Structural maintenance of chromosomes
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15920 |
| fragaria_vesca | FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 |
| malus_domestica | MD07G1021900.v1.1 |
| prunus_persica | Prupe.2G022000_v2.0.a1 Prupe.2G022000_v2.0.a1 |
| pyrus_communis | pycom07g01660 |
| rosa_chinensis | RchiOBHm_Chr1g0317911 |
| rosa_laevigata | RLG00000029591 RLG00000030577 |
| rosa_multiflora | Rmu_co8249473.1_g000001 Rmu_sc0000654.1_g000055 Rmu_sc0002922.1_g000001 Rmu_ssc0000008.1_g000048 |
| rosa_roxburghii | Rroxscaffold_4G00330130 |
| rosa_rugosa | Rorug01G0018500 Rorug01G0018600 |
| rosa_samantha | Rh1AG030100 Rh1BG026200 Rh1CG028700 Rh1DG041400 |
| rosa_wichuraiana | Rw1G002270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1089 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2698 |
| AccI | GTMKAC | 1 cut(s) | 1089 |
| AccII | CGCG | 3 cut(s) | 552, 554, 3080 |
| AccIII | TCCGGA | 1 cut(s) | 1465 |
| AciI | CCGC | 6 cut(s) | 1061, 1539, 2149, 2356, 2459, 3080 |
| AclI | AACGTT | 2 cut(s) | 1386, 2642 |
| AcsI | RAATTY | 5 cut(s) | 413, 817, 1492, 1648, 2774 |
| AcuI | CTGAAG | 4 cut(s) | 599, 1728, 2088, 2780 |
| AcvI | CACGTG | 1 cut(s) | 965 |
| AfaI | GTAC | 3 cut(s) | 758, 980, 1676 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1701, 2035, 2698 |
| AflIII | ACRYGT | 2 cut(s) | 341, 964 |
| AgeI | ACCGGT | 1 cut(s) | 1761 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2476, 2883 |
| AhlI | ACTAGT | 1 cut(s) | 233 |
| AjiI | CACGTC | 2 cut(s) | 661, 1826 |
| AjnI | CCWGG | 4 cut(s) | 58, 121, 302, 498 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 504, 536 |
| AleI | CACNNNNGTG | 1 cut(s) | 2989 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1056, 1088 |
| Alw21I | GWGCWC | 1 cut(s) | 1127 |
| Alw26I | GTCTC | 9 cut(s) | 500, 608, 863, 1203, 2484, 2641, 2845, 2866, 3128 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 448, 2387 |
| Ama87I | CYCGRG | 1 cut(s) | 938 |
| Aor13HI | TCCGGA | 1 cut(s) | 1465 |
| ApeKI | GCWGC | 8 cut(s) | 583, 809, 1058, 1141, 1964, 2350, 2353, 2966 |
| ApoI | RAATTY | 5 cut(s) | 413, 817, 1492, 1648, 2774 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2726, 2758 |
| AseI | ATTAAT | 1 cut(s) | 2910 |
| AsiGI | ACCGGT | 1 cut(s) | 1761 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1029 |
| AspLEI | GCGC | 2 cut(s) | 554, 556 |
| AspS9I | GGNCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| AsuHPI | GGTGA | 3 cut(s) | 218, 2804, 3119 |
| AsuNHI | GCTAGC | 1 cut(s) | 2359 |
| AvaI | CYCGRG | 1 cut(s) | 938 |
| AvaII | GGWCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| AxyI | CCTNAGG | 1 cut(s) | 1217 |
| BamHI | GGATCC | 4 cut(s) | 526, 1462, 1590, 2923 |
| BanII | GRGCYC | 1 cut(s) | 1127 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2448, 2480 |
