FvH4_7g34131

Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
24098580 .. 24099527
948 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g34131.t1

Sequence Viewer

Length: 948 bp
ATGTCCGACAGCAATGGGCGACGCCACCGCATCGGCTACGCCTTCCCTCCGAAGAAAGAGCAGACCTTCATCCAGCCGTCGCTGATCAGCCATGCCCAGCAGAACGGCATCGATCTGGTCCCCGTGGATCCCGGGAAGCCCTTGACCCAGCAGGGCCCCTTCGACTGCATCATCCACAAGCTCTACCACGACGAATGGAACACCCAGCTCAACGAATTCTCCTCTCTCTACCCCCGCACCGTCATCCTCGACCCGCCCGACTCCATCGCCCGCCTCCACAACCGCGTCTCCATGCTCGACGTCATCAACGCCGCCTTCAAAGCCCCCCGCGTCGAGAATGTCTCCGTCCCCAAGCAGGTCCTCATCCACGACGCCGCCGAACTGGAGACCGATTTGGGTTTGAAGTTTCCGGTGATTGCCAAGCCCCTGCTGGCCAATGGCAGCGCCAAGTCGCACCAGATGTCTATGGTGTTCAGCAGCGAGGGGATCAAGAAGGTCGAGACCCCCATTTTGCTGCAGGAGTTTGTCAACCACGGAGGTACCATCTTCAAGGTCTATGTCATCGGGGATTACACCGAGTGCGTCAAGCGCAGGTCGCTGCCCGATATCTCTGACGAGCAGCGCGCAAAACTGGCAGCGGATGTGTTGCCATTCTCGCAGATTTCGAATGAAGAGGTTGACATTGAGGGTGTGGAGATGCCGCCGCCTGGGTTTGTGGAGGAGCTGGCCAAGGGGATCAGCGACGGCCTCAAGCTCAATTTCTTCAATTTTGATGTCATCAGGGACTCCAATGACAAGCACAGCTATTATGTTATTGACATCAACTACTTCCCTGGCTACGCCAAGCTCCACAACTTCGAGCACCTTTTGACAGACTTTTTCTTGTCTGTGCTTTCCAAGAAGTCTCAGACTCAGCTTGAACAAGGCAAGGAAGCGAAGCCGGAATGA

Protein Analysis

316

Amino Acids

35.46

Weight (kDa)

