Structural maintenance of chromosomes protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15920 |
| fragaria_vesca | FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 |
| malus_domestica | MD07G1021900.v1.1 |
| prunus_persica | Prupe.2G022000_v2.0.a1 Prupe.2G022000_v2.0.a1 |
| pyrus_communis | pycom07g01660 |
| rosa_chinensis | RchiOBHm_Chr1g0317911 |
| rosa_laevigata | RLG00000029591 RLG00000030577 |
| rosa_multiflora | Rmu_co8249473.1_g000001 Rmu_sc0000654.1_g000055 Rmu_sc0002922.1_g000001 Rmu_ssc0000008.1_g000048 |
| rosa_roxburghii | Rroxscaffold_4G00330130 |
| rosa_rugosa | Rorug01G0018500 Rorug01G0018600 |
| rosa_samantha | Rh1AG030100 Rh1BG026200 Rh1CG028700 Rh1DG041400 |
| rosa_wichuraiana | Rw1G002270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1317, 2765 |
| AccB1I | GGYRCC | 1 cut(s) | 379 |
| AccI | GTMKAC | 2 cut(s) | 894, 2179 |
| AccII | CGCG | 2 cut(s) | 15, 2031 |
| AccIII | TCCGGA | 1 cut(s) | 161 |
| AciI | CCGC | 2 cut(s) | 1785, 2536 |
| AclI | AACGTT | 1 cut(s) | 1819 |
| AclWI | GGATC | 9 cut(s) | 153, 166, 521, 535, 1056, 2405, 2918, 2931, 3083 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 6 cut(s) | 298, 933, 1285, 1343, 1563, 2774 |
| AcuI | CTGAAG | 4 cut(s) | 1259, 1517, 1916, 1958 |
| AfaI | GTAC | 4 cut(s) | 492, 969, 2007, 2052 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 294, 958, 2893 |
| AflII | CTTAAG | 1 cut(s) | 2621 |
| AjnI | CCWGG | 6 cut(s) | 58, 2094, 2393, 2466, 3071, 3102 |
| AleI | CACNNNNGTG | 1 cut(s) | 2989 |
| Alw21I | GWGCWC | 5 cut(s) | 84, 173, 1129, 1585, 1624 |
| Alw26I | GTCTC | 6 cut(s) | 132, 469, 500, 698, 1841, 2666 |
| Alw44I | GTGCAC | 1 cut(s) | 1581 |
| AlwI | GGATC | 9 cut(s) | 153, 166, 521, 535, 1056, 2405, 2918, 2931, 3083 |
| Ama87I | CYCGRG | 1 cut(s) | 2411 |
| Aor13HI | TCCGGA | 1 cut(s) | 161 |
| AoxI | GGCC | 3 cut(s) | 3, 1363, 3067 |
| ApaLI | GTGCAC | 1 cut(s) | 1581 |
| ApoI | RAATTY | 6 cut(s) | 298, 933, 1285, 1343, 1563, 2774 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1598, 1630 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 405, 687, 1448, 1557 |
| AspLEI | GCGC | 5 cut(s) | 17, 24, 556, 2031, 2544 |
| AspS9I | GGNCC | 4 cut(s) | 149, 1364, 1683, 3068 |
| AsuC2I | CCSGG | 1 cut(s) | 123 |
| AsuHPI | GGTGA | 5 cut(s) | 53, 218, 536, 1205, 3119 |
| AvaI | CYCGRG | 1 cut(s) | 2411 |
| AvaII | GGWCC | 2 cut(s) | 149, 1683 |
| BaeGI | GKGCMC | 2 cut(s) | 1585, 2812 |
| BamHI | GGATCC | 2 cut(s) | 158, 2923 |
| BanI | GGYRCC | 1 cut(s) | 379 |
| BanII | GRGCYC | 3 cut(s) | 84, 173, 1279 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 740, 772 |
| BauI | CACGAG | 1 cut(s) | 176 |
| BbsI | GAAGAC | 2 cut(s) | 999, 2538 |
