Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0007470

Physical Location & Seq

Genomic Coordinates Forward (+)

1843069 .. 1856625

Gene Structure 13557 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1021900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3150 bp

ATGGCGGAGAGTCGCGCAAAGCGCCCCAAAATTACAAGGGGTGAAGATGACTATAAGCCAGGAAGCATAACTAAGATTGAACTCCATAATTTTATGACCTTTGGTCACATAATGTGCAAACCGGCCCCTCGTCTAAACCTTGTAATTGCACCAAATGGGGCTGGAAAAAGTTCTCTTGTATGTGCAATAGCACTGGGTCTTGGTGGTGAGCCTCAGCTACTTGGAAGGGCGACCAGTGTTGGAGCATATGTGAAGCGTGGTGAAGCGTCCGGTTATATTAAAATAACCTTGAGAGGGGACACCGAAGAGGAGCATATTGAAATTATGCGTAAGATTGATACACGTAACAAGTCTGAATGGTTATACAATGGAAGAGCGGTGCCTAAAAAGGATGTGGTTGAAATCACTCAAAGGTTTAATGTTCAAGTCAACAATTTAACTCAATTTTTACCACAAGATCGTGTCTGTGAGTTCGCCAAATTATCTCCAGTGCAACTTTTAGAAGAGACTGAAAAGGCTGTAGGAGATCCTCAATTGCCGATCCAACATCGTGCACTTATTGAGCAAAGCAAGAAATTGAAAAGAATTGAGCAAGCCGTTGAAAAAAATGGAGAAACTTTGAATCAGTTGAAGGCACTGAATGCTGAACAAGAGAAAGATGTTGAGCGTGTCCGCCAAAGAGAGGAACTTCTTGCAAAGGCTGATACCATGAAAAAAAAATTGCCATGGCTGAAGTATGATATGAAGAAGGCTGAATGCATGGAAGCTATGGAGCAGGAAAAGGATGCAAAGAAGAAGTTGGAGAAAGCTGCAAGAACTCTAAATCAACTGAAAGAACCTATTGAGAAACAAAAACAAGAGAGAGTGGTGATGGAGTCTAAGAGTACAAAAGTAGTAAAAAACATTAGTGAAAATGCAAACAAACGAATGAGACTTTTGGAAAATGTGAACCGCTTGGGAGTGTTAATAAAAGAAAAATACAACGAAATGGAAGAATTGAAGAAGCAAGAAGAATCTCGTCAACAAAGGATCTCAAAAGCAAAAGAGGATCTAGCTGCTGCTGAACTAGAACTTGAAAATCTGACTCCTTATGCGGCCCCTACAGATGAAATTGCGAGATTGCATGCTCAAATTGTGGATCTAGAAGTTTCTGCAAAGGAAAAGAGGGATAAGAAGTCGGAGAAGGAAAAATTTTTAAATCAAAAGAAACTTTCCCTAAACACCTGCCTGGATAAGTTGAAGGAGATGGAAAATAAAAATGGTAAACTCTTACAAGTATTAAAAAATTCTGGAGCAGATAAAATAGTTGATGCTTATAAATGGTTGCAAGAACATCGTCATCAGTTCAATAAGGAGGTGTATGGCCCTGTTTTGCTTGAGGTTAATGTGCCAGATCGAGTTCACGCTGACTACTTAGGTGGTCATGTTCCTAATTACATGTGGAAGTCTTTCATAACTCAAGATTCTCGTGACCGGGACTTTTTGGTAAAAAATCTCAAGTCCTTTGATGTTCCAGTTTTAAATTATACGGGAAATGGAACTTGTCACAGAGAACCCTTTCAAATTTCTGAGCAGATGAGTGCACTGGAGATCTATTCGCGGCTTGACCAAGTTTTTGATGCTCCTACTGCCGTGAAGGAGGTTTTGATTAGCCAATTTGGCTTGGATAGATCATATATTGGGTCCAGGACTACGGATCAGAGGGCTGATGAGGTTTCGAAGTTAGGGATTTTAGATTTTTGGACCCCTGAGAATCACTACCGATGGTCAGTATCAAGATATGGTGGTCATAGATCTGCCAGTGTAGAATCAGTCACTCGTTCTCAACTCTTTTTGTGTGGTTTGGAGACTGGGGAAGTTGAGTCATTGATGTCCAAAAAAAGGGAACTTGAAGAATCTATTACTGCTTTACAGGATATTGTTAGATCACTTCAGATTGAGGAAAGACAAGCAGAAAATGAAGCAGCAAAATTTCAGAAACAGAGGGAGGAGATTATCAGAAATGTACAGGATGGGAAGAGAAAACAACGTGAAATAGAAAACCGTATTGCACAAAGGAAAAAGAAATTAGAATCTATGGAGAAGGAGGATGACCTGGATACTAGTATGGCGAAGCTCAATGAACAATCTGCAAAATATATGATTGACAGGTTCCATTCTGCAATGGAAATTAAGAGTCTACTTGCTGAGGCTGTTTCTTTCAAACAAAGTTATGCTGAAAAGCACATGATGGTCATTGAGTTTGATGCAAAGATTAAAGAAATGGAGGTTAATATCAAACAACATGAAAAGGTTGCTCTTCAAGCAAGCCTGCACCATGAGGAGTGTAAGAAGGCAGAGGAGGATTGCCGACAGCAACTTTTAGCAGCCAAGAAGAATGCAGAATCCATTGCGATGATCACTCCAGCACTTCAGAAGGAATTTCTTGAGATGCCTACTACAATTGAAGAATTGGAAGCTGCTATACAGGAAAATATTTCTCAAGCTAATTCTATTCTTTTTCTAAATCAAAATATACTGAAAGAATATGAAGACCGTCAGCAGAAGATTGAAGAATATTCAGCGAAACTGGAAGCTGATAAAACAGAGCTTAGTAGGTGTATAGCTGAAGTGGATAATCTGAAAGGAACTTGGCTCCCAACATTAAGAAGCCTTGTTGCTCAGATAAATGAGACTTTCAGTAGGAACTTCCAAGAGATGGCGGTTGCAGGGGAAGTTTTATTGGATGAGCATGAAATTGACTTCGACCAATATGGGATACTTATAAAAGTAAAATTCAGGCAAGCGGGGCAGCTACAAGTTCTCAGTGCCCACCATCAATCCGGAGGGGAGCGTTCGGTTTCAACTATACTTTATCTTGTTTCTCTTCAAGACCTTACAAATTGCCCGTTTAGGGTGGTTGATGAGATAAATCAAGGGATGGATCCGATAAATGAAAGAAATATGTTCCAGCAGTTGGTAAGAGCAGCATCTCAACCAAATACACCACAGTGTTTCTTGCTTACCCCGAAGTTGCTACCAGATCTGGTTTACAGTGACGAGTGCAGTGTTTTGAACATAAAAACTGGCCCCTATGCTGGTTCATGGGCGAATGGAGACTGGAGTGAGGGCGATAGCTACAGAAACATTCTTGGAAAAAGGGGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000819 GO:0005575 GO:0005911 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0009506 GO:0009987 GO:0016043 GO:0022402 GO:0030054 GO:0051276 GO:0055044 GO:0071840 GO:0098813

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_23 SMC_N

Protein Analysis

1050

Amino Acids

120.26

Weight (kDa)

6.64

Isoelectric Point (pI)

49.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMC_N	PF02463	23 - 989	1.1e-13	RecF/RecN/SMC N terminal domain
AAA_23	PF13476	25 - 281	4.2e-08	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15920
fragaria_vesca	FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640
malus_domestica	MD07G1021900.v1.1
prunus_persica	Prupe.2G022000_v2.0.a1 Prupe.2G022000_v2.0.a1