5.68

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ins134_P3_kin_N PF17927 10 - 89 1.7e-29 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
Ins134_P3_kin PF05770 112 - 295 2.3e-64 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 303
Acc36I ACCTGC 2 cut(s) 346, 582
Acc65I GGTACC 1 cut(s) 539
AccB1I GGYRCC 1 cut(s) 539
AccII CGCG 3 cut(s) 285, 330, 624
AclWI GGATC 4 cut(s) 122, 135, 494, 743
AcoI YGGCCR 2 cut(s) 432, 726
AcsI RAATTY 1 cut(s) 215
AcyI GRCGYC 3 cut(s) 22, 300, 372
AdeI CACNNNGTG 1 cut(s) 579
AfaI GTAC 1 cut(s) 541
AfiI CCNNNNNNNGG 2 cut(s) 355, 707
AgsI TTSAA 5 cut(s) 319, 403, 550, 766, 920
AjnI CCWGG 2 cut(s) 706, 832
AluBI AGCT 7 cut(s) 181, 208, 724, 754, 804, 847, 916
AluI AGCT 7 cut(s) 181, 208, 724, 754, 804, 847, 916
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 5 cut(s) 292, 346, 380, 494, 909
AlwI GGATC 4 cut(s) 122, 135, 494, 743
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 4 cut(s) 154, 432, 726, 745
ApaI GGGCCC 1 cut(s) 158
ApeKI GCWGC 6 cut(s) 441, 477, 514, 598, 619, 635
ApoI RAATTY 1 cut(s) 215
ArsI GACNNNNNNTTYG 2 cut(s) 493, 525
Asp718I GGTACC 1 cut(s) 539
AspLEI GCGC 4 cut(s) 446, 591, 624, 626
AspS9I GGNCC 4 cut(s) 118, 154, 155, 358
AsuC2I CCSGG 2 cut(s) 132, 133
AsuHPI GGTGA 1 cut(s) 424
AsuII TTCGAA 1 cut(s) 665
AvaI CYCGRG 1 cut(s) 131
AvaII GGWCC 2 cut(s) 118, 358
BaeGI GKGCMC 1 cut(s) 158
BaeI ACNNNNGTAYC 2 cut(s) 523, 556
BalI TGGCCA 2 cut(s) 434, 728
BamHI GGATCC 1 cut(s) 127
BanI GGYRCC 1 cut(s) 539
BanII GRGCYC 1 cut(s) 158
Bbv12I GWGCWC 1 cut(s) 864
BbvI GCAGC 6 cut(s) 453, 489, 501, 585, 631, 647
BccI CCATC 2 cut(s) 272, 551
BceAI ACGGC 3 cut(s) 61, 121, 760
BciT130I CCWGG 2 cut(s) 708, 834
BclI TGATCA 1 cut(s) 84
BcnI CCSGG 2 cut(s) 132, 133
BcoDI GTCTC 5 cut(s) 292, 346, 380, 494, 909
BfmI CTRYAG 1 cut(s) 515
BfoI RGCGCY 1 cut(s) 447
BfuAI ACCTGC 2 cut(s) 346, 582
Bme1390I CCNGG 4 cut(s) 132, 133, 708, 834
Bme18I GGWCC 2 cut(s) 118, 358
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 4 cut(s) 118, 154, 155, 358
BmiI GGNNCC 5 cut(s) 120, 129, 156, 157, 541
BmrFI CCNGG 4 cut(s) 132, 133, 708, 834
BmsI GCATC 4 cut(s) 39, 117, 177, 687
BplI GAGNNNNNCTC 2 cut(s) 326, 358
BpmI CTGGAG 1 cut(s) 404
Bpu14I TTCGAA 1 cut(s) 665
BpuEI CTTGAG 1 cut(s) 734
BpuMI CCSGG 2 cut(s) 132, 133
Bsa29I ATCGAT 1 cut(s) 111
BsaHI GRCGYC 3 cut(s) 22, 300, 372
BsaI GGTCTC 2 cut(s) 380, 494
BsaJI CCNNGG 6 cut(s) 123, 131, 532, 707, 729, 832
BsaWI WCCGGW 1 cut(s) 409
BsaXI ACNNNNNCTCC 4 cut(s) 203, 233, 272, 302
Bsc4I CCNNNNNNNGG 2 cut(s) 355, 707
Bse1I ACTGG 2 cut(s) 387, 636
