Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004084

Physical Location & Seq

Genomic Coordinates Forward (+)

5509625 .. 5511322

Gene Structure 1698 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G16760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 960 bp

ATGTCAGATTCAATCCAGGAAAGATACTTAGTTGGATACGCACTCGCAGCCAAGAAACAGCATAGTTTCATCCAACCTTCTTTGATCGAACACTCAAGGCAACGAGGCATTGATCTGGTCAAGCTTGATCCGACGAAATCGTTGTTGGAGCAAGGGAAGCTTGATTGCATAATCCACAAGCTTTACGATGTGTATTGGAAGGAGAATCTTCATGAGTTTCGCGAGAAATGTCCTGGTGTTCCTGTAATCGATTTGCCTGAGGCTATCGAGCGATTGCACAATAGGGTTTCGATGCTTGAGGTGATAACTCAATTGAGGTTTCCTGTTTCAGATAGCGAGAGATTTGGTGTCCCGGAGCAAGTTGTTGTTATGGATTCGAGCGTCTTGAGCGGTGGAGGAGCTTTAGGGGAGCTTAAGTTTCCGGTGATTGCTAAGCCGTTGGATGCTGATGGGAGTGCTAAATCTCATAAGATGTTTTTGATTTATGATCAAGAAGGGATGAAGATTTTGAAAGCTCCTATTGTGTTGCAGGAGTTTGTGAATCATGGTGGTGTGATCTTTAAGGTCTATGTGGTTGGAGATCATGTCAAATGTGTAAAGAGAAGATCTTTACCTGATATCTCTGAAGAGAAGATTGGGACGTCGAAAGGGTCTCTTCCGTTTTCGCAGATATCGAATCTGACTGCTCAAGAGGACAAGAACATTGAGTATGGTGAGGATAGGAGCTTAGAGAAAGTGGAAATGCCTCCGTTAAGTTTCTTGACAGATCTAGCAAAGGCCATGAGGGAATCAATGGGACTCAATCTCTTTAACTTCGACGTGATTAGGGATGCCAAAGATGCTAATAGGTACCTTATAATTGATATTAACTACTTTCCTGGATATGCTAAGATGCCCTCTTACGAGCCTGTGTTGACTGAGTTCTTCTGGGACATGGTCACTAAGAAGAATCATGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0006020 GO:0006066 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010264 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0019637 GO:0019751 GO:0032958 GO:0033517 GO:0043647 GO:0044237 GO:0044238 GO:0044262 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046165 GO:0046173 GO:0046835 GO:0051766 GO:0052725 GO:0052726 GO:0052746 GO:0071704 GO:0090407 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Ins134_P3_kin

Protein Analysis

319

Amino Acids

36.22

Weight (kDa)

6.03

Isoelectric Point (pI)

