Structural maintenance of chromosomes protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15920 |
| fragaria_vesca | FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 FvH4_7g01640 |
| malus_domestica | MD07G1021900.v1.1 |
| prunus_persica | Prupe.2G022000_v2.0.a1 Prupe.2G022000_v2.0.a1 |
| pyrus_communis | pycom07g01660 |
| rosa_chinensis | RchiOBHm_Chr1g0317911 |
| rosa_laevigata | RLG00000029591 RLG00000030577 |
| rosa_multiflora | Rmu_co8249473.1_g000001 Rmu_sc0000654.1_g000055 Rmu_sc0002922.1_g000001 Rmu_ssc0000008.1_g000048 |
| rosa_roxburghii | Rroxscaffold_4G00330130 |
| rosa_rugosa | Rorug01G0018500 Rorug01G0018600 |
| rosa_samantha | Rh1AG030100 Rh1BG026200 Rh1CG028700 Rh1DG041400 |
| rosa_wichuraiana | Rw1G002270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1350, 2795 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1517 |
| Acc36I | ACCTGC | 1 cut(s) | 3124 |
| AccB1I | GGYRCC | 1 cut(s) | 379 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1168, 2728 |
| AccBSI | CCGCTC | 1 cut(s) | 2996 |
| AccI | GTMKAC | 2 cut(s) | 1576, 2209 |
| AccII | CGCG | 1 cut(s) | 1256 |
| AciI | CCGC | 5 cut(s) | 212, 256, 1440, 2117, 2996 |
| AcoI | YGGCCR | 2 cut(s) | 3, 1681 |
| AcsI | RAATTY | 3 cut(s) | 816, 965, 1376 |
| AcuI | CTGAAG | 7 cut(s) | 1292, 1946, 2114, 2327, 2426, 2658, 2672 |
| AfaI | GTAC | 3 cut(s) | 365, 996, 1002 |
| AfeI | AGCGCT | 1 cut(s) | 2180 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 12, 129, 991, 1168, 1755, 2728, 2923 |
| AflII | CTTAAG | 2 cut(s) | 1066, 2201 |
| AflIII | ACRYGT | 2 cut(s) | 1254, 2155 |
| AjiI | CACGTC | 2 cut(s) | 2060, 2125 |
| AjnI | CCWGG | 1 cut(s) | 2481 |
| AleI | CACNNNNGTG | 1 cut(s) | 3019 |
| Alw21I | GWGCWC | 5 cut(s) | 173, 1330, 1615, 2763, 2842 |
| Alw26I | GTCTC | 6 cut(s) | 257, 500, 698, 1503, 2696, 2875 |
| Alw44I | GTGCAC | 1 cut(s) | 1611 |
| Ama87I | CYCGRG | 2 cut(s) | 12, 1409 |
| Aor51HI | AGCGCT | 1 cut(s) | 2180 |
| AoxI | GGCC | 6 cut(s) | 3, 15, 1200, 1396, 1681, 3097 |
| ApaI | GGGCCC | 1 cut(s) | 1204 |
| ApaLI | GTGCAC | 1 cut(s) | 1611 |
| ApeKI | GCWGC | 9 cut(s) | 214, 217, 809, 873, 1088, 1091, 2311, 2396, 2489 |
| ApoI | RAATTY | 3 cut(s) | 816, 965, 1376 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1628, 1660 |
| AseI | ATTAAT | 1 cut(s) | 939 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 405, 687, 1481, 1587 |
| AspLEI | GCGC | 4 cut(s) | 24, 960, 2181, 2329 |
| AspS9I | GGNCC | 7 cut(s) | 15, 149, 1200, 1201, 1397, 1636, 3098 |
| AsuC2I | CCSGG | 3 cut(s) | 60, 123, 1630 |
| AsuHPI | GGTGA | 5 cut(s) | 53, 218, 536, 2834, 3149 |