Bse3DI GCAATG 1 cut(s) 19
BseBI CCWGG 2 cut(s) 708, 834
BseCI ATCGAT 1 cut(s) 111
BseDI CCNNGG 6 cut(s) 123, 131, 532, 707, 729, 832
BseGI GGATG 5 cut(s) 69, 171, 243, 363, 646
BseLI CCNNNNNNNGG 2 cut(s) 355, 707
BseMI GCAATG 1 cut(s) 19
BseMII CTCAG 2 cut(s) 920, 926
BseNI ACTGG 2 cut(s) 387, 636
BsePI GCGCGC 1 cut(s) 622
BseRI GAGGAG 2 cut(s) 211, 734
BseSI GKGCMC 1 cut(s) 158
BseXI GCAGC 6 cut(s) 453, 489, 501, 585, 631, 647
BseYI CCCAGC 3 cut(s) 96, 147, 204
Bsh1236I CGCG 3 cut(s) 285, 330, 624
BshFI GGCC 4 cut(s) 156, 434, 728, 747
BshNI GGYRCC 1 cut(s) 539
BshVI ATCGAT 1 cut(s) 111
BsiHKAI GWGCWC 1 cut(s) 864
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 3 cut(s) 132, 410, 941
BslFI GGGAC 3 cut(s) 104, 332, 797
BslI CCNNNNNNNGG 2 cut(s) 355, 707
BsmAI GTCTC 5 cut(s) 292, 346, 380, 494, 909
BsmBI CGTCTC 1 cut(s) 292
BsmFI GGGAC 3 cut(s) 104, 332, 797
BsnI GGCC 4 cut(s) 156, 434, 728, 747
Bso31I GGTCTC 2 cut(s) 380, 494
BsoBI CYCGRG 1 cut(s) 131
Bsp119I TTCGAA 1 cut(s) 665
Bsp120I GGGCCC 1 cut(s) 154
Bsp1286I GDGCHC 2 cut(s) 158, 864
Bsp143I GATC 5 cut(s) 84, 112, 127, 486, 735
BspANI GGCC 4 cut(s) 156, 434, 728, 747
BspCNI CTCAG 2 cut(s) 919, 925
BspDI ATCGAT 1 cut(s) 111
BspFNI CGCG 3 cut(s) 285, 330, 624
BspLI GGNNCC 5 cut(s) 120, 129, 156, 157, 541
BspMAI CTGCAG 1 cut(s) 519
BspMI ACCTGC 2 cut(s) 346, 582
BspPI GGATC 4 cut(s) 122, 135, 494, 743
BspT104I TTCGAA 1 cut(s) 665
BspT107I GGYRCC 1 cut(s) 539
BspTNI GGTCTC 2 cut(s) 380, 494
BsrDI GCAATG 1 cut(s) 19
BsrI ACTGG 2 cut(s) 387, 636
BssECI CCNNGG 6 cut(s) 123, 131, 532, 707, 729, 832
BssHII GCGCGC 1 cut(s) 622
BssMI GATC 5 cut(s) 84, 112, 127, 486, 735
BssNI GRCGYC 3 cut(s) 22, 300, 372
BssT1I CCWWGG 1 cut(s) 729
Bst2UI CCWGG 2 cut(s) 708, 834
Bst4CI ACNGT 1 cut(s) 241
Bst6I CTCTTC 1 cut(s) 666
BstACI GRCGYC 3 cut(s) 22, 300, 372
BstBI TTCGAA 1 cut(s) 665
BstC8I GCNNGC 4 cut(s) 271, 432, 624, 726
BstDEI CTNAG 2 cut(s) 906, 912
BstDSI CCRYGG 2 cut(s) 123, 532
BstF5I GGATG 5 cut(s) 69, 171, 243, 363, 646
BstFNI CGCG 3 cut(s) 285, 330, 624
BstH2I RGCGCY 1 cut(s) 447
BstHHI GCGC 4 cut(s) 446, 591, 624, 626
BstKTI GATC 5 cut(s) 87, 115, 130, 489, 738
BstMAI GTCTC 5 cut(s) 292, 346, 380, 494, 909
BstMBI GATC 5 cut(s) 84, 112, 127, 486, 735
BstMWI GCNNNNNNNGC 5 cut(s) 320, 588, 595, 632, 655
BstNI CCWGG 2 cut(s) 708, 834
BstSCI CCNGG 4 cut(s) 130, 131, 706, 832
BstSFI CTRYAG 1 cut(s) 515
BstSLI GKGCMC 1 cut(s) 158
BstUI CGCG 3 cut(s) 285, 330, 624
BstV1I GCAGC 6 cut(s) 453, 489, 501, 585, 631, 647
BstX2I RGATCY 1 cut(s) 127
BstYI RGATCY 1 cut(s) 127
