(s) 1576
BstKTI GATC 5 cut(s) 122, 412, 790, 1438, 1597
BstMAI GTCTC 3 cut(s) 31, 530, 855
BstMBI GATC 5 cut(s) 119, 409, 787, 1435, 1594
BstMWI GCNNNNNNNGC 3 cut(s) 464, 641, 697
BstNI CCWGG 3 cut(s) 105, 127, 761
BstNSI RCATGY 1 cut(s) 714
BstSCI CCNGG 3 cut(s) 103, 125, 759
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 2 cut(s) 1026, 1353
BstUI CGCG 1 cut(s) 376
BstV1I GCAGC 4 cut(s) 7, 47, 385, 1078
BstX2I RGATCY 2 cut(s) 119, 1435
BstYI RGATCY 2 cut(s) 119, 1435
BsuRI GGCC 6 cut(s) 152, 252, 571, 984, 1178, 1214
BtgI CCRYGG 2 cut(s) 353, 374
BtgZI GCGATG 1 cut(s) 215
BtrI CACGTC 1 cut(s) 261
BtsCI GGATG 3 cut(s) 295, 435, 1258
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 4 cut(s) 205, 339, 886, 1215
Cac8I GCNNGC 4 cut(s) 213, 1194, 1461, 1602
CaiI CAGNNNCTG 1 cut(s) 1112
CciI TCATGA 2 cut(s) 915, 1428
CfoI GCGC 1 cut(s) 1576
Cfr13I GGNCC 5 cut(s) 80, 570, 757, 1213, 1588
Cfr42I CCGCGG 1 cut(s) 377
CseI GACGC 1 cut(s) 1593
Csp6I GTAC 8 cut(s) 516, 562, 799, 818, 892, 1052, 1280, 1618
CviAII CATG 8 cut(s) 354, 361, 711, 807, 916, 993, 1429, 1571
CviQI GTAC 8 cut(s) 516, 562, 799, 818, 892, 1052, 1280, 1618
DdeI CTNAG 4 cut(s) 722, 900, 1087, 1248
DpnI GATC 5 cut(s) 121, 411, 789, 1437, 1596
DpnII GATC 5 cut(s) 119, 409, 787, 1435, 1594
DraIII CACNNNGTG 1 cut(s) 1391
EaeI YGGCCR 2 cut(s) 250, 1176
Eco130I CCWWGG 1 cut(s) 353
Eco24I GRGCYC 1 cut(s) 469
Eco47I GGWCC 3 cut(s) 80, 757, 1588
EcoNI CCTNNNNNAGG 1 cut(s) 577
EcoO109I RGGNCCY 1 cut(s) 757
EcoRI GAATTC 1 cut(s) 1031
EcoRII CCWGG 3 cut(s) 103, 125, 759
EcoT14I CCWWGG 1 cut(s) 353
EcoT22I ATGCAT 1 cut(s) 1173
EcoT38I GRGCYC 1 cut(s) 469
ErhI CCWWGG 1 cut(s) 353
FaeI CATG 8 cut(s) 357, 364, 714, 810, 919, 996, 1432, 1574
FalI AAGNNNNNCTT 2 cut(s) 1266, 1298
FaqI GGGAC 1 cut(s) 886
FatI CATG 8 cut(s) 353, 360, 710, 806, 915, 992, 1428, 1570
FauI CCCGC 1 cut(s) 108
FauNDI CATATG 2 cut(s) 674, 1117
Fnu4HI GCNGC 6 cut(s) 21, 36, 377, 399, 636, 1092
FokI GGATG 3 cut(s) 282, 422, 1265
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 6 cut(s) 21, 36, 377, 399, 636, 1092
FspAI RTGCGCAY 1 cut(s) 1575
FspBI CTAG 4 cut(s) 116, 1019, 1376, 1482
FspI TGCGCA 1 cut(s) 1575
GlaI GCGC 1 cut(s) 1575
GluI GCNGC 6 cut(s) 21, 36, 377, 399, 636, 1092
GsuI CTGGAG 1 cut(s) 109