| BbrPI | CACGTG | 1 cut(s) | 965 |
| BbsI | GAAGAC | 5 cut(s) | 1761, 1820, 1899, 1922, 2066 |
| Bbv12I | GWGCWC | 1 cut(s) | 1127 |
| BbvCI | CCTCAGC | 1 cut(s) | 213 |
| BbvI | GCAGC | 8 cut(s) | 595, 796, 1045, 1128, 1976, 2362, 2365, 2953 |
| BccI | CCATC | 2 cut(s) | 552, 2405 |
| BceAI | ACGGC | 5 cut(s) | 555, 1616, 2013, 2300, 2310 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1316, 1350 |
| BciT130I | CCWGG | 4 cut(s) | 60, 123, 304, 500 |
| BclI | TGATCA | 4 cut(s) | 1570, 1606, 2122, 2746 |
| BcoDI | GTCTC | 9 cut(s) | 500, 608, 863, 1203, 2484, 2641, 2845, 2866, 3128 |
| BcuI | ACTAGT | 1 cut(s) | 233 |
| BfaI | CTAG | 6 cut(s) | 234, 557, 2360, 2970, 3026, 3147 |
| BfmI | CTRYAG | 4 cut(s) | 840, 1101, 2235, 3043 |
| BfuAI | ACCTGC | 1 cut(s) | 1089 |
| BglII | AGATCT | 3 cut(s) | 282, 2587, 2872 |
| BlpI | GCTNAGC | 2 cut(s) | 18, 2112 |
| Bme1390I | CCNGG | 4 cut(s) | 60, 123, 304, 500 |
| Bme18I | GGWCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2476, 2883 |
| BmeT110I | CYCGRG | 1 cut(s) | 938 |
| BmgBI | CACGTC | 2 cut(s) | 661, 1826 |
| BmgT120I | GGNCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| BmiI | GGNNCC | 8 cut(s) | 528, 837, 1464, 1554, 1592, 1745, 2925, 3084 |
| BmrFI | CCNGG | 4 cut(s) | 60, 123, 304, 500 |
| BmrI | ACTGGG | 1 cut(s) | 1648 |
| BmtI | GCTAGC | 1 cut(s) | 2363 |
| BmuI | ACTGGG | 1 cut(s) | 1648 |
| BpiI | GAAGAC | 5 cut(s) | 1761, 1820, 1899, 1922, 2066 |
| BpmI | CTGGAG | 7 cut(s) | 19, 521, 1010, 1311, 1685, 2033, 2844 |
| Bpu10I | CCTNAGC | 2 cut(s) | 213, 3103 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 18, 2112 |
| BpuEI | CTTGAG | 5 cut(s) | 608, 1759, 1880, 2156, 2466 |
| Bsa29I | ATCGAT | 2 cut(s) | 336, 2613 |
| BsaAI | YACGTR | 2 cut(s) | 344, 965 |
| BsaJI | CCNNGG | 3 cut(s) | 59, 303, 725 |
| BsaWI | WCCGGW | 3 cut(s) | 1465, 1761, 3019 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 234, 264, 1056, 1086, 1658, 1688, 3091, 3121 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1701, 2035, 2698 |
| Bse118I | RCCGGY | 1 cut(s) | 1761 |
| Bse1I | ACTGG | 3 cut(s) | 539, 993, 1654 |
| Bse21I | CCTNAGG | 1 cut(s) | 1217 |
| Bse3DI | GCAATG | 2 cut(s) | 186, 1229 |
| BseAI | TCCGGA | 1 cut(s) | 1465 |
| BseBI | CCWGG | 4 cut(s) | 60, 123, 304, 500 |
| BseCI | ATCGAT | 2 cut(s) | 336, 2613 |
| BseDI | CCNNGG | 3 cut(s) | 59, 303, 725 |
| BseGI | GGATG | 7 cut(s) | 366, 769, 808, 913, 2104, 2383, 2731 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1701, 2035, 2698 |
| BseMI | GCAATG | 2 cut(s) | 186, 1229 |
| BseNI | ACTGG | 3 cut(s) | 539, 993, 1654 |
| BsePI | GCGCGC | 1 cut(s) | 552 |
| BseRI | GAGGAG | 5 cut(s) | 54, 518, 2003, 2102, 2841 |
| BseXI | GCAGC | 8 cut(s) | 595, 796, 1045, 1128, 1976, 2362, 2365, 2953 |