pyrus_communis	pycom07g01660
rosa_chinensis	RchiOBHm_Chr1g0317911
rosa_laevigata	RLG00000029591 RLG00000030577
rosa_multiflora	Rmu_co8249473.1_g000001 Rmu_sc0000654.1_g000055 Rmu_sc0002922.1_g000001 Rmu_ssc0000008.1_g000048
rosa_roxburghii	Rroxscaffold_4G00330130
rosa_rugosa	Rorug01G0018500 Rorug01G0018600
rosa_samantha	Rh1AG030100 Rh1BG026200 Rh1CG028700 Rh1DG041400
rosa_wichuraiana	Rw1G002270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1317, 2765
AarI	CACCTGC	1 cut(s)	1232
Acc36I	ACCTGC	1 cut(s)	1232
AccB1I	GGYRCC	1 cut(s)	379
AccB7I	CCANNNNNTGG	2 cut(s)	2698, 2956
AccBSI	CCGCTC	1 cut(s)	377
AccI	GTMKAC	1 cut(s)	2179
AccII	CGCG	2 cut(s)	15, 1600
AccIII	TCCGGA	1 cut(s)	2822
AciI	CCGC	8 cut(s)	5, 377, 673, 952, 1094, 1600, 2702, 2786
AclWI	GGATC	8 cut(s)	521, 535, 1037, 1056, 1146, 1704, 2918, 2931
AcsI	RAATTY	6 cut(s)	1190, 1285, 1563, 1970, 2420, 2774
AcuI	CTGAAG	4 cut(s)	752, 1916, 2396, 2628
AfaI	GTAC	2 cut(s)	886, 2007
AfiI	CCNNNNNNNGG	7 cut(s)	294, 682, 1881, 2698, 2893, 2956, 3077
AflIII	ACRYGT	2 cut(s)	341, 1437
AhdI	GACNNNNNGTC	1 cut(s)	102
AhlI	ACTAGT	1 cut(s)	2102
AjnI	CCWGG	4 cut(s)	58, 1227, 1685, 2094
AleI	CACNNNNGTG	1 cut(s)	2989
Alw21I	GWGCWC	2 cut(s)	556, 1585
Alw26I	GTCTC	5 cut(s)	500, 925, 1841, 2666, 3090
Alw44I	GTGCAC	2 cut(s)	552, 1581
AlwI	GGATC	8 cut(s)	521, 535, 1037, 1056, 1146, 1704, 2918, 2931
Aor13HI	TCCGGA	1 cut(s)	2822
AoxI	GGCC	4 cut(s)	123, 1095, 1363, 3067
ApaLI	GTGCAC	2 cut(s)	552, 1581
ApeKI	GCWGC	8 cut(s)	809, 1055, 1058, 1964, 2366, 2459, 2791, 2966
ApoI	RAATTY	6 cut(s)	1190, 1285, 1563, 1970, 2420, 2774
ArsI	GACNNNNNNTTYG	2 cut(s)	1598, 1630
Asp700I	GAANNNNTTC	3 cut(s)	169, 1448, 1557
AspLEI	GCGC	2 cut(s)	17, 24
AspS9I	GGNCC	6 cut(s)	124, 1096, 1364, 1683, 1743, 3068
AsuC2I	CCSGG	1 cut(s)	1475
AsuHPI	GGTGA	4 cut(s)	53, 218, 272, 880
AsuII	TTCGAA	1 cut(s)	1718
AvaII	GGWCC	2 cut(s)	1683, 1743
BaeGI	GKGCMC	3 cut(s)	556, 1585, 2812
BamHI	GGATCC	1 cut(s)	2923
BanI	GGYRCC	1 cut(s)	379
BarI	GAAGNNNNNNTAC	2 cut(s)	2448, 2480
BauI	CACGAG	1 cut(s)	1467
BbsI	GAAGAC	1 cut(s)	2538