HaeIII GGCC 6 cut(s) 152, 252, 571, 984, 1178, 1214
HgaI GACGC 1 cut(s) 1593
HhaI GCGC 1 cut(s) 1576
Hin1II CATG 8 cut(s) 357, 364, 714, 810, 919, 996, 1432, 1574
Hin6I GCGC 1 cut(s) 1574
HinP1I GCGC 1 cut(s) 1574
HphI GGTGA 5 cut(s) 21, 119, 419, 458, 1377
Hpy166II GTNNAC 4 cut(s) 83, 1351, 1588, 1618
Hpy188III TCNNGA 6 cut(s) 344, 695, 737, 916, 1077, 1429
Hpy8I GTNNAC 4 cut(s) 83, 1351, 1588, 1618
HpyAV CCTTC 4 cut(s) 124, 268, 322, 1370
HpyCH4III ACNGT 7 cut(s) 541, 913, 1348, 1355, 1518, 1592, 1622
HpyCH4IV ACGT 1 cut(s) 260
HpyF10VI GCNNNNNNNGC 3 cut(s) 464, 641, 697
HpyF3I CTNAG 4 cut(s) 722, 900, 1087, 1248
HpySE526I ACGT 1 cut(s) 260
Hsp92II CATG 8 cut(s) 357, 364, 714, 810, 919, 996, 1432, 1574
HspAI GCGC 1 cut(s) 1574
KspI CCGCGG 1 cut(s) 377
Kzo9I GATC 5 cut(s) 119, 409, 787, 1435, 1594
LmnI GCTCC 2 cut(s) 376, 751
Lsp1109I GCAGC 4 cut(s) 7, 47, 385, 1078
LweI GCATC 4 cut(s) 243, 304, 516, 1305
MaeI CTAG 4 cut(s) 116, 1019, 1376, 1482
MaeII ACGT 1 cut(s) 260
MaeIII GTNAC 4 cut(s) 446, 1255, 1355, 1484
MalI GATC 5 cut(s) 121, 411, 789, 1437, 1596
MboI GATC 5 cut(s) 119, 409, 787, 1435, 1594
MboII GAAGA 4 cut(s) 283, 579, 1406, 1520
MfeI CAATTG 1 cut(s) 479
MflI RGATCY 2 cut(s) 119, 1435
MhlI GDGCHC 3 cut(s) 469, 1026, 1353
MlsI TGGCCA 2 cut(s) 252, 1178
MluNI TGGCCA 2 cut(s) 252, 1178
MlyI GAGTC 1 cut(s) 868
MnlI CCTC 7 cut(s) 133, 449, 573, 831, 1235, 1243, 1515
Mox20I TGGCCA 2 cut(s) 252, 1178
Mph1103I ATGCAT 1 cut(s) 1173
MroXI GAANNNNTTC 1 cut(s) 1281
MscI TGGCCA 2 cut(s) 252, 1178
MseI TTAA 4 cut(s) 192, 825, 1097, 1139
Msp20I TGGCCA 2 cut(s) 252, 1178
MspA1I CMGCKG 1 cut(s) 376
MspR9I CCNGG 3 cut(s) 105, 127, 761
MunI CAATTG 1 cut(s) 479
MvaI CCWGG 3 cut(s) 105, 127, 761
MvnI CGCG 1 cut(s) 376
MwoI GCNNNNNNNGC 3 cut(s) 464, 641, 697
NcoI CCATGG 1 cut(s) 353
NdeI CATATG 2 cut(s) 674, 1117
NdeII GATC 5 cut(s) 119, 409, 787, 1435, 1594
NlaIII CATG 8 cut(s) 357, 364, 714, 810, 919, 996, 1432, 1574
NlaIV GGNNCC 5 cut(s) 121, 372, 747, 758, 1437
NmuCI GTSAC 3 cut(s) 446, 1355, 1484
NsbI TGCGCA 1 cut(s) 1575
NsiI ATGCAT 1 cut(s) 1173
NspI RCATGY 1 cut(s) 714
NspV TTCGAA 1 cut(s) 157
PagI TCATGA 2 cut(s) 915, 1428
PciI ACATGT 1 cut(s) 710
PdmI GAANNNNTTC 1 cut(s) 1281
PflMI CCANNNNNTGG 1 cut(s) 969
