pycom07g28190

Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
27606490 .. 27607581
1092 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g28190.1

Sequence Viewer

Length: 1092 bp
ATGGATCCAAGCACAAAGTCACTAGTATCAGAATCAGAAGCAGCACCGGTCCGTCGCTACCGCATCGGGTACGCCTTCGCACCCAAAAAAGAGCAGACCTTCATCCAGCCCTCTCTCCTCCACCATGCCTCCCGATACGGCATCGATTTCGTCCCCATTTCAATCCCCGATTCCACCACCACCGCCAAGACCCTGATCGATCAAGTCCCCTTCGATTGCATCATCCACAAGATCTACGGCCCCCACTGGAACCAACACCTCAAGGAATACTCGTCCCGGTATCCACAAACGCTCATTCTTGACCCGCCCGAGTCCATCGAGCGCCTCCACAATCGGGTCTCCATGCTCGACGTCTTCGCCGCCTTTGAATTGAAGCCGCGTCAGTCAGGCGACAAGTTCCAATCGAAGATCTCGGTGCCCAAACAGGTGCCGGTTGATCATTACCCGGAAGGCGAAGAAGAAACTAAGTTGTTGGCCGGGTTGGAGTTTCCGGTGATTGCAAAGCCATTACTGGCGAATGGCAGCACCAAGTCGCACGAGATGTGTTTGATTTTTAGCCCCAAGGGGTTGCGCAGTCTTCTAGCGGATACTAATAGTCCCATTTTGCTGCAACAGTTTGCGAACCACGGCGGGGTGGTGTTCAAGGGTTACGCGATTGGGGAGCACGTCCAGTGCGTCAAGCGGAGGTCGCTGCCGGACATTTCGAAGGAGCGGGTGACCGCATTAGAAGAAGCGGTGCTTCCGTTTTCGCAGATATCAAATTCGGCGAATGACGAGCATAATCTGGCTCATGATCCTCACGAAATGCCTCCTCTGGAGTTTGTTGAGGAGGCGGCGAAGAGGATACGCGTGGGCCTCAAACTCAACTTCTTCAACTTTGACATGATAAGAGATTCGAAGGACCCCAACAGCTATTTTGTGATCGACATCAACTACTTTCCTGGGTATGCCAAATTGCCTAACTATGAGCATGCCTTTACAGACTTTTTGCTGAATCTGCTTTCAACTAGTAGCCATCCCCAAAAGCAAAAGGAGCTGCTGCAGCTCAAGGAAGAAGAAGGTGCTACCAGTTTCGAGTCCGATGTCAAATAA

Protein Analysis

364

Amino Acids

41.1

Weight (kDa)

6.11

Isoelectric Point (pI)