| AvaI | CYCGRG | 2 cut(s) | 12, 1409 |
| AvaII | GGWCC | 2 cut(s) | 149, 1636 |
| BaeGI | GKGCMC | 2 cut(s) | 1204, 1615 |
| BalI | TGGCCA | 1 cut(s) | 1683 |
| BamHI | GGATCC | 2 cut(s) | 1712, 2953 |
| BanI | GGYRCC | 1 cut(s) | 379 |
| BanII | GRGCYC | 2 cut(s) | 173, 1204 |
| BauI | CACGAG | 2 cut(s) | 176, 1500 |
| BbsI | GAAGAC | 4 cut(s) | 987, 1032, 2059, 2484 |
| Bbv12I | GWGCWC | 5 cut(s) | 173, 1330, 1615, 2763, 2842 |
| BbvI | GCAGC | 9 cut(s) | 204, 226, 796, 860, 1075, 1078, 2323, 2383, 2476 |
| BccI | CCATC | 5 cut(s) | 1273, 2722, 2853, 2944, 3151 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3098, 3132 |
| BciT130I | CCWGG | 1 cut(s) | 2483 |
| BciVI | GTATCC | 2 cut(s) | 1870, 2122 |
| BclI | TGATCA | 3 cut(s) | 1726, 2427, 2776 |
| BcnI | CCSGG | 3 cut(s) | 60, 123, 1630 |
| BcoDI | GTCTC | 6 cut(s) | 257, 500, 698, 1503, 2696, 2875 |
| BfaI | CTAG | 7 cut(s) | 200, 500, 1085, 1175, 1742, 1806, 3056 |
| BfmI | CTRYAG | 4 cut(s) | 519, 874, 2493, 3117 |
| BfoI | RGCGCY | 2 cut(s) | 25, 2182 |
| BfrI | CTTAAG | 2 cut(s) | 1066, 2201 |
| BfuAI | ACCTGC | 1 cut(s) | 3124 |
| BfuI | GTATCC | 2 cut(s) | 1870, 2122 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1689 |
| BglII | AGATCT | 2 cut(s) | 2902, 3052 |
| Bme1390I | CCNGG | 4 cut(s) | 60, 123, 1630, 2483 |
| Bme18I | GGWCC | 2 cut(s) | 149, 1636 |
| BmeT110I | CYCGRG | 2 cut(s) | 12, 1409 |
| BmgBI | CACGTC | 2 cut(s) | 2060, 2125 |
| BmgT120I | GGNCC | 7 cut(s) | 15, 149, 1200, 1201, 1397, 1636, 3098 |
| BmiI | GGNNCC | 5 cut(s) | 381, 1202, 1714, 2666, 2955 |
| BmrFI | CCNGG | 4 cut(s) | 60, 123, 1630, 2483 |
| BmrI | ACTGGG | 4 cut(s) | 203, 878, 1625, 3013 |
| BmsI | GCATC | 8 cut(s) | 328, 556, 796, 1253, 1639, 2266, 2451, 3008 |
| BmuI | ACTGGG | 4 cut(s) | 203, 878, 1625, 3013 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1431 |
| BpiI | GAAGAC | 4 cut(s) | 987, 1032, 2059, 2484 |
| BpmI | CTGGAG | 6 cut(s) | 471, 1761, 1902, 2418, 2504, 2874 |
| Bpu10I | CCTNAGC | 1 cut(s) | 768 |
| BpuEI | CTTGAG | 6 cut(s) | 1015, 1127, 1476, 1514, 2477, 2496 |
| BpuMI | CCSGG | 3 cut(s) | 60, 123, 1630 |
| BsaAI | YACGTR | 1 cut(s) | 344 |
| BsaI | GGTCTC | 3 cut(s) | 698, 1503, 2875 |
| BsaJI | CCNNGG | 5 cut(s) | 11, 725, 1134, 1599, 3101 |
| BsaWI | WCCGGW | 1 cut(s) | 1322 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 234, 264, 3121, 3151 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 12, 129, 991, 1168, 1755, 2728, 2923 |
| Bse3DI | GCAATG | 1 cut(s) | 2418 |
| BseBI | CCWGG | 1 cut(s) | 2483 |
| BseDI | CCNNGG | 5 cut(s) | 11, 725, 1134, 1599, 3101 |