| Bbv12I | GWGCWC | 5 cut(s) | 84, 173, 1129, 1585, 1624 |
| BbvCI | CCTCAGC | 1 cut(s) | 2187 |
| BccI | CCATC | 5 cut(s) | 1240, 1412, 2158, 2823, 2914 |
| BceAI | ACGGC | 3 cut(s) | 1616, 1920, 2042 |
| BciT130I | CCWGG | 6 cut(s) | 60, 2096, 2395, 2468, 3073, 3104 |
| BciVI | GTATCC | 1 cut(s) | 2092 |
| BclI | TGATCA | 2 cut(s) | 1696, 2746 |
| BcnI | CCSGG | 1 cut(s) | 123 |
| BcoDI | GTCTC | 6 cut(s) | 132, 469, 500, 698, 1841, 2666 |
| BfaI | CTAG | 6 cut(s) | 500, 692, 965, 1067, 1650, 1776 |
| BfmI | CTRYAG | 2 cut(s) | 597, 1101 |
| BfoI | RGCGCY | 2 cut(s) | 25, 2545 |
| BfrI | CTTAAG | 1 cut(s) | 2621 |
| BfuI | GTATCC | 1 cut(s) | 2092 |
| BglII | AGATCT | 1 cut(s) | 3022 |
| BlpI | GCTNAGC | 1 cut(s) | 1062 |
| Bme1390I | CCNGG | 7 cut(s) | 60, 123, 2096, 2395, 2468, 3073, 3104 |
| Bme18I | GGWCC | 2 cut(s) | 149, 1683 |
| BmeT110I | CYCGRG | 1 cut(s) | 2411 |
| BmgT120I | GGNCC | 4 cut(s) | 149, 1364, 1683, 3068 |
| BmiI | GGNNCC | 6 cut(s) | 160, 381, 1684, 2925, 3070, 3101 |
| BmrFI | CCNGG | 7 cut(s) | 60, 123, 2096, 2395, 2468, 3073, 3104 |
| BmrI | ACTGGG | 4 cut(s) | 203, 1361, 1595, 1860 |
| BmsI | GCATC | 8 cut(s) | 275, 775, 1300, 1599, 2236, 2323, 2421, 2978 |
| BmuI | ACTGGG | 4 cut(s) | 203, 1361, 1595, 1860 |
| BpiI | GAAGAC | 2 cut(s) | 999, 2538 |
| BpmI | CTGGAG | 5 cut(s) | 471, 1731, 2388, 2844, 3118 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2187, 2591 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1062 |
| BpuEI | CTTGAG | 7 cut(s) | 310, 1018, 1397, 1443, 2339, 2447, 2466 |
| BpuMI | CCSGG | 1 cut(s) | 123 |
| BsaAI | YACGTR | 1 cut(s) | 1124 |
| BsaI | GGTCTC | 2 cut(s) | 132, 698 |
| BsaJI | CCNNGG | 5 cut(s) | 122, 725, 1686, 3071, 3103 |
| BsaWI | WCCGGW | 3 cut(s) | 161, 269, 1513 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 234, 264, 3091, 3121 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 294, 958, 2893 |
| Bse1I | ACTGG | 7 cut(s) | 198, 234, 488, 1367, 1590, 1811, 1855 |
| BseAI | TCCGGA | 1 cut(s) | 161 |
| BseBI | CCWGG | 6 cut(s) | 60, 2096, 2395, 2468, 3073, 3104 |
| BseDI | CCNNGG | 5 cut(s) | 122, 725, 1686, 3071, 3103 |
| BseGI | GGATG | 7 cut(s) | 266, 790, 2017, 2095, 2731, 2925, 2969 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 294, 958, 2893 |
| BseNI | ACTGG | 7 cut(s) | 198, 234, 488, 1367, 1590, 1811, 1855 |
| BseRI | GAGGAG | 3 cut(s) | 323, 1586, 2336 |
| BseSI | GKGCMC | 2 cut(s) | 1585, 2812 |
| BseYI | CCCAGC | 1 cut(s) | 3114 |
| Bsh1236I | CGCG | 2 cut(s) | 15, 2031 |
| BshFI | GGCC | 3 cut(s) | 5, 1365, 3069 |
| BshNI | GGYRCC | 1 cut(s) | 379 |
| BsiHKAI | GWGCWC | 5 cut(s) | 84, 173, 1129, 1585, 1624 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2411 |