Bbv12I	GWGCWC	2 cut(s)	556, 1585
BbvCI	CCTCAGC	2 cut(s)	213, 2187
BbvI	GCAGC	8 cut(s)	796, 1042, 1045, 1976, 2378, 2446, 2803, 2978
BccI	CCATC	8 cut(s)	865, 1240, 1758, 2006, 2224, 2692, 2823, 2914
BceAI	ACGGC	2 cut(s)	581, 1616
BcgI	CGANNNNNNTGC	2 cut(s)	1316, 1350
BciT130I	CCWGG	4 cut(s)	60, 1229, 1687, 2096
BciVI	GTATCC	2 cut(s)	2092, 2751
BclI	TGATCA	1 cut(s)	2397
BcnI	CCSGG	1 cut(s)	1475
BcoDI	GTCTC	5 cut(s)	500, 925, 1841, 2666, 3090
BcuI	ACTAGT	1 cut(s)	2102
BfaI	CTAG	4 cut(s)	1052, 1067, 1142, 2103
BfmI	CTRYAG	3 cut(s)	519, 1101, 3118
BfoI	RGCGCY	1 cut(s)	25
BfuAI	ACCTGC	1 cut(s)	1232
BfuI	GTATCC	2 cut(s)	2092, 2751
BglI	GCCNNNNNGGC	1 cut(s)	1659
BglII	AGATCT	3 cut(s)	1590, 1793, 3022
Bme1390I	CCNGG	5 cut(s)	60, 1229, 1475, 1687, 2096
Bme18I	GGWCC	2 cut(s)	1683, 1743
BmeRI	GACNNNNNGTC	1 cut(s)	102
BmgT120I	GGNCC	6 cut(s)	124, 1096, 1364, 1683, 1743, 3068
BmiI	GGNNCC	9 cut(s)	126, 381, 1098, 1684, 1745, 2153, 2636, 2925, 3070
BmrFI	CCNGG	5 cut(s)	60, 1229, 1475, 1687, 2096
BmrI	ACTGGG	2 cut(s)	203, 1860
BmsI	GCATC	6 cut(s)	775, 1300, 1609, 2236, 2421, 2978
BmuI	ACTGGG	2 cut(s)	203, 1860
BpiI	GAAGAC	1 cut(s)	2538
BpmI	CTGGAG	5 cut(s)	471, 1311, 1607, 2388, 3121
Bpu10I	CCTNAGC	2 cut(s)	213, 2187
Bpu14I	TTCGAA	1 cut(s)	1718
BpuEI	CTTGAG	6 cut(s)	310, 1397, 1443, 1481, 2447, 2466
BpuMI	CCSGG	1 cut(s)	1475
BsaAI	YACGTR	1 cut(s)	344
BsaJI	CCNNGG	1 cut(s)	725
BsaWI	WCCGGW	2 cut(s)	269, 2822
BsaXI	ACNNNNNCTCC	2 cut(s)	234, 264
Bsc4I	CCNNNNNNNGG	7 cut(s)	294, 682, 1881, 2698, 2893, 2956, 3077
Bse118I	RCCGGY	1 cut(s)	121
Bse3DI	GCAATG	2 cut(s)	2169, 2388
BseAI	TCCGGA	1 cut(s)	2822
BseBI	CCWGG	4 cut(s)	60, 1229, 1687, 2096
BseDI	CCNNGG	1 cut(s)	725
BseGI	GGATG	6 cut(s)	397, 790, 2017, 2095, 2731, 2925
BseLI	CCNNNNNNNGG	7 cut(s)	294, 682, 1881, 2698, 2893, 2956, 3077
BseMI	GCAATG	2 cut(s)	2169, 2388
BseMII	CTCAG	6 cut(s)	227, 1560, 1740, 2178, 2675, 2818
BseRI	GAGGAG	4 cut(s)	323, 2003, 2336, 2354
BseSI	GKGCMC	3 cut(s)	556, 1585, 2812
BseXI	GCAGC	8 cut(s)	796, 1042, 1045, 1976, 2378, 2446, 2803, 2978
BsgI	GTGCAG	2 cut(s)	2297, 3064
Bsh1236I	CGCG	2 cut(s)	15, 1600