| BseGI | GGATG | 8 cut(s) | 808, 1144, 1244, 1362, 1993, 2125, 2761, 2955 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 12, 129, 991, 1168, 1755, 2728, 2923 |
| BseMI | GCAATG | 1 cut(s) | 2418 |
| BseMII | CTCAG | 4 cut(s) | 63, 693, 2403, 2705 |
| BseRI | GAGGAG | 2 cut(s) | 1616, 2033 |
| BseSI | GKGCMC | 2 cut(s) | 1204, 1615 |
| BseXI | GCAGC | 9 cut(s) | 204, 226, 796, 860, 1075, 1078, 2323, 2383, 2476 |
| BseYI | CCCAGC | 1 cut(s) | 1716 |
| BsgI | GTGCAG | 1 cut(s) | 1110 |
| Bsh1236I | CGCG | 1 cut(s) | 1256 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1429 |
| BshFI | GGCC | 6 cut(s) | 5, 17, 1202, 1398, 1683, 3099 |
| BshNI | GGYRCC | 1 cut(s) | 379 |
| BsiEI | CGRYCG | 1 cut(s) | 1429 |
| BsiHKAI | GWGCWC | 5 cut(s) | 173, 1330, 1615, 2763, 2842 |
| BsiHKCI | CYCGRG | 2 cut(s) | 12, 1409 |
| BsiSI | CCGG | 4 cut(s) | 59, 123, 1323, 1630 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 12, 129, 991, 1168, 1755, 2728, 2923 |
| BsmAI | GTCTC | 6 cut(s) | 257, 500, 698, 1503, 2696, 2875 |
| BsmI | GAATGC | 1 cut(s) | 952 |
| BsnI | GGCC | 6 cut(s) | 5, 17, 1202, 1398, 1683, 3099 |
| Bso31I | GGTCTC | 3 cut(s) | 698, 1503, 2875 |
| BsoBI | CYCGRG | 2 cut(s) | 12, 1409 |
| Bsp120I | GGGCCC | 1 cut(s) | 1200 |
| Bsp1286I | GDGCHC | 6 cut(s) | 173, 1204, 1330, 1615, 2763, 2842 |
| Bsp1407I | TGTACA | 1 cut(s) | 363 |
| BspACI | CCGC | 5 cut(s) | 212, 256, 1440, 2117, 2996 |
| BspANI | GGCC | 6 cut(s) | 5, 17, 1202, 1398, 1683, 3099 |
| BspCNI | CTCAG | 4 cut(s) | 64, 694, 2404, 2704 |
| BspFNI | CGCG | 1 cut(s) | 1256 |
| BspLI | GGNNCC | 5 cut(s) | 381, 1202, 1714, 2666, 2955 |
| BspMAI | CTGCAG | 2 cut(s) | 878, 3121 |
| BspMI | ACCTGC | 1 cut(s) | 3124 |
| BspT107I | GGYRCC | 1 cut(s) | 379 |
| BspTI | CTTAAG | 2 cut(s) | 1066, 2201 |
| BspTNI | GGTCTC | 3 cut(s) | 698, 1503, 2875 |
| BsrBI | CCGCTC | 1 cut(s) | 2996 |
| BsrDI | GCAATG | 1 cut(s) | 2418 |
| BsrGI | TGTACA | 1 cut(s) | 363 |
| BssECI | CCNNGG | 5 cut(s) | 11, 725, 1134, 1599, 3101 |
| BssSI | CACGAG | 2 cut(s) | 176, 1500 |
| BssT1I | CCWWGG | 2 cut(s) | 725, 3101 |
| Bst2BI | CACGAG | 2 cut(s) | 176, 1500 |
| Bst2UI | CCWGG | 1 cut(s) | 2483 |
| Bst4CI | ACNGT | 4 cut(s) | 461, 986, 1430, 3065 |
| Bst6I | CTCTTC | 5 cut(s) | 303, 498, 575, 2042, 2901 |
| BstAFI | CTTAAG | 2 cut(s) | 1066, 2201 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 641 |
| BstAUI | TGTACA | 1 cut(s) | 363 |
| BstBAI | YACGTR | 1 cut(s) | 344 |
| BstC8I | GCNNGC | 6 cut(s) | 594, 952, 956, 1258, 1262, 3073 |
| BstDEI | CTNAG | 8 cut(s) | 72, 384, 702, 768, 1693, 2412, 2691, 2834 |