| BsiSI | CCGG | 4 cut(s) | 122, 162, 270, 1514 |
| BslFI | GGGAC | 1 cut(s) | 1490 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 294, 958, 2893 |
| BsmAI | GTCTC | 6 cut(s) | 132, 469, 500, 698, 1841, 2666 |
| BsmFI | GGGAC | 1 cut(s) | 1490 |
| BsmI | GAATGC | 2 cut(s) | 919, 2383 |
| BsnI | GGCC | 3 cut(s) | 5, 1365, 3069 |
| Bso31I | GGTCTC | 2 cut(s) | 132, 698 |
| BsoBI | CYCGRG | 1 cut(s) | 2411 |
| Bsp1286I | GDGCHC | 7 cut(s) | 84, 173, 1129, 1279, 1585, 1624, 2812 |
| Bsp13I | TCCGGA | 1 cut(s) | 161 |
| Bsp1407I | TGTACA | 2 cut(s) | 2005, 2050 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1062 |
| Bsp19I | CCATGG | 1 cut(s) | 725 |
| BspACI | CCGC | 2 cut(s) | 1785, 2536 |
| BspANI | GGCC | 3 cut(s) | 5, 1365, 3069 |
| BspEI | TCCGGA | 1 cut(s) | 161 |
| BspFNI | CGCG | 2 cut(s) | 15, 2031 |
| BspHI | TCATGA | 2 cut(s) | 1339, 1468 |
| BspLI | GGNNCC | 6 cut(s) | 160, 381, 1684, 2925, 3070, 3101 |
| BspPI | GGATC | 9 cut(s) | 153, 166, 521, 535, 1056, 2405, 2918, 2931, 3083 |
| BspQI | GCTCTTC | 1 cut(s) | 2304 |
| BspT107I | GGYRCC | 1 cut(s) | 379 |
| BspTI | CTTAAG | 1 cut(s) | 2621 |
| BspTNI | GGTCTC | 2 cut(s) | 132, 698 |
| BsrGI | TGTACA | 2 cut(s) | 2005, 2050 |
| BsrI | ACTGG | 7 cut(s) | 198, 234, 488, 1367, 1590, 1811, 1855 |
| BssECI | CCNNGG | 5 cut(s) | 122, 725, 1686, 3071, 3103 |
| BssSI | CACGAG | 1 cut(s) | 176 |
| BssT1I | CCWWGG | 2 cut(s) | 725, 1686 |
| Bst2BI | CACGAG | 1 cut(s) | 176 |
| Bst2UI | CCWGG | 6 cut(s) | 60, 2096, 2395, 2468, 3073, 3104 |
| Bst4CI | ACNGT | 7 cut(s) | 461, 953, 1337, 2045, 2104, 2991, 3035 |
| Bst6I | CTCTTC | 5 cut(s) | 498, 575, 1950, 2304, 2871 |
| BstAFI | CTTAAG | 1 cut(s) | 2621 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 641 |
| BstAUI | TGTACA | 2 cut(s) | 2005, 2050 |
| BstBAI | YACGTR | 1 cut(s) | 1124 |
| BstC8I | GCNNGC | 4 cut(s) | 594, 2540, 3043, 3087 |
| BstDSI | CCRYGG | 1 cut(s) | 725 |
| BstF5I | GGATG | 7 cut(s) | 266, 790, 2017, 2095, 2731, 2925, 2969 |
| BstFNI | CGCG | 2 cut(s) | 15, 2031 |
| BstH2I | RGCGCY | 2 cut(s) | 25, 2545 |
| BstHHI | GCGC | 5 cut(s) | 17, 24, 556, 2031, 2544 |
| BstMAI | GTCTC | 6 cut(s) | 132, 469, 500, 698, 1841, 2666 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 21, 562, 641, 1628, 2303 |
| BstNI | CCWGG | 6 cut(s) | 60, 2096, 2395, 2468, 3073, 3104 |
| BstNSI | RCATGY | 1 cut(s) | 3045 |
| BstSCI | CCNGG | 7 cut(s) | 58, 121, 2094, 2393, 2466, 3071, 3102 |
| BstSFI | CTRYAG | 2 cut(s) | 597, 1101 |
| BstSLI | GKGCMC | 2 cut(s) | 1585, 2812 |
| BstUI | CGCG | 2 cut(s) | 15, 2031 |
| BstV2I | GAAGAC | 2 cut(s) | 999, 2538 |
| BstX2I | RGATCY | 4 cut(s) | 158, 1048, 2923, 3022 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1616, 1882, 2822 |