50.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ins134_P3_kin_N PF17927 21 - 106 4.8e-22 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
Ins134_P3_kin PF05770 134 - 331 1.4e-64 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 354
Acc16I TGCGCA 1 cut(s) 572
AccB1I GGYRCC 2 cut(s) 415, 427
AccBSI CCGCTC 1 cut(s) 712
AccII CGCG 3 cut(s) 379, 653, 849
AclWI GGATC 2 cut(s) 12, 788
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 1 cut(s) 760
AcyI GRCGYC 1 cut(s) 351
AfaI GTAC 1 cut(s) 71
AfiI CCNNNNNNNGG 2 cut(s) 334, 631
AflIII ACRYGT 1 cut(s) 847
AgeI ACCGGT 1 cut(s) 46
AgsI TTSAA 6 cut(s) 162, 368, 373, 643, 874, 1005
AhlI ACTAGT 2 cut(s) 22, 1007
AjiI CACGTC 1 cut(s) 667
AjnI CCWGG 1 cut(s) 940
AluBI AGCT 3 cut(s) 912, 1036, 1045
AluI AGCT 3 cut(s) 912, 1036, 1045
Alw21I GWGCWC 1 cut(s) 666
Alw26I GTCTC 1 cut(s) 343
AlwI GGATC 2 cut(s) 12, 788
Ama87I CYCGRG 1 cut(s) 308
AoxI GGCC 3 cut(s) 238, 474, 853
ApeKI GCWGC 7 cut(s) 41, 522, 607, 691, 1036, 1039, 1042
ApoI RAATTY 1 cut(s) 760
AsiGI ACCGGT 1 cut(s) 46
AspLEI GCGC 2 cut(s) 324, 573
AspS9I GGNCC 4 cut(s) 49, 239, 853, 901
AsuC2I CCSGG 3 cut(s) 277, 446, 478
AsuHPI GGTGA 2 cut(s) 505, 727
AsuII TTCGAA 2 cut(s) 704, 896
AvaI CYCGRG 1 cut(s) 308
AvaII GGWCC 2 cut(s) 49, 901
BaeGI GKGCMC 1 cut(s) 420
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 2 cut(s) 415, 427
BauI CACGAG 1 cut(s) 536
BbsI GAAGAC 2 cut(s) 346, 569
Bbv12I GWGCWC 1 cut(s) 666
BbvI GCAGC 7 cut(s) 53, 534, 594, 678, 1023, 1026, 1054
BccI CCATC 2 cut(s) 323, 1023
BceAI ACGGC 3 cut(s) 154, 253, 643
BcgI CGANNNNNNTGC 2 cut(s) 130, 164
BciT130I CCWGG 1 cut(s) 942
BciVI GTATCC 3 cut(s) 291, 580, 837
BclI TGATCA 1 cut(s) 436
BcnI CCSGG 3 cut(s) 277, 446, 478
BcoDI GTCTC 1 cut(s) 343
BcuI ACTAGT 2 cut(s) 22, 1007
BfaI CTAG 3 cut(s) 23, 581, 1008
BfmI CTRYAG 1 cut(s) 1040
BfoI RGCGCY 1 cut(s) 325
BfuI GTATCC 3 cut(s) 291, 580, 837
BglII AGATCT 2 cut(s) 231, 408
Bme1390I CCNGG 4 cut(s) 277, 446, 478, 942
Bme18I GGWCC 2 cut(s) 49, 901
BmeT110I CYCGRG 1 cut(s) 308
BmgBI CACGTC 1 cut(s) 667
BmgT120I GGNCC 4 cut(s) 49, 239, 853, 901
BmiI GGNNCC 6 cut(s) 6, 241, 251, 417, 429, 903
BmrFI CCNGG 4 cut(s) 277, 446, 478, 942
BmsI GCATC 3 cut(s) 72, 150, 228
BpiI GAAGAC 2 cut(s) 346, 569
BpmI CTGGAG 1 cut(s) 836
Bpu14I TTCGAA 2 cut(s) 704, 896
BpuEI CTTGAG 2 cut(s) 245, 1031
BpuMI CCSGG 3 cut(s) 277, 446, 478
Bsa29I ATCGAT 2 cut(s) 144, 198
BsaBI GATNNNNATC 1 cut(s) 926
BsaHI GRCGYC 1 cut(s) 351
BsaI GGTCTC 1 cut(s) 343
BsaJI CCNNGG 3 cut(s) 561, 625, 941
BsaWI WCCGGW 2 cut(s) 46, 490
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 631
Bse118I RCCGGY 2 cut(s) 46, 430
Bse1I ACTGG 4 cut(s) 251, 516, 670, 1068