| Bsh1236I | CGCG | 3 cut(s) | 552, 554, 3080 |
| BshTI | ACCGGT | 1 cut(s) | 1761 |
| BshVI | ATCGAT | 2 cut(s) | 336, 2613 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1127 |
| BsiHKCI | CYCGRG | 1 cut(s) | 938 |
| BsiSI | CCGG | 3 cut(s) | 1466, 1762, 3020 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1701, 2035, 2698 |
| BsmAI | GTCTC | 9 cut(s) | 500, 608, 863, 1203, 2484, 2641, 2845, 2866, 3128 |
| BsmBI | CGTCTC | 3 cut(s) | 500, 608, 2866 |
| BsmI | GAATGC | 2 cut(s) | 1258, 3048 |
| BsoBI | CYCGRG | 1 cut(s) | 938 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1127 |
| Bsp13I | TCCGGA | 1 cut(s) | 1465 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 18, 2112 |
| Bsp19I | CCATGG | 1 cut(s) | 725 |
| BspACI | CCGC | 6 cut(s) | 1061, 1539, 2149, 2356, 2459, 3080 |
| BspDI | ATCGAT | 2 cut(s) | 336, 2613 |
| BspEI | TCCGGA | 1 cut(s) | 1465 |
| BspFNI | CGCG | 3 cut(s) | 552, 554, 3080 |
| BspHI | TCATGA | 3 cut(s) | 93, 1339, 3060 |
| BspLI | GGNNCC | 8 cut(s) | 528, 837, 1464, 1554, 1592, 1745, 2925, 3084 |
| BspMI | ACCTGC | 1 cut(s) | 1089 |
| BspOI | GCTAGC | 1 cut(s) | 2363 |
| BspQI | GCTCTTC | 1 cut(s) | 1005 |
| BsrDI | GCAATG | 2 cut(s) | 186, 1229 |
| BsrFI | RCCGGY | 1 cut(s) | 1761 |
| BsrI | ACTGG | 3 cut(s) | 539, 993, 1654 |
| BssAI | RCCGGY | 1 cut(s) | 1761 |
| BssECI | CCNNGG | 3 cut(s) | 59, 303, 725 |
| BssHII | GCGCGC | 1 cut(s) | 552 |
| BssNAI | GTATAC | 1 cut(s) | 1090 |
| BssT1I | CCWWGG | 1 cut(s) | 725 |
| Bst1107I | GTATAC | 1 cut(s) | 1090 |
| Bst2UI | CCWGG | 4 cut(s) | 60, 123, 304, 500 |
| Bst4CI | ACNGT | 8 cut(s) | 379, 926, 1475, 2443, 2885, 2991, 3035, 3068 |
| Bst6I | CTCTTC | 4 cut(s) | 767, 1005, 1199, 2871 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 448 |
| BstBAI | YACGTR | 2 cut(s) | 344, 965 |
| BstC8I | GCNNGC | 3 cut(s) | 554, 1408, 2361 |
| BstDSI | CCRYGG | 1 cut(s) | 725 |
| BstF5I | GGATG | 7 cut(s) | 366, 769, 808, 913, 2104, 2383, 2731 |
| BstFNI | CGCG | 3 cut(s) | 552, 554, 3080 |
| BstHHI | GCGC | 2 cut(s) | 554, 556 |
| BstMAI | GTCTC | 9 cut(s) | 500, 608, 863, 1203, 2484, 2641, 2845, 2866, 3128 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 448, 625, 673, 1539, 1628, 2108, 2135, 2356 |
| BstNI | CCWGG | 4 cut(s) | 60, 123, 304, 500 |
| BstSCI | CCNGG | 4 cut(s) | 58, 121, 302, 498 |
| BstSFI | CTRYAG | 4 cut(s) | 840, 1101, 2235, 3043 |
| BstUI | CGCG | 3 cut(s) | 552, 554, 3080 |
| BstV1I | GCAGC | 8 cut(s) | 595, 796, 1045, 1128, 1976, 2362, 2365, 2953 |
| BstV2I | GAAGAC | 5 cut(s) | 1761, 1820, 1899, 1922, 2066 |
| BstX2I | RGATCY | 8 cut(s) | 282, 526, 1048, 1462, 1590, 2587, 2872, 2923 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2822 |
| BstYI | RGATCY | 8 cut(s) | 282, 526, 1048, 1462, 1590, 2587, 2872, 2923 |