| BstYI | RGATCY | 4 cut(s) | 158, 1048, 2923, 3022 |
| BsuI | GTATCC | 1 cut(s) | 2092 |
| BsuRI | GGCC | 3 cut(s) | 5, 1365, 3069 |
| BtgI | CCRYGG | 1 cut(s) | 725 |
| BtsCI | GGATG | 7 cut(s) | 266, 790, 2017, 2095, 2731, 2925, 2969 |
| BtsIMutI | CAGTG | 9 cut(s) | 191, 241, 1374, 1583, 1818, 1865, 2812, 2996, 3040 |
| Cac8I | GCNNGC | 4 cut(s) | 594, 2540, 3043, 3087 |
| CciI | TCATGA | 2 cut(s) | 1339, 1468 |
| CfoI | GCGC | 5 cut(s) | 17, 24, 556, 2031, 2544 |
| Cfr13I | GGNCC | 4 cut(s) | 149, 1364, 1683, 3068 |
| Csp6I | GTAC | 4 cut(s) | 491, 968, 2006, 2051 |
| CviQI | GTAC | 4 cut(s) | 491, 968, 2006, 2051 |
| DraI | TTTAAA | 3 cut(s) | 1197, 1521, 2202 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 5 cut(s) | 498, 575, 1950, 2304, 2871 |
| EarI | CTCTTC | 5 cut(s) | 498, 575, 1950, 2304, 2871 |
| Ecl136II | GAGCTC | 2 cut(s) | 82, 171 |
| Eco130I | CCWWGG | 2 cut(s) | 725, 1686 |
| Eco24I | GRGCYC | 3 cut(s) | 84, 173, 1279 |
| Eco31I | GGTCTC | 2 cut(s) | 132, 698 |
| Eco47I | GGWCC | 2 cut(s) | 149, 1683 |
| Eco53kI | GAGCTC | 2 cut(s) | 82, 171 |
| Eco57I | CTGAAG | 4 cut(s) | 1259, 1517, 1916, 1958 |
| Eco88I | CYCGRG | 1 cut(s) | 2411 |
| EcoICRI | GAGCTC | 2 cut(s) | 82, 171 |
| EcoRI | GAATTC | 2 cut(s) | 298, 1343 |
| EcoRII | CCWGG | 6 cut(s) | 58, 2094, 2393, 2466, 3071, 3102 |
| EcoT14I | CCWWGG | 2 cut(s) | 725, 1686 |
| EcoT38I | GRGCYC | 3 cut(s) | 84, 173, 1279 |
| ErhI | CCWWGG | 2 cut(s) | 725, 1686 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2283, 2315, 2574, 2606 |
| FaqI | GGGAC | 1 cut(s) | 1490 |
| FauNDI | CATATG | 1 cut(s) | 247 |
| FbaI | TGATCA | 2 cut(s) | 1696, 2746 |
| FblI | GTMKAC | 2 cut(s) | 894, 2179 |
| FokI | GGATG | 7 cut(s) | 253, 797, 2024, 2102, 2738, 2932, 2956 |
| FriOI | GRGCYC | 3 cut(s) | 84, 173, 1279 |
| FspBI | CTAG | 6 cut(s) | 500, 692, 965, 1067, 1650, 1776 |
| GlaI | GCGC | 5 cut(s) | 16, 23, 555, 2030, 2543 |
| GsaI | CCCAGC | 1 cut(s) | 3118 |
| GsuI | CTGGAG | 5 cut(s) | 471, 1731, 2388, 2844, 3118 |
| HaeII | RGCGCY | 2 cut(s) | 25, 2545 |
| HaeIII | GGCC | 3 cut(s) | 5, 1365, 3069 |
| HapII | CCGG | 4 cut(s) | 122, 162, 270, 1514 |
| HhaI | GCGC | 5 cut(s) | 17, 24, 556, 2031, 2544 |
| Hin6I | GCGC | 5 cut(s) | 15, 22, 554, 2029, 2542 |
| HinP1I | GCGC | 5 cut(s) | 15, 22, 554, 2029, 2542 |
| HincII | GTYRAC | 2 cut(s) | 430, 1022 |
| HindII | GTYRAC | 2 cut(s) | 430, 1022 |
| HpaII | CCGG | 4 cut(s) | 122, 162, 270, 1514 |
| HphI | GGTGA | 5 cut(s) | 53, 218, 536, 1205, 3119 |
| Hpy166II | GTNNAC | 6 cut(s) | 430, 895, 1022, 1265, 1583, 2180 |
| Hpy8I | GTNNAC | 6 cut(s) | 430, 895, 1022, 1265, 1583, 2180 |
| HpyAV | CCTTC | 9 cut(s) | 625, 742, 1177, 1234, 1630, 1696, 2055, 2326, 2410 |