Bsu15I ATCGAT 1 cut(s) 111
BsuRI GGCC 4 cut(s) 156, 434, 728, 747
BsuTUI ATCGAT 1 cut(s) 111
BtgI CCRYGG 2 cut(s) 123, 532
BtgZI GCGATG 1 cut(s) 250
BtsCI GGATG 5 cut(s) 69, 171, 243, 363, 646
BveI ACCTGC 2 cut(s) 346, 582
Cac8I GCNNGC 4 cut(s) 271, 432, 624, 726
CfoI GCGC 4 cut(s) 446, 591, 624, 626
Cfr13I GGNCC 4 cut(s) 118, 154, 155, 358
Cfr9I CCCGGG 1 cut(s) 131
ClaI ATCGAT 1 cut(s) 111
CseI GACGC 5 cut(s) 30, 274, 319, 380, 571
Csp6I GTAC 1 cut(s) 540
CviAII CATG 2 cut(s) 92, 292
CviQI GTAC 1 cut(s) 540
DdeI CTNAG 2 cut(s) 906, 912
DpnI GATC 5 cut(s) 86, 114, 129, 488, 737
DpnII GATC 5 cut(s) 84, 112, 127, 486, 735
DraIII CACNNNGTG 1 cut(s) 579
EaeI YGGCCR 2 cut(s) 432, 726
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
Eco130I CCWWGG 1 cut(s) 729
Eco24I GRGCYC 1 cut(s) 158
Eco31I GGTCTC 2 cut(s) 380, 494
Eco32I GATATC 1 cut(s) 607
Eco47I GGWCC 2 cut(s) 118, 358
Eco88I CYCGRG 1 cut(s) 131
EcoO109I RGGNCCY 3 cut(s) 154, 155, 358
EcoRI GAATTC 1 cut(s) 215
EcoRII CCWGG 2 cut(s) 706, 832
EcoRV GATATC 1 cut(s) 607
EcoT14I CCWWGG 1 cut(s) 729
EcoT38I GRGCYC 1 cut(s) 158
ErhI CCWWGG 1 cut(s) 729
Esp3I CGTCTC 1 cut(s) 292
FaeI CATG 2 cut(s) 95, 295
FaiI YATR 5 cut(s) 93, 293, 467, 558, 810
FaqI GGGAC 3 cut(s) 104, 332, 797
FatI CATG 2 cut(s) 91, 291
FauI CCCGC 4 cut(s) 242, 261, 278, 335
FbaI TGATCA 1 cut(s) 84
FokI GGATG 5 cut(s) 56, 158, 230, 350, 653
FriOI GRGCYC 1 cut(s) 158
GlaI GCGC 4 cut(s) 445, 590, 623, 625
GsaI CCCAGC 3 cut(s) 100, 151, 208
GsuI CTGGAG 1 cut(s) 404
HaeII RGCGCY 1 cut(s) 447
HaeIII GGCC 4 cut(s) 156, 434, 728, 747
HapII CCGG 3 cut(s) 132, 410, 941
HgaI GACGC 5 cut(s) 30, 274, 319, 380, 571
HhaI GCGC 4 cut(s) 446, 591, 624, 626
Hin1I GRCGYC 3 cut(s) 22, 300, 372
Hin1II CATG 2 cut(s) 95, 295
Hin6I GCGC 4 cut(s) 444, 589, 622, 624
HinP1I GCGC 4 cut(s) 444, 589, 622, 624
HincII GTYRAC 2 cut(s) 529, 679
HindII GTYRAC 2 cut(s) 529, 679
HinfI GANTC 3 cut(s) 260, 785, 910
HpaII CCGG 3 cut(s) 132, 410, 941
HphI GGTGA 1 cut(s) 424
Hpy166II GTNNAC 2 cut(s) 529, 679
Hpy188I TCNGA 4 cut(s) 7, 51, 613, 909
Hpy188III TCNNGA 3 cut(s) 334, 490, 499
Hpy8I GTNNAC 2 cut(s) 529, 679
Hpy99I CGWCG 7 cut(s) 24, 82, 194, 302, 335, 374, 746
HpyAV CCTTC 5 cut(s) 52, 76, 169, 325, 487
HpyCH4III ACNGT 1 cut(s) 241
HpyCH4IV ACGT 1 cut(s) 300
HpyCH4V TGCA 2 cut(s) 168, 517
HpyF10VI GCNNNNNNNGC 5 cut(s) 320, 588, 595, 632, 655
HpyF3I CTNAG 2 cut(s) 906, 912
HpySE526I ACGT 1 cut(s) 300
Hsp92I GRCGYC 3 cut(s) 22, 300, 372
Hsp92II CATG 2 cut(s) 95, 295
HspAI GCGC 4 cut(s) 444, 589, 622, 624
KpnI GGTACC 1 cut(s) 543