| BstDSI | CCRYGG | 1 cut(s) | 1134 |
| BstF5I | GGATG | 8 cut(s) | 808, 1144, 1244, 1362, 1993, 2125, 2761, 2955 |
| BstFNI | CGCG | 1 cut(s) | 1256 |
| BstH2I | RGCGCY | 2 cut(s) | 25, 2182 |
| BstHHI | GCGC | 4 cut(s) | 24, 960, 2181, 2329 |
| BstMAI | GTCTC | 6 cut(s) | 257, 500, 698, 1503, 2696, 2875 |
| BstMCI | CGRYCG | 1 cut(s) | 1429 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 217, 544, 641, 1199, 1658, 1689, 2333, 2513 |
| BstNI | CCWGG | 1 cut(s) | 2483 |
| BstNSI | RCATGY | 2 cut(s) | 2159, 3075 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1431 |
| BstSCI | CCNGG | 4 cut(s) | 58, 121, 1628, 2481 |
| BstSFI | CTRYAG | 4 cut(s) | 519, 874, 2493, 3117 |
| BstSLI | GKGCMC | 2 cut(s) | 1204, 1615 |
| BstUI | CGCG | 1 cut(s) | 1256 |
| BstV1I | GCAGC | 9 cut(s) | 204, 226, 796, 860, 1075, 1078, 2323, 2383, 2476 |
| BstV2I | GAAGAC | 4 cut(s) | 987, 1032, 2059, 2484 |
| BstX2I | RGATCY | 8 cut(s) | 125, 158, 1081, 1620, 1712, 2902, 2953, 3052 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2852 |
| BstYI | RGATCY | 8 cut(s) | 125, 158, 1081, 1620, 1712, 2902, 2953, 3052 |
| BsuI | GTATCC | 2 cut(s) | 1870, 2122 |
| BsuRI | GGCC | 6 cut(s) | 5, 17, 1202, 1398, 1683, 3099 |
| BtgI | CCRYGG | 1 cut(s) | 1134 |
| BtrI | CACGTC | 2 cut(s) | 2060, 2125 |
| BtsCI | GGATG | 8 cut(s) | 808, 1144, 1244, 1362, 1993, 2125, 2761, 2955 |
| BtsI | GCAGTG | 2 cut(s) | 1127, 3139 |
| BtsIMutI | CAGTG | 9 cut(s) | 191, 241, 495, 1127, 1613, 1848, 3026, 3070, 3139 |
| BveI | ACCTGC | 1 cut(s) | 3124 |
| Cac8I | GCNNGC | 6 cut(s) | 594, 952, 956, 1258, 1262, 3073 |
| CfoI | GCGC | 4 cut(s) | 24, 960, 2181, 2329 |
| Cfr13I | GGNCC | 7 cut(s) | 15, 149, 1200, 1201, 1397, 1636, 3098 |
| Csp6I | GTAC | 3 cut(s) | 364, 995, 1001 |
| CviQI | GTAC | 3 cut(s) | 364, 995, 1001 |
| DdeI | CTNAG | 8 cut(s) | 72, 384, 702, 768, 1693, 2412, 2691, 2834 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1517 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1517 |
| EaeI | YGGCCR | 2 cut(s) | 3, 1681 |
| Eam1104I | CTCTTC | 5 cut(s) | 303, 498, 575, 2042, 2901 |
| EarI | CTCTTC | 5 cut(s) | 303, 498, 575, 2042, 2901 |
| EciI | GGCGGA | 1 cut(s) | 2132 |
| Ecl136II | GAGCTC | 1 cut(s) | 171 |
| Eco130I | CCWWGG | 2 cut(s) | 725, 3101 |
| Eco24I | GRGCYC | 2 cut(s) | 173, 1204 |
| Eco31I | GGTCTC | 3 cut(s) | 698, 1503, 2875 |
| Eco47I | GGWCC | 2 cut(s) | 149, 1636 |
| Eco47III | AGCGCT | 1 cut(s) | 2180 |
| Eco53kI | GAGCTC | 1 cut(s) | 171 |
| Eco57I | CTGAAG | 7 cut(s) | 1292, 1946, 2114, 2327, 2426, 2658, 2672 |
| Eco88I | CYCGRG | 2 cut(s) | 12, 1409 |