PfoI TCCNGGA 1 cut(s) 125
PkrI GCNGC 6 cut(s) 22, 37, 378, 400, 637, 1093
PleI GAGTC 1 cut(s) 868
PpsI GAGTC 1 cut(s) 868
PpuMI RGGWCCY 1 cut(s) 757
PscI ACATGT 1 cut(s) 710
PsiI TTATAA 1 cut(s) 833
Psp5II RGGWCCY 1 cut(s) 757
Psp6I CCWGG 3 cut(s) 103, 125, 759
PspGI CCWGG 3 cut(s) 103, 125, 759
PspN4I GGNNCC 5 cut(s) 121, 372, 747, 758, 1437
PspPI GGNCC 5 cut(s) 80, 570, 757, 1213, 1588
PspPPI RGGWCCY 1 cut(s) 757
PstNI CAGNNNCTG 1 cut(s) 1112
PsuI RGATCY 2 cut(s) 119, 1435
RsaI GTAC 8 cut(s) 517, 563, 800, 819, 893, 1053, 1281, 1619
RsaNI GTAC 8 cut(s) 516, 562, 799, 818, 892, 1052, 1280, 1618
SacII CCGCGG 1 cut(s) 377
SaqAI TTAA 4 cut(s) 192, 825, 1097, 1139
SatI GCNGC 6 cut(s) 21, 36, 377, 399, 636, 1092
Sau3AI GATC 5 cut(s) 119, 409, 787, 1435, 1594
Sau96I GGNCC 5 cut(s) 80, 570, 757, 1213, 1588
ScaI AGTACT 1 cut(s) 1281
SchI GAGTC 1 cut(s) 868
ScrFI CCNGG 3 cut(s) 105, 127, 761
SduI GDGCHC 3 cut(s) 469, 1026, 1353
SfaNI GCATC 4 cut(s) 243, 304, 516, 1305
SfcI CTRYAG 1 cut(s) 1059
Sfr303I CCGCGG 1 cut(s) 377
SfuI TTCGAA 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 377
SinI GGWCC 3 cut(s) 80, 757, 1588
SmlI CTYRAG 1 cut(s) 695
SmoI CTYRAG 1 cut(s) 695
SsiI CCGC 4 cut(s) 101, 374, 376, 636
SspI AATATT 1 cut(s) 1204
SspMI CTAG 4 cut(s) 116, 1019, 1376, 1482
StyD4I CCNGG 3 cut(s) 103, 125, 759
StyI CCWWGG 1 cut(s) 353
TaaI ACNGT 7 cut(s) 541, 913, 1348, 1355, 1518, 1592, 1622
TaiI ACGT 1 cut(s) 263
TaqI TCGA 1 cut(s) 157
TatI WGTACW 4 cut(s) 561, 1051, 1279, 1617
TauI GCSGC 2 cut(s) 379, 638
Tru1I TTAA 4 cut(s) 192, 825, 1097, 1139
Tru9I TTAA 4 cut(s) 192, 825, 1097, 1139
TscAI CASTG 4 cut(s) 212, 339, 893, 1215
TseFI GTSAC 3 cut(s) 446, 1355, 1484
TseI GCWGC 4 cut(s) 20, 35, 398, 1091
Tsp45I GTSAC 3 cut(s) 446, 1355, 1484
TspDTI ATGAA 6 cut(s) 216, 718, 1136, 1223, 1417, 1428
TspGWI ACGGA 1 cut(s) 1302
TspRI CASTG 4 cut(s) 212, 339, 893, 1215
Van91I CCANNNNNTGG 1 cut(s) 969
VneI GTGCAC 1 cut(s) 1349
VpaK11BI GGWCC 3 cut(s) 80, 757, 1588
XagI CCTNNNNNAGG 1 cut(s) 577
XapI RAATTY 2 cut(s) 1031, 1154
XceI RCATGY 1 cut(s) 714
XcmI CCANNNNNNNNNTGG 1 cut(s) 1207
XmnI GAANNNNTTC 1 cut(s) 1281
XspI CTAG 4 cut(s) 116, 1019, 1376, 1482
ZrmI AGTACT 1 cut(s) 1281
Zsp2I ATGCAT 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.