BshFI	GGCC	4 cut(s)	125, 1097, 1365, 3069
BshNI	GGYRCC	1 cut(s)	379
BsiHKAI	GWGCWC	2 cut(s)	556, 1585
BsiSI	CCGG	4 cut(s)	122, 270, 1474, 2823
BslFI	GGGAC	2 cut(s)	311, 1490
BslI	CCNNNNNNNGG	7 cut(s)	294, 682, 1881, 2698, 2893, 2956, 3077
BsmAI	GTCTC	5 cut(s)	500, 925, 1841, 2666, 3090
BsmFI	GGGAC	2 cut(s)	311, 1490
BsmI	GAATGC	3 cut(s)	646, 761, 2383
BsnI	GGCC	4 cut(s)	125, 1097, 1365, 3069
Bsp119I	TTCGAA	1 cut(s)	1718
Bsp1286I	GDGCHC	3 cut(s)	556, 1585, 2812
Bsp13I	TCCGGA	1 cut(s)	2822
Bsp1407I	TGTACA	1 cut(s)	2005
Bsp19I	CCATGG	1 cut(s)	725
BspACI	CCGC	8 cut(s)	5, 377, 673, 952, 1094, 1600, 2702, 2786
BspANI	GGCC	4 cut(s)	125, 1097, 1365, 3069
BspCNI	CTCAG	6 cut(s)	226, 1561, 1741, 2179, 2674, 2817
BspEI	TCCGGA	1 cut(s)	2822
BspFNI	CGCG	2 cut(s)	15, 1600
BspLI	GGNNCC	9 cut(s)	126, 381, 1098, 1684, 1745, 2153, 2636, 2925, 3070
BspMI	ACCTGC	1 cut(s)	1232
BspPI	GGATC	8 cut(s)	521, 535, 1037, 1056, 1146, 1704, 2918, 2931
BspQI	GCTCTTC	2 cut(s)	367, 2304
BspT104I	TTCGAA	1 cut(s)	1718
BspT107I	GGYRCC	1 cut(s)	379
BsrBI	CCGCTC	1 cut(s)	377
BsrDI	GCAATG	2 cut(s)	2169, 2388
BsrFI	RCCGGY	1 cut(s)	121
BsrGI	TGTACA	1 cut(s)	2005
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	1 cut(s)	725
BssSI	CACGAG	1 cut(s)	1467
BssT1I	CCWWGG	1 cut(s)	725
Bst2BI	CACGAG	1 cut(s)	1467
Bst2UI	CCWGG	4 cut(s)	60, 1229, 1687, 2096
Bst4CI	ACNGT	4 cut(s)	2045, 2537, 2991, 3035
Bst6I	CTCTTC	6 cut(s)	300, 367, 498, 2012, 2304, 2871
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstAUI	TGTACA	1 cut(s)	2005
BstBAI	YACGTR	1 cut(s)	344
BstBI	TTCGAA	1 cut(s)	1718
BstC8I	GCNNGC	5 cut(s)	594, 1125, 2308, 2312, 2784
BstDSI	CCRYGG	1 cut(s)	725
BstF5I	GGATG	6 cut(s)	397, 790, 2017, 2095, 2731, 2925
BstFNI	CGCG	2 cut(s)	15, 1600
BstH2I	RGCGCY	1 cut(s)	25
BstHHI	GCGC	2 cut(s)	17, 24
BstMAI	GTCTC	5 cut(s)	500, 925, 1841, 2666, 3090
BstMWI	GCNNNNNNNGC	6 cut(s)	21, 641, 1628, 1659, 2303, 2788
BstNI	CCWGG	4 cut(s)	60, 1229, 1687, 2096
BstNSI	RCATGY	2 cut(s)	1127, 1441
BstSCI	CCNGG	5 cut(s)	58, 1227, 1473, 1685, 2094
BstSFI	CTRYAG	3 cut(s)	519, 1101, 3118
BstSLI	GKGCMC	3 cut(s)	556, 1585, 2812