| EcoICRI | GAGCTC | 1 cut(s) | 171 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1200 |
| EcoRI | GAATTC | 2 cut(s) | 816, 1376 |
| EcoRII | CCWGG | 1 cut(s) | 2481 |
| EcoT14I | CCWWGG | 2 cut(s) | 725, 3101 |
| EcoT38I | GRGCYC | 2 cut(s) | 173, 1204 |
| ErhI | CCWWGG | 2 cut(s) | 725, 3101 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 675, 707, 1232, 1264, 1986, 2018, 2325, 2357 |
| FauI | CCCGC | 1 cut(s) | 249 |
| FauNDI | CATATG | 2 cut(s) | 247, 902 |
| FbaI | TGATCA | 3 cut(s) | 1726, 2427, 2776 |
| FblI | GTMKAC | 2 cut(s) | 1576, 2209 |
| FokI | GGATG | 8 cut(s) | 815, 1151, 1231, 1369, 2000, 2132, 2768, 2962 |
| FriOI | GRGCYC | 2 cut(s) | 173, 1204 |
| FspBI | CTAG | 7 cut(s) | 200, 500, 1085, 1175, 1742, 1806, 3056 |
| GlaI | GCGC | 4 cut(s) | 23, 959, 2180, 2328 |
| GsaI | CCCAGC | 1 cut(s) | 1720 |
| GsuI | CTGGAG | 6 cut(s) | 471, 1761, 1902, 2418, 2504, 2874 |
| HaeII | RGCGCY | 2 cut(s) | 25, 2182 |
| HaeIII | GGCC | 6 cut(s) | 5, 17, 1202, 1398, 1683, 3099 |
| HapII | CCGG | 4 cut(s) | 59, 123, 1323, 1630 |
| HhaI | GCGC | 4 cut(s) | 24, 960, 2181, 2329 |
| Hin6I | GCGC | 4 cut(s) | 22, 958, 2179, 2327 |
| HinP1I | GCGC | 4 cut(s) | 22, 958, 2179, 2327 |
| HincII | GTYRAC | 2 cut(s) | 430, 1577 |
| HindII | GTYRAC | 2 cut(s) | 430, 1577 |
| HindIII | AAGCTT | 1 cut(s) | 1344 |
| HpaII | CCGG | 4 cut(s) | 59, 123, 1323, 1630 |
| HphI | GGTGA | 5 cut(s) | 53, 218, 536, 2834, 3149 |
| Hpy166II | GTNNAC | 7 cut(s) | 430, 554, 920, 1298, 1577, 1613, 2210 |
| Hpy8I | GTNNAC | 7 cut(s) | 430, 554, 920, 1298, 1577, 1613, 2210 |
| Hpy99I | CGWCG | 2 cut(s) | 1434, 2061 |
| HpyAV | CCTTC | 9 cut(s) | 769, 1131, 1210, 1234, 1267, 1445, 2107, 2351, 2647 |
| HpyCH4III | ACNGT | 4 cut(s) | 461, 986, 1430, 3065 |
| HpyCH4IV | ACGT | 5 cut(s) | 287, 343, 2059, 2074, 2124 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 217, 544, 641, 1199, 1658, 1689, 2333, 2513 |
| HpyF3I | CTNAG | 8 cut(s) | 72, 384, 702, 768, 1693, 2412, 2691, 2834 |
| HpySE526I | ACGT | 5 cut(s) | 287, 343, 2059, 2074, 2124 |
| HspAI | GCGC | 4 cut(s) | 22, 958, 2179, 2327 |
| Ksp22I | TGATCA | 3 cut(s) | 1726, 2427, 2776 |
| LmnI | GCTCC | 8 cut(s) | 176, 242, 1171, 1325, 1657, 2670, 2860, 3129 |
| Lsp1109I | GCAGC | 9 cut(s) | 204, 226, 796, 860, 1075, 1078, 2323, 2383, 2476 |
| LweI | GCATC | 8 cut(s) | 328, 556, 796, 1253, 1639, 2266, 2451, 3008 |
| MaeI | CTAG | 7 cut(s) | 200, 500, 1085, 1175, 1742, 1806, 3056 |
| MaeII | ACGT | 5 cut(s) | 287, 343, 2059, 2074, 2124 |
| MaeIII | GTNAC | 3 cut(s) | 344, 394, 1976 |
| MbiI | CCGCTC | 1 cut(s) | 2996 |