| HpyCH4III | ACNGT | 7 cut(s) | 461, 953, 1337, 2045, 2104, 2991, 3035 |
| HpyCH4IV | ACGT | 2 cut(s) | 1123, 1819 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 21, 562, 641, 1628, 2303 |
| HpySE526I | ACGT | 2 cut(s) | 1123, 1819 |
| HspAI | GCGC | 5 cut(s) | 15, 22, 554, 2029, 2542 |
| Kpn2I | TCCGGA | 1 cut(s) | 161 |
| Ksp22I | TGATCA | 2 cut(s) | 1696, 2746 |
| LguI | GCTCTTC | 1 cut(s) | 2304 |
| LmnI | GCTCC | 9 cut(s) | 87, 242, 310, 1292, 1627, 1885, 2587, 2830, 3099 |
| LweI | GCATC | 8 cut(s) | 275, 775, 1300, 1599, 2236, 2323, 2421, 2978 |
| MaeI | CTAG | 6 cut(s) | 500, 692, 965, 1067, 1650, 1776 |
| MaeII | ACGT | 2 cut(s) | 1123, 1819 |
| MaeIII | GTNAC | 3 cut(s) | 216, 1863, 1900 |
| MfeI | CAATTG | 1 cut(s) | 2442 |
| MflI | RGATCY | 4 cut(s) | 158, 1048, 2923, 3022 |
| MhlI | GDGCHC | 7 cut(s) | 84, 173, 1129, 1279, 1585, 1624, 2812 |
| MlyI | GAGTC | 4 cut(s) | 1078, 1738, 1871, 2185 |
| MmeI | TCCRAC | 7 cut(s) | 220, 568, 780, 2374, 2550, 2663, 2663 |
| MroI | TCCGGA | 1 cut(s) | 161 |
| MroXI | GAANNNNTTC | 4 cut(s) | 405, 687, 1448, 1557 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1338, 2989 |
| MspCI | CTTAAG | 1 cut(s) | 2621 |
| MspI | CCGG | 4 cut(s) | 122, 162, 270, 1514 |
| MspR9I | CCNGG | 7 cut(s) | 60, 123, 2096, 2395, 2468, 3073, 3104 |
| MunI | CAATTG | 1 cut(s) | 2442 |
| Mva1269I | GAATGC | 2 cut(s) | 919, 2383 |
| MvaI | CCWGG | 6 cut(s) | 60, 2096, 2395, 2468, 3073, 3104 |
| MvnI | CGCG | 2 cut(s) | 15, 2031 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 21, 562, 641, 1628, 2303 |
| NciI | CCSGG | 1 cut(s) | 123 |
| NcoI | CCATGG | 1 cut(s) | 725 |
| NdeI | CATATG | 1 cut(s) | 247 |
| NlaIV | GGNNCC | 6 cut(s) | 160, 381, 1684, 2925, 3070, 3101 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 1 cut(s) | 1863 |
| NspI | RCATGY | 1 cut(s) | 3045 |
| OliI | CACNNNNGTG | 1 cut(s) | 2989 |
| PaeI | GCATGC | 1 cut(s) | 3045 |
| PaeR7I | CTCGAG | 1 cut(s) | 2411 |
| PagI | TCATGA | 2 cut(s) | 1339, 1468 |
| PciSI | GCTCTTC | 1 cut(s) | 2304 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1279 |
| PctI | GAATGC | 2 cut(s) | 919, 2383 |
| PdmI | GAANNNNTTC | 4 cut(s) | 405, 687, 1448, 1557 |
| PfeI | GAWTC | 9 cut(s) | 622, 875, 1013, 1029, 1168, 1463, 1753, 2072, 2151 |
| PflFI | GACNNNGTC | 2 cut(s) | 461, 1610 |
| PfoI | TCCNGGA | 1 cut(s) | 2466 |
| PleI | GAGTC | 4 cut(s) | 1078, 1738, 1870, 2184 |
| PpsI | GAGTC | 4 cut(s) | 1078, 1738, 1870, 2184 |
| Ppu21I | YACGTR | 1 cut(s) | 1124 |
| PsiI | TTATAA | 2 cut(s) | 1317, 2765 |
| Psp124BI | GAGCTC | 2 cut(s) | 84, 173 |
| Psp1406I | AACGTT | 1 cut(s) | 1819 |
| Psp6I | CCWGG | 6 cut(s) | 58, 2094, 2393, 2466, 3071, 3102 |
| PspFI | CCCAGC | 1 cut(s) | 3114 |