Bse8I GATNNNNATC 1 cut(s) 926
BseBI CCWGG 1 cut(s) 942
BseCI ATCGAT 2 cut(s) 144, 198
BseDI CCNNGG 3 cut(s) 561, 625, 941
BseGI GGATG 3 cut(s) 102, 222, 1015
BseJI GATNNNNATC 1 cut(s) 926
BseLI CCNNNNNNNGG 2 cut(s) 334, 631
BseNI ACTGG 4 cut(s) 251, 516, 670, 1068
BseRI GAGGAG 3 cut(s) 107, 801, 842
BseSI GKGCMC 1 cut(s) 420
BseXI GCAGC 7 cut(s) 53, 534, 594, 678, 1023, 1026, 1054
Bsh1236I CGCG 3 cut(s) 379, 653, 849
BshFI GGCC 3 cut(s) 240, 476, 855
BshNI GGYRCC 2 cut(s) 415, 427
BshTI ACCGGT 1 cut(s) 46
BshVI ATCGAT 2 cut(s) 144, 198
BsiHKAI GWGCWC 1 cut(s) 666
BsiHKCI CYCGRG 1 cut(s) 308
BsiSI CCGG 7 cut(s) 47, 277, 431, 446, 477, 491, 695
BslFI GGGAC 4 cut(s) 137, 191, 259, 582
BslI CCNNNNNNNGG 2 cut(s) 334, 631
BsmAI GTCTC 1 cut(s) 343
BsmFI GGGAC 4 cut(s) 137, 191, 259, 582
BsnI GGCC 3 cut(s) 240, 476, 855
Bso31I GGTCTC 1 cut(s) 343
BsoBI CYCGRG 1 cut(s) 308
Bsp119I TTCGAA 2 cut(s) 704, 896
Bsp1286I GDGCHC 2 cut(s) 420, 666
Bsp143I GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
BspANI GGCC 3 cut(s) 240, 476, 855
BspDI ATCGAT 2 cut(s) 144, 198
BspFNI CGCG 3 cut(s) 379, 653, 849
BspHI TCATGA 1 cut(s) 790
BspLI GGNNCC 6 cut(s) 6, 241, 251, 417, 429, 903
BspMAI CTGCAG 1 cut(s) 1044
BspPI GGATC 2 cut(s) 12, 788
BspT104I TTCGAA 2 cut(s) 704, 896
BspT107I GGYRCC 2 cut(s) 415, 427
BspTNI GGTCTC 1 cut(s) 343
BsrBI CCGCTC 1 cut(s) 712
BsrFI RCCGGY 2 cut(s) 46, 430
BsrI ACTGG 4 cut(s) 251, 516, 670, 1068
BssAI RCCGGY 2 cut(s) 46, 430
BssECI CCNNGG 3 cut(s) 561, 625, 941
BssMI GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
BssNI GRCGYC 1 cut(s) 351
BssSI CACGAG 1 cut(s) 536
BssT1I CCWWGG 1 cut(s) 561
Bst2BI CACGAG 1 cut(s) 536
Bst2UI CCWGG 1 cut(s) 942
Bst4CI ACNGT 1 cut(s) 615
Bst6I CTCTTC 1 cut(s) 833
BstACI GRCGYC 1 cut(s) 351
BstBI TTCGAA 2 cut(s) 704, 896
BstC8I GCNNGC 1 cut(s) 972
BstDEI CTNAG 1 cut(s) 465
BstDSI CCRYGG 1 cut(s) 625
BstEII GGTNACC 1 cut(s) 715
BstF5I GGATG 3 cut(s) 102, 222, 1015
BstFNI CGCG 3 cut(s) 379, 653, 849
BstH2I RGCGCY 1 cut(s) 325
BstHHI GCGC 2 cut(s) 324, 573
BstKTI GATC 8 cut(s) 7, 198, 202, 234, 411, 439, 796, 924
BstMAI GTCTC 1 cut(s) 343
BstMBI GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
BstMWI GCNNNNNNNGC 4 cut(s) 688, 997, 1033, 1042
BstNI CCWGG 1 cut(s) 942
BstNSI RCATGY 1 cut(s) 974
BstPI GGTNACC 1 cut(s) 715
BstSCI CCNGG 4 cut(s) 275, 444, 476, 940
BstSFI CTRYAG 1 cut(s) 1040
BstSLI GKGCMC 1 cut(s) 420
BstUI CGCG 3 cut(s) 379, 653, 849
BstV1I GCAGC 7 cut(s) 53, 534, 594, 678, 1023, 1026, 1054
BstV2I GAAGAC 2 cut(s) 346, 569
BstX2I RGATCY 3 cut(s) 4, 231, 408
BstYI RGATCY 3 cut(s) 4, 231, 408
Bsu15I ATCGAT 2 cut(s) 144, 198
BsuI GTATCC 3 cut(s) 291, 580, 837