| MfeI | CAATTG | 1 cut(s) | 2472 |
| MflI | RGATCY | 8 cut(s) | 125, 158, 1081, 1620, 1712, 2902, 2953, 3052 |
| MhlI | GDGCHC | 6 cut(s) | 173, 1204, 1330, 1615, 2763, 2842 |
| MlsI | TGGCCA | 1 cut(s) | 1683 |
| MluI | ACGCGT | 1 cut(s) | 1254 |
| MluNI | TGGCCA | 1 cut(s) | 1683 |
| MlyI | GAGTC | 5 cut(s) | 917, 1022, 1768, 1984, 2423 |
| MmeI | TCCRAC | 4 cut(s) | 220, 780, 1449, 2693 |
| Mox20I | TGGCCA | 1 cut(s) | 1683 |
| MroXI | GAANNNNTTC | 4 cut(s) | 405, 687, 1481, 1587 |
| MscI | TGGCCA | 1 cut(s) | 1683 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1371, 2423, 3019 |
| Msp20I | TGGCCA | 1 cut(s) | 1683 |
| MspA1I | CMGCKG | 1 cut(s) | 217 |
| MspCI | CTTAAG | 2 cut(s) | 1066, 2201 |
| MspI | CCGG | 4 cut(s) | 59, 123, 1323, 1630 |
| MspR9I | CCNGG | 4 cut(s) | 60, 123, 1630, 2483 |
| MunI | CAATTG | 1 cut(s) | 2472 |
| Mva1269I | GAATGC | 1 cut(s) | 952 |
| MvaI | CCWGG | 1 cut(s) | 2483 |
| MvnI | CGCG | 1 cut(s) | 1256 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 217, 544, 641, 1199, 1658, 1689, 2333, 2513 |
| NciI | CCSGG | 3 cut(s) | 60, 123, 1630 |
| NdeI | CATATG | 2 cut(s) | 247, 902 |
| NlaIV | GGNNCC | 5 cut(s) | 381, 1202, 1714, 2666, 2955 |
| NmeAIII | GCCGAG | 2 cut(s) | 31, 109 |
| NmuCI | GTSAC | 1 cut(s) | 1976 |
| NspI | RCATGY | 2 cut(s) | 2159, 3075 |
| OliI | CACNNNNGTG | 1 cut(s) | 3019 |
| PaeI | GCATGC | 1 cut(s) | 3075 |
| PaeR7I | CTCGAG | 1 cut(s) | 1409 |
| PciI | ACATGT | 1 cut(s) | 2155 |
| PctI | GAATGC | 1 cut(s) | 952 |
| PdmI | GAANNNNTTC | 4 cut(s) | 405, 687, 1481, 1587 |
| PfeI | GAWTC | 6 cut(s) | 622, 1046, 1111, 1496, 1783, 1925 |
| PflFI | GACNNNGTC | 1 cut(s) | 461 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1168, 2728 |
| PleI | GAGTC | 5 cut(s) | 916, 1022, 1768, 1983, 2422 |
| PpsI | GAGTC | 5 cut(s) | 916, 1022, 1768, 1983, 2422 |
| Ppu21I | YACGTR | 1 cut(s) | 344 |
| PscI | ACATGT | 1 cut(s) | 2155 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1431 |
| PshBI | ATTAAT | 1 cut(s) | 939 |
| PsiI | TTATAA | 2 cut(s) | 1350, 2795 |
| Psp124BI | GAGCTC | 1 cut(s) | 173 |
| Psp6I | CCWGG | 1 cut(s) | 2481 |
| PspFI | CCCAGC | 1 cut(s) | 1716 |
| PspGI | CCWGG | 1 cut(s) | 2481 |
| PspN4I | GGNNCC | 5 cut(s) | 381, 1202, 1714, 2666, 2955 |
| PspOMI | GGGCCC | 1 cut(s) | 1200 |
| PspPI | GGNCC | 7 cut(s) | 15, 149, 1200, 1201, 1397, 1636, 3098 |
| PspXI | VCTCGAGB | 1 cut(s) | 1409 |
| PstI | CTGCAG | 2 cut(s) | 878, 3121 |
| PsuI | RGATCY | 8 cut(s) | 125, 158, 1081, 1620, 1712, 2902, 2953, 3052 |
| PsyI | GACNNNGTC | 1 cut(s) | 461 |
| PvuII | CAGCTG | 1 cut(s) | 217 |