BstUI	CGCG	2 cut(s)	15, 1600
BstV1I	GCAGC	8 cut(s)	796, 1042, 1045, 1976, 2378, 2446, 2803, 2978
BstV2I	GAAGAC	1 cut(s)	2538
BstX2I	RGATCY	8 cut(s)	526, 1029, 1048, 1138, 1590, 1793, 2923, 3022
BstYI	RGATCY	8 cut(s)	526, 1029, 1048, 1138, 1590, 1793, 2923, 3022
BsuI	GTATCC	2 cut(s)	2092, 2751
BsuRI	GGCC	4 cut(s)	125, 1097, 1365, 3069
BtgI	CCRYGG	1 cut(s)	725
BtgZI	GCGATG	1 cut(s)	2408
BtsCI	GGATG	6 cut(s)	397, 790, 2017, 2095, 2731, 2925
BtsI	GCAGTG	1 cut(s)	3052
BveI	ACCTGC	1 cut(s)	1232
Cac8I	GCNNGC	5 cut(s)	594, 1125, 2308, 2312, 2784
CfoI	GCGC	2 cut(s)	17, 24
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	6 cut(s)	124, 1096, 1364, 1683, 1743, 3068
CseI	GACGC	1 cut(s)	255
Csp6I	GTAC	2 cut(s)	885, 2006
CviQI	GTAC	2 cut(s)	885, 2006
DraI	TTTAAA	2 cut(s)	1197, 1521
DriI	GACNNNNNGTC	1 cut(s)	102
Eam1104I	CTCTTC	6 cut(s)	300, 367, 498, 2012, 2304, 2871
Eam1105I	GACNNNNNGTC	1 cut(s)	102
EarI	CTCTTC	6 cut(s)	300, 367, 498, 2012, 2304, 2871
EciI	GGCGGA	2 cut(s)	20, 662
Eco130I	CCWWGG	1 cut(s)	725
Eco47I	GGWCC	2 cut(s)	1683, 1743
Eco57I	CTGAAG	4 cut(s)	752, 1916, 2396, 2628
EcoRII	CCWGG	4 cut(s)	58, 1227, 1685, 2094
EcoT14I	CCWWGG	1 cut(s)	725
EcoT22I	ATGCAT	1 cut(s)	761
ErhI	CCWWGG	1 cut(s)	725
FaqI	GGGAC	2 cut(s)	311, 1490
FauI	CCCGC	1 cut(s)	2779
FauNDI	CATATG	1 cut(s)	247
FbaI	TGATCA	1 cut(s)	2397
FblI	GTMKAC	1 cut(s)	2179
FokI	GGATG	6 cut(s)	404, 797, 2024, 2102, 2738, 2932
FspBI	CTAG	4 cut(s)	1052, 1067, 1142, 2103
GlaI	GCGC	2 cut(s)	16, 23
GsuI	CTGGAG	5 cut(s)	471, 1311, 1607, 2388, 3121
HaeII	RGCGCY	1 cut(s)	25
HaeIII	GGCC	4 cut(s)	125, 1097, 1365, 3069
HapII	CCGG	4 cut(s)	122, 270, 1474, 2823
HgaI	GACGC	1 cut(s)	255
HhaI	GCGC	2 cut(s)	17, 24
Hin6I	GCGC	2 cut(s)	15, 22
HinP1I	GCGC	2 cut(s)	15, 22
HincII	GTYRAC	2 cut(s)	430, 1022
HindII	GTYRAC	2 cut(s)	430, 1022
HpaII	CCGG	4 cut(s)	122, 270, 1474, 2823
HphI	GGTGA	4 cut(s)	53, 218, 272, 880
Hpy166II	GTNNAC	9 cut(s)	430, 554, 949, 1022, 1265, 1402, 1583, 2180, 3031
Hpy188III	TCNNGA	8 cut(s)	1142, 1290, 1460, 1469, 1776, 2426, 2823, 2870
Hpy8I	GTNNAC	9 cut(s)	430, 554, 949, 1022, 1265, 1402, 1583, 2180, 3031