51.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ins134_P3_kin_N	PF17927	10 - 89	2.5e-40	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
Ins134_P3_kin	PF05770	110 - 311	1.7e-95	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004084)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16760
fragaria_vesca	FvH4_5g22490 FvH4_7g34131
malus_domestica	MD01G1237400.v1.1 MD03G1144600.v1.1 MD06G1037200.v1.1 MD07G1309900.v1.1 MD16G1271300.v1.1
prunus_persica	Prupe.2G327800_v2.0.a1 Prupe.5G031800_v2.0.a1
pyrus_communis	pycom06g03060 pycom07g28190 pycom16g24080
rosa_chinensis	RchiOBHm_Chr1g0384451 RchiOBHm_Chr7g0210271
rosa_laevigata	RLG00000003053 RLG00000026039
rosa_multiflora	Rmu_co8221066.1_g000001 Rmu_sc0017046.1_g000001
rosa_roxburghii	Rroxscaffold_3G00248470 Rroxscaffold_4G00276690
rosa_rugosa	Rorug01G0447800 Rorug07G0120400
rosa_samantha	Rh1AG473100 Rh1BG431100 Rh1CG444200 Rh1DG463600 Rh7AG253200 Rh7BG248200 Rh7CG270100 Rh7DG260700
rosa_wichuraiana	Rw1G039950 Rw7G021580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	857
AatII	GACGTC	1 cut(s)	644
Acc65I	GGTACC	1 cut(s)	849
AccB1I	GGYRCC	1 cut(s)	849
AccBSI	CCGCTC	1 cut(s)	390
AccII	CGCG	1 cut(s)	222
AciI	CCGC	1 cut(s)	390
AclWI	GGATC	1 cut(s)	122
AcuI	CTGAAG	1 cut(s)	645
AcyI	GRCGYC	1 cut(s)	641
AfaI	GTAC	1 cut(s)	851
AflII	CTTAAG	1 cut(s)	413
AgsI	TTSAA	2 cut(s)	12, 511
AjiI	CACGTC	1 cut(s)	820
AjnI	CCWGG	3 cut(s)	15, 232, 877
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 618, 650
AluBI	AGCT	7 cut(s)	124, 160, 181, 401, 412, 515, 726
AluI	AGCT	7 cut(s)	124, 160, 181, 401, 412, 515, 726
Alw26I	GTCTC	1 cut(s)	657
AlwI	GGATC	1 cut(s)	122
AoxI	GGCC	1 cut(s)	777
ApeKI	GCWGC	1 cut(s)	47
Asp718I	GGTACC	1 cut(s)	849
AsuC2I	CCSGG	1 cut(s)	353
AsuHPI	GGTGA	3 cut(s)	313, 436, 725
AxyI	CCTNAGG	1 cut(s)	258
BanI	GGYRCC	1 cut(s)	849
BbvI	GCAGC	1 cut(s)	59
BccI	CCATC	1 cut(s)	443
BceAI	ACGGC	1 cut(s)	421
BciT130I	CCWGG	3 cut(s)	17, 234, 879
BciVI	GTATCC	1 cut(s)	29
BclI	TGATCA	1 cut(s)	487
BcnI	CCSGG	1 cut(s)	353
BcoDI	GTCTC	1 cut(s)	657
BfaI	CTAG	1 cut(s)	770
BfrI	CTTAAG	1 cut(s)	413
BfuI	GTATCC	1 cut(s)	29
BglII	AGATCT	2 cut(s)	605, 766
BisI	GCNGC	1 cut(s)	48
BlpI	GCTNAGC	1 cut(s)	432
BlsI	GCNGC	1 cut(s)	49
Bme1390I	CCNGG	4 cut(s)	17, 234, 353, 879
BmgBI	CACGTC	1 cut(s)	820
BmiI	GGNNCC	1 cut(s)	851
BmrFI	CCNGG	4 cut(s)	17, 234, 353, 879
BmsI	GCATC	5 cut(s)	282, 433, 820, 829, 882
Bpu1102I	GCTNAGC	1 cut(s)	432
BpuEI	CTTGAG	4 cut(s)	79, 317, 406, 672
BpuMI	CCSGG	1 cut(s)	353
Bsa29I	ATCGAT	1 cut(s)	249
BsaHI	GRCGYC	1 cut(s)	641
BsaI	GGTCTC	1 cut(s)	657
BsaWI	WCCGGW	1 cut(s)	421
BsaXI	ACNNNNNCTCC	4 cut(s)	401, 431, 570, 600
Bse21I	CCTNAGG	1 cut(s)	258
BseBI	CCWGG	3 cut(s)	17, 234, 879
BseCI	ATCGAT	1 cut(s)	249
BseGI	GGATG	4 cut(s)	69, 448, 504, 835
BseMII	CTCAG	2 cut(s)	249, 909
BseRI	GAGGAG	1 cut(s)	411
BseXI	GCAGC	1 cut(s)	59
Bsh1236I	CGCG	1 cut(s)	222
BshFI	GGCC	1 cut(s)	779
BshNI	GGYRCC	1 cut(s)	849
BshVI	ATCGAT	1 cut(s)	249
BsiSI	CCGG	2 cut(s)	353, 422
BslFI	GGGAC	4 cut(s)	335, 652, 810, 944