BsuRI GGCC 3 cut(s) 240, 476, 855
BsuTUI ATCGAT 2 cut(s) 144, 198
BtgI CCRYGG 1 cut(s) 625
BtrI CACGTC 1 cut(s) 667
BtsCI GGATG 3 cut(s) 102, 222, 1015
BtsIMutI CAGTG 2 cut(s) 244, 677
Cac8I GCNNGC 1 cut(s) 972
CciI TCATGA 1 cut(s) 790
CfoI GCGC 2 cut(s) 324, 573
Cfr10I RCCGGY 2 cut(s) 46, 430
Cfr13I GGNCC 4 cut(s) 49, 239, 853, 901
ClaI ATCGAT 2 cut(s) 144, 198
CpoI CGGWCCG 1 cut(s) 49
CseI GACGC 2 cut(s) 368, 664
Csp6I GTAC 1 cut(s) 70
CspAI ACCGGT 1 cut(s) 46
CspI CGGWCCG 1 cut(s) 49
CviAII CATG 5 cut(s) 125, 343, 791, 883, 971
CviQI GTAC 1 cut(s) 70
DdeI CTNAG 1 cut(s) 465
DpnI GATC 8 cut(s) 6, 197, 201, 233, 410, 438, 795, 923
DpnII GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
EaeI YGGCCR 1 cut(s) 474
Eam1104I CTCTTC 1 cut(s) 833
EarI CTCTTC 1 cut(s) 833
Eco130I CCWWGG 1 cut(s) 561
Eco31I GGTCTC 1 cut(s) 343
Eco32I GATATC 1 cut(s) 756
Eco47I GGWCC 2 cut(s) 49, 901
Eco88I CYCGRG 1 cut(s) 308
Eco91I GGTNACC 1 cut(s) 715
EcoO109I RGGNCCY 1 cut(s) 901
EcoO65I GGTNACC 1 cut(s) 715
EcoRII CCWGG 1 cut(s) 940
EcoRV GATATC 1 cut(s) 756
EcoT14I CCWWGG 1 cut(s) 561
ErhI CCWWGG 1 cut(s) 561
FaeI CATG 5 cut(s) 128, 346, 794, 886, 974
FaiI YATR 8 cut(s) 126, 344, 780, 792, 884, 948, 966, 972
FalI AAGNNNNNCTT 2 cut(s) 723, 755
FaqI GGGAC 4 cut(s) 137, 191, 259, 582
FatI CATG 5 cut(s) 124, 342, 790, 882, 970
FauI CCCGC 3 cut(s) 312, 623, 705
FbaI TGATCA 1 cut(s) 436
FokI GGATG 3 cut(s) 89, 209, 1002
FspBI CTAG 3 cut(s) 23, 581, 1008
FspI TGCGCA 1 cut(s) 572
GlaI GCGC 2 cut(s) 323, 572
GsuI CTGGAG 1 cut(s) 836
HaeII RGCGCY 1 cut(s) 325
HaeIII GGCC 3 cut(s) 240, 476, 855
HapII CCGG 7 cut(s) 47, 277, 431, 446, 477, 491, 695
HgaI GACGC 2 cut(s) 368, 664
HhaI GCGC 2 cut(s) 324, 573
Hin1I GRCGYC 1 cut(s) 351
Hin1II CATG 5 cut(s) 128, 346, 794, 886, 974
Hin6I GCGC 2 cut(s) 322, 571
HinP1I GCGC 2 cut(s) 322, 571
HinfI GANTC 6 cut(s) 32, 170, 311, 893, 994, 1076
HpaII CCGG 7 cut(s) 47, 277, 431, 446, 477, 491, 695
HphI GGTGA 2 cut(s) 505, 727
Hpy188I TCNGA 3 cut(s) 31, 37, 1081
Hpy188III TCNNGA 5 cut(s) 132, 299, 791, 800, 815
Hpy99I CGWCG 2 cut(s) 57, 353
HpyAV CCTTC 7 cut(s) 85, 109, 220, 443, 700, 892, 1052
HpyCH4III ACNGT 1 cut(s) 615
HpyCH4IV ACGT 2 cut(s) 351, 666
HpyCH4V TGCA 4 cut(s) 219, 500, 610, 1042
HpyF10VI GCNNNNNNNGC 4 cut(s) 688, 997, 1033, 1042
HpyF3I CTNAG 1 cut(s) 465
HpySE526I ACGT 2 cut(s) 351, 666
Hsp92I GRCGYC 1 cut(s) 351
Hsp92II CATG 5 cut(s) 128, 346, 794, 886, 974
HspAI GCGC 2 cut(s) 322, 571
Ksp22I TGATCA 1 cut(s) 436
Kzo9I GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
LmnI GCTCC 3 cut(s) 661, 709, 1033
Lsp1109I GCAGC 7 cut(s) 53, 534, 594, 678, 1023, 1026, 1054
LweI GCATC 3 cut(s) 72, 150, 228