| RsaI | GTAC | 3 cut(s) | 365, 996, 1002 |
| RsaNI | GTAC | 3 cut(s) | 364, 995, 1001 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1371, 2423, 3019 |
| SacI | GAGCTC | 1 cut(s) | 173 |
| SalI | GTCGAC | 1 cut(s) | 1575 |
| Sau96I | GGNCC | 7 cut(s) | 15, 149, 1200, 1201, 1397, 1636, 3098 |
| SchI | GAGTC | 5 cut(s) | 917, 1022, 1768, 1984, 2423 |
| ScrFI | CCNGG | 4 cut(s) | 60, 123, 1630, 2483 |
| SduI | GDGCHC | 6 cut(s) | 173, 1204, 1330, 1615, 2763, 2842 |
| SfaNI | GCATC | 8 cut(s) | 328, 556, 796, 1253, 1639, 2266, 2451, 3008 |
| SfcI | CTRYAG | 4 cut(s) | 519, 874, 2493, 3117 |
| Sfr274I | CTCGAG | 1 cut(s) | 1409 |
| SinI | GGWCC | 2 cut(s) | 149, 1636 |
| SlaI | CTCGAG | 1 cut(s) | 1409 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1371, 2423, 3019 |
| SmlI | CTYRAG | 9 cut(s) | 1030, 1066, 1106, 1409, 1491, 1529, 2201, 2456, 2511 |
| SmoI | CTYRAG | 9 cut(s) | 1030, 1066, 1106, 1409, 1491, 1529, 2201, 2456, 2511 |
| SphI | GCATGC | 1 cut(s) | 3075 |
| SsiI | CCGC | 5 cut(s) | 212, 256, 1440, 2117, 2996 |
| SspI | AATATT | 2 cut(s) | 316, 2173 |
| SspMI | CTAG | 7 cut(s) | 200, 500, 1085, 1175, 1742, 1806, 3056 |
| SstI | GAGCTC | 1 cut(s) | 173 |
| StyD4I | CCNGG | 4 cut(s) | 58, 121, 1628, 2481 |
| StyI | CCWWGG | 2 cut(s) | 725, 3101 |
| TaaI | ACNGT | 4 cut(s) | 461, 986, 1430, 3065 |
| TaiI | ACGT | 5 cut(s) | 290, 346, 2062, 2077, 2127 |
| TaqI | TCGA | 7 cut(s) | 911, 1369, 1410, 1507, 1576, 1890, 3108 |
| TaqII | GACCGA | 2 cut(s) | 166, 2857 |
| TatI | WGTACW | 2 cut(s) | 363, 1000 |
| TauI | GCSGC | 3 cut(s) | 214, 1442, 2999 |
| TfiI | GAWTC | 6 cut(s) | 622, 1046, 1111, 1496, 1783, 1925 |
| TscAI | CASTG | 9 cut(s) | 198, 241, 495, 1134, 1620, 1848, 3026, 3070, 3139 |
| TseFI | GTSAC | 1 cut(s) | 1976 |
| TseI | GCWGC | 9 cut(s) | 214, 217, 809, 873, 1088, 1091, 2311, 2396, 2489 |
| Tsp45I | GTSAC | 1 cut(s) | 1976 |
| TspGWI | ACGGA | 5 cut(s) | 624, 662, 1151, 2026, 2101 |
| TspRI | CASTG | 9 cut(s) | 198, 241, 495, 1134, 1620, 1848, 3026, 3070, 3139 |
| Tth111I | GACNNNGTC | 1 cut(s) | 461 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1168, 2728 |
| Vha464I | CTTAAG | 2 cut(s) | 1066, 2201 |
| VneI | GTGCAC | 1 cut(s) | 1611 |
| VpaK11BI | GGWCC | 2 cut(s) | 149, 1636 |
| VspI | ATTAAT | 1 cut(s) | 939 |
| XapI | RAATTY | 3 cut(s) | 816, 965, 1376 |
| XbaI | TCTAGA | 2 cut(s) | 1805, 3055 |
| XceI | RCATGY | 2 cut(s) | 2159, 3075 |
| XhoI | CTCGAG | 1 cut(s) | 1409 |
| XmiI | GTMKAC | 2 cut(s) | 1576, 2209 |
| XmnI | GAANNNNTTC | 4 cut(s) | 405, 687, 1481, 1587 |
| XspI | CTAG | 7 cut(s) | 200, 500, 1085, 1175, 1742, 1806, 3056 |