BsmAI	GTCTC	1 cut(s)	657
BsmFI	GGGAC	4 cut(s)	335, 652, 810, 944
BsnI	GGCC	1 cut(s)	779
Bso31I	GGTCTC	1 cut(s)	657
Bsp143I	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
Bsp1720I	GCTNAGC	1 cut(s)	432
Bsp68I	TCGCGA	1 cut(s)	222
BspACI	CCGC	1 cut(s)	390
BspANI	GGCC	1 cut(s)	779
BspCNI	CTCAG	2 cut(s)	250, 910
BspDI	ATCGAT	1 cut(s)	249
BspFNI	CGCG	1 cut(s)	222
BspHI	TCATGA	1 cut(s)	211
BspLI	GGNNCC	1 cut(s)	851
BspPI	GGATC	1 cut(s)	122
BspT107I	GGYRCC	1 cut(s)	849
BspTI	CTTAAG	1 cut(s)	413
BspTNI	GGTCTC	1 cut(s)	657
BsrBI	CCGCTC	1 cut(s)	390
BssMI	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
BssNI	GRCGYC	1 cut(s)	641
Bst2UI	CCWGG	3 cut(s)	17, 234, 879
Bst6I	CTCTTC	2 cut(s)	621, 660
BstACI	GRCGYC	1 cut(s)	641
BstAFI	CTTAAG	1 cut(s)	413
BstDEI	CTNAG	7 cut(s)	28, 258, 432, 727, 888, 918, 942
BstF5I	GGATG	4 cut(s)	69, 448, 504, 835
BstFNI	CGCG	1 cut(s)	222
BstKTI	GATC	8 cut(s)	87, 115, 130, 490, 558, 583, 608, 769
BstMAI	GTCTC	1 cut(s)	657
BstMBI	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
BstMWI	GCNNNNNNNGC	4 cut(s)	47, 157, 387, 839
BstNI	CCWGG	3 cut(s)	17, 234, 879
BstSCI	CCNGG	4 cut(s)	15, 232, 351, 877
BstUI	CGCG	1 cut(s)	222
BstV1I	GCAGC	1 cut(s)	59
BstX2I	RGATCY	2 cut(s)	605, 766
BstYI	RGATCY	2 cut(s)	605, 766
Bsu15I	ATCGAT	1 cut(s)	249
Bsu36I	CCTNAGG	1 cut(s)	258
BsuI	GTATCC	1 cut(s)	29
BsuRI	GGCC	1 cut(s)	779
BsuTUI	ATCGAT	1 cut(s)	249
BtrI	CACGTC	1 cut(s)	820
BtsCI	GGATG	4 cut(s)	69, 448, 504, 835
BtuMI	TCGCGA	1 cut(s)	222
CciI	TCATGA	1 cut(s)	211
ClaI	ATCGAT	1 cut(s)	249
CseI	GACGC	1 cut(s)	370
Csp6I	GTAC	1 cut(s)	850
CviAII	CATG	6 cut(s)	212, 545, 584, 781, 934, 953
CviQI	GTAC	1 cut(s)	850
DdeI	CTNAG	7 cut(s)	28, 258, 432, 727, 888, 918, 942
DpnI	GATC	8 cut(s)	86, 114, 129, 489, 557, 582, 607, 768
DpnII	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
Eam1104I	CTCTTC	2 cut(s)	621, 660
EarI	CTCTTC	2 cut(s)	621, 660
Eco31I	GGTCTC	1 cut(s)	657
Eco32I	GATATC	2 cut(s)	619, 672
Eco57I	CTGAAG	1 cut(s)	645
Eco81I	CCTNAGG	1 cut(s)	258
EcoRII	CCWGG	3 cut(s)	15, 232, 877
EcoRV	GATATC	2 cut(s)	619, 672
FaeI	CATG	6 cut(s)	215, 548, 587, 784, 937, 956
FalI	AAGNNNNNCTT	4 cut(s)	144, 176, 639, 671
FaqI	GGGAC	4 cut(s)	335, 652, 810, 944
FatI	CATG	6 cut(s)	211, 544, 583, 780, 933, 952
FbaI	TGATCA	1 cut(s)	487
Fnu4HI	GCNGC	1 cut(s)	48
FokI	GGATG	4 cut(s)	56, 455, 511, 842
Fsp4HI	GCNGC	1 cut(s)	48
FspBI	CTAG	1 cut(s)	770
GluI	GCNGC	1 cut(s)	48
HaeIII	GGCC	1 cut(s)	779
HapII	CCGG	2 cut(s)	353, 422
HgaI	GACGC	1 cut(s)	370
Hin1I	GRCGYC	1 cut(s)	641
Hin1II	CATG	6 cut(s)	215, 548, 587, 784, 937, 956
HincII	GTYRAC	1 cut(s)	915
HindII	GTYRAC	1 cut(s)	915
HindIII	AAGCTT	3 cut(s)	122, 158, 179
HinfI	GANTC	8 cut(s)	8, 205, 374, 541, 676, 788, 798, 949
HpaII	CCGG	2 cut(s)	353, 422
HphI	GGTGA	3 cut(s)	313, 436, 725
Hpy166II	GTNNAC	1 cut(s)	915
Hpy188I	TCNGA	6 cut(s)	7, 132, 331, 625, 681, 959
Hpy188III	TCNNGA	6 cut(s)	212, 221, 385, 491, 689, 760
Hpy8I	GTNNAC	1 cut(s)	915
Hpy99I	CGWCG	3 cut(s)	136, 646, 821
HpyAV	CCTTC	3 cut(s)	87, 193, 488