| BstZ17I | GTATAC | 1 cut(s) | 1090 |
| Bsu15I | ATCGAT | 2 cut(s) | 336, 2613 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1217 |
| BsuTUI | ATCGAT | 2 cut(s) | 336, 2613 |
| BtgI | CCRYGG | 1 cut(s) | 725 |
| BtgZI | GCGATG | 2 cut(s) | 533, 2519 |
| BtrI | CACGTC | 2 cut(s) | 661, 1826 |
| BtsCI | GGATG | 7 cut(s) | 366, 769, 808, 913, 2104, 2383, 2731 |
| BtsIMutI | CAGTG | 3 cut(s) | 2736, 2996, 3040 |
| BveI | ACCTGC | 1 cut(s) | 1089 |
| Cac8I | GCNNGC | 3 cut(s) | 554, 1408, 2361 |
| CaiI | CAGNNNCTG | 2 cut(s) | 448, 2387 |
| CciI | TCATGA | 3 cut(s) | 93, 1339, 3060 |
| CfoI | GCGC | 2 cut(s) | 554, 556 |
| Cfr10I | RCCGGY | 1 cut(s) | 1761 |
| Cfr13I | GGNCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| ClaI | ATCGAT | 2 cut(s) | 336, 2613 |
| CseI | GACGC | 4 cut(s) | 11, 625, 968, 1319 |
| Csp6I | GTAC | 3 cut(s) | 757, 979, 1675 |
| CspAI | ACCGGT | 1 cut(s) | 1761 |
| CviQI | GTAC | 3 cut(s) | 757, 979, 1675 |
| DraI | TTTAAA | 3 cut(s) | 1348, 1497, 1647 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2476, 2883 |
| Eam1104I | CTCTTC | 4 cut(s) | 767, 1005, 1199, 2871 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2476, 2883 |
| EarI | CTCTTC | 4 cut(s) | 767, 1005, 1199, 2871 |
| Ecl136II | GAGCTC | 1 cut(s) | 1125 |
| Eco130I | CCWWGG | 1 cut(s) | 725 |
| Eco24I | GRGCYC | 1 cut(s) | 1127 |
| Eco47I | GGWCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| Eco53kI | GAGCTC | 1 cut(s) | 1125 |
| Eco57I | CTGAAG | 4 cut(s) | 599, 1728, 2088, 2780 |
| Eco72I | CACGTG | 1 cut(s) | 965 |
| Eco81I | CCTNAGG | 1 cut(s) | 1217 |
| Eco88I | CYCGRG | 1 cut(s) | 938 |
| EcoICRI | GAGCTC | 1 cut(s) | 1125 |
| EcoRII | CCWGG | 4 cut(s) | 58, 121, 302, 498 |
| EcoT14I | CCWWGG | 1 cut(s) | 725 |
| EcoT22I | ATGCAT | 1 cut(s) | 2603 |
| EcoT38I | GRGCYC | 1 cut(s) | 1127 |
| ErhI | CCWWGG | 1 cut(s) | 725 |
| Esp3I | CGTCTC | 3 cut(s) | 500, 608, 2866 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 300, 332, 1541, 1573 |
| FauNDI | CATATG | 4 cut(s) | 247, 2158, 2226, 2597 |
| FbaI | TGATCA | 4 cut(s) | 1570, 1606, 2122, 2746 |
| FblI | GTMKAC | 1 cut(s) | 1089 |
| FokI | GGATG | 7 cut(s) | 373, 776, 815, 920, 2111, 2390, 2738 |
| FriOI | GRGCYC | 1 cut(s) | 1127 |
| FspBI | CTAG | 6 cut(s) | 234, 557, 2360, 2970, 3026, 3147 |
| GlaI | GCGC | 2 cut(s) | 553, 555 |
| GsuI | CTGGAG | 7 cut(s) | 19, 521, 1010, 1311, 1685, 2033, 2844 |
| HapII | CCGG | 3 cut(s) | 1466, 1762, 3020 |
| HgaI | GACGC | 4 cut(s) | 11, 625, 968, 1319 |
| HhaI | GCGC | 2 cut(s) | 554, 556 |
| Hin6I | GCGC | 2 cut(s) | 552, 554 |
| HinP1I | GCGC | 2 cut(s) | 552, 554 |
| HincII | GTYRAC | 4 cut(s) | 430, 483, 1384, 2975 |
| HindII | GTYRAC | 4 cut(s) | 430, 483, 1384, 2975 |
| HindIII | AAGCTT | 1 cut(s) | 1190 |
| HpaI | GTTAAC | 3 cut(s) | 430, 483, 1384 |