MaeI CTAG 3 cut(s) 23, 581, 1008
MaeII ACGT 2 cut(s) 351, 666
MaeIII GTNAC 3 cut(s) 18, 647, 715
MalI GATC 8 cut(s) 6, 197, 201, 233, 410, 438, 795, 923
MbiI CCGCTC 1 cut(s) 712
MboI GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
MflI RGATCY 3 cut(s) 4, 231, 408
MhlI GDGCHC 2 cut(s) 420, 666
MluCI AATT 3 cut(s) 368, 760, 953
MluI ACGCGT 1 cut(s) 847
MlyI GAGTC 2 cut(s) 320, 1085
MmeI TCCRAC 1 cut(s) 462
MspI CCGG 7 cut(s) 47, 277, 431, 446, 477, 491, 695
MspR9I CCNGG 4 cut(s) 277, 446, 478, 942
MvaI CCWGG 1 cut(s) 942
MvnI CGCG 3 cut(s) 379, 653, 849
MwoI GCNNNNNNNGC 4 cut(s) 688, 997, 1033, 1042
NciI CCSGG 3 cut(s) 277, 446, 478
NdeII GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
NlaIII CATG 5 cut(s) 128, 346, 794, 886, 974
NlaIV GGNNCC 6 cut(s) 6, 241, 251, 417, 429, 903
NmuCI GTSAC 2 cut(s) 18, 715
NsbI TGCGCA 1 cut(s) 572
NspI RCATGY 1 cut(s) 974
NspV TTCGAA 2 cut(s) 704, 896
PaeI GCATGC 1 cut(s) 974
PagI TCATGA 1 cut(s) 790
PcsI WCGNNNNNNNCGW 1 cut(s) 672
PfeI GAWTC 4 cut(s) 32, 170, 893, 994
PinAI ACCGGT 1 cut(s) 46
PleI GAGTC 2 cut(s) 319, 1084
PpsI GAGTC 2 cut(s) 319, 1084
PpuMI RGGWCCY 1 cut(s) 901
Psp5II RGGWCCY 1 cut(s) 901
Psp6I CCWGG 1 cut(s) 940
PspEI GGTNACC 1 cut(s) 715
PspGI CCWGG 1 cut(s) 940
PspN4I GGNNCC 6 cut(s) 6, 241, 251, 417, 429, 903
PspPI GGNCC 4 cut(s) 49, 239, 853, 901
PspPPI RGGWCCY 1 cut(s) 901
PstI CTGCAG 1 cut(s) 1044
PsuI RGATCY 3 cut(s) 4, 231, 408
RsaI GTAC 1 cut(s) 71
RsaNI GTAC 1 cut(s) 70
Rsr2I CGGWCCG 1 cut(s) 49
RsrII CGGWCCG 1 cut(s) 49
Sau3AI GATC 8 cut(s) 4, 195, 199, 231, 408, 436, 793, 921
Sau96I GGNCC 4 cut(s) 49, 239, 853, 901
SchI GAGTC 2 cut(s) 320, 1085
ScrFI CCNGG 4 cut(s) 277, 446, 478, 942
SduI GDGCHC 2 cut(s) 420, 666
SfaNI GCATC 3 cut(s) 72, 150, 228
SfcI CTRYAG 1 cut(s) 1040
SfuI TTCGAA 2 cut(s) 704, 896
SinI GGWCC 2 cut(s) 49, 901
SmlI CTYRAG 2 cut(s) 260, 1046
SmoI CTYRAG 2 cut(s) 260, 1046
SpeI ACTAGT 2 cut(s) 22, 1007
SphI GCATGC 1 cut(s) 974
Sse9I AATT 3 cut(s) 368, 760, 953
SspMI CTAG 3 cut(s) 23, 581, 1008
StyD4I CCNGG 4 cut(s) 275, 444, 476, 940
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 1 cut(s) 615
TaiI ACGT 2 cut(s) 354, 669
TasI AATT 3 cut(s) 368, 760, 953
TauI GCSGC 3 cut(s) 362, 379, 836
TfiI GAWTC 4 cut(s) 32, 170, 893, 994
TscAI CASTG 2 cut(s) 251, 677
TseFI GTSAC 2 cut(s) 18, 715
TseI GCWGC 7 cut(s) 41, 522, 607, 691, 1036, 1039, 1042
Tsp45I GTSAC 2 cut(s) 18, 715
TspDTI ATGAA 1 cut(s) 91
TspGWI ACGGA 2 cut(s) 41, 732
TspRI CASTG 2 cut(s) 251, 677
VpaK11BI GGWCC 2 cut(s) 49, 901
XapI RAATTY 1 cut(s) 760
XceI RCATGY 1 cut(s) 974
XspI CTAG 3 cut(s) 23, 581, 1008
ZraI GACGTC 1 cut(s) 352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.