| PspGI | CCWGG | 6 cut(s) | 58, 2094, 2393, 2466, 3071, 3102 |
| PspN4I | GGNNCC | 6 cut(s) | 160, 381, 1684, 2925, 3070, 3101 |
| PspPI | GGNCC | 4 cut(s) | 149, 1364, 1683, 3068 |
| PsuI | RGATCY | 4 cut(s) | 158, 1048, 2923, 3022 |
| PsyI | GACNNNGTC | 2 cut(s) | 461, 1610 |
| RsaI | GTAC | 4 cut(s) | 492, 969, 2007, 2052 |
| RsaNI | GTAC | 4 cut(s) | 491, 968, 2006, 2051 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1338, 2989 |
| SacI | GAGCTC | 2 cut(s) | 84, 173 |
| SapI | GCTCTTC | 1 cut(s) | 2304 |
| Sau96I | GGNCC | 4 cut(s) | 149, 1364, 1683, 3068 |
| SchI | GAGTC | 4 cut(s) | 1078, 1738, 1871, 2185 |
| ScrFI | CCNGG | 7 cut(s) | 60, 123, 2096, 2395, 2468, 3073, 3104 |
| SduI | GDGCHC | 7 cut(s) | 84, 173, 1129, 1279, 1585, 1624, 2812 |
| SfaNI | GCATC | 8 cut(s) | 275, 775, 1300, 1599, 2236, 2323, 2421, 2978 |
| SfcI | CTRYAG | 2 cut(s) | 597, 1101 |
| Sfr274I | CTCGAG | 1 cut(s) | 2411 |
| SinI | GGWCC | 2 cut(s) | 149, 1683 |
| SlaI | CTCGAG | 1 cut(s) | 2411 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1338, 2989 |
| SmlI | CTYRAG | 9 cut(s) | 289, 997, 1376, 1458, 2318, 2411, 2426, 2481, 2621 |
| SmoI | CTYRAG | 9 cut(s) | 289, 997, 1376, 1458, 2318, 2411, 2426, 2481, 2621 |
| SphI | GCATGC | 1 cut(s) | 3045 |
| SsiI | CCGC | 2 cut(s) | 1785, 2536 |
| SspI | AATATT | 1 cut(s) | 2476 |
| SspMI | CTAG | 6 cut(s) | 500, 692, 965, 1067, 1650, 1776 |
| SstI | GAGCTC | 2 cut(s) | 84, 173 |
| StyD4I | CCNGG | 7 cut(s) | 58, 121, 2094, 2393, 2466, 3071, 3102 |
| StyI | CCWWGG | 2 cut(s) | 725, 1686 |
| TaaI | ACNGT | 7 cut(s) | 461, 953, 1337, 2045, 2104, 2991, 3035 |
| TaiI | ACGT | 2 cut(s) | 1126, 1822 |
| TaqI | TCGA | 1 cut(s) | 2412 |
| TaqII | GACCGA | 1 cut(s) | 2163 |
| TatI | WGTACW | 4 cut(s) | 490, 967, 2005, 2050 |
| TfiI | GAWTC | 9 cut(s) | 622, 875, 1013, 1029, 1168, 1463, 1753, 2072, 2151 |
| TscAI | CASTG | 9 cut(s) | 198, 241, 1374, 1590, 1818, 1872, 2812, 2996, 3040 |
| TseFI | GTSAC | 1 cut(s) | 1863 |
| Tsp45I | GTSAC | 1 cut(s) | 1863 |
| TspGWI | ACGGA | 1 cut(s) | 662 |
| TspRI | CASTG | 9 cut(s) | 198, 241, 1374, 1590, 1818, 1872, 2812, 2996, 3040 |
| Tth111I | GACNNNGTC | 2 cut(s) | 461, 1610 |
| Vha464I | CTTAAG | 1 cut(s) | 2621 |
| VneI | GTGCAC | 1 cut(s) | 1581 |
| VpaK11BI | GGWCC | 2 cut(s) | 149, 1683 |
| XapI | RAATTY | 6 cut(s) | 298, 933, 1285, 1343, 1563, 2774 |
| XbaI | TCTAGA | 2 cut(s) | 499, 1775 |
| XceI | RCATGY | 1 cut(s) | 3045 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2819, 3093 |
| XhoI | CTCGAG | 1 cut(s) | 2411 |
| XmiI | GTMKAC | 2 cut(s) | 894, 2179 |
| XmnI | GAANNNNTTC | 4 cut(s) | 405, 687, 1448, 1557 |
| XspI | CTAG | 6 cut(s) | 500, 692, 965, 1067, 1650, 1776 |