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 5 cut(s) 84, 112, 127, 486, 735
LmnI GCTCC 2 cut(s) 721, 852
Lsp1109I GCAGC 6 cut(s) 453, 489, 501, 585, 631, 647
LweI GCATC 4 cut(s) 39, 117, 177, 687
MaeII ACGT 1 cut(s) 300
MalI GATC 5 cut(s) 86, 114, 129, 488, 737
MboI GATC 5 cut(s) 84, 112, 127, 486, 735
MboII GAAGA 4 cut(s) 64, 538, 683, 754
MflI RGATCY 1 cut(s) 127
MhlI GDGCHC 2 cut(s) 158, 864
MlsI TGGCCA 2 cut(s) 434, 728
MluCI AATT 3 cut(s) 215, 757, 766
MluNI TGGCCA 2 cut(s) 434, 728
MlyI GAGTC 3 cut(s) 254, 779, 904
MmeI TCCRAC 1 cut(s) 30
Mox20I TGGCCA 2 cut(s) 434, 728
MscI TGGCCA 2 cut(s) 434, 728
Msp20I TGGCCA 2 cut(s) 434, 728
MspA1I CMGCKG 1 cut(s) 638
MspI CCGG 3 cut(s) 132, 410, 941
MspR9I CCNGG 4 cut(s) 132, 133, 708, 834
MvaI CCWGG 2 cut(s) 708, 834
MvnI CGCG 3 cut(s) 285, 330, 624
MwoI GCNNNNNNNGC 5 cut(s) 320, 588, 595, 632, 655
NciI CCSGG 2 cut(s) 132, 133
NdeII GATC 5 cut(s) 84, 112, 127, 486, 735
NlaIII CATG 2 cut(s) 95, 295
NlaIV GGNNCC 5 cut(s) 120, 129, 156, 157, 541
NspV TTCGAA 1 cut(s) 665
PauI GCGCGC 1 cut(s) 622
PcsI WCGNNNNNNNCGW 3 cut(s) 255, 375, 662
PleI GAGTC 3 cut(s) 254, 779, 904
PpsI GAGTC 3 cut(s) 254, 779, 904
PpuMI RGGWCCY 1 cut(s) 358
Psp5II RGGWCCY 1 cut(s) 358
Psp6I CCWGG 2 cut(s) 706, 832
PspFI CCCAGC 3 cut(s) 96, 147, 204
PspGI CCWGG 2 cut(s) 706, 832
PspN4I GGNNCC 5 cut(s) 120, 129, 156, 157, 541
PspOMI GGGCCC 1 cut(s) 154
PspPI GGNCC 4 cut(s) 118, 154, 155, 358
PspPPI RGGWCCY 1 cut(s) 358
PstI CTGCAG 1 cut(s) 519
PsuI RGATCY 1 cut(s) 127
PteI GCGCGC 1 cut(s) 622
RsaI GTAC 1 cut(s) 541
RsaNI GTAC 1 cut(s) 540
Sau3AI GATC 5 cut(s) 84, 112, 127, 486, 735
Sau96I GGNCC 4 cut(s) 118, 154, 155, 358
SchI GAGTC 3 cut(s) 254, 779, 904
ScrFI CCNGG 4 cut(s) 132, 133, 708, 834
SduI GDGCHC 2 cut(s) 158, 864
SfaNI GCATC 4 cut(s) 39, 117, 177, 687
SfcI CTRYAG 1 cut(s) 515
SfuI TTCGAA 1 cut(s) 665
SinI GGWCC 2 cut(s) 118, 358
SmaI CCCGGG 1 cut(s) 133
SmlI CTYRAG 1 cut(s) 749
SmoI CTYRAG 1 cut(s) 749
Sse9I AATT 3 cut(s) 215, 757, 766
StyD4I CCNGG 4 cut(s) 130, 131, 706, 832
StyI CCWWGG 1 cut(s) 729
TaaI ACNGT 1 cut(s) 241
TaiI ACGT 1 cut(s) 303
TaqI TCGA 8 cut(s) 111, 162, 249, 297, 333, 498, 665, 858
TaqII GACCGA 1 cut(s) 404
TasI AATT 3 cut(s) 215, 757, 766
TauI GCSGC 4 cut(s) 314, 377, 703, 706
TseI GCWGC 6 cut(s) 441, 477, 514, 598, 619, 635
TspDTI ATGAA 2 cut(s) 58, 684
TspGWI ACGGA 2 cut(s) 334, 549
TspMI CCCGGG 1 cut(s) 131
VpaK11BI GGWCC 2 cut(s) 118, 358
XapI RAATTY 1 cut(s) 215
XcmI CCANNNNNNNNNTGG 1 cut(s) 427
XmaI CCCGGG 1 cut(s) 131
ZraI GACGTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.