| HpaII | CCGG | 3 cut(s) | 1466, 1762, 3020 |
| HphI | GGTGA | 3 cut(s) | 218, 2804, 3119 |
| Hpy166II | GTNNAC | 6 cut(s) | 430, 483, 1090, 1384, 1846, 2975 |
| Hpy8I | GTNNAC | 6 cut(s) | 430, 483, 1090, 1384, 1846, 2975 |
| Hpy99I | CGWCG | 1 cut(s) | 15 |
| HpyAV | CCTTC | 7 cut(s) | 649, 775, 826, 850, 1168, 2336, 3096 |
| HpyCH4III | ACNGT | 8 cut(s) | 379, 926, 1475, 2443, 2885, 2991, 3035, 3068 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 448, 625, 673, 1539, 1628, 2108, 2135, 2356 |
| HspAI | GCGC | 2 cut(s) | 552, 554 |
| Kpn2I | TCCGGA | 1 cut(s) | 1465 |
| Ksp22I | TGATCA | 4 cut(s) | 1570, 1606, 2122, 2746 |
| KspAI | GTTAAC | 3 cut(s) | 430, 483, 1384 |
| LguI | GCTCTTC | 1 cut(s) | 1005 |
| LmnI | GCTCC | 8 cut(s) | 242, 664, 1292, 1558, 1627, 3022, 3082, 3099 |
| Lsp1109I | GCAGC | 8 cut(s) | 595, 796, 1045, 1128, 1976, 2362, 2365, 2953 |
| MaeI | CTAG | 6 cut(s) | 234, 557, 2360, 2970, 3026, 3147 |
| MaeIII | GTNAC | 7 cut(s) | 296, 344, 929, 1132, 2045, 2210, 2732 |
| MfeI | CAATTG | 1 cut(s) | 2954 |
| MflI | RGATCY | 8 cut(s) | 282, 526, 1048, 1462, 1590, 2587, 2872, 2923 |
| MhlI | GDGCHC | 1 cut(s) | 1127 |
| MlyI | GAGTC | 4 cut(s) | 1664, 1889, 1936, 2270 |
| MmeI | TCCRAC | 5 cut(s) | 220, 1831, 2016, 2244, 2663 |
| Mph1103I | ATGCAT | 1 cut(s) | 2603 |
| MroI | TCCGGA | 1 cut(s) | 1465 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1029 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1318, 2600, 2989 |
| MspA1I | CMGCKG | 1 cut(s) | 2356 |
| MspI | CCGG | 3 cut(s) | 1466, 1762, 3020 |
| MspR9I | CCNGG | 4 cut(s) | 60, 123, 304, 500 |
| MunI | CAATTG | 1 cut(s) | 2954 |
| Mva1269I | GAATGC | 2 cut(s) | 1258, 3048 |
| MvaI | CCWGG | 4 cut(s) | 60, 123, 304, 500 |
| MvnI | CGCG | 3 cut(s) | 552, 554, 3080 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 448, 625, 673, 1539, 1628, 2108, 2135, 2356 |
| NcoI | CCATGG | 1 cut(s) | 725 |
| NdeI | CATATG | 4 cut(s) | 247, 2158, 2226, 2597 |
| NheI | GCTAGC | 1 cut(s) | 2359 |
| NlaIV | GGNNCC | 8 cut(s) | 528, 837, 1464, 1554, 1592, 1745, 2925, 3084 |
| NmeAIII | GCCGAG | 3 cut(s) | 814, 1579, 2242 |
| NmuCI | GTSAC | 2 cut(s) | 929, 2732 |
| NsiI | ATGCAT | 1 cut(s) | 2603 |
| OliI | CACNNNNGTG | 1 cut(s) | 2989 |
| PaeR7I | CTCGAG | 1 cut(s) | 938 |
| PagI | TCATGA | 3 cut(s) | 93, 1339, 3060 |
| PauI | GCGCGC | 1 cut(s) | 552 |
| PciSI | GCTCTTC | 1 cut(s) | 1005 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 19 |
| PctI | GAATGC | 2 cut(s) | 1258, 3048 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1029 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2698 |
| PfoI | TCCNGGA | 1 cut(s) | 498 |
| PinAI | ACCGGT | 1 cut(s) | 1761 |
| PleI | GAGTC | 4 cut(s) | 1664, 1889, 1935, 2269 |
| PmaCI | CACGTG | 1 cut(s) | 965 |
| PmlI | CACGTG | 1 cut(s) | 965 |