HpyAV	CCTTC	9 cut(s)	219, 625, 742, 1177, 1234, 1630, 2077, 2326, 2410
HpyCH4III	ACNGT	4 cut(s)	2045, 2537, 2991, 3035
HpyCH4IV	ACGT	2 cut(s)	343, 2029
HpyF10VI	GCNNNNNNNGC	6 cut(s)	21, 641, 1628, 1659, 2303, 2788
HpySE526I	ACGT	2 cut(s)	343, 2029
HspAI	GCGC	2 cut(s)	15, 22
Kpn2I	TCCGGA	1 cut(s)	2822
Ksp22I	TGATCA	1 cut(s)	2397
LguI	GCTCTTC	2 cut(s)	367, 2304
LmnI	GCTCC	7 cut(s)	242, 310, 772, 1292, 1627, 2640, 2830
Lsp1109I	GCAGC	8 cut(s)	796, 1042, 1045, 1976, 2378, 2446, 2803, 2978
LweI	GCATC	6 cut(s)	775, 1300, 1609, 2236, 2421, 2978
MaeI	CTAG	4 cut(s)	1052, 1067, 1142, 2103
MaeII	ACGT	2 cut(s)	343, 2029
MaeIII	GTNAC	6 cut(s)	104, 344, 1469, 1544, 1813, 3035
MbiI	CCGCTC	1 cut(s)	377
MfeI	CAATTG	2 cut(s)	533, 2442
MflI	RGATCY	8 cut(s)	526, 1029, 1048, 1138, 1590, 1793, 2923, 3022
MhlI	GDGCHC	3 cut(s)	556, 1585, 2812
MlyI	GAGTC	5 cut(s)	19, 884, 1078, 1871, 2185
MmeI	TCCRAC	4 cut(s)	220, 568, 780, 1158
Mph1103I	ATGCAT	1 cut(s)	761
MroI	TCCGGA	1 cut(s)	2822
MroXI	GAANNNNTTC	3 cut(s)	169, 1448, 1557
MslI	CAYNNNNRTG	2 cut(s)	2393, 2989
MspI	CCGG	4 cut(s)	122, 270, 1474, 2823
MspR9I	CCNGG	5 cut(s)	60, 1229, 1475, 1687, 2096
MunI	CAATTG	2 cut(s)	533, 2442
Mva1269I	GAATGC	3 cut(s)	646, 761, 2383
MvaI	CCWGG	4 cut(s)	60, 1229, 1687, 2096
MvnI	CGCG	2 cut(s)	15, 1600
MwoI	GCNNNNNNNGC	6 cut(s)	21, 641, 1628, 1659, 2303, 2788
NciI	CCSGG	1 cut(s)	1475
NcoI	CCATGG	1 cut(s)	725
NdeI	CATATG	1 cut(s)	247
NlaIV	GGNNCC	9 cut(s)	126, 381, 1098, 1684, 1745, 2153, 2636, 2925, 3070
NmuCI	GTSAC	5 cut(s)	104, 1469, 1544, 1813, 3035
NsiI	ATGCAT	1 cut(s)	761
NspI	RCATGY	2 cut(s)	1127, 1441
NspV	TTCGAA	1 cut(s)	1718
OliI	CACNNNNGTG	1 cut(s)	2989
PaeI	GCATGC	1 cut(s)	1127
PaqCI	CACCTGC	1 cut(s)	1232
PciI	ACATGT	1 cut(s)	1437
PciSI	GCTCTTC	2 cut(s)	367, 2304
PctI	GAATGC	3 cut(s)	646, 761, 2383
PdmI	GAANNNNTTC	3 cut(s)	169, 1448, 1557
PfeI	GAWTC	8 cut(s)	622, 1013, 1463, 1753, 1808, 1895, 2072, 2384
PflMI	CCANNNNNTGG	2 cut(s)	2698, 2956
PfoI	TCCNGGA	1 cut(s)	1685
PleI	GAGTC	5 cut(s)	18, 883, 1078, 1870, 2184
PpsI	GAGTC	5 cut(s)	18, 883, 1078, 1870, 2184