HpyCH4IV	ACGT	2 cut(s)	641, 819
HpyCH4V	TGCA	3 cut(s)	168, 277, 529
HpyF10VI	GCNNNNNNNGC	4 cut(s)	47, 157, 387, 839
HpyF3I	CTNAG	7 cut(s)	28, 258, 432, 727, 888, 918, 942
HpySE526I	ACGT	2 cut(s)	641, 819
Hsp92I	GRCGYC	1 cut(s)	641
Hsp92II	CATG	6 cut(s)	215, 548, 587, 784, 937, 956
KpnI	GGTACC	1 cut(s)	853
Ksp22I	TGATCA	1 cut(s)	487
Kzo9I	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
LmnI	GCTCC	6 cut(s)	148, 355, 398, 409, 520, 723
Lsp1109I	GCAGC	1 cut(s)	59
LweI	GCATC	5 cut(s)	282, 433, 820, 829, 882
MaeI	CTAG	1 cut(s)	770
MaeII	ACGT	2 cut(s)	641, 819
MaeIII	GTNAC	1 cut(s)	937
MalI	GATC	8 cut(s)	86, 114, 129, 489, 557, 582, 607, 768
MbiI	CCGCTC	1 cut(s)	390
MboI	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
MboII	GAAGA	8 cut(s)	200, 514, 615, 638, 643, 647, 916, 958
MfeI	CAATTG	1 cut(s)	311
MflI	RGATCY	2 cut(s)	605, 766
MluCI	AATT	2 cut(s)	311, 858
MlyI	GAGTC	1 cut(s)	792
MmeI	TCCRAC	6 cut(s)	13, 97, 126, 155, 420, 556
MseI	TTAA	5 cut(s)	414, 561, 752, 810, 867
MslI	CAYNNNNRTG	1 cut(s)	549
MspCI	CTTAAG	1 cut(s)	413
MspI	CCGG	2 cut(s)	353, 422
MspR9I	CCNGG	4 cut(s)	17, 234, 353, 879
MunI	CAATTG	1 cut(s)	311
MvaI	CCWGG	3 cut(s)	17, 234, 879
MvnI	CGCG	1 cut(s)	222
MwoI	GCNNNNNNNGC	4 cut(s)	47, 157, 387, 839
NciI	CCSGG	1 cut(s)	353
NdeII	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
NlaIII	CATG	6 cut(s)	215, 548, 587, 784, 937, 956
NlaIV	GGNNCC	1 cut(s)	851
NmuCI	GTSAC	1 cut(s)	937
NruI	TCGCGA	1 cut(s)	222
PagI	TCATGA	1 cut(s)	211
PcsI	WCGNNNNNNNCGW	1 cut(s)	671
PfeI	GAWTC	7 cut(s)	8, 205, 374, 541, 676, 788, 949
PflFI	GACNNNGTC	1 cut(s)	935
PfoI	TCCNGGA	3 cut(s)	15, 351, 877
PkrI	GCNGC	1 cut(s)	49
PleI	GAGTC	1 cut(s)	792
PpsI	GAGTC	1 cut(s)	792
PsiI	TTATAA	1 cut(s)	857
Psp6I	CCWGG	3 cut(s)	15, 232, 877
PspGI	CCWGG	3 cut(s)	15, 232, 877
PspN4I	GGNNCC	1 cut(s)	851
PsuI	RGATCY	2 cut(s)	605, 766
PsyI	GACNNNGTC	1 cut(s)	935
RruI	TCGCGA	1 cut(s)	222
RsaI	GTAC	1 cut(s)	851
RsaNI	GTAC	1 cut(s)	850
RseI	CAYNNNNRTG	1 cut(s)	549
SaqAI	TTAA	5 cut(s)	414, 561, 752, 810, 867
SatI	GCNGC	1 cut(s)	48
Sau3AI	GATC	8 cut(s)	84, 112, 127, 487, 555, 580, 605, 766
SchI	GAGTC	1 cut(s)	792
ScrFI	CCNGG	4 cut(s)	17, 234, 353, 879
SfaNI	GCATC	5 cut(s)	282, 433, 820, 829, 882
SmiMI	CAYNNNNRTG	1 cut(s)	549
SmlI	CTYRAG	5 cut(s)	94, 296, 385, 413, 687
SmoI	CTYRAG	5 cut(s)	94, 296, 385, 413, 687
Sse9I	AATT	2 cut(s)	311, 858
SsiI	CCGC	1 cut(s)	390
SspMI	CTAG	1 cut(s)	770
StyD4I	CCNGG	4 cut(s)	15, 232, 351, 877
TaiI	ACGT	2 cut(s)	644, 822
TaqI	TCGA	8 cut(s)	87, 249, 267, 290, 377, 644, 674, 816
TasI	AATT	2 cut(s)	311, 858
TfiI	GAWTC	7 cut(s)	8, 205, 374, 541, 676, 788, 949
Tru1I	TTAA	5 cut(s)	414, 561, 752, 810, 867
Tru9I	TTAA	5 cut(s)	414, 561, 752, 810, 867
TseFI	GTSAC	1 cut(s)	937
TseI	GCWGC	1 cut(s)	47
Tsp45I	GTSAC	1 cut(s)	937
TspDTI	ATGAA	3 cut(s)	58, 200, 515
TspGWI	ACGGA	2 cut(s)	648, 738
Tth111I	GACNNNGTC	1 cut(s)	935
Vha464I	CTTAAG	1 cut(s)	413
XspI	CTAG	1 cut(s)	770
ZraI	GACGTC	1 cut(s)	642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.