| PpsI | GAGTC | 4 cut(s) | 1664, 1889, 1935, 2269 |
| Ppu21I | YACGTR | 2 cut(s) | 344, 965 |
| PshBI | ATTAAT | 1 cut(s) | 2910 |
| Psp124BI | GAGCTC | 1 cut(s) | 1127 |
| Psp1406I | AACGTT | 2 cut(s) | 1386, 2642 |
| Psp6I | CCWGG | 4 cut(s) | 58, 121, 302, 498 |
| PspCI | CACGTG | 1 cut(s) | 965 |
| PspGI | CCWGG | 4 cut(s) | 58, 121, 302, 498 |
| PspN4I | GGNNCC | 8 cut(s) | 528, 837, 1464, 1554, 1592, 1745, 2925, 3084 |
| PspPI | GGNCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| PstNI | CAGNNNCTG | 2 cut(s) | 448, 2387 |
| PsuI | RGATCY | 8 cut(s) | 282, 526, 1048, 1462, 1590, 2587, 2872, 2923 |
| PteI | GCGCGC | 1 cut(s) | 552 |
| RsaI | GTAC | 3 cut(s) | 758, 980, 1676 |
| RsaNI | GTAC | 3 cut(s) | 757, 979, 1675 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1318, 2600, 2989 |
| SacI | GAGCTC | 1 cut(s) | 1127 |
| SapI | GCTCTTC | 1 cut(s) | 1005 |
| Sau96I | GGNCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| SchI | GAGTC | 4 cut(s) | 1664, 1889, 1936, 2270 |
| ScrFI | CCNGG | 4 cut(s) | 60, 123, 304, 500 |
| SduI | GDGCHC | 1 cut(s) | 1127 |
| SfcI | CTRYAG | 4 cut(s) | 840, 1101, 2235, 3043 |
| Sfr274I | CTCGAG | 1 cut(s) | 938 |
| SinI | GGWCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| SlaI | CTCGAG | 1 cut(s) | 938 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1318, 2600, 2989 |
| SmlI | CTYRAG | 6 cut(s) | 587, 938, 1774, 1859, 2171, 2481 |
| SmoI | CTYRAG | 6 cut(s) | 587, 938, 1774, 1859, 2171, 2481 |
| SpeI | ACTAGT | 1 cut(s) | 233 |
| SsiI | CCGC | 6 cut(s) | 1061, 1539, 2149, 2356, 2459, 3080 |
| SspI | AATATT | 1 cut(s) | 1614 |
| SspMI | CTAG | 6 cut(s) | 234, 557, 2360, 2970, 3026, 3147 |
| SstI | GAGCTC | 1 cut(s) | 1127 |
| StyD4I | CCNGG | 4 cut(s) | 58, 121, 302, 498 |
| StyI | CCWWGG | 1 cut(s) | 725 |
| TaaI | ACNGT | 8 cut(s) | 379, 926, 1475, 2443, 2885, 2991, 3035, 3068 |
| TaqI | TCGA | 9 cut(s) | 72, 78, 336, 939, 1396, 2445, 2492, 2571, 2613 |
| TatI | WGTACW | 1 cut(s) | 756 |
| TauI | GCSGC | 3 cut(s) | 1542, 2359, 2462 |
| TscAI | CASTG | 3 cut(s) | 2743, 2996, 3040 |
| TseFI | GTSAC | 2 cut(s) | 929, 2732 |
| TseI | GCWGC | 8 cut(s) | 583, 809, 1058, 1141, 1964, 2350, 2353, 2966 |
| Tsp45I | GTSAC | 2 cut(s) | 929, 2732 |
| TspGWI | ACGGA | 5 cut(s) | 171, 524, 1173, 2769, 3148 |
| TspRI | CASTG | 3 cut(s) | 2743, 2996, 3040 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2698 |
| VpaK11BI | GGWCC | 5 cut(s) | 149, 1364, 1471, 1743, 3068 |
| VspI | ATTAAT | 1 cut(s) | 2910 |
| XapI | RAATTY | 5 cut(s) | 413, 817, 1492, 1648, 2774 |
| XhoI | CTCGAG | 1 cut(s) | 938 |
| XmiI | GTMKAC | 1 cut(s) | 1089 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1029 |
| XspI | CTAG | 6 cut(s) | 234, 557, 2360, 2970, 3026, 3147 |
| Zsp2I | ATGCAT | 1 cut(s) | 2603 |