Ppu21I	YACGTR	1 cut(s)	344
PscI	ACATGT	1 cut(s)	1437
PsiI	TTATAA	2 cut(s)	1317, 2765
Psp6I	CCWGG	4 cut(s)	58, 1227, 1685, 2094
PspGI	CCWGG	4 cut(s)	58, 1227, 1685, 2094
PspN4I	GGNNCC	9 cut(s)	126, 381, 1098, 1684, 1745, 2153, 2636, 2925, 3070
PspPI	GGNCC	6 cut(s)	124, 1096, 1364, 1683, 1743, 3068
PsuI	RGATCY	8 cut(s)	526, 1029, 1048, 1138, 1590, 1793, 2923, 3022
RsaI	GTAC	2 cut(s)	886, 2007
RsaNI	GTAC	2 cut(s)	885, 2006
RseI	CAYNNNNRTG	2 cut(s)	2393, 2989
SapI	GCTCTTC	2 cut(s)	367, 2304
Sau96I	GGNCC	6 cut(s)	124, 1096, 1364, 1683, 1743, 3068
SchI	GAGTC	5 cut(s)	19, 884, 1078, 1871, 2185
ScrFI	CCNGG	5 cut(s)	60, 1229, 1475, 1687, 2096
SduI	GDGCHC	3 cut(s)	556, 1585, 2812
SfaNI	GCATC	6 cut(s)	775, 1300, 1609, 2236, 2421, 2978
SfcI	CTRYAG	3 cut(s)	519, 1101, 3118
SfuI	TTCGAA	1 cut(s)	1718
SinI	GGWCC	2 cut(s)	1683, 1743
SmiMI	CAYNNNNRTG	2 cut(s)	2393, 2989
SmlI	CTYRAG	6 cut(s)	289, 1376, 1458, 1496, 2426, 2481
SmoI	CTYRAG	6 cut(s)	289, 1376, 1458, 1496, 2426, 2481
SpeI	ACTAGT	1 cut(s)	2102
SphI	GCATGC	1 cut(s)	1127
SsiI	CCGC	8 cut(s)	5, 377, 673, 952, 1094, 1600, 2702, 2786
SspI	AATATT	2 cut(s)	2476, 2558
SspMI	CTAG	4 cut(s)	1052, 1067, 1142, 2103
StyD4I	CCNGG	5 cut(s)	58, 1227, 1473, 1685, 2094
StyI	CCWWGG	1 cut(s)	725
TaaI	ACNGT	4 cut(s)	2045, 2537, 2991, 3035
TaiI	ACGT	2 cut(s)	346, 2032
TaqI	TCGA	3 cut(s)	1396, 1718, 2745
TatI	WGTACW	2 cut(s)	884, 2005
TauI	GCSGC	2 cut(s)	1097, 1603
TfiI	GAWTC	8 cut(s)	622, 1013, 1463, 1753, 1808, 1895, 2072, 2384
TseFI	GTSAC	5 cut(s)	104, 1469, 1544, 1813, 3035
TseI	GCWGC	8 cut(s)	809, 1055, 1058, 1964, 2366, 2459, 2791, 2966
Tsp45I	GTSAC	5 cut(s)	104, 1469, 1544, 1813, 3035
TspGWI	ACGGA	1 cut(s)	1709
Van91I	CCANNNNNTGG	2 cut(s)	2698, 2956
VneI	GTGCAC	2 cut(s)	552, 1581
VpaK11BI	GGWCC	2 cut(s)	1683, 1743
XapI	RAATTY	6 cut(s)	1190, 1285, 1563, 1970, 2420, 2774
XbaI	TCTAGA	1 cut(s)	1141
XceI	RCATGY	2 cut(s)	1127, 1441
XmiI	GTMKAC	1 cut(s)	2179
XmnI	GAANNNNTTC	3 cut(s)	169, 1448, 1557
XspI	CTAG	4 cut(s)	1052, 1067, 1142, 2103
Zsp2I	ATGCAT	1 cut(s)	761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.